HHsearch alignment for GI: 254780489 and conserved domain: TIGR00747

>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III; InterPro: IPR004655 Beta-ketoacyl-acyl carrier protein synthase III (FabH), in general, initiates elongation in type II fatty acid synthase systems found in bacteria and plants. It is responsible for producing the multitude of fatty acid structures found in bacterial membranes . The two members of this subfamily from Bacillus subtilis differ from each other, and from FabH from Escherichia coli, in acyl group specificity. Active site residues include Cys112, His244 and Asn274 of Escherichia coli FabH. Cys-112 is the site of acyl group attachment. ; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process.
Probab=100.00  E-value=0  Score=642.27  Aligned_cols=321  Identities=33%  Similarity=0.552  Sum_probs=308.1

Q ss_pred             CEEEEEEEEECCCCCCCHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
Q ss_conf             20999999735886138889998809997683111475088994898879999999999986430132223442588431
Q gi|254780489|r    5 SSCILGFGHAVPNQCIHNSIIERHLNLKLGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTLLATS   84 (325)
Q Consensus         5 ~~~I~g~g~~lP~~~i~n~~l~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~   84 (325)
T Consensus         2 ~~~i~g~G~YlP~~v~tNadL~k~vDTSDEWI~TRTGI~eRRiAad~E~~S~mg~~AA~~Aie~A~i~~~dID~iivaT~   81 (329)
T TIGR00747         2 KAKILGTGSYLPEKVLTNADLEKMVDTSDEWIVTRTGIKERRIAADDETSSHMGFEAAKKAIENAGISKDDIDLIIVATT   81 (329)
T ss_pred             EEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECC
T ss_conf             35789860307751357333453210683311236861000214720126899999999999852788668786798057


Q ss_pred             EECC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCEEEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf             0023-68874322112100238633342101231012567657887438-850588620122444462224434325442
Q gi|254780489|r   85 TPDH-LLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYINSH-QKPVLIIAANLLSRRINLEDKDTAIIFGDA  162 (325)
Q Consensus        85 t~d~-~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~g-~~~vLVv~~e~~S~~~d~~d~~~~~lfGDg  162 (325)
T Consensus        82 ~pd~l~fPS~Ac~~~~~LGi~~~~aFD~~AACaGF~Y~Ls~A~~~i~SG~y~~vLvvGaeklSs~~D~~DR~TcvLFGDG  161 (329)
T TIGR00747        82 TPDYLAFPSAACMVQAYLGIKNIPAFDLSAACAGFIYGLSVAKQYIESGKYKTVLVVGAEKLSSTLDWTDRGTCVLFGDG  161 (329)
T ss_pred             CCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCC
T ss_conf             80000377858999976186676322236567668999999999861577026889985110553674668757996067


Q ss_pred             EEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCC--CCCCCCCCCCHHHHHHHCCCHHHHHHHHHHH
Q ss_conf             00112205765444531135532136776527830698667654455--6552322451454343201003678988997
Q gi|254780489|r  163 AGAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNT--HDFYMRITNGADIFYNAVKIMAQSAKQSLRK  240 (325)
Q Consensus       163 A~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~  240 (325)
T Consensus       162 AgA~v~g~s~~~~~~eI~~~~l~AdG~~~~~L~l~~~~~~~P~~~~~~~~~~~f~~M~G~evFk~Av~~m~~~~~~~l~~  241 (329)
T TIGR00747       162 AGAVVVGESEDDGGLEIISTNLGADGTQGELLYLPAGGRRCPFSKNTLQGSSPFITMEGNEVFKHAVRKMLKVVEETLEA  241 (329)
T ss_pred             CEEEEEECCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             22688704578776301234653056443213206777668877773446666178737325889999999999999997


Q ss_pred             HCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHH-CCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
Q ss_conf             40120012246305654138999999719786570021854-09330005999999999806789998999998615510
Q gi|254780489|r  241 SDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNSLKD-FGNSSSASIPLSLSLENQRKPFQKGEKILTISCRRGND  319 (325)
Q Consensus       241 ~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~l~~-~GN~~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~G~s  319 (325)
T Consensus       242 a~l~~~DiD~lvPHQAN~RIi~a~ak~L~~~~~~Vv~Tv~khyGNTSAASiP~AL~E~~~~G~iK~Gd~~LL~AFGGGLt  321 (329)
T TIGR00747       242 AGLSKEDIDWLVPHQANIRIIEALAKRLELKESKVVKTVHKHYGNTSAASIPIALDELLETGRIKKGDLLLLVAFGGGLT  321 (329)
T ss_pred             HCCCHHHCCEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHHHH
T ss_conf             18783046155554111689999999708980316863200134630434667899987417777244888763060356


Q ss_pred             CCCCCC
Q ss_conf             201019
Q gi|254780489|r  320 RGIYCL  325 (325)
Q Consensus       320 ~ga~lL  325 (325)
T Consensus       322 WGa~~v  327 (329)
T TIGR00747       322 WGAALV  327 (329)
T ss_pred             HHHHHH
T ss_conf             677752