HHsearch alignment for GI: 254780489 and conserved domain: cd00751
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=92.73 E-value=0.34 Score=27.71 Aligned_cols=80 Identities=15% Similarity=0.102 Sum_probs=51.3
Q ss_pred HHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHH--HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEE
Q ss_conf 6789889974012001224630565413899999971978657002--18540933000599999999980678999899
Q gi|254780489|r 232 QSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVN--SLKDFGNSSSASIPLSLSLENQRKPFQKGEKI 309 (325)
Q Consensus 232 ~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~--~l~~~GN~~sAsi~~~L~~~~~~g~i~~Gd~v 309 (325)
T Consensus 289 ~A~~~al~~agl~~~Did~~EiheaFa~~~l~~~~~lg~~~~~vN~~GG~ia~GHP~GATG~~~~~~l~~~L~~~~g~~g 368 (386)
T cd00751 289 PAIPKALKRAGLTLDDIDLIEINEAFAAQALACLKELGLDPEKVNVNGGAIALGHPLGASGARIVVTLLHELKRRGGRYG 368 (386)
T ss_pred HHHHHHHHHCCCCHHHCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEE
T ss_conf 99999999839984448843510566878999999829877667888559860998021589999999999988389889
Q ss_pred EE
Q ss_conf 99
Q gi|254780489|r 310 LT 311 (325)
Q Consensus 310 ll 311 (325)
T Consensus 369 l~ 370 (386)
T cd00751 369 LA 370 (386)
T ss_pred EE
T ss_conf 99