HHsearch alignment for GI: 254780489 and conserved domain: cd00827
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00 E-value=0 Score=453.16 Aligned_cols=317 Identities=26% Similarity=0.334 Sum_probs=272.5
Q ss_pred CEEEEEEEEECCCCCCCHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
Q ss_conf 20999999735886138889998809997683111475088994898879999999999986430132223442588431
Q gi|254780489|r 5 SSCILGFGHAVPNQCIHNSIIERHLNLKLGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTLLATS 84 (325)
Q Consensus 5 ~~~I~g~g~~lP~~~i~n~~l~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~ 84 (325)
T Consensus 1 ~v~I~~~g~y~P~~~v~~~~~~~~~~~~--~~~~~~Gi~~r~~a~~~e~~~~ma~~Aa~~aL~~a~~~~~~Idlli~~s~ 78 (324)
T cd00827 1 DVGIEAIGAYLPRYRVDNEELAEGLGVD--PGKYTTGIGQRHMAGDDEDVPTMAVEAARRALERAGIDPDDIGLLIVATE 78 (324)
T ss_pred CCCEEEEEEECCCCEECHHHHHHHHCCH--HHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECC
T ss_conf 9368799997899479599999884952--76502470389967999999999999999999984989889979999325
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCEEEEEEECCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 002368874322112100238633342101231012567657887438-8505886201224444622244343254420
Q gi|254780489|r 85 TPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYINSH-QKPVLIIAANLLSRRINLEDKDTAIIFGDAA 163 (325)
Q Consensus 85 t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~g-~~~vLVv~~e~~S~~~d~~d~~~~~lfGDgA 163 (325)
T Consensus 79 ~~~~~~p~~a~~i~~~Lgl~~~~~~di~~~C~g~~~aL~~A~~~l~~g~~~~~LVv~~e~~s~~~~~~~~-~~~~~GDgA 157 (324)
T cd00827 79 SPIDKGKSAATYLAELLGLTNAEAFDLKQACYGGTAALQLAANLVESGPWRYALVVASDIASYLLDEGSA-LEPTLGDGA 157 (324)
T ss_pred CCCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHCCCCCCCCC-CCCCCCCCC
T ss_conf 7786797499999998589997188601422047999999998875487651478740110124677987-664457722
Q ss_pred EEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCC-CCCCCHHHHHHHCCCHHHHHHHHHHHHC
Q ss_conf 011220576544453113553213677652783069866765445565523-2245145434320100367898899740
Q gi|254780489|r 164 GAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYM-RITNGADIFYNAVKIMAQSAKQSLRKSD 242 (325)
Q Consensus 164 ~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~v~~~~~~~~~~~i~~~l~~~g 242 (325)
T Consensus 158 aA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 237 (324)
T cd00827 158 AAMLVSRNPGILAAGIVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKALDRAG 237 (324)
T ss_pred EEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 89998227865555403677501566544444567888777543210022224441789999999999999999999849
Q ss_pred CCCCCCCEEEECCCCC-HHHHHHHHHCCCCHHHH----HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCC
Q ss_conf 1200122463056541-38999999719786570----021854093300059999999998067899989999986155
Q gi|254780489|r 243 LQPQDINRFIPHQANS-RIIQKVCEKIGLSKRIM----VNSLKDFGNSSSASIPLSLSLENQRKPFQKGEKILTISCRRG 317 (325)
Q Consensus 243 l~~~did~~i~Hq~~~-~~~~~~~~~lgi~~~~~----~~~l~~~GN~~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~G 317 (325)
T Consensus 238 ~~-~~~~~~~~hq~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sasi~~~L~~~l~~g~l~~Gd~vll~~~G~G 316 (324)
T cd00827 238 LS-EDIDYFVPHQPNGKKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGLASLLESGKLKAGDRVLLFSYGSG 316 (324)
T ss_pred CC-HHHHHEEECCCCHHHHHHHHHHHCCCCHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHH
T ss_conf 97-54412432576378999999998399656513516465168414489899999999997299998499999999068
Q ss_pred CCCCCCCC
Q ss_conf 10201019
Q gi|254780489|r 318 NDRGIYCL 325 (325)
Q Consensus 318 ~s~ga~lL 325 (325)
T Consensus 317 ~s~~~~vl 324 (324)
T cd00827 317 FTAEAFVL 324 (324)
T ss_pred HHHHHECC
T ss_conf 31551119