HHsearch alignment for GI: 254780489 and conserved domain: cd00751

>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.63  E-value=6.5e-15  Score=117.33  Aligned_cols=98  Identities=15%  Similarity=0.137  Sum_probs=85.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             9887999999999998643013222344258843100236887432211210023-863334210123101256765788
Q gi|254780489|r   50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADSY  128 (325)
Q Consensus        50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~~  128 (325)
T Consensus        18 ~~~~~~~L~~~ai~~al~~agl~~~~Id~vi~G~~~~~g~g~n~aR~~al~aGlp~~vp~~tV~~aCaSG~~Ai~~A~~~   97 (386)
T cd00751          18 KDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVNRVCGSGLQAVALAAQS   97 (386)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHH
T ss_conf             88989999999999999984989899998999950666656639999999769998886588842216879999999741


Q ss_pred             HHCC-CCEEEEEEECCCCCC
Q ss_conf             7438-850588620122444
Q gi|254780489|r  129 INSH-QKPVLIIAANLLSRR  147 (325)
Q Consensus       129 i~~g-~~~vLVv~~e~~S~~  147 (325)
T Consensus        98 I~sG~~dvvla~GvEsmS~~  117 (386)
T cd00751          98 IAAGEADVVVAGGVESMSRA  117 (386)
T ss_pred             HCCCCCCEEEEECCCCCCCC
T ss_conf             10799778887244535657