HHsearch alignment for GI: 254780489 and conserved domain: TIGR02845
>TIGR02845 spore_V_AD stage V sporulation protein AD; InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation ..
Probab=94.37 E-value=0.095 Score=31.31 Aligned_cols=80 Identities=25% Similarity=0.407 Sum_probs=46.4
Q ss_pred CHHHHHHHC-CCHHHHHHHHHHHHCCCCC--CCCEEEECC-CCCHHH-HHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHH
Q ss_conf 145434320-1003678988997401200--122463056-541389-99999719786570021854093300059999
Q gi|254780489|r 219 GADIFYNAV-KIMAQSAKQSLRKSDLQPQ--DINRFIPHQ-ANSRII-QKVCEKIGLSKRIMVNSLKDFGNSSSASIPLS 293 (325)
Q Consensus 219 g~~v~~~~~-~~~~~~i~~~l~~~gl~~~--did~~i~Hq-~~~~~~-~~~~~~lgi~~~~~~~~l~~~GN~~sAsi~~~ 293 (325)
T Consensus 42 ge~SwEkAEr~lm~~Av~~aL~Ka~l~~~PP~vD~~LAGDLLNQ~~~anFvAR~L~iP---f---lGLygACsTs~E~L~ 115 (331)
T TIGR02845 42 GEDSWEKAERKLMEDAVNLALKKANLKKDPPDVDFFLAGDLLNQIITANFVARELGIP---F---LGLYGACSTSMETLA 115 (331)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC---C---EECCCHHHHHHHHHH
T ss_conf 7201899999999999999875358712787211120103666789998988745888---2---340213578999999
Q ss_pred HHHHHHHCCCC
Q ss_conf 99999806789
Q gi|254780489|r 294 LSLENQRKPFQ 304 (325)
Q Consensus 294 L~~~~~~g~i~ 304 (325)
T Consensus 116 ~gA~lv~GGfA 126 (331)
T TIGR02845 116 LGAMLVDGGFA 126 (331)
T ss_pred HHHHHHHCCCH
T ss_conf 99999832002