Query gi|254780489|ref|YP_003064902.1| 3-oxoacyl-(acyl carrier protein) synthase II [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 325
No_of_seqs 142 out of 3736
Neff 8.2
Searched_HMMs 39220
Date Sun May 29 17:24:05 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780489.hhm -d /home/congqian_1/database/cdd/Cdd.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00747 fabH 3-oxoacyl-(acyl 100.0 0 0 642.3 19.4 321 5-325 2-327 (329)
2 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 0 0 578.3 22.9 318 4-325 2-320 (323)
3 PRK05963 3-oxoacyl-(acyl carri 100.0 0 0 567.9 24.5 321 4-325 3-325 (327)
4 PRK09352 3-oxoacyl-(acyl carri 100.0 0 0 566.9 24.8 314 5-325 3-317 (319)
5 PRK07204 3-oxoacyl-(acyl carri 100.0 0 0 558.2 23.8 321 2-325 1-327 (329)
6 PRK07515 3-oxoacyl-(acyl carri 100.0 0 0 560.7 20.5 316 4-325 1-369 (372)
7 PRK12879 3-oxoacyl-(acyl carri 100.0 0 0 552.5 24.5 322 2-325 1-323 (326)
8 CHL00203 fabH 3-oxoacyl-acyl-c 100.0 0 0 550.5 24.8 318 6-325 1-323 (327)
9 cd00830 KAS_III Ketoacyl-acyl 100.0 0 0 545.9 26.1 319 5-325 1-320 (320)
10 PRK12880 3-oxoacyl-(acyl carri 100.0 0 0 548.6 22.4 314 4-325 6-336 (353)
11 PRK06816 3-oxoacyl-(acyl carri 100.0 0 0 543.7 22.0 321 5-325 2-375 (378)
12 PRK06840 hypothetical protein; 100.0 0 0 534.7 23.2 321 2-325 1-333 (337)
13 PRK09258 3-oxoacyl-(acyl carri 100.0 0 0 534.0 21.4 311 6-325 1-337 (339)
14 PRK04262 hypothetical protein; 100.0 0 0 459.9 22.9 301 5-325 2-306 (346)
15 cd00827 init_cond_enzymes "ini 100.0 0 0 453.2 22.5 317 5-325 1-324 (324)
16 cd00831 CHS_like Chalcone and 100.0 0 0 445.4 22.0 314 5-325 1-361 (361)
17 COG3425 PksG 3-hydroxy-3-methy 100.0 2.1E-42 0 297.0 18.8 300 4-323 1-306 (377)
18 COG3424 BcsA Predicted naringe 100.0 4.7E-41 1.4E-45 288.2 18.4 311 6-325 2-350 (356)
19 cd00327 cond_enzymes Condensin 100.0 5.7E-39 1.4E-43 274.6 12.7 239 49-325 2-254 (254)
20 TIGR00748 HMG_CoA_syn_Arc hydr 100.0 3.5E-32 8.9E-37 230.2 11.7 300 6-324 2-306 (347)
21 TIGR01835 HMG-CoA-S_prok hydro 100.0 5.2E-30 1.3E-34 216.0 10.3 297 7-320 2-339 (412)
22 pfam00195 Chal_sti_synt_N Chal 99.9 2E-27 5.2E-32 199.1 9.8 166 6-172 17-228 (228)
23 TIGR01833 HMG-CoA-S_euk hydrox 99.9 6.7E-22 1.7E-26 163.0 14.0 307 2-324 1-375 (461)
24 pfam08541 ACP_syn_III_C 3-Oxoa 99.9 3.6E-23 9.1E-28 171.3 6.3 88 238-325 1-88 (90)
25 KOG1393 consensus 99.9 2.5E-20 6.3E-25 152.7 15.4 302 5-325 11-374 (462)
26 pfam01154 HMG_CoA_synt_N Hydro 99.9 4.9E-21 1.3E-25 157.3 11.3 163 5-171 1-169 (171)
27 pfam08392 FAE1_CUT1_RppA FAE1/ 99.8 6.3E-18 1.6E-22 137.0 12.4 171 3-174 6-209 (290)
28 cd00829 SCP-x_thiolase Thiolas 99.7 1.1E-16 2.9E-21 128.8 13.1 202 50-273 12-296 (375)
29 cd00825 decarbox_cond_enzymes 99.7 3.4E-16 8.7E-21 125.7 11.2 244 54-324 11-331 (332)
30 pfam02797 Chal_sti_synt_C Chal 99.7 1.8E-16 4.6E-21 127.5 8.6 117 209-325 21-147 (151)
31 pfam08545 ACP_syn_III 3-Oxoacy 99.6 2E-16 5.1E-21 127.2 5.8 79 109-188 1-80 (80)
32 PRK12578 acetyl-CoA acetyltran 99.6 2E-14 5.2E-19 114.1 15.4 226 50-299 17-348 (385)
33 cd00751 thiolase Thiolase are 99.6 6.5E-15 1.7E-19 117.3 12.4 98 50-147 18-117 (386)
34 PRK06064 acetyl-CoA acetyltran 99.6 6.6E-15 1.7E-19 117.3 12.4 201 50-272 18-302 (389)
35 PRK06059 lipid-transfer protei 99.6 4.5E-14 1.1E-18 111.9 15.8 257 51-322 20-393 (399)
36 PRK08256 lipid-transfer protei 99.6 3.8E-14 9.6E-19 112.4 14.9 197 50-273 18-309 (391)
37 PRK08235 acetyl-CoA acetyltran 99.6 1.7E-14 4.2E-19 114.7 12.5 98 50-147 22-121 (393)
38 PRK06333 3-oxoacyl-(acyl carri 99.6 3.9E-14 1E-18 112.2 13.7 274 1-303 1-372 (424)
39 cd00834 KAS_I_II Beta-ketoacyl 99.6 3.6E-14 9.1E-19 112.5 13.4 274 4-304 1-361 (406)
40 PRK06364 consensus 99.6 5.9E-14 1.5E-18 111.1 13.8 202 50-273 21-308 (389)
41 TIGR02845 spore_V_AD stage V s 99.6 1.4E-14 3.7E-19 115.1 9.8 259 3-319 7-311 (331)
42 PRK07800 consensus 99.6 4.8E-14 1.2E-18 111.7 12.5 98 50-147 22-121 (393)
43 PRK07516 acetyl-CoA acetyltran 99.6 1.2E-13 3.2E-18 109.0 14.4 96 50-146 18-117 (389)
44 PRK06157 acetyl-CoA acetyltran 99.6 3.2E-13 8.3E-18 106.2 16.2 229 50-300 23-360 (400)
45 PRK06289 acetyl-CoA acetyltran 99.6 2.1E-13 5.4E-18 107.4 15.0 101 45-145 17-121 (408)
46 PRK07314 3-oxoacyl-(acyl carri 99.6 1.3E-13 3.2E-18 108.9 13.8 274 3-303 1-361 (411)
47 PRK08722 3-oxoacyl-(acyl carri 99.6 1.1E-13 2.7E-18 109.4 13.3 265 1-292 1-350 (414)
48 PRK08313 acetyl-CoA acetyltran 99.6 1.2E-12 3E-17 102.6 17.9 221 1-272 1-304 (391)
49 PRK05790 acetyl-CoA acetyltran 99.6 9.1E-14 2.3E-18 109.8 11.7 98 50-147 22-121 (393)
50 PRK06845 consensus 99.5 1.4E-13 3.5E-18 108.7 12.6 98 50-147 22-122 (392)
51 PRK06363 consensus 99.5 1.4E-13 3.6E-18 108.6 12.3 200 51-272 19-302 (387)
52 PRK06065 acetyl-CoA acetyltran 99.5 7.2E-13 1.8E-17 104.0 15.4 227 50-300 26-357 (393)
53 cd00826 nondecarbox_cond_enzym 99.5 2.1E-13 5.3E-18 107.5 12.6 96 51-146 20-117 (393)
54 PRK08768 consensus 99.5 3.2E-13 8.2E-18 106.3 13.1 274 2-303 1-362 (411)
55 PRK06158 thiolase; Provisional 99.5 9E-13 2.3E-17 103.3 15.1 196 50-272 24-298 (384)
56 PRK06365 acetyl-CoA acetyltran 99.5 2.2E-12 5.6E-17 100.8 16.8 241 50-298 19-371 (415)
57 PRK07801 acetyl-CoA acetyltran 99.5 5.1E-13 1.3E-17 105.0 12.7 98 50-147 22-122 (382)
58 PRK07025 consensus 99.5 4.2E-13 1.1E-17 105.5 11.4 98 50-147 22-121 (393)
59 PRK06366 acetyl-CoA acetyltran 99.5 2.6E-13 6.7E-18 106.8 10.4 98 50-147 22-121 (388)
60 PRK06689 consensus 99.5 4.9E-13 1.2E-17 105.1 11.7 98 50-147 22-121 (391)
61 PRK06954 acetyl-CoA acetyltran 99.5 7.3E-13 1.9E-17 103.9 12.5 98 50-147 27-126 (397)
62 PTZ00050 3-oxoacyl-acyl carrie 99.5 1.5E-12 3.8E-17 101.9 14.1 275 3-304 60-425 (477)
63 TIGR03150 fabF 3-oxoacyl-[acyl 99.5 1.4E-12 3.6E-17 102.1 13.5 273 4-303 1-360 (407)
64 PRK07491 consensus 99.5 1.1E-12 2.7E-17 102.8 12.6 98 50-147 23-122 (392)
65 PRK05656 acetyl-CoA acetyltran 99.5 1.4E-12 3.7E-17 102.0 13.1 98 50-147 22-121 (392)
66 PRK06025 acetyl-CoA acetyltran 99.5 2.6E-12 6.6E-17 100.3 14.4 97 50-146 25-124 (417)
67 PRK05952 3-oxoacyl-(acyl carri 99.5 4.6E-12 1.2E-16 98.7 15.6 277 5-319 3-371 (379)
68 PRK07103 polyketide beta-ketoa 99.5 2E-12 5.1E-17 101.1 13.6 269 5-303 8-367 (415)
69 PRK06501 3-oxoacyl-(acyl carri 99.5 4.6E-12 1.2E-16 98.7 15.4 292 1-319 8-414 (425)
70 PRK08041 consensus 99.5 2.1E-12 5.3E-17 101.0 13.2 98 50-147 22-121 (391)
71 PRK08371 consensus 99.5 1.7E-12 4.4E-17 101.5 12.8 199 51-273 19-304 (388)
72 PRK08242 acetyl-CoA acetyltran 99.5 3.9E-12 1E-16 99.2 14.5 98 50-147 24-124 (402)
73 PRK07124 consensus 99.4 1.2E-12 3.1E-17 102.5 10.8 98 50-147 22-121 (402)
74 PRK07851 acetyl-CoA acetyltran 99.4 3.7E-12 9.4E-17 99.3 13.0 98 50-147 23-123 (405)
75 PRK07855 lipid-transfer protei 99.4 3.5E-11 9E-16 92.9 17.5 263 1-325 1-385 (386)
76 PRK09051 beta-ketothiolase; Pr 99.4 4.3E-12 1.1E-16 98.9 12.5 98 50-147 23-123 (394)
77 PRK06504 acetyl-CoA acetyltran 99.4 1.2E-11 3E-16 96.0 14.2 98 50-147 22-122 (390)
78 PRK06445 acetyl-CoA acetyltran 99.4 3.5E-12 8.8E-17 99.5 11.4 98 50-147 28-128 (394)
79 smart00825 PKS_KS Beta-ketoacy 99.4 1.5E-12 3.8E-17 101.9 9.2 222 56-303 89-367 (424)
80 PRK07910 3-oxoacyl-(acyl carri 99.4 1.9E-11 4.8E-16 94.7 14.9 263 3-292 11-355 (418)
81 PRK07108 acetyl-CoA acetyltran 99.4 7.1E-12 1.8E-16 97.5 12.7 98 50-147 23-123 (392)
82 PRK06205 acetyl-CoA acetyltran 99.4 1.1E-11 2.9E-16 96.2 13.5 98 50-147 22-121 (404)
83 PRK08131 acetyl-CoA acetyltran 99.4 3.8E-12 9.6E-17 99.3 11.0 98 50-147 22-122 (401)
84 cd00828 elong_cond_enzymes "el 99.4 1.7E-11 4.4E-16 95.0 14.4 240 54-324 72-406 (407)
85 PRK07850 acetyl-CoA acetyltran 99.4 5.7E-12 1.4E-16 98.1 11.7 98 50-147 22-122 (387)
86 PRK09052 acetyl-CoA acetyltran 99.4 7.2E-12 1.8E-16 97.4 12.0 98 50-147 27-128 (399)
87 PRK08963 fadI 3-ketoacyl-CoA t 99.4 1.7E-11 4.2E-16 95.1 13.1 97 50-146 33-131 (436)
88 PRK08142 acetyl-CoA acetyltran 99.4 2.6E-11 6.5E-16 93.8 13.9 223 50-300 21-348 (388)
89 cd00832 CLF Chain-length facto 99.4 1.1E-11 2.9E-16 96.2 12.0 269 4-304 1-354 (399)
90 PRK08234 consensus 99.4 1.1E-11 2.9E-16 96.1 12.0 98 50-147 22-123 (400)
91 PRK09185 3-oxoacyl-(acyl carri 99.4 6.1E-11 1.6E-15 91.4 15.1 254 1-289 1-327 (395)
92 PRK06633 acetyl-CoA acetyltran 99.4 8.2E-11 2.1E-15 90.5 15.1 97 50-146 23-121 (392)
93 PRK07967 3-oxoacyl-(acyl carri 99.3 7.2E-11 1.8E-15 90.9 14.6 254 5-290 3-338 (406)
94 PRK09116 3-oxoacyl-(acyl carri 99.3 1.9E-11 4.8E-16 94.7 11.4 208 54-292 4-274 (336)
95 PRK08947 fadA 3-ketoacyl-CoA t 99.3 2E-11 5E-16 94.6 11.2 98 50-147 23-124 (387)
96 PRK08170 acetyl-CoA acetyltran 99.3 2.3E-11 5.8E-16 94.2 11.0 98 50-147 23-122 (426)
97 PRK09268 acetyl-CoA acetyltran 99.3 3.8E-11 9.8E-16 92.7 11.7 98 50-147 27-126 (428)
98 cd00833 PKS polyketide synthas 99.3 4.3E-11 1.1E-15 92.4 11.3 222 56-303 89-367 (421)
99 PRK06147 3-oxoacyl-(acyl carri 99.3 4.1E-10 1E-14 86.0 14.8 245 53-325 63-338 (346)
100 PRK07661 acetyl-CoA acetyltran 99.3 1.7E-10 4.3E-15 88.5 12.8 97 50-147 17-116 (384)
101 PRK07937 lipid-transfer protei 99.3 3.7E-10 9.4E-15 86.3 13.8 225 53-310 23-331 (352)
102 PRK08439 3-oxoacyl-(acyl carri 99.3 6.5E-10 1.7E-14 84.6 15.0 268 5-304 3-357 (405)
103 PRK13359 beta-ketoadipyl CoA t 99.2 7.7E-11 2E-15 90.7 10.0 98 50-147 22-123 (400)
104 PRK09050 beta-ketoadipyl CoA t 99.2 4E-10 1E-14 86.0 13.2 98 50-147 22-123 (401)
105 pfam07451 SpoVAD Stage V sporu 99.2 9.2E-10 2.4E-14 83.7 13.3 272 3-319 8-309 (329)
106 PRK06690 acetyl-CoA acetyltran 99.2 4.3E-10 1.1E-14 85.9 10.8 93 50-147 21-115 (361)
107 PRK12404 stage V sporulation p 99.2 1E-09 2.7E-14 83.3 12.6 272 3-319 11-312 (334)
108 PRK06066 acetyl-CoA acetyltran 99.2 1.7E-09 4.2E-14 82.0 13.5 240 50-317 19-369 (375)
109 PRK08304 stage V sporulation p 99.2 1.1E-09 2.8E-14 83.1 12.6 274 3-319 13-314 (336)
110 COG3321 Polyketide synthase mo 99.1 2.3E-09 5.9E-14 81.1 11.6 223 57-305 94-372 (1061)
111 PRK06519 3-oxoacyl-(acyl carri 99.0 2.9E-08 7.3E-13 73.9 14.8 266 1-305 3-361 (397)
112 TIGR01930 AcCoA-C-Actrans acet 98.9 1.7E-09 4.3E-14 81.9 6.1 98 50-147 20-121 (447)
113 COG0304 FabB 3-oxoacyl-(acyl-c 98.9 2.7E-08 6.9E-13 74.1 10.7 212 52-289 69-344 (412)
114 pfam00108 Thiolase_N Thiolase, 98.9 3.4E-09 8.6E-14 80.0 6.0 98 50-147 22-121 (264)
115 PRK08257 acetyl-CoA acetyltran 98.8 3.4E-07 8.8E-12 66.9 12.9 94 51-145 26-121 (502)
116 KOG1390 consensus 98.7 1.9E-07 4.9E-12 68.5 10.6 259 51-320 27-389 (396)
117 pfam00109 ketoacyl-synt Beta-k 98.7 4.8E-08 1.2E-12 72.4 6.7 164 4-171 2-240 (243)
118 KOG1391 consensus 98.7 1.4E-06 3.5E-11 63.0 13.6 94 50-146 24-123 (396)
119 KOG1389 consensus 98.6 4E-07 1E-11 66.4 9.8 269 50-320 57-417 (435)
120 KOG1394 consensus 98.6 7E-07 1.8E-11 64.8 9.4 254 4-285 24-365 (440)
121 KOG1406 consensus 98.5 6.2E-08 1.6E-12 71.7 3.7 91 53-146 28-119 (408)
122 KOG1202 consensus 98.1 2E-05 5.2E-10 55.3 8.9 215 54-297 87-353 (2376)
123 COG0183 PaaJ Acetyl-CoA acetyl 98.1 4.2E-06 1.1E-10 59.8 4.8 95 54-148 27-126 (392)
124 pfam08540 HMG_CoA_synt_C Hydro 98.0 5.6E-05 1.4E-09 52.4 9.2 107 218-324 31-198 (282)
125 KOG1392 consensus 97.4 0.00039 9.9E-09 46.9 5.8 111 36-146 44-160 (465)
126 pfam00195 Chal_sti_synt_N Chal 96.7 0.0087 2.2E-07 38.1 7.0 92 221-315 96-192 (228)
127 PRK06504 acetyl-CoA acetyltran 96.5 0.0093 2.4E-07 37.9 6.0 69 232-300 292-365 (390)
128 PRK06845 consensus 96.4 0.015 3.8E-07 36.6 6.7 58 232-289 294-353 (392)
129 TIGR01930 AcCoA-C-Actrans acet 96.3 0.002 5E-08 42.3 1.9 132 158-318 283-442 (447)
130 PRK13359 beta-ketoadipyl CoA t 96.1 0.024 6E-07 35.3 6.5 70 231-300 299-375 (400)
131 cd00831 CHS_like Chalcone and 96.1 0.029 7.5E-07 34.6 7.0 11 63-73 42-52 (361)
132 PRK06954 acetyl-CoA acetyltran 96.1 0.016 4.2E-07 36.3 5.5 70 231-300 298-372 (397)
133 TIGR02813 omega_3_PfaA polyket 96.1 0.007 1.8E-07 38.7 3.6 171 57-257 141-346 (2773)
134 PRK06445 acetyl-CoA acetyltran 96.0 0.025 6.5E-07 35.0 6.5 69 232-300 296-369 (394)
135 PRK07491 consensus 96.0 0.011 2.8E-07 37.4 4.6 69 232-300 294-367 (392)
136 PRK08041 consensus 96.0 0.026 6.6E-07 35.0 6.4 70 231-300 293-367 (391)
137 PRK05790 acetyl-CoA acetyltran 96.0 0.015 3.7E-07 36.6 5.0 69 232-300 295-368 (393)
138 PRK07800 consensus 96.0 0.014 3.6E-07 36.7 4.9 83 231-317 294-381 (393)
139 PRK07025 consensus 95.9 0.0092 2.3E-07 37.9 3.5 70 231-300 294-368 (393)
140 PRK08234 consensus 95.8 0.014 3.6E-07 36.7 4.2 70 231-300 300-374 (400)
141 PRK06366 acetyl-CoA acetyltran 95.7 0.024 6.2E-07 35.2 5.3 75 232-306 289-368 (388)
142 pfam08392 FAE1_CUT1_RppA FAE1/ 95.7 0.057 1.5E-06 32.7 7.1 83 230-315 87-173 (290)
143 PRK08242 acetyl-CoA acetyltran 95.6 0.046 1.2E-06 33.3 6.4 70 231-300 303-377 (402)
144 pfam02803 Thiolase_C Thiolase, 95.6 0.037 9.4E-07 34.0 5.8 70 231-300 25-99 (123)
145 PRK06205 acetyl-CoA acetyltran 95.6 0.024 6.1E-07 35.2 4.9 70 231-300 301-378 (404)
146 PRK05656 acetyl-CoA acetyltran 95.6 0.024 6.1E-07 35.2 4.7 70 231-300 294-368 (392)
147 PRK08131 acetyl-CoA acetyltran 95.5 0.031 7.8E-07 34.5 5.1 70 231-300 299-375 (401)
148 pfam02803 Thiolase_C Thiolase, 95.5 0.032 8.2E-07 34.4 5.2 92 58-170 24-123 (123)
149 PRK09051 beta-ketothiolase; Pr 95.5 0.021 5.3E-07 35.6 4.2 70 231-300 295-369 (394)
150 PRK09050 beta-ketoadipyl CoA t 95.5 0.034 8.6E-07 34.2 5.2 70 231-300 300-376 (401)
151 PRK07851 acetyl-CoA acetyltran 95.4 0.023 5.8E-07 35.3 4.3 114 158-300 260-379 (405)
152 PRK08947 fadA 3-ketoacyl-CoA t 95.2 0.036 9.1E-07 34.1 4.7 70 231-300 285-362 (387)
153 PRK07801 acetyl-CoA acetyltran 95.2 0.038 9.7E-07 33.9 4.8 70 231-300 283-357 (382)
154 PRK06633 acetyl-CoA acetyltran 95.1 0.056 1.4E-06 32.8 5.5 76 231-306 293-373 (392)
155 PRK12879 3-oxoacyl-(acyl carri 95.1 0.064 1.6E-06 32.4 5.7 13 262-274 233-245 (326)
156 PRK06816 3-oxoacyl-(acyl carri 95.1 0.12 3E-06 30.7 7.0 55 262-319 279-334 (378)
157 PRK07108 acetyl-CoA acetyltran 94.9 0.069 1.8E-06 32.2 5.3 70 231-300 293-367 (392)
158 PRK08235 acetyl-CoA acetyltran 94.8 0.04 1E-06 33.8 4.0 69 232-300 295-368 (393)
159 PRK06689 consensus 94.6 0.046 1.2E-06 33.4 4.0 87 231-317 292-383 (391)
160 PRK06025 acetyl-CoA acetyltran 94.6 0.11 2.7E-06 31.0 5.7 76 231-306 318-398 (417)
161 PRK07661 acetyl-CoA acetyltran 94.6 0.046 1.2E-06 33.3 3.9 69 232-300 286-359 (384)
162 PRK09352 3-oxoacyl-(acyl carri 94.6 0.062 1.6E-06 32.5 4.5 15 260-274 225-239 (319)
163 cd00830 KAS_III Ketoacyl-acyl 94.5 0.13 3.3E-06 30.4 5.9 13 235-247 257-269 (320)
164 CHL00203 fabH 3-oxoacyl-acyl-c 94.5 0.084 2.2E-06 31.6 5.0 16 233-248 258-273 (327)
165 PRK09052 acetyl-CoA acetyltran 94.4 0.066 1.7E-06 32.3 4.3 76 231-306 300-380 (399)
166 TIGR02845 spore_V_AD stage V s 94.4 0.095 2.4E-06 31.3 5.1 80 219-304 42-126 (331)
167 PRK06840 hypothetical protein; 94.3 0.071 1.8E-06 32.1 4.3 16 260-275 242-257 (337)
168 PRK07850 acetyl-CoA acetyltran 94.2 0.067 1.7E-06 32.3 4.0 69 232-300 289-362 (387)
169 PRK09258 3-oxoacyl-(acyl carri 94.0 0.19 4.7E-06 29.4 5.9 17 259-275 244-260 (339)
170 PRK08963 fadI 3-ketoacyl-CoA t 93.9 0.072 1.8E-06 32.1 3.6 69 232-300 321-411 (436)
171 cd00327 cond_enzymes Condensin 93.9 0.1 2.6E-06 31.1 4.4 26 57-82 146-171 (254)
172 pfam02801 Ketoacyl-synt_C Beta 93.9 0.16 4E-06 29.9 5.4 77 229-305 26-112 (117)
173 PRK08170 acetyl-CoA acetyltran 93.7 0.073 1.9E-06 32.0 3.4 76 231-306 310-407 (426)
174 PRK05963 3-oxoacyl-(acyl carri 93.6 0.07 1.8E-06 32.1 3.2 16 233-248 260-275 (327)
175 PRK06690 acetyl-CoA acetyltran 93.5 0.093 2.4E-06 31.4 3.7 69 232-300 262-335 (361)
176 PRK07855 lipid-transfer protei 93.5 0.28 7.1E-06 28.2 6.0 14 63-76 155-168 (386)
177 PRK07204 3-oxoacyl-(acyl carri 93.2 0.32 8.2E-06 27.8 6.0 12 263-274 238-249 (329)
178 PRK06158 thiolase; Provisional 93.0 0.097 2.5E-06 31.2 3.1 13 2-14 6-18 (384)
179 cd00829 SCP-x_thiolase Thiolas 92.9 0.36 9.1E-06 27.5 5.9 20 228-247 278-297 (375)
180 cd00751 thiolase Thiolase are 92.7 0.34 8.6E-06 27.7 5.6 80 232-311 289-370 (386)
181 cd00826 nondecarbox_cond_enzym 92.7 0.65 1.7E-05 25.8 7.0 43 231-273 272-314 (393)
182 COG3424 BcsA Predicted naringe 92.6 0.27 6.9E-06 28.3 5.0 29 143-171 216-244 (356)
183 PRK08371 consensus 92.4 0.1 2.6E-06 31.1 2.6 10 5-14 3-12 (388)
184 PRK08256 lipid-transfer protei 92.4 0.11 2.8E-06 30.9 2.7 22 4-25 1-25 (391)
185 PRK09268 acetyl-CoA acetyltran 92.3 0.062 1.6E-06 32.5 1.4 75 232-306 314-410 (428)
186 PRK08257 acetyl-CoA acetyltran 91.7 0.41 1E-05 27.2 5.0 91 228-322 294-394 (502)
187 PRK08142 acetyl-CoA acetyltran 91.3 0.16 4.2E-06 29.8 2.6 18 2-20 3-20 (388)
188 PRK04262 hypothetical protein; 91.2 0.76 1.9E-05 25.4 6.0 15 233-247 241-255 (346)
189 PRK07516 acetyl-CoA acetyltran 90.4 0.17 4.3E-06 29.7 2.0 91 231-321 263-380 (389)
190 PRK06065 acetyl-CoA acetyltran 90.1 0.3 7.7E-06 28.0 3.1 13 2-14 8-20 (393)
191 PRK07910 3-oxoacyl-(acyl carri 90.0 0.21 5.3E-06 29.1 2.2 83 233-319 326-409 (418)
192 PRK05952 3-oxoacyl-(acyl carri 89.7 0.44 1.1E-05 26.9 3.7 40 71-112 158-200 (379)
193 PRK08313 acetyl-CoA acetyltran 89.6 0.44 1.1E-05 27.0 3.6 40 283-322 334-380 (391)
194 PRK12578 acetyl-CoA acetyltran 89.6 0.33 8.4E-06 27.8 3.0 22 4-25 1-24 (385)
195 PRK09185 3-oxoacyl-(acyl carri 89.6 0.32 8.1E-06 27.9 2.9 81 234-319 303-385 (395)
196 PRK07937 lipid-transfer protei 89.4 0.29 7.3E-06 28.2 2.5 11 4-14 2-12 (352)
197 PRK12880 3-oxoacyl-(acyl carri 89.3 0.56 1.4E-05 26.2 4.0 16 233-248 274-289 (353)
198 cd00832 CLF Chain-length facto 89.3 0.28 7.2E-06 28.2 2.4 86 233-322 310-396 (399)
199 pfam08541 ACP_syn_III_C 3-Oxoa 89.1 0.17 4.2E-06 29.7 1.1 68 66-141 1-77 (90)
200 cd00825 decarbox_cond_enzymes 89.1 0.28 7E-06 28.3 2.2 23 57-84 101-123 (332)
201 PRK06157 acetyl-CoA acetyltran 87.5 0.51 1.3E-05 26.5 2.8 16 2-17 5-20 (400)
202 PRK13942 protein-L-isoaspartat 86.7 1.2 3.1E-05 24.1 4.3 32 90-122 61-93 (214)
203 COG0304 FabB 3-oxoacyl-(acyl-c 86.0 0.56 1.4E-05 26.3 2.3 14 306-319 389-402 (412)
204 PRK13943 protein-L-isoaspartat 85.5 0.91 2.3E-05 24.9 3.2 20 124-143 115-135 (317)
205 KOG1394 consensus 84.4 0.68 1.7E-05 25.7 2.1 50 224-275 268-321 (440)
206 PRK13944 protein-L-isoaspartat 83.7 1.3 3.2E-05 24.0 3.3 32 90-122 57-89 (205)
207 pfam01135 PCMT Protein-L-isoas 83.5 1.3 3.4E-05 23.8 3.3 22 90-111 58-80 (205)
208 pfam02801 Ketoacyl-synt_C Beta 83.3 0.44 1.1E-05 27.0 0.8 46 56-102 25-71 (117)
209 PRK06501 3-oxoacyl-(acyl carri 83.1 0.53 1.3E-05 26.4 1.1 13 72-84 190-202 (425)
210 PRK00312 pcm protein-L-isoaspa 82.7 1.4 3.6E-05 23.6 3.2 33 89-122 62-95 (213)
211 TIGR00080 pimt protein-L-isoas 82.7 1.7 4.3E-05 23.2 3.6 47 93-145 68-117 (228)
212 PRK07103 polyketide beta-ketoa 81.2 0.64 1.6E-05 25.9 1.0 68 245-319 336-406 (415)
213 PRK07591 threonine synthase; V 79.7 2.7 7E-05 21.8 3.8 68 252-319 314-393 (422)
214 PRK05638 threonine synthase; V 78.5 3.2 8.1E-05 21.3 3.8 68 252-319 280-358 (443)
215 PRK08197 threonine synthase; V 78.4 3.2 8.1E-05 21.3 3.9 61 259-319 310-381 (402)
216 PRK09585 anmK anhydro-N-acetyl 77.4 4.1 0.00011 20.6 4.2 64 55-118 70-143 (366)
217 TIGR01921 DAP-DH diaminopimela 77.3 5.7 0.00014 19.7 5.9 118 1-141 1-121 (326)
218 TIGR02823 oxido_YhdH putative 76.9 1.7 4.5E-05 23.0 2.1 19 251-269 275-293 (330)
219 TIGR01287 nifH nitrogenase iro 75.8 6.2 0.00016 19.4 4.8 21 250-270 253-273 (278)
220 TIGR01751 crot-CoA-red crotony 75.3 2.2 5.5E-05 22.4 2.3 30 290-320 377-407 (409)
221 PRK13410 molecular chaperone D 75.0 3.2 8.2E-05 21.3 3.1 56 219-274 296-358 (719)
222 TIGR01090 apt adenine phosphor 75.0 2.6 6.6E-05 21.9 2.6 81 217-313 25-121 (175)
223 PRK09275 aspartate aminotransf 74.5 4.5 0.00011 20.3 3.7 95 36-131 77-187 (531)
224 TIGR00151 ispF 2C-methyl-D-ery 74.2 4.5 0.00011 20.3 3.7 67 213-287 70-145 (159)
225 PRK00950 histidinol-phosphate 73.4 6.9 0.00018 19.1 4.4 30 5-36 8-37 (369)
226 KOG1794 consensus 73.3 7.2 0.00018 19.0 4.7 123 38-171 29-164 (336)
227 TIGR02482 PFKA_ATP 6-phosphofr 73.1 3.4 8.6E-05 21.2 2.8 27 112-138 139-165 (302)
228 TIGR02446 FadI acetyl-CoA C-ac 73.1 3.9 1E-04 20.7 3.1 88 51-138 28-116 (430)
229 PRK07409 threonine synthase; V 72.5 5.9 0.00015 19.6 3.9 35 285-319 289-323 (350)
230 TIGR02470 sucr_synth sucrose s 72.3 1.6 4E-05 23.4 0.9 95 5-106 314-418 (790)
231 COG0381 WecB UDP-N-acetylgluco 71.4 7.9 0.0002 18.7 6.0 85 50-142 69-176 (383)
232 PRK06260 threonine synthase; V 70.9 6.2 0.00016 19.4 3.7 61 259-319 301-372 (400)
233 PRK06721 threonine synthase; R 70.8 6.7 0.00017 19.2 3.9 34 286-319 286-319 (352)
234 pfam01295 Adenylate_cycl Adeny 69.8 8.5 0.00022 18.5 4.4 15 23-37 358-372 (830)
235 PRK06352 threonine synthase; V 69.5 7.3 0.00019 19.0 3.9 35 285-319 285-319 (351)
236 PRK08942 D,D-heptose 1,7-bisph 69.1 5.8 0.00015 19.6 3.3 49 229-278 69-126 (181)
237 PRK05183 hscA chaperone protei 68.7 3.1 7.8E-05 21.4 1.8 56 219-274 301-363 (621)
238 pfam02887 PK_C Pyruvate kinase 68.1 7.5 0.00019 18.9 3.7 27 290-316 77-103 (117)
239 PRK03910 D-cysteine desulfhydr 67.5 9.5 0.00024 18.2 5.3 46 261-316 273-318 (331)
240 COG2518 Pcm Protein-L-isoaspar 67.3 4.5 0.00012 20.3 2.4 32 89-121 56-88 (209)
241 PTZ00186 heat shock 70 kDa pre 66.9 2.7 6.9E-05 21.8 1.2 43 231-273 337-382 (657)
242 PRK00055 ribonuclease Z; Revie 66.7 9.8 0.00025 18.1 4.1 68 1-90 1-68 (259)
243 COG0533 QRI7 Metal-dependent p 66.0 5 0.00013 20.1 2.4 35 56-92 52-86 (342)
244 TIGR02350 prok_dnaK chaperone 65.9 3 7.5E-05 21.5 1.3 43 58-103 308-351 (598)
245 PRK05446 imidazole glycerol-ph 64.8 8.1 0.00021 18.7 3.3 47 36-88 52-98 (354)
246 TIGR02430 pcaF beta-ketoadipyl 64.7 4.5 0.00012 20.3 2.0 94 53-146 24-121 (400)
247 cd01451 vWA_Magnesium_chelatas 64.2 11 0.00028 17.8 5.3 87 52-142 16-107 (178)
248 PRK02731 histidinol-phosphate 63.9 11 0.00028 17.8 4.8 24 6-31 8-31 (367)
249 pfam01968 Hydantoinase_A Hydan 63.4 11 0.00029 17.7 4.0 53 220-272 209-261 (285)
250 TIGR03285 methan_mark_14 putat 62.8 4.9 0.00012 20.1 1.9 42 51-92 62-104 (445)
251 COG3072 CyaA Adenylate cyclase 62.7 7.7 0.0002 18.8 2.9 36 228-263 618-656 (853)
252 PRK09605 O-sialoglycoprotein e 62.7 9.4 0.00024 18.2 3.3 79 57-143 52-135 (536)
253 TIGR02824 quinone_pig3 putativ 61.9 6.6 0.00017 19.2 2.5 38 63-104 134-171 (334)
254 PRK00290 dnaK molecular chaper 61.1 12 0.00032 17.5 3.7 57 219-275 296-359 (631)
255 TIGR00289 TIGR00289 conserved 60.6 6.5 0.00017 19.3 2.2 31 74-105 88-118 (227)
256 CHL00094 dnaK heat shock prote 59.8 12 0.00031 17.5 3.5 57 219-275 296-359 (622)
257 COG3894 Uncharacterized metal- 58.5 8.9 0.00023 18.4 2.6 65 229-294 475-540 (614)
258 TIGR02445 fadA acetyl-CoA C-ac 57.3 10 0.00026 18.0 2.8 93 51-144 22-119 (385)
259 COG2073 CbiG Cobalamin biosynt 56.8 15 0.00037 17.0 4.9 84 229-321 210-295 (298)
260 TIGR01120 rpiB ribose 5-phosph 56.6 8.4 0.00021 18.6 2.2 75 60-144 15-89 (143)
261 pfam03377 Avirulence Xanthomon 55.8 15 0.00039 16.9 4.8 42 237-278 204-252 (289)
262 TIGR01991 HscA Fe-S protein as 55.1 6.1 0.00016 19.5 1.3 104 58-170 322-448 (628)
263 PRK13411 molecular chaperone D 53.2 17 0.00043 16.6 3.6 50 219-268 295-351 (655)
264 TIGR02810 agaZ_gatZ D-tagatose 52.4 3.3 8.5E-05 21.2 -0.4 33 235-268 347-380 (430)
265 PRK09450 cyaA adenylate cyclas 52.3 17 0.00044 16.5 4.4 15 23-37 353-367 (833)
266 PRK03158 histidinol-phosphate 52.2 17 0.00044 16.5 4.7 25 6-32 5-29 (359)
267 PTZ00340 O-sialoglycoprotein e 51.9 18 0.00045 16.5 3.6 33 59-93 61-93 (348)
268 KOG2707 consensus 51.9 13 0.00033 17.3 2.6 30 59-89 87-116 (405)
269 TIGR00329 gcp metalloendopepti 50.9 18 0.00046 16.4 4.2 75 60-142 59-142 (337)
270 COG4977 Transcriptional regula 50.8 10 0.00026 18.0 1.9 25 96-120 64-88 (328)
271 cd04333 ProX_deacylase This CD 50.8 18 0.00047 16.4 3.4 14 60-73 2-15 (148)
272 PRK09604 putative DNA-binding/ 50.7 18 0.00047 16.4 4.5 33 59-93 56-88 (335)
273 pfam00814 Peptidase_M22 Glycop 50.1 13 0.00033 17.4 2.3 34 57-92 31-64 (225)
274 TIGR02316 propion_prpE propion 49.8 19 0.00048 16.3 3.9 52 31-87 33-84 (634)
275 TIGR01341 aconitase_1 aconitat 49.2 19 0.00049 16.2 4.7 70 17-89 39-120 (896)
276 KOG2708 consensus 48.6 12 0.0003 17.6 1.9 95 58-161 53-151 (336)
277 PRK03321 putative aminotransfe 48.4 20 0.00051 16.1 5.9 16 7-22 8-23 (352)
278 TIGR02177 PorB_KorB 2-oxoacid: 48.3 20 0.0005 16.2 3.0 40 59-100 13-57 (302)
279 TIGR02651 RNase_Z ribonuclease 46.9 8.7 0.00022 18.5 1.0 68 5-90 1-69 (327)
280 TIGR01418 PEP_synth phosphoeno 45.9 6.6 0.00017 19.2 0.3 32 70-104 426-473 (877)
281 pfam09887 DUF2114 Uncharacteri 45.6 14 0.00036 17.1 2.0 41 51-91 64-106 (448)
282 pfam00862 Sucrose_synth Sucros 44.9 18 0.00047 16.3 2.5 35 233-270 390-425 (550)
283 COG0241 HisB Histidinol phosph 44.8 23 0.00057 15.8 3.2 53 229-282 71-132 (181)
284 TIGR01371 met_syn_B12ind 5-met 44.7 23 0.00058 15.8 3.1 10 259-268 512-521 (778)
285 pfam03702 UPF0075 Uncharacteri 43.1 24 0.00061 15.6 7.3 62 56-118 68-142 (363)
286 COG1448 TyrB Aspartate/tyrosin 43.0 11 0.00029 17.7 1.2 117 36-168 136-260 (396)
287 TIGR00417 speE spermidine synt 42.9 15 0.00038 16.9 1.7 54 229-282 176-231 (284)
288 pfam06406 StbA StbA protein. T 42.5 21 0.00052 16.0 2.4 30 52-81 72-101 (318)
289 TIGR01485 SPP_plant-cyano sucr 42.4 25 0.00062 15.5 5.8 40 230-270 137-184 (257)
290 PRK09206 pyruvate kinase; Prov 42.2 25 0.00063 15.5 3.4 30 290-319 430-462 (470)
291 PRK05166 histidinol-phosphate 41.5 25 0.00064 15.4 5.3 22 8-31 16-37 (374)
292 PTZ00009 heat shock 70 kDa pro 41.2 24 0.00062 15.6 2.6 27 232-258 317-343 (657)
293 cd01563 Thr-synth_1 Threonine 40.8 26 0.00066 15.4 3.8 49 270-318 267-322 (324)
294 pfam00012 HSP70 Hsp70 protein. 40.6 26 0.00066 15.4 6.3 57 219-275 293-356 (598)
295 cd06188 NADH_quinone_reductase 40.6 26 0.00067 15.4 4.1 44 232-277 234-280 (283)
296 PRK05387 histidinol-phosphate 40.5 26 0.00067 15.3 5.1 20 6-25 7-26 (353)
297 smart00829 PKS_ER Enoylreducta 40.3 24 0.0006 15.6 2.4 33 67-103 98-130 (288)
298 pfam01890 CbiG_C Cobalamin syn 38.7 28 0.00071 15.2 3.7 42 230-271 17-60 (121)
299 TIGR01393 lepA GTP-binding pro 38.1 18 0.00047 16.3 1.6 76 1-86 227-303 (598)
300 KOG1015 consensus 38.0 20 0.00051 16.1 1.7 90 41-141 641-736 (1567)
301 cd06449 ACCD Aminocyclopropane 37.5 29 0.00074 15.1 3.5 30 286-315 277-306 (307)
302 PRK13929 rod-share determining 37.3 18 0.00045 16.5 1.4 71 227-298 255-331 (335)
303 TIGR02362 dhaK1b probable dihy 37.2 19 0.00048 16.3 1.5 74 69-145 52-135 (328)
304 TIGR02478 6PF1K_euk 6-phosphof 37.1 29 0.00075 15.0 4.2 62 4-75 243-317 (777)
305 PRK04761 ppnK inorganic polyph 37.1 21 0.00054 16.0 1.8 59 56-120 5-64 (246)
306 cd04493 BRCA2DBD_OB1 BRCA2DBD_ 36.3 30 0.00077 14.9 2.5 37 108-144 24-65 (100)
307 PRK05464 Na(+)-translocating N 36.2 31 0.00078 14.9 4.0 44 235-283 361-407 (408)
308 COG2377 Predicted molecular ch 35.6 22 0.00055 15.9 1.6 62 55-117 72-146 (371)
309 COG0013 AlaS Alanyl-tRNA synth 35.2 32 0.00081 14.8 3.5 13 304-316 651-663 (879)
310 PRK13980 NAD synthetase; Provi 35.0 16 0.00041 16.7 0.9 71 92-167 73-158 (264)
311 cd00288 Pyruvate_Kinase Pyruva 34.7 32 0.00082 14.8 3.8 24 290-313 440-463 (480)
312 TIGR03286 methan_mark_15 putat 34.4 27 0.00069 15.2 2.0 25 55-79 178-202 (404)
313 TIGR00263 trpB tryptophan synt 34.0 33 0.00084 14.7 3.4 129 59-188 167-325 (412)
314 PRK03566 consensus 33.7 33 0.00085 14.7 5.3 22 8-31 10-31 (365)
315 PRK06851 hypothetical protein; 33.6 33 0.00085 14.6 5.1 55 49-103 39-109 (368)
316 PRK13609 diacylglycerol glucos 33.5 18 0.00045 16.4 0.9 30 276-307 346-375 (388)
317 PRK07027 cobalamin biosynthesi 33.3 34 0.00086 14.6 3.4 27 55-81 16-42 (126)
318 PRK00768 nadE NAD synthetase; 33.0 34 0.00087 14.6 4.5 32 131-166 150-181 (274)
319 pfam02353 CMAS Cyclopropane-fa 32.5 35 0.00089 14.5 2.6 106 21-141 6-119 (273)
320 COG0426 FpaA Uncharacterized f 32.4 35 0.00089 14.5 3.0 33 51-88 53-85 (388)
321 TIGR00761 argB acetylglutamate 32.0 34 0.00087 14.6 2.2 63 63-136 91-158 (254)
322 cd06221 sulfite_reductase_like 31.8 36 0.00091 14.5 3.0 53 236-290 179-239 (253)
323 pfam01902 ATP_bind_4 ATP-bindi 31.7 34 0.00087 14.6 2.1 113 7-139 25-141 (219)
324 PRK11873 arsM arsenite S-adeno 31.4 23 0.00058 15.7 1.2 18 108-127 77-94 (258)
325 TIGR01163 rpe ribulose-phospha 30.6 37 0.00095 14.3 5.7 98 211-319 28-142 (216)
326 pfam12244 DUF3606 Protein of u 30.6 37 0.00096 14.3 2.3 44 242-287 6-49 (57)
327 PRK12390 1-aminocyclopropane-1 30.1 38 0.00097 14.3 4.6 46 261-316 279-324 (337)
328 cd01994 Alpha_ANH_like_IV This 30.1 38 0.00097 14.3 2.4 66 62-138 77-143 (194)
329 pfam09103 BRCA-2_OB1 BRCA2, ol 29.9 39 0.00098 14.2 2.5 71 61-144 2-77 (118)
330 PRK02628 nadE NAD synthetase; 29.5 39 0.001 14.2 2.8 51 235-285 383-444 (678)
331 PRK11872 antC anthranilate dio 29.1 40 0.001 14.2 3.7 41 234-276 288-331 (340)
332 TIGR02684 dnstrm_HI1420 probab 29.0 20 0.0005 16.2 0.5 64 228-291 15-78 (91)
333 PRK09483 response regulator; P 28.6 39 0.00099 14.2 2.0 95 57-172 12-107 (216)
334 PRK03202 6-phosphofructokinase 27.7 34 0.00087 14.6 1.5 72 71-147 90-174 (323)
335 PRK03359 putative electron tra 27.5 42 0.0011 14.0 2.3 14 57-70 40-53 (256)
336 PRK00561 ppnK inorganic polyph 27.5 42 0.0011 14.0 3.3 62 55-122 13-74 (259)
337 PRK02947 hypothetical protein; 27.4 21 0.00052 16.0 0.4 14 231-245 204-217 (247)
338 PRK05826 pyruvate kinase; Prov 27.4 43 0.0011 14.0 3.5 25 289-313 432-456 (461)
339 PRK13385 2-C-methyl-D-erythrit 27.2 43 0.0011 14.0 6.2 10 74-83 44-53 (238)
340 TIGR00689 rpiB_lacA_lacB sugar 27.2 43 0.0011 13.9 2.6 64 61-130 15-78 (146)
341 COG2230 Cfa Cyclopropane fatty 27.1 43 0.0011 13.9 2.6 105 20-138 15-126 (283)
342 TIGR01258 pgm_1 phosphoglycera 27.0 32 0.00081 14.8 1.3 175 58-296 35-217 (248)
343 PRK13930 rod shape-determining 27.0 39 0.001 14.2 1.8 46 229-274 260-311 (336)
344 PRK09257 aromatic amino acid a 26.9 43 0.0011 13.9 3.9 116 36-167 136-259 (397)
345 cd01781 AF6_RA_repeat2 The AF- 26.8 39 0.001 14.2 1.7 28 230-257 28-55 (100)
346 pfam07736 CM_1 Chorismate muta 26.4 44 0.0011 13.9 2.1 45 61-109 25-72 (118)
347 pfam02261 Asp_decarbox Asparta 26.4 24 0.00061 15.6 0.6 10 134-143 42-51 (116)
348 PRK09629 bifunctional thiosulf 26.1 38 0.00097 14.3 1.5 47 60-110 209-255 (610)
349 COG4065 Uncharacterized protei 25.9 45 0.0012 13.8 3.1 42 51-92 94-137 (480)
350 PRK05449 aspartate alpha-decar 25.8 24 0.00061 15.6 0.5 36 134-169 42-80 (126)
351 TIGR01011 rpsB_bact ribosomal 25.7 34 0.00087 14.6 1.2 58 81-144 14-75 (227)
352 cd01714 ETF_beta The electron 25.6 46 0.0012 13.8 2.5 11 135-145 109-119 (202)
353 PRK00782 hypothetical protein; 25.4 46 0.0012 13.7 4.7 63 231-293 162-230 (272)
354 TIGR01136 cysKM cysteine synth 25.4 39 0.001 14.2 1.5 75 57-138 45-141 (315)
355 COG0853 PanD Aspartate 1-decar 25.2 33 0.00084 14.7 1.1 10 161-170 71-80 (126)
356 PRK01533 histidinol-phosphate 25.2 46 0.0012 13.7 4.7 25 4-30 3-27 (366)
357 TIGR01993 Pyr-5-nucltdase pyri 25.1 28 0.00071 15.2 0.7 30 256-285 162-192 (205)
358 COG3053 CitC Citrate lyase syn 25.0 47 0.0012 13.7 4.4 20 62-81 20-40 (352)
359 TIGR02802 Pal_lipo peptidoglyc 24.7 48 0.0012 13.7 2.3 49 50-98 45-96 (104)
360 cd06919 Asp_decarbox Aspartate 24.6 24 0.00062 15.5 0.3 10 134-143 41-50 (111)
361 PRK07392 threonine-phosphate d 24.6 48 0.0012 13.6 5.2 16 23-38 11-26 (358)
362 PRK05472 redox-sensing transcr 24.5 48 0.0012 13.6 3.7 11 133-143 84-94 (211)
363 COG2971 Predicted N-acetylgluc 24.4 48 0.0012 13.6 2.5 109 52-170 45-159 (301)
364 PRK11705 cyclopropane fatty ac 24.3 48 0.0012 13.6 2.4 31 96-128 158-189 (383)
365 TIGR01743 purR_Bsub pur operon 24.3 48 0.0012 13.6 3.0 70 64-138 118-201 (269)
366 cd01448 TST_Repeat_1 Thiosulfa 24.3 44 0.0011 13.9 1.6 37 259-295 65-101 (122)
367 TIGR01428 HAD_type_II haloacid 24.0 49 0.0012 13.6 2.4 19 54-72 62-80 (207)
368 cd03749 proteasome_alpha_type_ 24.0 49 0.0012 13.6 2.3 27 226-252 182-209 (211)
369 pfam06723 MreB_Mbl MreB/Mbl pr 24.0 45 0.0011 13.8 1.6 49 228-276 251-305 (327)
370 pfam01650 Peptidase_C13 Peptid 23.7 38 0.00097 14.3 1.2 20 62-81 24-43 (258)
371 KOG0820 consensus 23.6 50 0.0013 13.5 3.2 14 63-76 48-61 (315)
372 PRK04841 transcriptional regul 23.1 51 0.0013 13.5 3.0 20 113-132 213-232 (903)
373 KOG0024 consensus 22.9 51 0.0013 13.4 1.8 11 247-257 317-327 (354)
374 PRK13928 rod shape-determining 22.8 50 0.0013 13.5 1.6 50 226-275 251-306 (325)
375 PRK04346 tryptophan synthase s 22.3 53 0.0013 13.4 1.8 87 59-148 171-266 (392)
376 TIGR00014 arsC arsenate reduct 22.3 53 0.0013 13.4 3.5 50 233-283 14-68 (114)
377 pfam02685 Glucokinase Glucokin 22.2 53 0.0014 13.3 3.5 48 60-107 40-96 (316)
378 TIGR02365 dha_L_ycgS dihydroxy 22.0 42 0.0011 14.0 1.1 16 282-297 181-198 (200)
379 KOG2865 consensus 22.0 21 0.00055 15.9 -0.4 64 59-131 121-191 (391)
380 PRK04152 consensus 21.6 54 0.0014 13.3 4.6 34 3-38 2-35 (364)
381 CHL00181 cbbX CbbX; Provisiona 21.6 55 0.0014 13.3 2.0 15 254-268 236-250 (287)
382 PRK05452 anaerobic nitric oxid 21.3 43 0.0011 13.9 1.1 20 70-89 66-85 (479)
383 pfam11212 DUF2999 Protein of u 21.2 49 0.0013 13.6 1.3 43 234-276 4-47 (82)
384 TIGR00878 purM phosphoribosylf 21.1 55 0.0014 13.3 1.6 66 218-288 215-294 (338)
385 COG1889 NOP1 Fibrillarin-like 21.1 52 0.0013 13.4 1.4 36 219-254 191-226 (231)
386 PRK11921 metallo-beta-lactamas 20.9 43 0.0011 14.0 1.0 18 71-88 65-82 (395)
387 cd06209 BenDO_FAD_NAD Benzoate 20.3 58 0.0015 13.1 3.7 39 237-277 183-224 (228)
388 KOG2112 consensus 20.2 58 0.0015 13.1 2.5 18 114-131 67-84 (206)
389 PRK12613 galactose-6-phosphate 20.2 58 0.0015 13.1 2.0 22 54-76 11-32 (141)
No 1
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III; InterPro: IPR004655 Beta-ketoacyl-acyl carrier protein synthase III (FabH), in general, initiates elongation in type II fatty acid synthase systems found in bacteria and plants. It is responsible for producing the multitude of fatty acid structures found in bacterial membranes . The two members of this subfamily from Bacillus subtilis differ from each other, and from FabH from Escherichia coli, in acyl group specificity. Active site residues include Cys112, His244 and Asn274 of Escherichia coli FabH. Cys-112 is the site of acyl group attachment. ; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process.
Probab=100.00 E-value=0 Score=642.27 Aligned_cols=321 Identities=33% Similarity=0.552 Sum_probs=308.1
Q ss_pred CEEEEEEEEECCCCCCCHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
Q ss_conf 20999999735886138889998809997683111475088994898879999999999986430132223442588431
Q gi|254780489|r 5 SSCILGFGHAVPNQCIHNSIIERHLNLKLGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTLLATS 84 (325)
Q Consensus 5 ~~~I~g~g~~lP~~~i~n~~l~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~ 84 (325)
++.|.|+|.|+|++++||+||+|++++++|||..||||++||++.++|+.+.||++||++|||+|+++++|||+||++|.
T Consensus 2 ~~~i~g~G~YlP~~v~tNadL~k~vDTSDEWI~TRTGI~eRRiAad~E~~S~mg~~AA~~Aie~A~i~~~dID~iivaT~ 81 (329)
T TIGR00747 2 KAKILGTGSYLPEKVLTNADLEKMVDTSDEWIVTRTGIKERRIAADDETSSHMGFEAAKKAIENAGISKDDIDLIIVATT 81 (329)
T ss_pred EEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECC
T ss_conf 35789860307751357333453210683311236861000214720126899999999999852788668786798057
Q ss_pred EECC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCEEEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 0023-68874322112100238633342101231012567657887438-850588620122444462224434325442
Q gi|254780489|r 85 TPDH-LLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYINSH-QKPVLIIAANLLSRRINLEDKDTAIIFGDA 162 (325)
Q Consensus 85 t~d~-~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~g-~~~vLVv~~e~~S~~~d~~d~~~~~lfGDg 162 (325)
|||+ .+||.||+||..||++++++||++.+|+||+++|++|.+|+++| ++++|||++|.+|+.+||+||+|.+|||||
T Consensus 82 ~pd~l~fPS~Ac~~~~~LGi~~~~aFD~~AACaGF~Y~Ls~A~~~i~SG~y~~vLvvGaeklSs~~D~~DR~TcvLFGDG 161 (329)
T TIGR00747 82 TPDYLAFPSAACMVQAYLGIKNIPAFDLSAACAGFIYGLSVAKQYIESGKYKTVLVVGAEKLSSTLDWTDRGTCVLFGDG 161 (329)
T ss_pred CCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCC
T ss_conf 80000377858999976186676322236567668999999999861577026889985110553674668757996067
Q ss_pred EEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCC--CCCCCCCCCCHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 00112205765444531135532136776527830698667654455--6552322451454343201003678988997
Q gi|254780489|r 163 AGAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNT--HDFYMRITNGADIFYNAVKIMAQSAKQSLRK 240 (325)
Q Consensus 163 A~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~ 240 (325)
|+|+||++++...+..|+.+.+.+||+..+.++.+.+....|..... ....+..|+|++|||++++.|.+.++++|++
T Consensus 162 AgA~v~g~s~~~~~~eI~~~~l~AdG~~~~~L~l~~~~~~~P~~~~~~~~~~~f~~M~G~evFk~Av~~m~~~~~~~l~~ 241 (329)
T TIGR00747 162 AGAVVVGESEDDGGLEIISTNLGADGTQGELLYLPAGGRRCPFSKNTLQGSSPFITMEGNEVFKHAVRKMLKVVEETLEA 241 (329)
T ss_pred CEEEEEECCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 22688704578776301234653056443213206777668877773446666178737325889999999999999997
Q ss_pred HCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHH-CCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
Q ss_conf 40120012246305654138999999719786570021854-09330005999999999806789998999998615510
Q gi|254780489|r 241 SDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNSLKD-FGNSSSASIPLSLSLENQRKPFQKGEKILTISCRRGND 319 (325)
Q Consensus 241 ~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~l~~-~GN~~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~G~s 319 (325)
++|+++|||||||||+|.||+++++|+|++++|+++.++.+ ||||++||||++|++++++|+||+||.+||.+||+|+|
T Consensus 242 a~l~~~DiD~lvPHQAN~RIi~a~ak~L~~~~~~Vv~Tv~khyGNTSAASiP~AL~E~~~~G~iK~Gd~~LL~AFGGGLt 321 (329)
T TIGR00747 242 AGLSKEDIDWLVPHQANIRIIEALAKRLELKESKVVKTVHKHYGNTSAASIPIALDELLETGRIKKGDLLLLVAFGGGLT 321 (329)
T ss_pred HCCCHHHCCEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHHHH
T ss_conf 18783046155554111689999999708980316863200134630434667899987417777244888763060356
Q ss_pred CCCCCC
Q ss_conf 201019
Q gi|254780489|r 320 RGIYCL 325 (325)
Q Consensus 320 ~ga~lL 325 (325)
||+.++
T Consensus 322 WGa~~v 327 (329)
T TIGR00747 322 WGAALV 327 (329)
T ss_pred HHHHHH
T ss_conf 677752
No 2
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00 E-value=0 Score=578.34 Aligned_cols=318 Identities=39% Similarity=0.637 Sum_probs=301.9
Q ss_pred CCEEEEEEEEECCCCCCCHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
Q ss_conf 62099999973588613888999880999768311147508899489887999999999998643013222344258843
Q gi|254780489|r 4 SSSCILGFGHAVPNQCIHNSIIERHLNLKLGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTLLAT 83 (325)
Q Consensus 4 ~~~~I~g~g~~lP~~~i~n~~l~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s 83 (325)
.+++|.|+|+|+|+++++|++++++++++++||.++|||++||++.++|++++|+++|+|+||++|+++|+|||+||++|
T Consensus 2 ~~a~i~g~G~~lP~~~vtn~d~e~~~~tsdewI~~rtGir~R~~a~~~e~~s~la~~Aa~~AL~~Agi~~~dIDlII~aT 81 (323)
T COG0332 2 MNAKILGIGSYLPERVVTNADLEKRVDTSDEWIETRTGIRERRIAADDETTSDLAVEAARKALEDAGISPDDIDLIIVAT 81 (323)
T ss_pred CCCEEEEEEEECCCCCCCHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEC
T ss_conf 85269988852687655778898536887110553037711231699954778999999999998699989998899966
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCEEEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 1002368874322112100238633342101231012567657887438-850588620122444462224434325442
Q gi|254780489|r 84 STPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYINSH-QKPVLIIAANLLSRRINLEDKDTAIIFGDA 162 (325)
Q Consensus 84 ~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~g-~~~vLVv~~e~~S~~~d~~d~~~~~lfGDg 162 (325)
+|||+++|++|++||++||+.++.+||++.+|+||++||++|..++++| +|++|||++|++|+++||+||.++++||||
T Consensus 82 ~tpd~~~Ps~A~~vq~~LG~~~~~afDl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVgae~~S~~ld~~dR~t~vlFgDG 161 (323)
T COG0332 82 STPDHLFPSTACLVQARLGLGGAPAFDLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETLSRILDWTDRDTCVLFGDG 161 (323)
T ss_pred CCCCCCCCHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCHHHCCCEEEECCC
T ss_conf 78666688179999998589986666605355999999999999997589777999810584045887665612897377
Q ss_pred EEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHC
Q ss_conf 00112205765444531135532136776527830698667654455655232245145434320100367898899740
Q gi|254780489|r 163 AGAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSD 242 (325)
Q Consensus 163 A~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~g 242 (325)
|+|+||++.+ .+.+++.+.+.+++++++....+.+.... ........+..++|++||+++++.++++++++|++++
T Consensus 162 AgAvvl~~~~--~~~~i~~~~l~sdg~~~~~l~~~~~~~~~--~~~~~~~~~~~m~Gr~vfk~av~~~~~~~~~~L~~~~ 237 (323)
T COG0332 162 AGAVVLEATE--DDNGILDTDLGSDGSQGDLLYLPGGGSAT--PKEESGGGLLVMDGREVFKFAVRAMPKAIEEVLEKAG 237 (323)
T ss_pred CEEEEEECCC--CCCCEEEEEEECCCCCCCEEECCCCCCCC--CCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 3599983578--77662342332356678744226777766--6444565323544588999999999999999999849
Q ss_pred CCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCC
Q ss_conf 12001224630565413899999971978657002185409330005999999999806789998999998615510201
Q gi|254780489|r 243 LQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNSLKDFGNSSSASIPLSLSLENQRKPFQKGEKILTISCRRGNDRGI 322 (325)
Q Consensus 243 l~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~l~~~GN~~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~G~s~ga 322 (325)
++++|||||+|||+|.++++.++++|++|++|++.++++||||++||+|++|++++++|++||||+|+|++||+|+|||+
T Consensus 238 l~~~dId~~vpHQan~ri~~~i~~~l~~~~~k~~~~~~~yGNtsaAsiplaL~~~~~~g~ik~Gd~vll~~fG~Gltwg~ 317 (323)
T COG0332 238 LTPEDIDWFVPHQANLRIIEAIAKKLGIPEEKVVVTVDKYGNTSAASIPLALDEALREGRIKPGDLVLLEAFGGGLTWGA 317 (323)
T ss_pred CCHHHCCEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEE
T ss_conf 99889988720645499999999982998899756898755463230899999874508989998999993037532136
Q ss_pred CCC
Q ss_conf 019
Q gi|254780489|r 323 YCL 325 (325)
Q Consensus 323 ~lL 325 (325)
+++
T Consensus 318 ~~~ 320 (323)
T COG0332 318 ALV 320 (323)
T ss_pred EEE
T ss_conf 999
No 3
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=0 Score=567.92 Aligned_cols=321 Identities=51% Similarity=0.886 Sum_probs=304.9
Q ss_pred CCEEEEEEEEECCCCCCCHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
Q ss_conf 62099999973588613888999880999768311147508899489887999999999998643013222344258843
Q gi|254780489|r 4 SSSCILGFGHAVPNQCIHNSIIERHLNLKLGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTLLAT 83 (325)
Q Consensus 4 ~~~~I~g~g~~lP~~~i~n~~l~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s 83 (325)
..++|+|+|+|+|+++|+|+|++++++++++||+++|||++|||+.++|++++||++|+++||++++++|+|||+||++|
T Consensus 3 ~~~rI~g~G~ylP~~~v~n~el~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~ma~~Aa~~aL~~agi~~~dIdllI~~t 82 (327)
T PRK05963 3 CSSRIAGFGHAVPDRRVENAEIEAQLGLETGWIERRTGIRCRRWAMPDETLSHLAASAADMALADAGIERSDIALTLLAT 82 (327)
T ss_pred CCCEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEE
T ss_conf 46779999996799378399999882999799775369337998899999999999999999997598989987999986
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 10023688743221121002386333421012310125676578874388505886201224444622244343254420
Q gi|254780489|r 84 STPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYINSHQKPVLIIAANLLSRRINLEDKDTAIIFGDAA 163 (325)
Q Consensus 84 ~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~g~~~vLVv~~e~~S~~~d~~d~~~~~lfGDgA 163 (325)
++||+.+|++|++||++||++++.+|||+++|+||++||++|..+++++.+++|||++|.+|+.+|+.|+.+.++|||||
T Consensus 83 ~t~d~~~P~~A~~v~~~LGl~~~~~fDi~~aC~g~~~al~~A~~~i~~~~~~vLvv~~e~~S~~~~~~d~~~~~lfgDgA 162 (327)
T PRK05963 83 STPDHLLPPTAPLLAHWLGLQNSGAADLAGACTGFLYALVLADGFVRAQGKPVLVVAANILSRRINMAERASAVLFADAA 162 (327)
T ss_pred ECCCCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCCHHHHHHHHCCCCC
T ss_conf 07999897099999998577861143597668999999999999997348637996410210358801233432304700
Q ss_pred EEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCC--CCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 0112205765444531135532136776527830698667654455--65523224514543432010036789889974
Q gi|254780489|r 164 GAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNT--HDFYMRITNGADIFYNAVKIMAQSAKQSLRKS 241 (325)
Q Consensus 164 ~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~ 241 (325)
+|+||++.+. +..+++...+.+++.+++.+.+|.+++..+..... ....+.+++|+.+|+++++.+++.++++|+++
T Consensus 163 ~A~vl~~~~~-~~~g~l~~~~~td~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~L~~~ 241 (327)
T PRK05963 163 GAVVLAPSAK-ANSGVLGSQLISDGSHYDLIQIPAGGSARPYAPERDASEFLMTMQDGRAVFTEAVRMMTGASQNVLASA 241 (327)
T ss_pred CEEEEECCCC-CCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 0689841578-887446689864378766388557986788887666665524751749999999985299999999984
Q ss_pred CCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCC
Q ss_conf 01200122463056541389999997197865700218540933000599999999980678999899999861551020
Q gi|254780489|r 242 DLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNSLKDFGNSSSASIPLSLSLENQRKPFQKGEKILTISCRRGNDRG 321 (325)
Q Consensus 242 gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~l~~~GN~~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~G~s~g 321 (325)
|++++|||||+|||+|+++++.++++||+|+||++.++++||||+|||+|++|++++++++++|||+|+|++||+|+|||
T Consensus 242 gl~~~dId~~v~HQ~n~~~~~~v~~~lgl~~ek~~~~~~~~GNt~sAsipiaL~~a~~~g~l~~Gd~vll~g~G~G~s~g 321 (327)
T PRK05963 242 AMLPQDIDRFFPHQANARIVDKVCETLGIPRAKAASTIETYGNSSAATIPLSLSLANLEQPLREGERLLFAAAGAGMTGG 321 (327)
T ss_pred CCCHHHCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEHHHHHH
T ss_conf 99822288899867998999999998297978703027513924888999999999982999997999999986686354
Q ss_pred CCCC
Q ss_conf 1019
Q gi|254780489|r 322 IYCL 325 (325)
Q Consensus 322 a~lL 325 (325)
+++|
T Consensus 322 ~~~~ 325 (327)
T PRK05963 322 AVVM 325 (327)
T ss_pred HHEE
T ss_conf 5126
No 4
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=0 Score=566.93 Aligned_cols=314 Identities=39% Similarity=0.599 Sum_probs=298.8
Q ss_pred CEEEEEEEEECCCCCCCHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
Q ss_conf 20999999735886138889998809997683111475088994898879999999999986430132223442588431
Q gi|254780489|r 5 SSCILGFGHAVPNQCIHNSIIERHLNLKLGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTLLATS 84 (325)
Q Consensus 5 ~~~I~g~g~~lP~~~i~n~~l~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~ 84 (325)
+++|+|+|+|+|+++|+|+|++++++.+++||.++|||++|||++++|++++||++|+|+||++++++|+|||+||++|+
T Consensus 3 ~a~I~g~g~ylP~~~v~n~el~~~~~~~~~~i~~~tGI~~R~~a~~~e~~~~ma~~Aa~~aL~~ag~~~~dIdlli~~t~ 82 (319)
T PRK09352 3 YAKILGTGSYLPERVVTNDDLEKMVDTSDEWIVTRTGIKERRIAAPDETTSDLATEAAKKALEAAGIDPEDIDLIIVATT 82 (319)
T ss_pred CCEEEEEEEECCCCEECHHHHHHHCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEEC
T ss_conf 33898999978996586999998719988999756494589988999999999999999999975989889979999741
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCEEEEEEECCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 002368874322112100238633342101231012567657887438-8505886201224444622244343254420
Q gi|254780489|r 85 TPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYINSH-QKPVLIIAANLLSRRINLEDKDTAIIFGDAA 163 (325)
Q Consensus 85 t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~g-~~~vLVv~~e~~S~~~d~~d~~~~~lfGDgA 163 (325)
+||+.+|++|++||++||++++++|||+++|+||++||++|..++++| .+++|||++|++|+.+||+|+.++++|||||
T Consensus 83 t~d~~~P~~a~~v~~~LGl~~~~~fDi~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGDGA 162 (319)
T PRK09352 83 TPDYLFPSTACLVQARLGAKNAPAFDLSAACSGFVYALSTADQFIRSGAYKNALVIGAEKLSRIVDWTDRSTCVLFGDGA 162 (319)
T ss_pred CCCCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHCCCCCCCCCCHHEEEECCCC
T ss_conf 78998966999999997899973753743456899999999999866987626996110101424555500016615850
Q ss_pred EEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCC
Q ss_conf 01122057654445311355321367765278306986676544556552322451454343201003678988997401
Q gi|254780489|r 164 GAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDL 243 (325)
Q Consensus 164 ~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl 243 (325)
+|+||++++ +.+++.+.+.+++++++.+.++.++...+.... ....++|+++|+++++.+++.++++|+++|+
T Consensus 163 aA~vl~~~~---~~~~~~~~~~tdg~~~~~~~~~~~~~~~~~~~~----~~~~m~g~~v~~~a~~~~~~~i~~~L~~~gl 235 (319)
T PRK09352 163 GAVVLEASE---EPGILSTHLGSDGSGGDLLYLPGGGSRGPASGE----TYLRMEGREVFKFAVREMAKVAREALEAAGL 235 (319)
T ss_pred CEEEEEECC---CCCEEEEEEEECCCCCCEEEECCCCCCCCCCCC----CCEEECHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 079997548---887368999974888875896788888987877----5467644999999998549999999987499
Q ss_pred CCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC
Q ss_conf 20012246305654138999999719786570021854093300059999999998067899989999986155102010
Q gi|254780489|r 244 QPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNSLKDFGNSSSASIPLSLSLENQRKPFQKGEKILTISCRRGNDRGIY 323 (325)
Q Consensus 244 ~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~l~~~GN~~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~G~s~ga~ 323 (325)
+++|||||++||+|+++++.++++||+|++|++.++++||||+|||+|++|++++++|+++|||+|++++||+|+|||++
T Consensus 236 ~~~dId~~i~Hq~~~~~~~~~~~~lgi~~ek~~~~l~~~GNt~sasipi~L~~~~~~g~lk~Gd~vll~~~G~G~s~~~~ 315 (319)
T PRK09352 236 TPEDIDWLVPHQANLRIIDATAKKLGLPMEKVVVTVDKYGNTSAASIPLALDEAVRDGRIKRGDLVLLEGFGGGLTWGAA 315 (319)
T ss_pred CHHHCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEHHHEEEEE
T ss_conf 83238789982676899999999819798885654875384588789999999998399999799999998447431788
Q ss_pred CC
Q ss_conf 19
Q gi|254780489|r 324 CL 325 (325)
Q Consensus 324 lL 325 (325)
+|
T Consensus 316 vl 317 (319)
T PRK09352 316 LV 317 (319)
T ss_pred EE
T ss_conf 99
No 5
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=0 Score=558.16 Aligned_cols=321 Identities=27% Similarity=0.426 Sum_probs=299.1
Q ss_pred CCCCEEEEEEEEECCCCCCCHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEE
Q ss_conf 66620999999735886138889998809997683111475088994898879999999999986430132223442588
Q gi|254780489|r 2 IKSSSCILGFGHAVPNQCIHNSIIERHLNLKLGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTLL 81 (325)
Q Consensus 2 ~~~~~~I~g~g~~lP~~~i~n~~l~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~ 81 (325)
|+++++|+|+|+|+|+++|+|+|++++++++++||.++|||++|||++ +|++++|+++|+++||++++++|+|||+||+
T Consensus 1 m~~~v~I~g~g~ylP~~~v~n~el~~~~~~~~~~i~~~tGI~~R~~a~-~e~~sdma~~Aa~~aL~~agi~~~dIdliI~ 79 (329)
T PRK07204 1 MKRYISIKGIGTYLPKRKVDSLEIDKMLDVPEGWTLKKAGVKTRYFVD-GETSSYMGAEAAKKAVEDAKLTWDDIDCIIC 79 (329)
T ss_pred CCCCEEEEEEEEECCCCEECHHHHHHHCCCCHHHHHHCCCCEEEEECC-CCCHHHHHHHHHHHHHHHCCCCHHHCCEEEE
T ss_conf 998549999999669972859999988099879997623861685579-9985999999999999975989888849999
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCHHHHHHHHHHHHCC-CCEEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 4310023688743221121002386--33342101231012567657887438-85058862012244446222443432
Q gi|254780489|r 82 ATSTPDHLLPPSSPLITHRLGLMQS--GAIDLTGACAGFLYALVMADSYINSH-QKPVLIIAANLLSRRINLEDKDTAII 158 (325)
Q Consensus 82 ~s~t~d~~~P~~a~~v~~~Lg~~~~--~~~di~~~C~g~l~aL~~A~~~i~~g-~~~vLVv~~e~~S~~~d~~d~~~~~l 158 (325)
+|++||+.+|++|++||++||++++ .||||+++|+||++||++|..++++| .+++|||++|.+|+.+||.++.+.++
T Consensus 80 ~s~t~d~~~P~~A~~v~~~LGl~~~~~~afDi~~aC~g~~~al~~A~~~i~~g~~~~~Lvv~~e~~S~~~d~~~~~~~~l 159 (329)
T PRK07204 80 GSGTIQQAIPSTASLIQEQLGLQHSGIPCFDINSTCLSFITALDTISYAIECGRYKNVVIISSEISSVGLNWGQNESSIL 159 (329)
T ss_pred ECCCCCCCCCCHHHHHHHHHCCCCCCCEEEEHHHHCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCE
T ss_conf 25789988980999999996478888355003011448999999999998669865258960334554436444331201
Q ss_pred CCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCC---CCCCCCCCCCHHHHHHHCCCHHHHHH
Q ss_conf 544200112205765444531135532136776527830698667654455---65523224514543432010036789
Q gi|254780489|r 159 FGDAAGAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNT---HDFYMRITNGADIFYNAVKIMAQSAK 235 (325)
Q Consensus 159 fGDgA~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~v~~~~~~~~~~~i~ 235 (325)
|||||+|+||++++ +..+++.+++.+++...+.+.++.+++..|..... .......++|+.+|+++.+++++.++
T Consensus 160 fGDGA~A~vl~~~~--~~~~il~~~~~t~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~ 237 (329)
T PRK07204 160 FGDGAAAVVITKGD--HSSSIIASHMETYSSGAHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYLMKFID 237 (329)
T ss_pred ECCCCEEEEEECCC--CCCCEEEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHH
T ss_conf 14651489995058--8884477997654797044111369854786323333466731760579999999862699999
Q ss_pred HHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEC
Q ss_conf 88997401200122463056541389999997197865700218540933000599999999980678999899999861
Q gi|254780489|r 236 QSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNSLKDFGNSSSASIPLSLSLENQRKPFQKGEKILTISCR 315 (325)
Q Consensus 236 ~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~l~~~GN~~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G 315 (325)
++|+++|++++|||||+|||+|+++++.+.++||||+||++.++++||||+|||+|++|++++++|++++||+|++++||
T Consensus 238 ~~L~~~gl~~~DId~~i~HQ~n~~~~~~i~~~lgip~ek~~~~~~~~GNt~sasipi~L~~~~~~g~i~~Gd~vll~~~G 317 (329)
T PRK07204 238 KLLMDTGYSLADIDLIVPHQASGPAMRLIRKKLGVDEERFMTIFEDYGNMISASIPVALFEAIKQKKVQRGNKILLLGTS 317 (329)
T ss_pred HHHHHCCCCHHHCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEE
T ss_conf 99987199978899899814888999999998096977621036311808988899999999984999996999999988
Q ss_pred CCCCCCCCCC
Q ss_conf 5510201019
Q gi|254780489|r 316 RGNDRGIYCL 325 (325)
Q Consensus 316 ~G~s~ga~lL 325 (325)
+|+|||+++|
T Consensus 318 aG~s~ga~l~ 327 (329)
T PRK07204 318 AGLSIGGILL 327 (329)
T ss_pred HHHHHHHEEE
T ss_conf 6741502037
No 6
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=0 Score=560.70 Aligned_cols=316 Identities=24% Similarity=0.331 Sum_probs=271.9
Q ss_pred CCEEEEEEEEECCCCCCCHHHHHH------------------------HHCCCHHHEEECCCCCEEEEECC---------
Q ss_conf 620999999735886138889998------------------------80999768311147508899489---------
Q gi|254780489|r 4 SSSCILGFGHAVPNQCIHNSIIER------------------------HLNLKLGVIEQKTGIKYRYWAEK--------- 50 (325)
Q Consensus 4 ~~~~I~g~g~~lP~~~i~n~~l~~------------------------~~~~~~~~i~~~tGI~~R~~~~~--------- 50 (325)
+|++|+|+|+|+|+++|||+||.+ .+++++|||.++|||++||++++
T Consensus 1 ~n~~I~g~G~y~P~~vvtN~dl~~~~~~~~~~~~~~~~~~~~~~~~e~~vdtsdeWI~~rtGI~~R~i~~~~g~~~~~~~ 80 (372)
T PRK07515 1 HNVVISGTGLYTPPESISNEELVESFNAYVDQFNAENAAAIEAGEVEALPPSSSEFIEKASGIKSRYVMEKEGILDPERM 80 (372)
T ss_pred CCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCHHC
T ss_conf 96199997887799510489999877655544200003332134310255675677664246467775235676660001
Q ss_pred ---------CC--CHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf ---------88--7999999999998643013222344258843100236887432211210023863334210123101
Q gi|254780489|r 51 ---------HE--TLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFL 119 (325)
Q Consensus 51 ---------~e--~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l 119 (325)
+| +.+|||++|+++||++||++|+|||+||++|+|||+.+|++|+.||++||++ ..+|||+.+|+||+
T Consensus 81 ~p~~~~~~~d~~~~~sdma~~AA~~AL~~Agi~~~dIDlIIvaT~tpd~~~PstA~~vq~~LG~~-~~afDi~aaCsGfv 159 (372)
T PRK07515 81 RPRIPERSNDELSIQAEMGVAAARQALERAGKTAADIDGVIVACSNMQRAYPAMAIEIQEALGIE-GFAFDMNVACSSAT 159 (372)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCHHHHHHHHHCCC-CEEHHHHCCCHHHH
T ss_conf 43333456643113799999999999998499989999999976888888972999999984898-42043614086899
Q ss_pred HHHHHHHHHHHCC-CCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC---CCCEEEEEEECCCCCCEEE
Q ss_conf 2567657887438-85058862012244446222443432544200112205765444---5311355321367765278
Q gi|254780489|r 120 YALVMADSYINSH-QKPVLIIAANLLSRRINLEDKDTAIIFGDAAGAVVLAPSPLKDK---SGILGIELTSDGSKYDLIK 195 (325)
Q Consensus 120 ~aL~~A~~~i~~g-~~~vLVv~~e~~S~~~d~~d~~~~~lfGDgA~A~il~~~~~~~~---~~il~~~~~s~~~~~~~~~ 195 (325)
+||++|.+||++| +|++|||++|++|+++||+||.++++|||||+|+||++.+.... .+++++.+.++ +.+...
T Consensus 160 yaL~~A~~~I~sg~~k~vLVVgaE~~S~~~d~~DR~t~~LFGDGAgAvvle~~~~~~~~~~~~il~~~~~t~--~s~~i~ 237 (372)
T PRK07515 160 FGIQTAANAIRSGSARRVLVVNPEICSGHLNFRDRDSHFIFGDVATAVIVERADTATSAGGFEILSTRLFTQ--FSNNIR 237 (372)
T ss_pred HHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCEEEECCCCCC--CCCCCC
T ss_conf 999999999971898747995342303362767877047761653024664114688877741566563466--566644
Q ss_pred EECCCCC--CCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHC---CC
Q ss_conf 3069866--765445565523224514543432010036789889974012001224630565413899999971---97
Q gi|254780489|r 196 IPTGGST--SPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKI---GL 270 (325)
Q Consensus 196 ~~~~~~~--~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~l---gi 270 (325)
.+.+... .+..... ...+..|+|++||+++++.+++.++++|+++|++++|||||+|||+|.+|++.++++| ++
T Consensus 238 ~~~g~~~~~~~~~~~~-~~~~~~m~G~~Vfk~av~~~~~~i~~~L~~~gl~~~DId~~v~HQAN~rii~~i~k~llg~~~ 316 (372)
T PRK07515 238 NNFGFLNRAEPEGAGD-ADKLFVQEGRKVFKEVCPMVAEHIVEHLAENGLTPADVKRLWLHQANINMNQLIGKKVLGRDA 316 (372)
T ss_pred CCCCCCCCCCCCCCCC-CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEECCCCHHHHHHHHHHHCCCCC
T ss_conf 5788667677678876-331114417899999999999999999998298988899998677899999999998545899
Q ss_pred CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCC
Q ss_conf 8657002185409330005999999999806789998999998615510201019
Q gi|254780489|r 271 SKRIMVNSLKDFGNSSSASIPLSLSLENQRKPFQKGEKILTISCRRGNDRGIYCL 325 (325)
Q Consensus 271 ~~~~~~~~l~~~GN~~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~G~s~ga~lL 325 (325)
|++|++.++++||||+|||+|++|++. .+++++||+|+|++||+|+|||+++|
T Consensus 317 ~~~k~~~~i~~yGNTssASiplaL~~~--~~~ik~Gd~vll~gfGaGltwGa~ll 369 (372)
T PRK07515 317 TPEEAPVILDEYANTSSAGSIIAFHKH--SDDLAAGDLGVICSFGAGYSIGSVIV 369 (372)
T ss_pred CHHHHEEHHHHCCCHHHHHHHHHHHHH--HCCCCCCCEEEEEEEEHHHHHHHHHE
T ss_conf 988832207411847888999999998--48678999899999877985687433
No 7
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=0 Score=552.53 Aligned_cols=322 Identities=35% Similarity=0.534 Sum_probs=304.9
Q ss_pred CCCCEEEEEEEEECCCCCCCHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEE
Q ss_conf 66620999999735886138889998809997683111475088994898879999999999986430132223442588
Q gi|254780489|r 2 IKSSSCILGFGHAVPNQCIHNSIIERHLNLKLGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTLL 81 (325)
Q Consensus 2 ~~~~~~I~g~g~~lP~~~i~n~~l~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~ 81 (325)
|.++++|+|+|+|+|+++|+|+|++++++++++||.+++||++||+++++|+++|||++|+|+||+++|++|+|||+||+
T Consensus 1 ~~~~~~I~g~g~ylP~~~v~n~~~~~~~~~~~~~i~~~~Gi~~R~~a~~~e~~~dma~~Aa~~aL~~ag~~~~dIdllI~ 80 (326)
T PRK12879 1 MMSYARITGWGKYVPPRVLTNDDLATFIDTSDEWIVQRTGIKERRIAHVNEFTSDLAIKAAERALARAGLDASDIDLIIV 80 (326)
T ss_pred CCCCCEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEE
T ss_conf 99777899999988996585999998809988899864496489988999999999999999999975979889969999
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCEEEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 431002368874322112100238633342101231012567657887438-8505886201224444622244343254
Q gi|254780489|r 82 ATSTPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYINSH-QKPVLIIAANLLSRRINLEDKDTAIIFG 160 (325)
Q Consensus 82 ~s~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~g-~~~vLVv~~e~~S~~~d~~d~~~~~lfG 160 (325)
+|++||+..|++|++||++||++++.+|||+++|+||++||++|..++++| .+++|||++|++|+.+|+.++.+.++||
T Consensus 81 ~t~~~d~~~P~~a~~v~~~LGl~~~~~fdi~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~e~~s~~~d~~~~~~~~lfG 160 (326)
T PRK12879 81 ATTTPDYLFPSTASQVQARLGIPNAAAFDINAACSGFLYGLELANGLITSGSYKKVLVIGAERLSKYTDWTDRTTAILFG 160 (326)
T ss_pred ECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHCCCCCCCCCHHHHHCCC
T ss_conf 52678982775999999986849951454012203799999999999866875503650202213532435433321017
Q ss_pred CCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 42001122057654445311355321367765278306986676544556552322451454343201003678988997
Q gi|254780489|r 161 DAAGAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRK 240 (325)
Q Consensus 161 DgA~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~ 240 (325)
|||+|+||++++ +..+++.+.+.++++.++.+..+.++...+........+...++|+++|+++.+.+++.++++|++
T Consensus 161 DGAaA~ll~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~ 238 (326)
T PRK12879 161 DGAGAVVVEATE--EPPGLIDYVLGTDGDGGDILYRTGLGTTMDRFDLDNGGFYFQFNGREVFKWAVRGMPKAAKQVLEK 238 (326)
T ss_pred CCCEEEEEEECC--CCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 863389987248--888347899985377766588347887688755335675078642999999987569999999998
Q ss_pred HCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC
Q ss_conf 40120012246305654138999999719786570021854093300059999999998067899989999986155102
Q gi|254780489|r 241 SDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNSLKDFGNSSSASIPLSLSLENQRKPFQKGEKILTISCRRGNDR 320 (325)
Q Consensus 241 ~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~l~~~GN~~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~G~s~ 320 (325)
+|++++|||||++||+|+++++.++++||+|+||++.++++||||+|||+|++|++++++++++|||+|++++||+|+||
T Consensus 239 ~gl~~~did~~i~Hq~~~~~~~~i~~~Lgl~~~k~~~~l~~~GN~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~ 318 (326)
T PRK12879 239 AGLTKDDIDWVIPHQANLRIIESLCEKLGIPLEKTLVNVEYYGNTSAATIPLALCLALEQGKIKPGDTLLLYGFGAGLTW 318 (326)
T ss_pred CCCCHHHCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHHHHH
T ss_conf 59997788989986887899999999809798885656732274377789999999997399999699999999167322
Q ss_pred CCCCC
Q ss_conf 01019
Q gi|254780489|r 321 GIYCL 325 (325)
Q Consensus 321 ga~lL 325 (325)
|++++
T Consensus 319 ~~~~~ 323 (326)
T PRK12879 319 AALLV 323 (326)
T ss_pred EEEEE
T ss_conf 48999
No 8
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=100.00 E-value=0 Score=550.51 Aligned_cols=318 Identities=33% Similarity=0.506 Sum_probs=293.0
Q ss_pred EEEEEEEEECCCCCCCHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEE
Q ss_conf 09999997358861388899988099976831114750889948988799999999999864301322234425884310
Q gi|254780489|r 6 SCILGFGHAVPNQCIHNSIIERHLNLKLGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTLLATST 85 (325)
Q Consensus 6 ~~I~g~g~~lP~~~i~n~~l~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t 85 (325)
++|+|+|+|+|+++|+|+|++++++.+++||.++|||++|||++++|++++||++|+++||+++|++|+|||+||++|++
T Consensus 1 v~I~g~g~ylP~~~v~n~e~~~~~~~~~~~i~~~tGI~~R~~~~~~e~~sdma~~Aa~~aL~~ag~~~~dIDllI~~t~t 80 (327)
T CHL00203 1 VHILSTGSSVPNFSIENQQFSQIVETSDEWISTRTGIKKRRLAGSSTSLTKLAAEAANKALHKAGWSAKDIDLIILATST 80 (327)
T ss_pred CEEEEEEEECCCCEECHHHHHHHCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCC
T ss_conf 97999999789917849999987299868885457940797789999999999999999997549997898889995004
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCEEEEEEECCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 02368874322112100238633342101231012567657887438-85058862012244446222443432544200
Q gi|254780489|r 86 PDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYINSH-QKPVLIIAANLLSRRINLEDKDTAIIFGDAAG 164 (325)
Q Consensus 86 ~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~g-~~~vLVv~~e~~S~~~d~~d~~~~~lfGDgA~ 164 (325)
||++. +.|+.||++||++++.+|||+++|+||++||++|..|+++| .+++|||++|++|+.+|++++.+.++|||||+
T Consensus 81 pd~~~-~~a~~v~~~LG~~~~~afDv~~aC~g~~~al~~A~~~i~sg~~~~~LvV~~E~~S~~~~~~~~~~~~~fGDgA~ 159 (327)
T CHL00203 81 PDDLF-GSASQLQAEIGATQAVAFDITAACSGFIFALVTAGQFIQSGSYRNILIIGADTLSRWIDWSDRRTCILFGDGAG 159 (327)
T ss_pred CCCCC-CHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHCCCCCE
T ss_conf 67678-76999999858998637655200447999999999998569845147851432357656464545311378524
Q ss_pred EEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCC----CCCCCCCCCCHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 112205765444531135532136776527830698667654455----6552322451454343201003678988997
Q gi|254780489|r 165 AVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNT----HDFYMRITNGADIFYNAVKIMAQSAKQSLRK 240 (325)
Q Consensus 165 A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~ 240 (325)
|++|++.+.. +.+++.+.+.++++.++.+.+..++...+..... .......++|+++|+++++.+++.++++|++
T Consensus 160 A~il~~~~~~-~~~~l~~~~~tdg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~ 238 (327)
T CHL00203 160 AVAIGECPTE-ENSILGFKLCTDGSLNSHLQLMNKPDNMQLFNQTKYPMGGFNSISMNGKEVYKFAVFQVPAVIQECLNA 238 (327)
T ss_pred EEEEEECCCC-CCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8987404677-784478999866777761787247877665676656678854278755999999999999999999987
Q ss_pred HCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC
Q ss_conf 40120012246305654138999999719786570021854093300059999999998067899989999986155102
Q gi|254780489|r 241 SDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNSLKDFGNSSSASIPLSLSLENQRKPFQKGEKILTISCRRGNDR 320 (325)
Q Consensus 241 ~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~l~~~GN~~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~G~s~ 320 (325)
+|++++|||||++||+|+++++.++++|++|++|++.++++||||+|||+|++|++++++++++|||+|+|++||+|+||
T Consensus 239 ~g~~~~did~~v~HQ~~~~~~~~i~~~lgl~~~k~~~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~g~G~G~s~ 318 (327)
T CHL00203 239 LNISIDEVDWLLLHQANQRILEAVADRLSIPHSKMITNLEHYGNTSAASIPLALDEAIKDNKIQPGQIIVLSGFGAGLTW 318 (327)
T ss_pred CCCCCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEHHHHH
T ss_conf 69981118879988688999999999819797886654764496688899999999998499999899999998557202
Q ss_pred CCCCC
Q ss_conf 01019
Q gi|254780489|r 321 GIYCL 325 (325)
Q Consensus 321 ga~lL 325 (325)
|+++|
T Consensus 319 g~~~~ 323 (327)
T CHL00203 319 GAIVL 323 (327)
T ss_pred EEEEE
T ss_conf 68999
No 9
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00 E-value=0 Score=545.95 Aligned_cols=319 Identities=40% Similarity=0.633 Sum_probs=306.9
Q ss_pred CEEEEEEEEECCCCCCCHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
Q ss_conf 20999999735886138889998809997683111475088994898879999999999986430132223442588431
Q gi|254780489|r 5 SSCILGFGHAVPNQCIHNSIIERHLNLKLGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTLLATS 84 (325)
Q Consensus 5 ~~~I~g~g~~lP~~~i~n~~l~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~ 84 (325)
+++|+|+|+|+|+++|+|+|++++++++++||++++||++||+++++|++++||++|+|+||++++++|+|||+||++|+
T Consensus 1 ~~~I~~~g~y~P~~~v~n~~~~~~~g~~~~~i~~~~Gi~~R~~a~~~e~~~~ma~~Aa~~aL~~ag~~~~dIdlli~~s~ 80 (320)
T cd00830 1 NARILGIGSYLPERVVTNDELEKRLDTSDEWIRTRTGIRERRIADPGETTSDLAVEAAKKALEDAGIDADDIDLIIVATS 80 (320)
T ss_pred CCEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
T ss_conf 97899999977993784999998869898999870297489988999999999999999999866989567888999415
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCEEEEEEECCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 002368874322112100238633342101231012567657887438-8505886201224444622244343254420
Q gi|254780489|r 85 TPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYINSH-QKPVLIIAANLLSRRINLEDKDTAIIFGDAA 163 (325)
Q Consensus 85 t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~g-~~~vLVv~~e~~S~~~d~~d~~~~~lfGDgA 163 (325)
+||+..|++|++|+++||++++.+|||+++|+||++||++|..++++| .+++|||++|.+|+.+|+.|+.+.++|||||
T Consensus 81 ~~~~~~P~~a~~v~~~LGl~~~~~fdi~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~e~~s~~~~~~~~~~~~lfGDga 160 (320)
T cd00830 81 TPDYLFPATACLVQARLGAKNAAAFDINAACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLSRILDWTDRSTAVLFGDGA 160 (320)
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHCCCCCCCCCCHHHCCCCCC
T ss_conf 68986883999999996889972251045511589999999999855987616998413422554546621111037863
Q ss_pred EEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCC
Q ss_conf 01122057654445311355321367765278306986676544556552322451454343201003678988997401
Q gi|254780489|r 164 GAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDL 243 (325)
Q Consensus 164 ~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl 243 (325)
+|+||++.+. ..+++.+.+.|++++++.+.++.++...+............++++++|+++.+.+++.++++|+++|+
T Consensus 161 aA~ll~~~~~--~~~i~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~ 238 (320)
T cd00830 161 GAVVLEATEE--DPGILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEKAGL 238 (320)
T ss_pred EEEEEEECCC--CCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 4899962488--88424689997068865268458976677643335676179732899998876569999999998599
Q ss_pred CCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC
Q ss_conf 20012246305654138999999719786570021854093300059999999998067899989999986155102010
Q gi|254780489|r 244 QPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNSLKDFGNSSSASIPLSLSLENQRKPFQKGEKILTISCRRGNDRGIY 323 (325)
Q Consensus 244 ~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~l~~~GN~~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~G~s~ga~ 323 (325)
+++|||||++||+|+++++.++++||||+||++.++++||||++||+|++|++++++++++|||+|++++||+|+|||++
T Consensus 239 ~~~did~~v~Hq~~~~~~~~~~~~lgi~~~k~~~~~~~~GN~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~g~~ 318 (320)
T cd00830 239 TPDDIDWFVPHQANLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEAIEEGKLKKGDLVLLLGFGAGLTWGAA 318 (320)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHH
T ss_conf 91016579970687899999999809698996756851075587689999999997499998599999998045325320
Q ss_pred CC
Q ss_conf 19
Q gi|254780489|r 324 CL 325 (325)
Q Consensus 324 lL 325 (325)
+|
T Consensus 319 ~l 320 (320)
T cd00830 319 LL 320 (320)
T ss_pred HC
T ss_conf 29
No 10
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=0 Score=548.57 Aligned_cols=314 Identities=27% Similarity=0.400 Sum_probs=283.9
Q ss_pred CCEEEEEEEEECCCCCCCHHHHHHHHCCCH----HHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 620999999735886138889998809997----6831114750889948988799999999999864301322234425
Q gi|254780489|r 4 SSSCILGFGHAVPNQCIHNSIIERHLNLKL----GVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLT 79 (325)
Q Consensus 4 ~~~~I~g~g~~lP~~~i~n~~l~~~~~~~~----~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~i 79 (325)
.+++|.|+|+|+|+++|+|+|+.+.+..++ +|+.++|||++||+++++|+++|||++|+++||++++++|+|||+|
T Consensus 6 ~~akI~G~g~~vP~~~v~n~d~~~~~~~~d~~~~~~~~~~tGI~~R~~a~~~~~~sdla~~AA~~AL~~a~i~~~dID~I 85 (353)
T PRK12880 6 DKAKISGICVSVPEHKICIDDELESVFSNDIKTLKRMKKVIGLNTRYICDENTCVSDLGKHAANTLLQGLNIDKNSLDAL 85 (353)
T ss_pred CCCEEEEEEEECCCCEECCHHHHHHHCCCCHHHHEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEE
T ss_conf 44089999997799764147988765387467763342455845477879998699999999999999759998899999
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 8843100236887432211210023-863334210123101256765788743885058862012244446222443432
Q gi|254780489|r 80 LLATSTPDHLLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADSYINSHQKPVLIIAANLLSRRINLEDKDTAII 158 (325)
Q Consensus 80 i~~s~t~d~~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~~i~~g~~~vLVv~~e~~S~~~d~~d~~~~~l 158 (325)
|++|+||||.+|++|+.||++||++ ++.||||+.+|+||++||++|..+|++|.+++|||++|.+|+++||+||.++++
T Consensus 86 I~aT~tpD~~~PstA~~vq~~LGl~~~~~AfDI~~aCsGfvyaL~~A~~~I~sg~~kvLlV~~e~~S~~id~~dr~t~~L 165 (353)
T PRK12880 86 IVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLGQACAGYLYGLFVAHSLIQSGLGKILLICGDTLSKFIHPKNMNLAPI 165 (353)
T ss_pred EEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHCCCCCHHHCCEEEE
T ss_conf 99737889088847899999809998850887454434699999999999981987489992267536778220551032
Q ss_pred CCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCC-----------CCCCCCCCCCHHHHHHHC
Q ss_conf 544200112205765444531135532136776527830698667654455-----------655232245145434320
Q gi|254780489|r 159 FGDAAGAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNT-----------HDFYMRITNGADIFYNAV 227 (325)
Q Consensus 159 fGDgA~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~g~~v~~~~~ 227 (325)
|||||+|+||++.+..+ .+ ..+.+++++++.+.+|.++.+.|..... +......|+|++||++++
T Consensus 166 FGDgAgA~vl~~~~~~~--~~--~~l~sdG~~~d~l~i~~gg~~~p~~~~~~~~~~~~~~~~~~~~~l~MdG~~Vf~~av 241 (353)
T PRK12880 166 FGDGVSATLIEKTDFNE--AF--FELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGANIFNMAL 241 (353)
T ss_pred ECCCCEEEEEECCCCCC--CE--EEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHH
T ss_conf 05774368873046786--42--898048888773784688655877555577532244334555533436589999999
Q ss_pred CCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHH-HHHHCCCCCCCHHHHHHHHHHHHCCCCCC
Q ss_conf 10036789889974012001224630565413899999971978657002-18540933000599999999980678999
Q gi|254780489|r 228 KIMAQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVN-SLKDFGNSSSASIPLSLSLENQRKPFQKG 306 (325)
Q Consensus 228 ~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~-~l~~~GN~~sAsi~~~L~~~~~~g~i~~G 306 (325)
+.+|+.++++|+++|++++|||+|+|||+|.+|++.++++||+|+||++. ++++||||+|||||++|+++.+.+++
T Consensus 242 ~~vp~~i~~~L~~agl~~~DId~~v~HQAN~riie~i~k~Lgl~~ek~~~~~~~~yGNTssASIPiaL~e~~~~~~~--- 318 (353)
T PRK12880 242 ECEPKSFKEILEFSKVDEKDIAFHLFHQSNAYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLPALLCELDTPKEF--- 318 (353)
T ss_pred HHHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC---
T ss_conf 99999999999983999788656865468899999999980989787030055533958999999999999874998---
Q ss_pred CEEEEEEECCCCCCCCCCC
Q ss_conf 8999998615510201019
Q gi|254780489|r 307 EKILTISCRRGNDRGIYCL 325 (325)
Q Consensus 307 d~vll~~~G~G~s~ga~lL 325 (325)
+++|++||+|+|||+++|
T Consensus 319 -k~~L~gFGaGltwg~~ll 336 (353)
T PRK12880 319 -KASLSAFGAGLSWGSAVL 336 (353)
T ss_pred -EEEEEEEEHHHHHEEEEE
T ss_conf -446999835741238889
No 11
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=0 Score=543.65 Aligned_cols=321 Identities=22% Similarity=0.263 Sum_probs=277.8
Q ss_pred CEEEEEEEEECCCCCCCHHHHHHHH-------CCCHHHEEECCCCCEEEEE-----CCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 2099999973588613888999880-------9997683111475088994-----898879999999999986430132
Q gi|254780489|r 5 SSCILGFGHAVPNQCIHNSIIERHL-------NLKLGVIEQKTGIKYRYWA-----EKHETLTDIAIQAGDIALRNANIK 72 (325)
Q Consensus 5 ~~~I~g~g~~lP~~~i~n~~l~~~~-------~~~~~~i~~~tGI~~R~~~-----~~~e~~~~la~~Aa~~aL~~a~~~ 72 (325)
+++|+|+|+|+|+++|+|+|+++++ +++++||.++|||++|||+ .++|++++||++|+|+||++||++
T Consensus 2 ~v~I~g~G~ylP~~vvtN~el~~~~~~~~~~~~~~~~~I~~rtGI~~Rr~a~~~~~~~~et~sdma~~Aa~~AL~~Agi~ 81 (378)
T PRK06816 2 NVYITSTGAFLPGEPVDNDEMEAYLGLINGRPSRLRRIILRNNGIKTRHYAIDPTGETTHSNAQMAAHAIRDLLDDAGFG 81 (378)
T ss_pred CCEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCC
T ss_conf 63999999978998255899999864157887748889775458213787407888876678999999999999975999
Q ss_pred CCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCEEEEEEECCCCCCCCCC
Q ss_conf 223442588431002368874322112100238633342101231012567657887438-8505886201224444622
Q gi|254780489|r 73 KDSISLTLLATSTPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYINSH-QKPVLIIAANLLSRRINLE 151 (325)
Q Consensus 73 ~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~g-~~~vLVv~~e~~S~~~d~~ 151 (325)
|+|||+||++|+|||+.+|++|++||++||++++.+||++++|+||++||++|..+|++| +|++|||++|++|+++++.
T Consensus 82 ~~dIDliI~aT~tpd~~~P~tA~~Vq~~LGl~~~~~fDi~~aCsgf~~aL~~A~~~I~sG~~k~vLVV~aE~~S~~l~~~ 161 (378)
T PRK06816 82 LEDVELLACGTSQGDQLMPGHAVMVHGELGNPPCEVVSFHGVCAAGMMALKYAYLSVKAGESSNAVATASELASRLFRAS 161 (378)
T ss_pred HHHCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHCCC
T ss_conf 89999999966868987854899999981899854032110123789999999999974898879999344011210343
Q ss_pred ------------CCCCCC---------CCCCCEEEEEECCCCCCCCC--CCEEEEEEECCCCCCEEEEECCCCCCCCC--
Q ss_conf ------------244343---------25442001122057654445--31135532136776527830698667654--
Q gi|254780489|r 152 ------------DKDTAI---------IFGDAAGAVVLAPSPLKDKS--GILGIELTSDGSKYDLIKIPTGGSTSPAG-- 206 (325)
Q Consensus 152 ------------d~~~~~---------lfGDgA~A~il~~~~~~~~~--~il~~~~~s~~~~~~~~~~~~~~~~~~~~-- 206 (325)
|+.+.+ +|||||+|+||++++..++. .+....+.+++..++.|...++.......
T Consensus 162 ~~~~~~~~~~~~d~~~~~~f~~~fl~~lfGDGAgA~vl~~~~~~~g~~~~i~~~~~~s~~~~~~~~~~~G~~~~~~~~~~ 241 (378)
T PRK06816 162 RYEAEEERVEELEEGPEIAFEKDFLRWMLSDGAGAVLLENKPRPGGLSLRIDWIDLFSFADEFPVCMYAGADKNEDGELK 241 (378)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCEECCCCCCCCCCCC
T ss_conf 22321122220124410033200135555666636997643888874345431014554555663021476667787657
Q ss_pred ---------CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHC-----CCCH
Q ss_conf ---------45565523224514543432010036789889974012001224630565413899999971-----9786
Q gi|254780489|r 207 ---------TNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKI-----GLSK 272 (325)
Q Consensus 207 ---------~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~l-----gi~~ 272 (325)
..........++++.+++++.+.+++.++++|+++|++++|||||+|||+|.++++.+++.| ++|+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~L~~~gl~~~dId~~vpHQAn~ri~~~v~~~l~~~g~~ip~ 321 (378)
T PRK06816 242 GWSDYSPAEAEAAGALALKQDVRLLNEVIVVWGVDPYLELVDKRRLDPDAIDHFLPHYSSEYFREKIVELLAKAGLMIPE 321 (378)
T ss_pred CCCCCCHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEECCCCHHHHHHHHHHHHHHCCCCCCH
T ss_conf 74447877775335401112589999999999999999999984999899888812610599999999998753589986
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCC-CCCCCCCC
Q ss_conf 570021854093300059999999998067899989999986155-10201019
Q gi|254780489|r 273 RIMVNSLKDFGNSSSASIPLSLSLENQRKPFQKGEKILTISCRRG-NDRGIYCL 325 (325)
Q Consensus 273 ~~~~~~l~~~GN~~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~G-~s~ga~lL 325 (325)
||++.++++||||+|||+|++|++++++|+|||||+|||+++|+| ||||++||
T Consensus 322 ek~~~~v~~~GNT~sASiPiaL~~a~~~g~ik~Gd~vll~~~~sg~~~~g~~ll 375 (378)
T PRK06816 322 EKWFTNLATVGNTGSASIFIMLDELFRSGRLKPGQTILCFVPESGRFSAAFMLL 375 (378)
T ss_pred HHHEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHEEEEE
T ss_conf 661601423270799999999999998499999999999962476761546999
No 12
>PRK06840 hypothetical protein; Validated
Probab=100.00 E-value=0 Score=534.65 Aligned_cols=321 Identities=22% Similarity=0.346 Sum_probs=291.2
Q ss_pred CCCCEEEEEEEEECCCCCCCHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEE
Q ss_conf 66620999999735886138889998809997683111475088994898879999999999986430132223442588
Q gi|254780489|r 2 IKSSSCILGFGHAVPNQCIHNSIIERHLNLKLGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTLL 81 (325)
Q Consensus 2 ~~~~~~I~g~g~~lP~~~i~n~~l~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~ 81 (325)
|+.+++|+|+|+|+|+++|+|+|++++++++++||.++|||++||+++++|+++|||++|+++||+++|++|+|||+||+
T Consensus 1 m~~~v~I~~~G~ylP~~~v~n~e~~~~~~~~~e~i~~rtGI~~Rr~a~~~e~~~dma~~Aa~~aL~~ag~~~~dIdliI~ 80 (337)
T PRK06840 1 MKMNVGIVSTGVYLPKDVMTAEEIAKKTGIPEEVIIEKFGILEKPIPGPEDHTSDMAIAAAKPALKQAGIDPEAIDLVIY 80 (337)
T ss_pred CCCCEEEEEEEEECCCCEECHHHHHHHCCCCHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEE
T ss_conf 97510999999978997366999998739987998546586168578999989999999999999974989678878999
Q ss_pred -EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC--CCEEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf -431002368874322112100238633342101231012567657887438--85058862012244446222443432
Q gi|254780489|r 82 -ATSTPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYINSH--QKPVLIIAANLLSRRINLEDKDTAII 158 (325)
Q Consensus 82 -~s~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~g--~~~vLVv~~e~~S~~~d~~d~~~~~l 158 (325)
+|.+||+..|++|++||++||++++.+|||+++|+||++||++|..++.++ .+++|||++|..|+.+||+|+.+.++
T Consensus 81 ~~t~~~d~~~ps~A~~vq~~LG~~~a~afDi~~aC~gf~~aL~~A~~~l~a~~~~~~vLvv~~e~~s~~i~~~~~~~~~~ 160 (337)
T PRK06840 81 IGEEHKDYPVWTAAPKIQHEIGAKNAWAFDIMARCGTFPVALKVAKDLMLADPNINNVLLVGGYRNSDLVDYDNPRSRFM 160 (337)
T ss_pred EECCCCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEE
T ss_conf 93689897884199999998589996078713320179999999999987165531478601432465556689885169
Q ss_pred C--CCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCC--CCCCCCHH-----HHHHHCCC
Q ss_conf 5--442001122057654445311355321367765278306986676544556552--32245145-----43432010
Q gi|254780489|r 159 F--GDAAGAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFY--MRITNGAD-----IFYNAVKI 229 (325)
Q Consensus 159 f--GDgA~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~-----v~~~~~~~ 229 (325)
| ||||+|++|++++ ++.+++++.+.|++++++.+.++.++.+.|...+..+.. ...+.+.. +...+.+.
T Consensus 161 f~~GDga~A~ll~~~~--~~~~il~~~~~tdg~~~~~~~~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 238 (337)
T PRK06840 161 FNLGAGGSAALLKKNY--GKNRVLGSAIITDGSFSEDVRVPAGGTKQPASYETVDNRQHYLDVLDPESMKERLDPVSIPN 238 (337)
T ss_pred EEECCCCEEEEEECCC--CCCCEEEEEECCCCCCHHCEEEECCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHH
T ss_conf 9705883479984168--88705766621257531216871387568887445345421586310388887768899988
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEE
Q ss_conf 03678988997401200122463056541389999997197865700218540933000599999999980678999899
Q gi|254780489|r 230 MAQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNSLKDFGNSSSASIPLSLSLENQRKPFQKGEKI 309 (325)
Q Consensus 230 ~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~l~~~GN~~sAsi~~~L~~~~~~g~i~~Gd~v 309 (325)
++++++++|+++|++++|||||++||+|.++++.+.++||+|+||+. ++++||||++||+|++|++++++|++++||+|
T Consensus 239 ~~~~i~~~L~~~gl~~~DId~~~~hq~~~~~~~~~~~~lgi~~~k~~-~~~~~GNt~sasiplaL~~a~~~g~l~~Gd~v 317 (337)
T PRK06840 239 FYKVIREALRKSGYTPKDIDYLAILHMKRSAHIAVLEGLGLTEEQTI-YLEEYGHMGQIDQILSLHLALEQGKLKDGDLV 317 (337)
T ss_pred HHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHHCCCHHHEE-ECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 99999999998499957868888853379999999998299754348-60267731777899999999980999995999
Q ss_pred EEEEECCCCCCCCCCC
Q ss_conf 9998615510201019
Q gi|254780489|r 310 LTISCRRGNDRGIYCL 325 (325)
Q Consensus 310 ll~~~G~G~s~ga~lL 325 (325)
+|++||+|+|||++++
T Consensus 318 ll~g~G~G~s~g~~v~ 333 (337)
T PRK06840 318 VLVSAGTGYTWAATVI 333 (337)
T ss_pred EEEEEEHHHHHEEEEE
T ss_conf 9999994521258999
No 13
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=0 Score=534.01 Aligned_cols=311 Identities=20% Similarity=0.312 Sum_probs=275.9
Q ss_pred EEEEEEEEECCCCCCCHHHHHHHH-------CCCHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCE
Q ss_conf 099999973588613888999880-------9997683111475088994898879999999999986430132223442
Q gi|254780489|r 6 SCILGFGHAVPNQCIHNSIIERHL-------NLKLGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISL 78 (325)
Q Consensus 6 ~~I~g~g~~lP~~~i~n~~l~~~~-------~~~~~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ 78 (325)
|+|+|+|+|||+++|||+|+++++ +++.+||+++|||++|||++++|+++|||++|+++||+++|++|+|||+
T Consensus 1 v~I~~~g~ylP~~~vtn~el~~~~~~~~~~~~~~~~~i~~~tGI~~Rr~a~~~e~~sdma~~Aa~~AL~~agi~p~dIDl 80 (339)
T PRK09258 1 VFINSLAYELAPVVVTSSEIESRLAPLYQRLRIPMGQLEALTGIRERRWWPKGHQLSDGATEAARKALAEAGIDASDIGL 80 (339)
T ss_pred CEEEEEEEECCCCCCCHHHHHHHHCCCHHHHCCCCCHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCE
T ss_conf 98989998779961748999977533045425871132334673035367999988999999999999975999899999
Q ss_pred EEEEEEEECCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCEEEEEEECCCCCCCCCC-----
Q ss_conf 58843100236887432211210023-8633342101231012567657887438-8505886201224444622-----
Q gi|254780489|r 79 TLLATSTPDHLLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADSYINSH-QKPVLIIAANLLSRRINLE----- 151 (325)
Q Consensus 79 ii~~s~t~d~~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~~i~~g-~~~vLVv~~e~~S~~~d~~----- 151 (325)
||++|++|||.+|++|++||++||++ ++.+|||+.+|+||++||++|..+|++| .+++|||++|..|+++|+.
T Consensus 81 lI~at~tpd~~~P~tA~~v~~~LGl~~~~~afDi~~aCsGf~~aL~~A~~~i~sg~~~~~LvV~aE~~s~~~d~~~~~~~ 160 (339)
T PRK09258 81 LINTSVCRDQLEPATACRVHAELGLSKDCAIFDISNACLGFLNGMLDAANMIELGQIDYGLVVSGESARDIVEATIARML 160 (339)
T ss_pred EEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCC
T ss_conf 99905114853781899999984799874786510431679999999999997699988999975412100244432102
Q ss_pred -----------CCCCCCCCCCCEEEEEECCCCCCC-CCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -----------244343254420011220576544-45311355321367765278306986676544556552322451
Q gi|254780489|r 152 -----------DKDTAIIFGDAAGAVVLAPSPLKD-KSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNG 219 (325)
Q Consensus 152 -----------d~~~~~lfGDgA~A~il~~~~~~~-~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 219 (325)
+....++|||||+|++|++.+..+ ...+++....+.+++++.|... . .........++|
T Consensus 161 ~~~~~~~~~f~~~~a~~~~GdGA~A~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------~~~~~~~~~~dg 231 (339)
T PRK09258 161 ADPTMTRQNFAQSLATLTLGSGAVAVVLTRGSLVPRAHRLLGGVTRAATEHHQLCQGG---L------DEAGHGLMRTDA 231 (339)
T ss_pred CCCCCHHHHCCCCCCCEECCCCEEEEEEECCCCCCCCCEEECCCCCCCCCHHHCCCCC---C------CCCCCCCEEECH
T ss_conf 4666203330221110421662179999536778888645145545772100102478---8------878765565358
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 45434320100367898899740120012246305654138999999719786570021854093300059999999998
Q gi|254780489|r 220 ADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNSLKDFGNSSSASIPLSLSLENQ 299 (325)
Q Consensus 220 ~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~l~~~GN~~sAsi~~~L~~~~~ 299 (325)
+.+|+++++.+++.++++|+++|++++|||+|+|||+|.++++.++++||+|+||++.++++||||+|||+|++|+++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~L~~~gl~~~dId~~v~HQan~~~~~~i~~~Lgi~~ek~~~~~~~~GNT~sASiPlaL~~a~~ 311 (339)
T PRK09258 232 VLLLKEGVELAVDTWEAFLQQLGWSVEQVDKVVCHQVGAAHTRAVLKALGIDPEKVFPTFPLLGNMGPVSLPITLAMAAE 311 (339)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHCCCCHHHHHCHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999839998998899862576999999999819687771031864586898999999999998
Q ss_pred HCCCCCCCEEEEEEECCCCCCCCCCC
Q ss_conf 06789998999998615510201019
Q gi|254780489|r 300 RKPFQKGEKILTISCRRGNDRGIYCL 325 (325)
Q Consensus 300 ~g~i~~Gd~vll~~~G~G~s~ga~lL 325 (325)
+|++++||+|+|++||+|++||+++|
T Consensus 312 ~g~ik~Gd~vll~~~GaGl~~~~~~~ 337 (339)
T PRK09258 312 QGFLKKGDRVALLGIGSGLNCSMLGI 337 (339)
T ss_pred CCCCCCCCEEEEEEEEHHHHHHHHEE
T ss_conf 29999979999998847876556737
No 14
>PRK04262 hypothetical protein; Provisional
Probab=100.00 E-value=0 Score=459.91 Aligned_cols=301 Identities=22% Similarity=0.263 Sum_probs=246.3
Q ss_pred CEEEEEEEEECCCCCCCHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
Q ss_conf 20999999735886138889998809997683111475088994898879999999999986430132223442588431
Q gi|254780489|r 5 SSCILGFGHAVPNQCIHNSIIERHLNLKLGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTLLATS 84 (325)
Q Consensus 5 ~~~I~g~g~~lP~~~i~n~~l~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~ 84 (325)
++.|+|+|.|+|+++|+|+|+++.++++++||.++|||++||+++++|++++||++|+++||++++++|+|||+||++|+
T Consensus 2 ~vgI~g~G~YlP~~~v~n~el~~~~~~~~ewI~~rtGI~~R~va~~dE~t~~lA~~AA~~aL~~agi~~~dIdlIi~aT~ 81 (346)
T PRK04262 2 MVGIVGYGAYIPRYRIKVEEIARVWGDDPEAIKKGLGVEEKSVPGPDEDTATIAVEAARNALKRAGIDPKEIGAVYVGSE 81 (346)
T ss_pred CCEEEEEEEECCCEEECHHHHHHHHCCCHHHHEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEEC
T ss_conf 21798999958996884999998859996473136685078778999999999999999999875999778898999647
Q ss_pred EECCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCEEEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00236887432211210023-8633342101231012567657887438-850588620122444462224434325442
Q gi|254780489|r 85 TPDHLLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADSYINSH-QKPVLIIAANLLSRRINLEDKDTAIIFGDA 162 (325)
Q Consensus 85 t~d~~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~~i~~g-~~~vLVv~~e~~S~~~d~~d~~~~~lfGDg 162 (325)
|||+..|++|+.||++||++ ++.+||++.+|+||++||++|.+||++| .+++|||++|+.+. ++.+.. -+..|||
T Consensus 82 Tpd~~~pstA~~vq~~LGl~~~~~afDi~aaCsGf~~aL~~A~~~I~sg~~~~~LVV~aD~~~~--~~~~~~-e~~~GaG 158 (346)
T PRK04262 82 SHPYAVKPTATIVAEALGATPDLTAADLEFACKAGTAALQAAMGLVKSGMIKYALAIGADTAQG--APGDAL-EYTAAAG 158 (346)
T ss_pred CCCCCCCCHHHHHHHHHCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC--CCCCEE-EECCCCC
T ss_conf 8886676506899998389988059861022114999999999999739997699983133347--874056-6668887
Q ss_pred EEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHC
Q ss_conf 00112205765444531135532136776527830698667654455655232245145434320100367898899740
Q gi|254780489|r 163 AGAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSD 242 (325)
Q Consensus 163 A~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~g 242 (325)
|+|++++.++... .+......+ .+..+.++ ..+...|... .+ ..+... ..+.+++.++++|+++|
T Consensus 159 a~A~~~g~~~~~~--~~~~~~~~~-~~~~d~~r--~~~~~~~~~~------~~-~~~~~~---~~~~~~~~~~~~l~~~g 223 (346)
T PRK04262 159 GAAFIIGAEEVIA--EIEATYSYV-TDTPDFWR--REGEPYPRHG------ER-FTGEPA---YFKHIISAAKGLMEKLG 223 (346)
T ss_pred EEEEEECCCCCCE--EECCCCCCC-CCCCCCCC--CCCCCCCCCC------CC-EECCEE---HHHHHHHHHHHHHHHCC
T ss_conf 6999987799733--745633445-78742205--6998242307------71-625232---79999999999999829
Q ss_pred CCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHH--HHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC
Q ss_conf 1200122463056541389999997197865700218--54093300059999999998067899989999986155102
Q gi|254780489|r 243 LQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNSL--KDFGNSSSASIPLSLSLENQRKPFQKGEKILTISCRRGNDR 320 (325)
Q Consensus 243 l~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~l--~~~GN~~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~G~s~ 320 (325)
++++|||||||||+|.+|++.++++||+|+||++.++ ++||||++||||++|.++++++ +|||+|+|++||+|...
T Consensus 224 ~~~~did~~v~HQAn~rii~~~~k~Lgi~~ekv~~nl~~~~~GNTssASiplaL~~~l~~~--k~Gd~Ill~~fG~G~~~ 301 (346)
T PRK04262 224 TKPSDYDYAVFHQPNGKFPLRAAKMLGFTKEQVKPGLLTPYIGNTYSASALLGLAAVLDVA--KPGDRILVVSFGSGAGS 301 (346)
T ss_pred CCHHHCCEEECCCCCHHHHHHHHHHCCCCHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHCC--CCCCEEEEEEECCCCCE
T ss_conf 9978858895167657899999998299989922342177647750336999999998438--99899999985697313
Q ss_pred CCCCC
Q ss_conf 01019
Q gi|254780489|r 321 GIYCL 325 (325)
Q Consensus 321 ga~lL 325 (325)
-+++|
T Consensus 302 ~~~~~ 306 (346)
T PRK04262 302 DAFSI 306 (346)
T ss_pred EEEEE
T ss_conf 68999
No 15
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00 E-value=0 Score=453.16 Aligned_cols=317 Identities=26% Similarity=0.334 Sum_probs=272.5
Q ss_pred CEEEEEEEEECCCCCCCHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
Q ss_conf 20999999735886138889998809997683111475088994898879999999999986430132223442588431
Q gi|254780489|r 5 SSCILGFGHAVPNQCIHNSIIERHLNLKLGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTLLATS 84 (325)
Q Consensus 5 ~~~I~g~g~~lP~~~i~n~~l~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~ 84 (325)
+++|.|+|+|+|+++|+|+|+++.++.+ ++.+++||++||++.++|++.+|+++|+|+||++++++|+|||+||++|+
T Consensus 1 ~v~I~~~g~y~P~~~v~~~~~~~~~~~~--~~~~~~Gi~~r~~a~~~e~~~~ma~~Aa~~aL~~a~~~~~~Idlli~~s~ 78 (324)
T cd00827 1 DVGIEAIGAYLPRYRVDNEELAEGLGVD--PGKYTTGIGQRHMAGDDEDVPTMAVEAARRALERAGIDPDDIGLLIVATE 78 (324)
T ss_pred CCCEEEEEEECCCCEECHHHHHHHHCCH--HHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECC
T ss_conf 9368799997899479599999884952--76502470389967999999999999999999984989889979999325
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCEEEEEEECCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 002368874322112100238633342101231012567657887438-8505886201224444622244343254420
Q gi|254780489|r 85 TPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYINSH-QKPVLIIAANLLSRRINLEDKDTAIIFGDAA 163 (325)
Q Consensus 85 t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~g-~~~vLVv~~e~~S~~~d~~d~~~~~lfGDgA 163 (325)
+|++..|++|++||++||++++.+||++++|+|+++||++|.+++++| .+++|||++|++|+.+++.++ ..++|||||
T Consensus 79 ~~~~~~p~~a~~i~~~Lgl~~~~~~di~~~C~g~~~aL~~A~~~l~~g~~~~~LVv~~e~~s~~~~~~~~-~~~~~GDgA 157 (324)
T cd00827 79 SPIDKGKSAATYLAELLGLTNAEAFDLKQACYGGTAALQLAANLVESGPWRYALVVASDIASYLLDEGSA-LEPTLGDGA 157 (324)
T ss_pred CCCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHCCCCCCCCC-CCCCCCCCC
T ss_conf 7786797499999998589997188601422047999999998875487651478740110124677987-664457722
Q ss_pred EEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCC-CCCCCHHHHHHHCCCHHHHHHHHHHHHC
Q ss_conf 011220576544453113553213677652783069866765445565523-2245145434320100367898899740
Q gi|254780489|r 164 GAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYM-RITNGADIFYNAVKIMAQSAKQSLRKSD 242 (325)
Q Consensus 164 ~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~v~~~~~~~~~~~i~~~l~~~g 242 (325)
+|+||++++.....+++.....+++..+.......++...+.........+ ....+..+++...+.+++.++++|++.+
T Consensus 158 aA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 237 (324)
T cd00827 158 AAMLVSRNPGILAAGIVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKALDRAG 237 (324)
T ss_pred EEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 89998227865555403677501566544444567888777543210022224441789999999999999999999849
Q ss_pred CCCCCCCEEEECCCCC-HHHHHHHHHCCCCHHHH----HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCC
Q ss_conf 1200122463056541-38999999719786570----021854093300059999999998067899989999986155
Q gi|254780489|r 243 LQPQDINRFIPHQANS-RIIQKVCEKIGLSKRIM----VNSLKDFGNSSSASIPLSLSLENQRKPFQKGEKILTISCRRG 317 (325)
Q Consensus 243 l~~~did~~i~Hq~~~-~~~~~~~~~lgi~~~~~----~~~l~~~GN~~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~G 317 (325)
++ +|+++|++||+|. ++++.++++|+++.++. +.++++||||++||+|++|+++++++++++||+|+++++|+|
T Consensus 238 ~~-~~~~~~~~hq~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sasi~~~L~~~l~~g~l~~Gd~vll~~~G~G 316 (324)
T cd00827 238 LS-EDIDYFVPHQPNGKKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGLASLLESGKLKAGDRVLLFSYGSG 316 (324)
T ss_pred CC-HHHHHEEECCCCHHHHHHHHHHHCCCCHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHH
T ss_conf 97-54412432576378999999998399656513516465168414489899999999997299998499999999068
Q ss_pred CCCCCCCC
Q ss_conf 10201019
Q gi|254780489|r 318 NDRGIYCL 325 (325)
Q Consensus 318 ~s~ga~lL 325 (325)
++||+++|
T Consensus 317 ~s~~~~vl 324 (324)
T cd00827 317 FTAEAFVL 324 (324)
T ss_pred HHHHHECC
T ss_conf 31551119
No 16
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=0 Score=445.44 Aligned_cols=314 Identities=22% Similarity=0.269 Sum_probs=257.4
Q ss_pred CEEEEEEEEECCCCCCCHHHHHHHHCC------------CHHHEEECCCCCEEEEECCC---------------------
Q ss_conf 209999997358861388899988099------------97683111475088994898---------------------
Q gi|254780489|r 5 SSCILGFGHAVPNQCIHNSIIERHLNL------------KLGVIEQKTGIKYRYWAEKH--------------------- 51 (325)
Q Consensus 5 ~~~I~g~g~~lP~~~i~n~~l~~~~~~------------~~~~i~~~tGI~~R~~~~~~--------------------- 51 (325)
.++|+|+|+|+|+++++|+++.+.+.. ...||.+++||++||++.++
T Consensus 1 ~A~I~gigt~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tgI~~R~~~~~~~~~~~~~~~~~~~~~~~r~~~ 80 (361)
T cd00831 1 AATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERNDI 80 (361)
T ss_pred CEEEEEEEEECCCEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHCCCCCCCCCCHHHHHHH
T ss_conf 91999988777992675999999998744333435678999999972698615555266122024565558887888777
Q ss_pred --CCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC-CCCCCCCC-CCCCCCHHHHHHHHH
Q ss_conf --87999999999998643013222344258843100236887432211210023-86333421-012310125676578
Q gi|254780489|r 52 --ETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLM-QSGAIDLT-GACAGFLYALVMADS 127 (325)
Q Consensus 52 --e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~-~~~~~di~-~~C~g~l~aL~~A~~ 127 (325)
|...+|+++|+++||+++|++|+|||+||++|+| ++..|+++++|+++||++ ++..||++ +||+||++||++|.+
T Consensus 81 ~~~~~~~la~~Aa~~AL~~ag~~~~dId~lI~~Tst-~~~~Ps~a~~v~~~LGl~~~~~~~dl~~~gCsg~~~aL~~A~~ 159 (361)
T cd00831 81 ALEEARELAEEAARGALDEAGLRPSDIDHLVVNTST-GNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKD 159 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCC-CCCCCCHHHHHHHHHCCCCCHHEEECCCCCCHHHHHHHHHHHH
T ss_conf 998999999999999999819898999999998659-9998976999999738998700355646755689999999999
Q ss_pred HHHCC-CCEEEEEEECCCCCCCCCCCCC----CCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCC
Q ss_conf 87438-8505886201224444622244----343254420011220576544453113553213677652783069866
Q gi|254780489|r 128 YINSH-QKPVLIIAANLLSRRINLEDKD----TAIIFGDAAGAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGST 202 (325)
Q Consensus 128 ~i~~g-~~~vLVv~~e~~S~~~d~~d~~----~~~lfGDgA~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~ 202 (325)
++++| .+++|||++|.+|+++++.|+. +..+|||||+|+||+..+.......... ..... ....+|.....
T Consensus 160 ~i~~g~~~~vLVV~~E~~S~~~~~~d~~~~~v~~~LFGDGA~A~vl~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~ 235 (361)
T cd00831 160 LLEANPGARVLVVSTELCSLWYRGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLF--ELVRA--ASTLLPDSEDA 235 (361)
T ss_pred HHHHCCCCEEEEEEEEECCEECCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEE--EECCC--CCCCCCCCCCC
T ss_conf 998299976999961211202068875777554200047725899842676665666526--88377--76124688876
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHH--CCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHH---H
Q ss_conf 765445565523224514543432010036789889974--01200122463056541389999997197865700---2
Q gi|254780489|r 203 SPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKS--DLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMV---N 277 (325)
Q Consensus 203 ~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~--gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~---~ 277 (325)
.... ..+..+.+..++++++...+.+++.+++++++. ++...|||+|++||+|+++++.++++||+|++|+. .
T Consensus 236 ~~~~--~~~~g~~~~l~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~di~~~~~Hq~~~~Ii~~v~~~Lgl~~~~~~~s~~ 313 (361)
T cd00831 236 MGWH--LGEEGLTFVLSRDVPRLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPGGRAVLDAVEKALGLSPEDLEASRM 313 (361)
T ss_pred CCCC--CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 6665--05775378506369999999999999999998258999677255887878689999999982989688325787
Q ss_pred HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCC
Q ss_conf 185409330005999999999806789998999998615510201019
Q gi|254780489|r 278 SLKDFGNSSSASIPLSLSLENQRKPFQKGEKILTISCRRGNDRGIYCL 325 (325)
Q Consensus 278 ~l~~~GN~~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~G~s~ga~lL 325 (325)
++.+||||+|||||++|+++++++++++||+|++++||+|+|||++++
T Consensus 314 ~l~~~GNtsSaSip~~L~~~~~~~~~~~Gd~vl~~afG~Glt~~~~v~ 361 (361)
T cd00831 314 VLRRYGNMSSSSVLYVLAYMEAKGRVKRGDRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHEEEEECC
T ss_conf 898638539889999999999739999999899999810405531209
No 17
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=100.00 E-value=2.1e-42 Score=297.04 Aligned_cols=300 Identities=21% Similarity=0.254 Sum_probs=242.8
Q ss_pred CCEEEEEEEEECCCCCCCHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
Q ss_conf 62099999973588613888999880999768311147508899489887999999999998643013222344258843
Q gi|254780489|r 4 SSSCILGFGHAVPNQCIHNSIIERHLNLKLGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTLLAT 83 (325)
Q Consensus 4 ~~~~I~g~g~~lP~~~i~n~~l~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s 83 (325)
+.+.|.++|.|+|.++|+.+|+++..+..++++.+-+|+++|.+.+++|+..+||++|+|++|.++++||++|++|+++|
T Consensus 1 ~~iGI~~~g~y~p~~~i~~~ela~~~g~d~~k~~~gl~~~e~sv~~~~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~vgT 80 (377)
T COG3425 1 MMIGIVGIGAYIPRYRIKLEELARAWGVDPEKIKKGLGVEEKSVPPWDEDAVTMAVEAARNALKRADIDPSKIGAVIVGS 80 (377)
T ss_pred CCCCCCEEEEECCCEEEEHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEC
T ss_conf 95551238885662386099997632888377653004234467997420899999999998751388988966699953
Q ss_pred EEECCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHCCC-CEEEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 100236887432211210023-86333421012310125676578874388-5058862012244446222443432544
Q gi|254780489|r 84 STPDHLLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADSYINSHQ-KPVLIIAANLLSRRINLEDKDTAIIFGD 161 (325)
Q Consensus 84 ~t~d~~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~~i~~g~-~~vLVv~~e~~S~~~d~~d~~~~~lfGD 161 (325)
.++.+...+++.+|++.||+. ++.++|+..+|.+++.||+.|.+++.++. +++|||++|+.-. .+.+. --.+.|+
T Consensus 81 ES~~d~~K~~at~v~~~lg~~~~~~~~d~~~AC~agT~aL~~a~~~v~s~~~~~~LvI~sD~a~~--~~~~~-~E~t~GA 157 (377)
T COG3425 81 ESGPDAVKPTATIVAEALGLNPSARAADVEFACYAGTAALQAAIGWVESGMISYGLVIGADTAQY--APGDA-LEYTAGA 157 (377)
T ss_pred CCCCCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCC--CCCCC-CCCCCCC
T ss_conf 77765444058999998389975120567878998899999999999728755417996311035--88865-6766778
Q ss_pred CEEEEEECCCCCCCCCCCEEEEEEECCC-CCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 2001122057654445311355321367-765278306986676544556552322451454343201003678988997
Q gi|254780489|r 162 AAGAVVLAPSPLKDKSGILGIELTSDGS-KYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRK 240 (325)
Q Consensus 162 gA~A~il~~~~~~~~~~il~~~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~ 240 (325)
||+|+|+++.+.. -.......+..+ ..|+ ..|.+.... ..+|+.-.+...+.+..+.++++++
T Consensus 158 GavA~lIg~n~~~---~a~~~~~~syt~d~~DF--------wRp~~~~yp-----~~dg~~s~~~Y~~~~~~a~~~~~~k 221 (377)
T COG3425 158 GAVAFLIGKNPPI---VAEFEGTGSYTTDTPDF--------WRPDGQPYP-----YVDGRFSEPAYFKHVENAAKGYMEK 221 (377)
T ss_pred CEEEEEEECCCCE---EEEECCCEEEECCCCCC--------CCCCCCCCC-----CCCCEECHHHHHHHHHHHHHHHHHH
T ss_conf 6089998069872---78724756774577761--------466898466-----4076355899999999999999998
Q ss_pred HCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHH---HHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCC
Q ss_conf 40120012246305654138999999719786570021---854093300059999999998067899989999986155
Q gi|254780489|r 241 SDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNS---LKDFGNSSSASIPLSLSLENQRKPFQKGEKILTISCRRG 317 (325)
Q Consensus 241 ~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~---l~~~GN~~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~G 317 (325)
.|++++|+|++++||++.+|-...++.++++++++-.. .++.||+.++|+++.|..+++... ++||+|+++++|+|
T Consensus 222 ~gls~~dfdy~vfH~P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~Ld~a~-~~G~rIl~~SYGSG 300 (377)
T COG3425 222 TGLSPDDFDYIVFHQPNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK-LPGDRILLFSYGSG 300 (377)
T ss_pred HCCCHHHHCEEEECCCCCCHHHHHHHHHCCCHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCC-CCCCEEEEEEECCC
T ss_conf 38984550759831798724899999857347662843011665275111069999999985267-88887999960788
Q ss_pred CCCCCC
Q ss_conf 102010
Q gi|254780489|r 318 NDRGIY 323 (325)
Q Consensus 318 ~s~ga~ 323 (325)
...-++
T Consensus 301 a~s~~f 306 (377)
T COG3425 301 AGSEAF 306 (377)
T ss_pred CCEEEE
T ss_conf 525678
No 18
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.7e-41 Score=288.20 Aligned_cols=311 Identities=22% Similarity=0.243 Sum_probs=241.8
Q ss_pred EEEEEEEEECCCCCCCHHHHHHHH----CC-CHHHE----EECCCCCEEEEECCC-----------------CCHHHHHH
Q ss_conf 099999973588613888999880----99-97683----111475088994898-----------------87999999
Q gi|254780489|r 6 SCILGFGHAVPNQCIHNSIIERHL----NL-KLGVI----EQKTGIKYRYWAEKH-----------------ETLTDIAI 59 (325)
Q Consensus 6 ~~I~g~g~~lP~~~i~n~~l~~~~----~~-~~~~i----~~~tGI~~R~~~~~~-----------------e~~~~la~ 59 (325)
++|.|+++++|++.+.+.|+...+ .. ..+.| ....+|++||.+.|. |.+..+++
T Consensus 2 a~i~sv~t~~Ppy~~~Qse~~d~f~~~~~~~~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a~~l~v 81 (356)
T COG3424 2 AVIASVATALPPYRYNQSEITDSFAELPFQEGREDIPRVLHANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEAVPLGV 81 (356)
T ss_pred CEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEECCCHHHCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 25400005799643566788999987315222678899986533625121226276641788756630349998799999
Q ss_pred HHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC-CCCCCC-CCCCCCCHHHHHHHHHHHHCC-CCEE
Q ss_conf 9999986430132223442588431002368874322112100238-633342-101231012567657887438-8505
Q gi|254780489|r 60 QAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLMQ-SGAIDL-TGACAGFLYALVMADSYINSH-QKPV 136 (325)
Q Consensus 60 ~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~~-~~~~di-~~~C~g~l~aL~~A~~~i~~g-~~~v 136 (325)
+|.|+||+.+++.|+|||+|+++|+|+ ...|+..++|.++||++. +.-+-+ -.||.++..+|..|.+|++++ ..++
T Consensus 82 ~a~r~aL~~~~l~pedId~vv~vtsTG-~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~~~v 160 (356)
T COG3424 82 DALRRALDGSPLRPEDIDAVVTVTSTG-LATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPDANV 160 (356)
T ss_pred HHHHHHHCCCCCCHHHCCEEEEEEECC-CCCCCHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 999988526999977886799995025-5478754998861399976405220032014211578999999750866508
Q ss_pred EEEEECCCCCCCCCCCCCC-----CCCCCCCEEEEEECCCCCCCCCCCEEEE-EEECCCCCCEEEEECCCCCCCCCCCCC
Q ss_conf 8862012244446222443-----4325442001122057654445311355-321367765278306986676544556
Q gi|254780489|r 137 LIIAANLLSRRINLEDKDT-----AIIFGDAAGAVVLAPSPLKDKSGILGIE-LTSDGSKYDLIKIPTGGSTSPAGTNTH 210 (325)
Q Consensus 137 LVv~~e~~S~~~d~~d~~~-----~~lfGDgA~A~il~~~~~~~~~~il~~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~ 210 (325)
||||.|.||-.+...|+.. .-+||||++|+|++.+...++...+... +.+.+. ....+.+.-+.+..
T Consensus 161 lvV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~St-------L~~dse~~Mgwdv~ 233 (356)
T COG3424 161 LVVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFST-------LYPDSEDIMGWDVG 233 (356)
T ss_pred EEEEEEEEEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCEECCCCCC-------CCCCCCCCCCEEEC
T ss_conf 99994632155434788754513333004870589983464334667897500045454-------68862100115304
Q ss_pred CCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHH---HHHHHHHCCCCCC
Q ss_conf 5523224514543432010036789889974012001224630565413899999971978657---0021854093300
Q gi|254780489|r 211 DFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRI---MVNSLKDFGNSSS 287 (325)
Q Consensus 211 ~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~---~~~~l~~~GN~~s 287 (325)
+..+...-.+++....-+++...+..+|..++++.+||+.|+.|+++++++++..+.||+++++ .+..|.+|||++|
T Consensus 234 d~G~~~vlSrdlp~lIe~~l~~~V~~fL~~~~ls~~dI~~w~~HPGG~KVida~~~sLgls~e~l~~s~~~L~~~GNMSS 313 (356)
T COG3424 234 DQGLKVVLSRDLPNLIESYLAPNVTTFLATHGLSIEDIEAWVVHPGGPKVIDAYEESLGLSPEALELSWDVLREYGNMSS 313 (356)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 88479997573268999985255899999768766541115557997069999987618998899999999998278652
Q ss_pred CHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCC
Q ss_conf 05999999999806789998999998615510201019
Q gi|254780489|r 288 ASIPLSLSLENQRKPFQKGEKILTISCRRGNDRGIYCL 325 (325)
Q Consensus 288 Asi~~~L~~~~~~g~i~~Gd~vll~~~G~G~s~ga~lL 325 (325)
|++++.|.+.+++. -++|++.++.++|+||+...+||
T Consensus 314 atvLfVL~d~l~~~-~~~g~~Gl~~A~GPGf~sElvL~ 350 (356)
T COG3424 314 ATVLFVLEDTLQKA-PKSGSRGLMFAMGPGFCSELVLL 350 (356)
T ss_pred HHHHHHHHHHHHHC-CCCCCCEEEEECCCCCEEEEEEE
T ss_conf 10299999999736-88776303453278632224457
No 19
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=100.00 E-value=5.7e-39 Score=274.59 Aligned_cols=239 Identities=20% Similarity=0.219 Sum_probs=194.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 89887999999999998643013222344258843100236887432211210023863334210123101256765788
Q gi|254780489|r 49 EKHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSY 128 (325)
Q Consensus 49 ~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~ 128 (325)
.++++.++|+++|+++||++||++++|||.||++|++||+..|+.+++|+.+||+++.++|||+.+|+|+++||.+|.++
T Consensus 2 ~~g~~~s~la~~Aa~~Al~dAGi~~~~i~~viv~t~t~~~~~p~~a~~v~~~lgl~~~p~~~v~~aCss~~~Al~~A~~~ 81 (254)
T cd00327 2 GLGITASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGISGGPAYSVNQACATGLTALALAVQQ 81 (254)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHH
T ss_conf 98844999999999999998299854688999999787502247999999982999988066120243777999999999
Q ss_pred HHCC-CCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC-EEEEEEECCCCCCEEEEECCCCCCCCC
Q ss_conf 7438-85058862012244446222443432544200112205765444531-135532136776527830698667654
Q gi|254780489|r 129 INSH-QKPVLIIAANLLSRRINLEDKDTAIIFGDAAGAVVLAPSPLKDKSGI-LGIELTSDGSKYDLIKIPTGGSTSPAG 206 (325)
Q Consensus 129 i~~g-~~~vLVv~~e~~S~~~d~~d~~~~~lfGDgA~A~il~~~~~~~~~~i-l~~~~~s~~~~~~~~~~~~~~~~~~~~ 206 (325)
|++| .+++||+++|. ++|||||+|++|++.+...+.+. ....+ ...+.... +
T Consensus 82 i~~G~~~~vlv~g~e~-------------~~~gdGAga~vl~~~~~a~~~~~~~~~~i------------~~~~~~~~-g 135 (254)
T cd00327 82 VQNGKADIVLAGGSEE-------------FVFGDGAAAAVVESEEHALRRGAHPQAEI------------VSTAATFD-G 135 (254)
T ss_pred HHHCCCCEEEECCCEE-------------EEECCCCEEEEECCHHHHHCCCCCEEEEE------------ECCCCCCC-C
T ss_conf 9958999899738768-------------87067608887302456653898514778------------51312346-9
Q ss_pred CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHH-----HHHHHHH
Q ss_conf 45565523224514543432010036789889974012001224630565413899999971978657-----0021854
Q gi|254780489|r 207 TNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRI-----MVNSLKD 281 (325)
Q Consensus 207 ~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~-----~~~~l~~ 281 (325)
...++....+.+.++++++|+++|++++||||+.+||.|.++.+.+.+++.++.++ +..+..+
T Consensus 136 ------------~~~~~~p~~~~~~~~i~~al~~agl~~~dId~v~~H~tgt~i~D~iE~~a~~~~~~~~~~~i~s~k~~ 203 (254)
T cd00327 136 ------------ASMVPAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIM 203 (254)
T ss_pred ------------CCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf ------------98662788789999999999983998645257997888783545999986534006998870674014
Q ss_pred CCCCCCCHHHHHHHHHH---HHCCCC----CCCEEEEEEECCCCCCCCCCC
Q ss_conf 09330005999999999---806789----998999998615510201019
Q gi|254780489|r 282 FGNSSSASIPLSLSLEN---QRKPFQ----KGEKILTISCRRGNDRGIYCL 325 (325)
Q Consensus 282 ~GN~~sAsi~~~L~~~~---~~g~i~----~Gd~vll~~~G~G~s~ga~lL 325 (325)
||||.+|+.++.|.+.+ +.+.++ +++++++.+||.|.+|++++|
T Consensus 204 ~GH~~~Asg~~~l~~~~l~l~~~~ippt~~~~~~~~~~~fG~Ggt~~~~vl 254 (254)
T cd00327 204 TGHPLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEEEEC
T ss_conf 154299999999999999985598697899999999957564711057869
No 20
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative; InterPro: IPR004656 This family of archaeal proteins shows considerable homology and identical active site residues to FabH, the beta-ketoacyl-acyl carrier protein synthase III of bacteria and plants. The archaeal species in which it is found, however, do not have a readily detectable homolog of acyl carrier protein itself, suggesting the condensation of the acyl group with some other carrier. In Methanococcus jannaschii, Q58941 from SWISSPROT, Cys-112 is the site of acyl group attachment and His-234 and Asn-237 are also active site residues by homology to FabH. Closely related bacterial families include a polyketide antibiotic (2,4-diacetylphloroglucinol) biosynthesis protein from Pseudomonas fluorescens and an uncharacterised protein from Staphylococcus carnosus. .
Probab=99.98 E-value=3.5e-32 Score=230.22 Aligned_cols=300 Identities=21% Similarity=0.249 Sum_probs=238.4
Q ss_pred EEEEEEEEECCCCCCCHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEE
Q ss_conf 09999997358861388899988099976831114750889948988799999999999864301322234425884310
Q gi|254780489|r 6 SCILGFGHAVPNQCIHNSIIERHLNLKLGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTLLATST 85 (325)
Q Consensus 6 ~~I~g~g~~lP~~~i~n~~l~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t 85 (325)
+.|+|.|.|+|.++|.++|+.+.|+..++.|.+..-|+++.+...||++.+++++|+|+||+++.+||.||..|.++|.+
T Consensus 2 ~GivGyG~y~P~yri~~eei~rvW~~dp~~i~~g~~~~ek~vP~~ded~~ti~~eaarnal~r~~idP~~i~a~~~Gses 81 (347)
T TIGR00748 2 AGIVGYGAYIPKYRIKVEEIARVWGDDPEAISKGLLVEEKAVPGLDEDTATIAVEAARNALKRAKIDPKDIGAVYVGSES 81 (347)
T ss_pred CCEEEECCCCCCEEECHHHHHHHHCCCHHHHHCCEEEEECCCCCCCCCCEEEHHHHHHHHHHHCCCCHHHCCEEEECCCC
T ss_conf 41576210115311102344433056636865570255324788663400111467787776304784164177960568
Q ss_pred ECCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCEEEEEEECCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 0236887432211210023-8633342101231012567657887438-8505886201224444622244343254420
Q gi|254780489|r 86 PDHLLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADSYINSH-QKPVLIIAANLLSRRINLEDKDTAIIFGDAA 163 (325)
Q Consensus 86 ~d~~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~~i~~g-~~~vLVv~~e~~S~~~d~~d~~~~~lfGDgA 163 (325)
.+|...+++..|++.+++. +..+-|+..+|..+..+|+.+..++.+| .|+.|-|++|+.. -.|.|... ++-+-|+
T Consensus 82 ~PyavkP~~t~~aea~~atP~l~aad~efaCkaGt~~~q~~~G~v~sG~~ky~la~Gadtaq--G~PGd~le-~ta~aGG 158 (347)
T TIGR00748 82 KPYAVKPTATIVAEAIEATPDLTAADLEFACKAGTAGIQACIGLVESGLIKYGLAIGADTAQ--GAPGDALE-YTAAAGG 158 (347)
T ss_pred CCCEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC--CCCCCCCE-ECCCCCC
T ss_conf 65100640355544540575740221355555216889988756764466655431241026--89863100-0003785
Q ss_pred EEEEECCCCCCCCCCCEEE-EEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHC
Q ss_conf 0112205765444531135-532136776527830698667654455655232245145434320100367898899740
Q gi|254780489|r 164 GAVVLAPSPLKDKSGILGI-ELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSD 242 (325)
Q Consensus 164 ~A~il~~~~~~~~~~il~~-~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~g 242 (325)
+|.+++.....--..+-.+ .+.||. .|+++ + .+..-.+..-+++..+.-|++. ....+.++++.|
T Consensus 159 aa~~iG~~~~~~~a~~~~~ysy~tdt--Pdf~r------r--~~~~yPrhG~rftGePayf~hv----~~aa~~lm~~~G 224 (347)
T TIGR00748 159 AAYIIGEKNSEVVAEFEGTYSYTTDT--PDFWR------R--EGKPYPRHGGRFTGEPAYFKHV----VTAAKGLMEKLG 224 (347)
T ss_pred EEEEECCCCHHHHHHHHCCEEEEECC--CHHHH------H--CCCCCCCCCCCCCCCHHHHHHH----HHHHHHHHHHHC
T ss_conf 26886075122343110332242068--15664------0--6787887787546763789999----999999999727
Q ss_pred CCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHH-H-HHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC
Q ss_conf 120012246305654138999999719786570021-8-54093300059999999998067899989999986155102
Q gi|254780489|r 243 LQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNS-L-KDFGNSSSASIPLSLSLENQRKPFQKGEKILTISCRRGNDR 320 (325)
Q Consensus 243 l~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~-l-~~~GN~~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~G~s~ 320 (325)
++++|+||.++||+|.++.-..++.||++.|+...- | ...|||.|...++.|...++. .++|++||.+++|+|..+
T Consensus 225 ~~~~d~dy~vfhqPn~kf~~~~a~~lG~~~e~~~~Gll~~~iGntysGa~~~G~~~~ld~--~~~G~ril~vs~GsGaGs 302 (347)
T TIGR00748 225 LKPEDFDYAVFHQPNGKFYLKAARILGFKKEQVKPGLLTPVIGNTYSGATPVGLSAVLDV--AEPGERILAVSYGSGAGS 302 (347)
T ss_pred CCCCCCCEEEEECCCCCEEEEEHHHHCCCHHCEECCCCCCCCCCCCCCHHHHHHHHHHHC--CCCCCEEEEEEECCCCCC
T ss_conf 882314147875587504441123407510100001012333543233145546777530--478864899960677675
Q ss_pred CCCC
Q ss_conf 0101
Q gi|254780489|r 321 GIYC 324 (325)
Q Consensus 321 ga~l 324 (325)
.++.
T Consensus 303 daf~ 306 (347)
T TIGR00748 303 DAFS 306 (347)
T ss_pred CEEE
T ss_conf 3367
No 21
>TIGR01835 HMG-CoA-S_prok hydroxymethylglutaryl-CoA synthase; InterPro: IPR011554 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA . HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria . In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi . In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes , . This entry represents HMG-CoA synthase enzymes found in a limited spectrum of mostly Gram-positive bacteria, which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway..
Probab=99.96 E-value=5.2e-30 Score=216.00 Aligned_cols=297 Identities=18% Similarity=0.193 Sum_probs=229.6
Q ss_pred EEEEEEEECCCCCCCHHHHHH-----HHCCCHHHEEECCC---CCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCE
Q ss_conf 999999735886138889998-----80999768311147---5088994898879999999999986430132223442
Q gi|254780489|r 7 CILGFGHAVPNQCIHNSIIER-----HLNLKLGVIEQKTG---IKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISL 78 (325)
Q Consensus 7 ~I~g~g~~lP~~~i~n~~l~~-----~~~~~~~~i~~~tG---I~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ 78 (325)
.|-.++.|+|.+.++=++|++ .-|..++|+.+.+| -++=.+.+.+|+..+||..|++.=|++.+++.++||+
T Consensus 2 GI~~I~F~~p~~yl~~~~LAEnPLYF~~gv~p~K~~~GIgatLQ~~~~~~~~~eDiVTmAA~Aa~~Il~~~nLd~~~Id~ 81 (412)
T TIGR01835 2 GIDKISFFTPQYYLDLTALAENPLYFARGVDPEKFSKGIGATLQKKMAVPPIDEDIVTMAASAAKPILDRNNLDKQKIDM 81 (412)
T ss_pred CCCHHHHHCCCCCCCHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCE
T ss_conf 70112344030003535663041145417664357577436777650689788645788999999743242068442347
Q ss_pred EEEEEEEECCCCCCCCCCCCCCCCCC-CCC-----CCCCCCCCCCCHHHHHHHHHHHHCC-C-CEEEEEEECCCCCCCCC
Q ss_conf 58843100236887432211210023-863-----3342101231012567657887438-8-50588620122444462
Q gi|254780489|r 79 TLLATSTPDHLLPPSSPLITHRLGLM-QSG-----AIDLTGACAGFLYALVMADSYINSH-Q-KPVLIIAANLLSRRINL 150 (325)
Q Consensus 79 ii~~s~t~d~~~P~~a~~v~~~Lg~~-~~~-----~~di~~~C~g~l~aL~~A~~~i~~g-~-~~vLVv~~e~~S~~~d~ 150 (325)
||++|.|.-....+.|..|+..||+. .|. +|+|..||.|.+.||+.|...++-. . ++||||++|+.--.++-
T Consensus 82 Vi~gTESgID~SKAaavyvh~LLgl~p~cRGnnFL~~ElK~ACYGATAaLq~A~~hv~~~P~s~kVLViaSDiAkY~~~t 161 (412)
T TIGR01835 82 VIFGTESGIDQSKAAAVYVHGLLGLQPFCRGNNFLSFELKQACYGATAALQMAKGHVARSPNSRKVLVIASDIAKYGLET 161 (412)
T ss_pred EEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCC
T ss_conf 89751052668999999999982778431045422432777779999999999999851888660168886311227798
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCH
Q ss_conf 22443432544200112205765444531135532136776527830698667654455655232245145434320100
Q gi|254780489|r 151 EDKDTAIIFGDAAGAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIM 230 (325)
Q Consensus 151 ~d~~~~~lfGDgA~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~ 230 (325)
.-.. +=|-||+|+||+.+|. ++.....+-| .++-+-....+|..... -+.+|+.=-+..+..+
T Consensus 162 ~GE~---TQGAGAVA~Li~~dP~-----~l~i~~~~~G----~~T~DimDFWRP~y~~~-----a~VdG~~S~~~Yl~a~ 224 (412)
T TIGR01835 162 PGEA---TQGAGAVAMLISADPK-----LLAINEDSVG----LYTDDIMDFWRPNYSTT-----ALVDGQYSTEQYLNAL 224 (412)
T ss_pred CCCC---CHHHHHHHHHHHCCCH-----HHHCCCCCCC----EECCCCCCCCCCCCCCC-----CEECCCHHHHHHHHHH
T ss_conf 9886---1668999998741801-----2001587653----12133121217898855-----3164604688999999
Q ss_pred HHHHHHHHHHHCCCCCCCCE---EEECCCCCHHHH-HHHHHC---CCCHH--HH-------HHHHH------HCCCCCCC
Q ss_conf 36789889974012001224---630565413899-999971---97865--70-------02185------40933000
Q gi|254780489|r 231 AQSAKQSLRKSDLQPQDINR---FIPHQANSRIIQ-KVCEKI---GLSKR--IM-------VNSLK------DFGNSSSA 288 (325)
Q Consensus 231 ~~~i~~~l~~~gl~~~did~---~i~Hq~~~~~~~-~~~~~l---gi~~~--~~-------~~~l~------~~GN~~sA 288 (325)
.++.++.-++.|++.+|++. |++|+|-.||-. ++...| .-+.+ ++ +.=-+ +.||+.++
T Consensus 225 ~~aW~dy~~~~~~~l~DfaanYR~~fH~PftKMg~Ka~~~~l~~~~~~~~k~~~~~~y~~Si~Y~~Gveaam~vGN~YTG 304 (412)
T TIGR01835 225 EEAWNDYKERTGLSLEDFAANYRFCFHVPFTKMGLKALRHILKKNKEDEDKDSVQKAYEESILYNRGVEAAMEVGNLYTG 304 (412)
T ss_pred HHHHHHHHHHCCCCHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 99999999723897567531571787078742037999998740478126899999875336785234433330541378
Q ss_pred HHHHHHHHHHHHC---CCCCCCEEEEEEECCCCCC
Q ss_conf 5999999999806---7899989999986155102
Q gi|254780489|r 289 SIPLSLSLENQRK---PFQKGEKILTISCRRGNDR 320 (325)
Q Consensus 289 si~~~L~~~~~~g---~i~~Gd~vll~~~G~G~s~ 320 (325)
|++++|.-++|+- .+..|++|.|+|.|||-..
T Consensus 305 SlyLgL~sLLena~sk~d~tG~~Igl~SYGSGava 339 (412)
T TIGR01835 305 SLYLGLASLLENAQSKEDLTGDKIGLFSYGSGAVA 339 (412)
T ss_pred HHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEE
T ss_conf 89999999863036644313111110012522011
No 22
>pfam00195 Chal_sti_synt_N Chalcone and stilbene synthases, N-terminal domain. The C-terminal domain of Chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in this N-terminal domain.
Probab=99.95 E-value=2e-27 Score=199.08 Aligned_cols=166 Identities=22% Similarity=0.321 Sum_probs=135.9
Q ss_pred EEEEEEEEECCCCCCCHHHHHHHH----CC---C-----HHHEEECCCCCEEEEECCCC---------------------
Q ss_conf 099999973588613888999880----99---9-----76831114750889948988---------------------
Q gi|254780489|r 6 SCILGFGHAVPNQCIHNSIIERHL----NL---K-----LGVIEQKTGIKYRYWAEKHE--------------------- 52 (325)
Q Consensus 6 ~~I~g~g~~lP~~~i~n~~l~~~~----~~---~-----~~~i~~~tGI~~R~~~~~~e--------------------- 52 (325)
++|.|+|+.+|++.++++++.+.+ +. . ..+|.+++||++||..-++|
T Consensus 17 A~Il~IgTA~Pp~~~~Q~~~~d~~~~~~~~~~~~~~k~~l~ri~~~sgI~~R~~vl~~e~~~~~P~~~~~~~ps~~~R~~ 96 (228)
T pfam00195 17 ATILAIGTATPSNCVDQSTYPDYYFRVTKSEHLTDLKEKFQRICEKSTIKKRYMVLTEEILKENPELCTEMAPSLDARQD 96 (228)
T ss_pred EEEEEEEEECCCCEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCCCCCCHHHHHH
T ss_conf 69999997189955248999999999734432426789999899846988315861768761495510256999899999
Q ss_pred ----CHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC-CCCCCCC-CCCCCCHHHHHHHH
Q ss_conf ----79999999999986430132223442588431002368874322112100238-6333421-01231012567657
Q gi|254780489|r 53 ----TLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLMQ-SGAIDLT-GACAGFLYALVMAD 126 (325)
Q Consensus 53 ----~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~~-~~~~di~-~~C~g~l~aL~~A~ 126 (325)
...+|+.+|+++||+++|++++|||+||++|+|. +..|+...++.++||+++ +.-+.|. +||+|++.+|.+|.
T Consensus 97 ~~~~~a~~La~~Aa~~AL~~aG~~~~dIthlv~vt~TG-~~~Pg~d~~l~~~LGL~~~v~R~~i~~~GC~gg~~gL~~A~ 175 (228)
T pfam00195 97 IAVVEVPKLGKEAALKAIKEWGQPKSKITHLVFCTTSG-VDMPGADYQLTKLLGLRPSVKRVMLYQQGCFAGGTVLRLAK 175 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCC-CCCCCHHHHHHHHCCCCCCCHHEEEECCCCHHHHHHHHHHH
T ss_conf 99999999999999999999588988999999994799-98874789999982989872111411454164899999999
Q ss_pred HHHHCC-CCEEEEEEECCCCCCCCC-CC--C---CCCCCCCCCEEEEEECCCC
Q ss_conf 887438-850588620122444462-22--4---4343254420011220576
Q gi|254780489|r 127 SYINSH-QKPVLIIAANLLSRRINL-ED--K---DTAIIFGDAAGAVVLAPSP 172 (325)
Q Consensus 127 ~~i~~g-~~~vLVv~~e~~S~~~d~-~d--~---~~~~lfGDgA~A~il~~~~ 172 (325)
++++++ ..+|||||+|.+|-.++. .+ . ....||||||+|+||+.+|
T Consensus 176 ~~~~~~p~~~VLvv~~Elcsl~f~~~~~~~~~~lV~~aLFgDGAaAvvv~adP 228 (228)
T pfam00195 176 DLAENNKGARVLVVCSEITAVTFRGPSETHLDSLVGQALFGDGAAAVIIGSDP 228 (228)
T ss_pred HHHHHCCCCEEEEEEEEHHHEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCC
T ss_conf 99982999879999824011030488765677773441202751799971699
No 23
>TIGR01833 HMG-CoA-S_euk hydroxymethylglutaryl-CoA synthase; InterPro: IPR010122 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA . HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria . In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi . In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes , . This entry is specific for eukaryotic HMG-CoA synthase enzymes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process.
Probab=99.89 E-value=6.7e-22 Score=162.99 Aligned_cols=307 Identities=17% Similarity=0.199 Sum_probs=218.3
Q ss_pred CCCCEEEEEEEEECCCCCCCHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEE
Q ss_conf 66620999999735886138889998809997683111475088994898879999999999986430132223442588
Q gi|254780489|r 2 IKSSSCILGFGHAVPNQCIHNSIIERHLNLKLGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTLL 81 (325)
Q Consensus 2 ~~~~~~I~g~g~~lP~~~i~n~~l~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~ 81 (325)
+..++.|+|+-.|+|++-|++.|||+.-+.+.||-.=-.|-..=-++.+.|+...|...|..+++++..|+.++|+.|=+
T Consensus 1 ~p~dVGI~al~~yfP~~yV~Q~~LE~yDgVs~GKYTiGLGq~~mgFc~drEDI~Sl~LTvv~~L~er~~id~~~IGRLEV 80 (461)
T TIGR01833 1 WPKDVGILALEIYFPSQYVDQAELEKYDGVSAGKYTIGLGQTKMGFCTDREDINSLCLTVVSKLMERYQIDYNKIGRLEV 80 (461)
T ss_pred CCCCCEEEEEEEECCCCCCCHHHHHHHCCCCCCCEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEC
T ss_conf 98874068888636887526577863268888950342356620000221015666589999999860787154311010
Q ss_pred EEEEECCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC---CEEEEEEECCCCCCCCCCCCCC
Q ss_conf 43100236887432---21121002386333421012310125676578874388---5058862012244446222443
Q gi|254780489|r 82 ATSTPDHLLPPSSP---LITHRLGLMQSGAIDLTGACAGFLYALVMADSYINSHQ---KPVLIIAANLLSRRINLEDKDT 155 (325)
Q Consensus 82 ~s~t~d~~~P~~a~---~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~g~---~~vLVv~~e~~S~~~d~~d~~~ 155 (325)
+|.|=-.-..|.=+ .+-++=|.+++.-.|-.+||.|+++||--|-+||++.. |.+||||+|+. .+.... .
T Consensus 81 GTETiiDKSKSVKtVLMQLF~~sGNTDvEGiDt~NACYGGTaALFNa~~WiESssWDGRyalVVagDiA--vYa~G~--A 156 (461)
T TIGR01833 81 GTETIIDKSKSVKTVLMQLFEESGNTDVEGIDTVNACYGGTAALFNAINWIESSSWDGRYALVVAGDIA--VYAKGN--A 156 (461)
T ss_pred CCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEE--ECCCCC--C
T ss_conf 425341001035577677542057954353255341122479997545432126753034124532111--348889--8
Q ss_pred CCCCCCCEEEEEECCC-CCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC-----C
Q ss_conf 4325442001122057-654445311355321367765278306986676544556552322451454343201-----0
Q gi|254780489|r 156 AIIFGDAAGAVVLAPS-PLKDKSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVK-----I 229 (325)
Q Consensus 156 ~~lfGDgA~A~il~~~-~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~-----~ 229 (325)
+.+=|-||.||+|++. |-.-+.++.++++.+..++| =|.-.+..|.-... +.. +-+-.|.. +
T Consensus 157 RPTGGAGavAmLiGp~APivfe~glR~shM~HaYDFY----KPdL~SEYP~VDGk----lS~----~CYl~ALD~cY~~y 224 (461)
T TIGR01833 157 RPTGGAGAVAMLIGPNAPIVFERGLRASHMQHAYDFY----KPDLASEYPVVDGK----LSI----QCYLSALDRCYKSY 224 (461)
T ss_pred CCCHHHHHHHHHHCCCCCEEECCCCCHHHHCCCCCCC----CCCCCCCCCEECCC----CCH----HHHHHHHHHHHHHH
T ss_conf 8752899999975689888742775412221453336----88883168504453----058----78998988888998
Q ss_pred HHHHHHHHH---HH-HCCCCCCCCEEEECCCCCHHHHH-HHHHC------------------------CC---------C
Q ss_conf 036789889---97-40120012246305654138999-99971------------------------97---------8
Q gi|254780489|r 230 MAQSAKQSL---RK-SDLQPQDINRFIPHQANSRIIQK-VCEKI------------------------GL---------S 271 (325)
Q Consensus 230 ~~~~i~~~l---~~-~gl~~~did~~i~Hq~~~~~~~~-~~~~l------------------------gi---------~ 271 (325)
-.+..+... .+ ...+++++|++|||.|-=++.++ +++.| ++ +
T Consensus 225 ~~K~~~~~~~~~~~~~~f~l~~~dy~vFH~PyCKlVqKS~ARLlyNDF~~~~~~~~~~~~~~~~~~l~~l~~~~ty~drd 304 (461)
T TIGR01833 225 CKKIEKQLGKSGKDGRKFTLDDFDYMVFHSPYCKLVQKSLARLLYNDFLANPSSETDTALYEVLEALSTLKLEDTYTDRD 304 (461)
T ss_pred HHHHHHHHHCCCCCCCCCCHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHH
T ss_conf 88899874202446763306344736750773226899999998888763223445566666677653377112002325
Q ss_pred HHHH--------------HH--HHHHCCCCCCCHHHHHHHHHHHHCCCC--CCCEEEEEEECCCCCCCCCC
Q ss_conf 6570--------------02--185409330005999999999806789--99899999861551020101
Q gi|254780489|r 272 KRIM--------------VN--SLKDFGNSSSASIPLSLSLENQRKPFQ--KGEKILTISCRRGNDRGIYC 324 (325)
Q Consensus 272 ~~~~--------------~~--~l~~~GN~~sAsi~~~L~~~~~~g~i~--~Gd~vll~~~G~G~s~ga~l 324 (325)
.||. ++ .-.+.|||.+||++-.|.-++.+.... .|.||.+.|.|+|+.+-.+.
T Consensus 305 ~EK~~~~~sk~~f~~k~~~Sl~~~~~~GNMYT~SlYg~laSLL~~~~~~eLaGkRv~~FSYGSGlAAs~FS 375 (461)
T TIGR01833 305 LEKAFMKISKELFDKKVKPSLLLPTQVGNMYTASLYGCLASLLSSKSADELAGKRVGLFSYGSGLAASLFS 375 (461)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCEEEEEECCHHHHHHHEE
T ss_conf 88999999999886102000210005786400789999999974078013077569986362455432110
No 24
>pfam08541 ACP_syn_III_C 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal. This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.41, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria.
Probab=99.88 E-value=3.6e-23 Score=171.33 Aligned_cols=88 Identities=39% Similarity=0.643 Sum_probs=85.3
Q ss_pred HHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCC
Q ss_conf 99740120012246305654138999999719786570021854093300059999999998067899989999986155
Q gi|254780489|r 238 LRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNSLKDFGNSSSASIPLSLSLENQRKPFQKGEKILTISCRRG 317 (325)
Q Consensus 238 l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~l~~~GN~~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~G 317 (325)
|+++|++++|||||++||+|+++++.++++||+|+||++.++++||||+|||+|++|++++++++++|||+|++++||+|
T Consensus 1 L~~~g~~~~dId~~i~Hq~~~~~~~~i~~~lgi~~~k~~~~~~~~GN~~sasip~~L~~~~~~~~i~~Gd~vll~~~G~G 80 (90)
T pfam08541 1 LEKAGLTPDDIDWFVPHQANLRIIDAVAKRLGLPPEKVVVNLDRYGNTSAASIPLALDEAVEEGKLKPGDLVLLVGFGAG 80 (90)
T ss_pred CCCCCCCHHHCCEEEECCCCHHHHHHHHHHHCCCHHHCEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCC
T ss_conf 94404997999999978888899999999819791325032440377620239999999998199999998999987210
Q ss_pred CCCCCCCC
Q ss_conf 10201019
Q gi|254780489|r 318 NDRGIYCL 325 (325)
Q Consensus 318 ~s~ga~lL 325 (325)
++||++++
T Consensus 81 ~s~~~~v~ 88 (90)
T pfam08541 81 LTWGAAVL 88 (90)
T ss_pred HHHEEEEE
T ss_conf 41179899
No 25
>KOG1393 consensus
Probab=99.86 E-value=2.5e-20 Score=152.74 Aligned_cols=302 Identities=19% Similarity=0.195 Sum_probs=207.0
Q ss_pred CEEEEEEEEECCCCCCCHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
Q ss_conf 20999999735886138889998809997683111475088994898879999999999986430132223442588431
Q gi|254780489|r 5 SSCILGFGHAVPNQCIHNSIIERHLNLKLGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTLLATS 84 (325)
Q Consensus 5 ~~~I~g~g~~lP~~~i~n~~l~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~ 84 (325)
++.|.++-.|+|.+.|+++|+++..+.+.++..-..|-.+-.++.+.|+...|+..+.++++++-+++++.|+.|-++|.
T Consensus 11 dvGI~aieiyfP~~yV~Q~elEk~d~vs~gKytIGLGq~~MgfcsdrEDi~Sl~ltvvs~Lmery~i~~~~IGRLEVGTE 90 (462)
T KOG1393 11 DVGIIAIEIYFPSQYVDQEELEKFDGVSAGKYTIGLGQTQMGFCSDREDIISLSLTVVSRLMERYNIDPDSIGRLEVGTE 90 (462)
T ss_pred CCCEEEEEEECCCCCCCHHHHHHCCCCCCCCEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEECCE
T ss_conf 35426899976756667666762488544625763475121253763320035599999999983898656411773230
Q ss_pred EECCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC---CCEEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 002368874322---112100238633342101231012567657887438---85058862012244446222443432
Q gi|254780489|r 85 TPDHLLPPSSPL---ITHRLGLMQSGAIDLTGACAGFLYALVMADSYINSH---QKPVLIIAANLLSRRINLEDKDTAII 158 (325)
Q Consensus 85 t~d~~~P~~a~~---v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~g---~~~vLVv~~e~~S~~~d~~d~~~~~l 158 (325)
|--.-..+.-.. +-.+-|..++...|..++|.|+.+||--|-+|+++. .+.++|||+|+. . |.+-..+.+
T Consensus 91 TiiDKSKSVKt~LMqLF~~sgNtdIEGiDttnACYGGtaALfnavnWiESssWDGr~aivV~gDIA--v--Y~~G~aRpT 166 (462)
T KOG1393 91 TIIDKSKSVKTVLMQLFEESGNTDIEGIDTTNACYGGTAALFNAVNWIESSSWDGRYAIVVCGDIA--V--YAKGNARPT 166 (462)
T ss_pred ECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEE--E--ECCCCCCCC
T ss_conf 024532579999999710138975434434430123389998776552114457741489973378--7--147887777
Q ss_pred CCCCEEEEEECCCCC-CCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHH------
Q ss_conf 544200112205765-4445311355321367765278306986676544556552322451454343201003------
Q gi|254780489|r 159 FGDAAGAVVLAPSPL-KDKSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMA------ 231 (325)
Q Consensus 159 fGDgA~A~il~~~~~-~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~------ 231 (325)
-|-||.|+++++... .-++++.++++...- |++. |.-.+..|. .+|+.-.....+.+-
T Consensus 167 GGAgAVAmLIgPnApi~ferglr~thM~hay---DFyK-Pdl~SEyPv-----------VDGklSi~cYl~Ald~cY~~~ 231 (462)
T KOG1393 167 GGAGAVAMLIGPNAPIIFERGLRATHMQHAY---DFYK-PDLLSEYPV-----------VDGKLSIQCYLSALDRCYTVY 231 (462)
T ss_pred CCCCEEEEEECCCCCEEECCCCHHHHHHHHH---HCCC-CCCCCCCCE-----------ECCEEHHHHHHHHHHHHHHHH
T ss_conf 8733589997699855744530344656543---0148-887786862-----------568021898999999999999
Q ss_pred --HHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHC--------------------------------------CCC
Q ss_conf --6789889974012001224630565413899999971--------------------------------------978
Q gi|254780489|r 232 --QSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKI--------------------------------------GLS 271 (325)
Q Consensus 232 --~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~l--------------------------------------gi~ 271 (325)
+..++-.+.-+..++++|++++|.+--++.++-..+| .+.
T Consensus 232 ~kK~~~~~~~~~~~~l~~fdy~ifHsP~cKlvqKs~arl~ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~~ek~~~~~s 311 (462)
T KOG1393 232 RKKIAAQWQKSGSDNLNSFDYIIFHSPYCKLVQKSLARLLYNDFLLNPSQLPESAGLESTLKLDESYTDRDLEKAFIKIS 311 (462)
T ss_pred HHHHHHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999974335676546577599857035667877777543144414001542001223333000111047788899876
Q ss_pred ----HHHH-HH-HH-HHCCCCCCCHHHHHHHHHHHHC--CCCCCCEEEEEEECCCCCCCCCCC
Q ss_conf ----6570-02-18-5409330005999999999806--789998999998615510201019
Q gi|254780489|r 272 ----KRIM-VN-SL-KDFGNSSSASIPLSLSLENQRK--PFQKGEKILTISCRRGNDRGIYCL 325 (325)
Q Consensus 272 ----~~~~-~~-~l-~~~GN~~sAsi~~~L~~~~~~g--~i~~Gd~vll~~~G~G~s~ga~lL 325 (325)
.+|. .. .+ .+.||+.++|++..|..++... .--.|.+|.+++.|+|..+-.++|
T Consensus 312 ~~~~~~Kt~~sl~~~~~~GNmYTaSly~~l~sll~~~~~d~l~Gkrig~FSYGSGlAAs~fs~ 374 (462)
T KOG1393 312 KPIFKKKTKPSLLAPRRNGNMYTASLYASLASLLSAVPADELAGKRIGMFSYGSGLAASMFSL 374 (462)
T ss_pred HHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHCCEEEEEEECCCCHHHEEEE
T ss_conf 777775135116741247742249899999998851660443103788996057641204778
No 26
>pfam01154 HMG_CoA_synt_N Hydroxymethylglutaryl-coenzyme A synthase N terminal.
Probab=99.86 E-value=4.9e-21 Score=157.34 Aligned_cols=163 Identities=18% Similarity=0.198 Sum_probs=143.8
Q ss_pred CEEEEEEEEECCCCCCCHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
Q ss_conf 20999999735886138889998809997683111475088994898879999999999986430132223442588431
Q gi|254780489|r 5 SSCILGFGHAVPNQCIHNSIIERHLNLKLGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTLLATS 84 (325)
Q Consensus 5 ~~~I~g~g~~lP~~~i~n~~l~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~ 84 (325)
++.|.+++.|+|.+.++..++++..|...+++.+..|.++..+.+++|+..+||..|++++|++.+++|++|++|+++|.
T Consensus 1 ~VGI~~i~~Y~P~~~v~~~~La~~rg~d~~K~~~GlG~~~mav~~~~ED~vTmAanAa~~ll~~~~i~~~~Ig~l~vgTE 80 (171)
T pfam01154 1 DVGIVALEIYFPSQYVDQAELEKYDGVSAGKYTIGLGQTKMGFCTDREDINSLCLTVVQKLMERNNLDYDCIGRLEVGTE 80 (171)
T ss_pred CCCEEEEEEECCHHEECHHHHHHHHCCCHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEECCC
T ss_conf 98987898847711135999999959898885204586354279997279999999999999873999888407996377
Q ss_pred EECCCCCCCCCCCCCCCCCC-C--CCCCCCCCCCCCCHHHHHHHHHHHHCCC---CEEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 00236887432211210023-8--6333421012310125676578874388---5058862012244446222443432
Q gi|254780489|r 85 TPDHLLPPSSPLITHRLGLM-Q--SGAIDLTGACAGFLYALVMADSYINSHQ---KPVLIIAANLLSRRINLEDKDTAII 158 (325)
Q Consensus 85 t~d~~~P~~a~~v~~~Lg~~-~--~~~~di~~~C~g~l~aL~~A~~~i~~g~---~~vLVv~~e~~S~~~d~~d~~~~~l 158 (325)
+.-+...+.+.+|++.||++ + +..+|+.++|.|++.||+.|.+|++++. |++|||++|+.- ++.... ..+
T Consensus 81 S~iD~SKs~~t~l~~ll~~~~~~~~~~~e~k~ACyggTaAL~~a~~~v~s~~~~~k~alVV~sDiA~--y~~~~~--e~T 156 (171)
T pfam01154 81 TIIDKSKSVKTVLMQLFEESGNTDIEGIDTTNACYGGTAALFNALNWIESSSWDGRYALVVAGDIAI--YAKGNA--RPT 156 (171)
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC--CCCCCC--CCC
T ss_conf 6456655689999998376578874033300106989999999999998288789639999841001--379998--756
Q ss_pred CCCCEEEEEECCC
Q ss_conf 5442001122057
Q gi|254780489|r 159 FGDAAGAVVLAPS 171 (325)
Q Consensus 159 fGDgA~A~il~~~ 171 (325)
-|-||.|||+++.
T Consensus 157 qGAGAVAmLv~~n 169 (171)
T pfam01154 157 GGAGAVAMLIGPN 169 (171)
T ss_pred CCCCEEEEEECCC
T ss_conf 7703589997589
No 27
>pfam08392 FAE1_CUT1_RppA FAE1/Type III polyketide synthase-like protein. The members of this family are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region featured in this family contains the active site residues, as well as motifs involved in substrate binding.
Probab=99.77 E-value=6.3e-18 Score=137.03 Aligned_cols=171 Identities=14% Similarity=0.275 Sum_probs=131.6
Q ss_pred CCCEEEEEEEEECCC--CCCCHHHHHHHHCC----CH------HHEEECCCCCEEEEECC-------CCCH-------HH
Q ss_conf 662099999973588--61388899988099----97------68311147508899489-------8879-------99
Q gi|254780489|r 3 KSSSCILGFGHAVPN--QCIHNSIIERHLNL----KL------GVIEQKTGIKYRYWAEK-------HETL-------TD 56 (325)
Q Consensus 3 ~~~~~I~g~g~~lP~--~~i~n~~l~~~~~~----~~------~~i~~~tGI~~R~~~~~-------~e~~-------~~ 56 (325)
.+.+|++...+|-|+ .+++.+.+.++... .+ .+|.+++||.+..+.++ +.+. ..
T Consensus 6 ~r~vYLvDfaC~kp~~~~kv~~~~~~e~~~~~~~f~~~s~~F~~kil~rSGlG~eTy~P~~~~~~p~~~s~~~ar~Eae~ 85 (290)
T pfam08392 6 PRPVYLVDYACYKPPDDRKVSTETFMEHIRRNGKFDEESLDFQRKILERSGLGEETYVPRSVLEIPPNPTMAEAREEAEE 85 (290)
T ss_pred CCCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHH
T ss_conf 99889985532079720316999999999865899868999999999964899988578254258999879999999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC-CCCCCCCC-CCCCCCHHHHHHHHHHHHCCC-
Q ss_conf 999999998643013222344258843100236887432211210023-86333421-012310125676578874388-
Q gi|254780489|r 57 IAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLM-QSGAIDLT-GACAGFLYALVMADSYINSHQ- 133 (325)
Q Consensus 57 la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~-~~~~~di~-~~C~g~l~aL~~A~~~i~~g~- 133 (325)
.-..|..++|++.+++|.|||.||+..+ -....|+.+++|.++.|++ ++.+|.++ +||++++.++++|.++++.+.
T Consensus 86 v~f~avd~Lf~ktgv~P~dIdiLVvNcS-lf~PtPSLsamivNrykmR~di~s~nLsGMGCSAglIsIdLAk~lL~~~~n 164 (290)
T pfam08392 86 VMFGAVDELFAKTGVRPRDIGILVVNCS-LFNPTPSLSAMIVNRYKMRGDIKSYNLSGMGCSAGLISIDLAKDLLQVHPN 164 (290)
T ss_pred HHHHHHHHHHHHCCCCHHHCCEEEEECC-CCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 9999999999973998768999999677-888885289999886068643006336676511347579999999984899
Q ss_pred CEEEEEEECCCCCCC-CCCCCC---CCCCCCCCEEEEEECCCCCC
Q ss_conf 505886201224444-622244---34325442001122057654
Q gi|254780489|r 134 KPVLIIAANLLSRRI-NLEDKD---TAIIFGDAAGAVVLAPSPLK 174 (325)
Q Consensus 134 ~~vLVv~~e~~S~~~-d~~d~~---~~~lfGDgA~A~il~~~~~~ 174 (325)
.++|||+.|..|..+ .=+||+ +..+|.-|++|++|++.+..
T Consensus 165 s~ALVvSTE~it~n~Y~G~~rsmLl~NcLFR~GgAAiLLSN~~~~ 209 (290)
T pfam08392 165 TYALVVSTENITPNWYAGNDRSMLLPNCLFRMGGAAILLSNKPAD 209 (290)
T ss_pred CEEEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCC
T ss_conf 659999853045445358736650140113577147983058443
No 28
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.73 E-value=1.1e-16 Score=128.84 Aligned_cols=202 Identities=18% Similarity=0.191 Sum_probs=140.9
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 98879999999999986430132223442588431002368874322112100238633342101231012567657887
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYI 129 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i 129 (325)
.+.+..||+.+|+++||++++++|++||-|+++...+.......+..++..+|+++.+++.++.+|++++.++..|...|
T Consensus 12 ~~~s~~eL~~~a~~~Al~dagi~~~~ID~v~~g~~~~~~~~~~~~~~~a~~~G~~~~~~~~v~~~c~Sg~~ai~~Aa~~I 91 (375)
T cd00829 12 SDRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLLGKPATRVEAAGASGSAAVRAAAAAI 91 (375)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCHHHHCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf 99699999999999999983919899499999912875534769999999829999865886898869999999999999
Q ss_pred HCC-CCEEEEEEECCCCCCCCCC---------------------------------------------------------
Q ss_conf 438-8505886201224444622---------------------------------------------------------
Q gi|254780489|r 130 NSH-QKPVLIIAANLLSRRINLE--------------------------------------------------------- 151 (325)
Q Consensus 130 ~~g-~~~vLVv~~e~~S~~~d~~--------------------------------------------------------- 151 (325)
++| .+.+|+++.|.+|..-.+.
T Consensus 92 ~~G~~~~vl~~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~~g~~re~~~~~a~~~~~~A~~ 171 (375)
T cd00829 92 ASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAARRYMHRYGTTREDLAKVAVKNHRNAAR 171 (375)
T ss_pred HCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
T ss_conf 77999989999875167787655544456772033320244665789999999999999797999999999999986442
Q ss_pred CCC-------------------------CCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCC
Q ss_conf 244-------------------------3432544200112205765444531135532136776527830698667654
Q gi|254780489|r 152 DKD-------------------------TAIIFGDAAGAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSPAG 206 (325)
Q Consensus 152 d~~-------------------------~~~lfGDgA~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~ 206 (325)
++. ..-.+.|||+|+||..++...+.+.-...+...+... .+..
T Consensus 172 np~A~~~~~~t~e~~~~~~~i~~Pl~~~~~~~~~DGAaa~vl~s~~~A~~~~~~p~~i~g~~~~~-----------~~~~ 240 (375)
T cd00829 172 NPYAQFRKPITVEDVLNSRMIADPLRLLDCCPVSDGAAAVVLASEERARELTDRPVWILGVGAAS-----------DTPS 240 (375)
T ss_pred CCCCCCCCCCCHHHHHCCCCCCCCCCHHHCCCCCCCCEEEEEECHHHHHHCCCCCEEEEEEEEEE-----------CCCC
T ss_conf 86120258858999823476446621431576666405899963999987699937999999995-----------2654
Q ss_pred CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHH
Q ss_conf 4556552322451454343201003678988997401200122463056541389999997197865
Q gi|254780489|r 207 TNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKR 273 (325)
Q Consensus 207 ~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~ 273 (325)
....... .........++++|+++|++++|||.|=+|-+-....-...+.||+.++
T Consensus 241 ~~~~~~~-----------~~~~~~~~A~~~al~~aGl~~~DiD~~Ei~eaFa~~~l~~~e~lGl~~~ 296 (375)
T cd00829 241 LSERDDF-----------LSLDAARLAARRAYKMAGITPDDIDVAELYDCFTIAELLALEDLGFCEK 296 (375)
T ss_pred CCCCCCC-----------CCCHHHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHCCCCCC
T ss_conf 3567852-----------2232599999999998199978765642015766999999998099977
No 29
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.69 E-value=3.4e-16 Score=125.71 Aligned_cols=244 Identities=21% Similarity=0.242 Sum_probs=153.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCE----EEEEEEEECC---------------------CCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999999999986430132223442----5884310023---------------------68874322112100238633
Q gi|254780489|r 54 LTDIAIQAGDIALRNANIKKDSISL----TLLATSTPDH---------------------LLPPSSPLITHRLGLMQSGA 108 (325)
Q Consensus 54 ~~~la~~Aa~~aL~~a~~~~~dId~----ii~~s~t~d~---------------------~~P~~a~~v~~~Lg~~~~~~ 108 (325)
.+-+|++|+++||++||++++++.- |+++++..++ ..+..+.+|...||++. ++
T Consensus 11 vsl~al~aa~eAl~dAGl~~~~~~~~r~GV~~Gs~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~gl~G-p~ 89 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIHG-PA 89 (332)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC-CC
T ss_conf 99999999999999759993445788889999968831888985312322368642466553489999999968989-63
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCC-CCEEEEEEECCCCCC-----------C------C-CCCCCCCCCCCCCEEEEEEC
Q ss_conf 342101231012567657887438-850588620122444-----------4------6-22244343254420011220
Q gi|254780489|r 109 IDLTGACAGFLYALVMADSYINSH-QKPVLIIAANLLSRR-----------I------N-LEDKDTAIIFGDAAGAVVLA 169 (325)
Q Consensus 109 ~di~~~C~g~l~aL~~A~~~i~~g-~~~vLVv~~e~~S~~-----------~------d-~~d~~~~~lfGDgA~A~il~ 169 (325)
+-++.+|++++.||..|.++|+.| .+.++|.++|..+.. . . |......+++|+||+++||+
T Consensus 90 ~tv~taCaS~l~Ai~~A~~~i~~G~~d~aivgg~~~~~~~~~~~~~~~~~~~~~~~~~rpFd~~~~G~v~gEGa~~lvLe 169 (332)
T cd00825 90 YDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALVVE 169 (332)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHH
T ss_conf 03135416889999999999983899874620312117989999999727789898878887889972002654035540
Q ss_pred CCCCCCC--CCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCC
Q ss_conf 5765444--53113553213677652783069866765445565523224514543432010036789889974012001
Q gi|254780489|r 170 PSPLKDK--SGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQD 247 (325)
Q Consensus 170 ~~~~~~~--~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~d 247 (325)
+.+...+ ..|.... ...+...+. ........+ .+.+.++++++|++++++++|
T Consensus 170 ~~~~A~~rg~~i~a~i-~g~~~~~dg----------------~~~~~~~p~--------~~~~~~ai~~Al~~agi~p~~ 224 (332)
T cd00825 170 ELEHALARGAHIYAEI-VGTAATIDG----------------AGMGAFAPS--------AEGLARAAKEALAVAGLTVWD 224 (332)
T ss_pred HHHHHHHCCCCEEEEE-CCCEEECCC----------------CCCCCCCCC--------HHHHHHHHHHHHHHCCCCCCC
T ss_conf 0888875289620331-134587789----------------878887979--------999999999999984988200
Q ss_pred CCEEEECCCCCHHHH-----HHHHHCCCCHHHHHH-HHHHCCCCCCCHHHHHHHH---HHHHCCCCC-------------
Q ss_conf 224630565413899-----999971978657002-1854093300059999999---998067899-------------
Q gi|254780489|r 248 INRFIPHQANSRIIQ-----KVCEKIGLSKRIMVN-SLKDFGNSSSASIPLSLSL---ENQRKPFQK------------- 305 (325)
Q Consensus 248 id~~i~Hq~~~~~~~-----~~~~~lgi~~~~~~~-~l~~~GN~~sAsi~~~L~~---~~~~g~i~~------------- 305 (325)
|||+-.|-.+....+ ++.+.++- ....+. +=..+||+.+|+-.+.+.. +++.+.+.|
T Consensus 225 I~yI~ahgtGt~~~D~~E~~Al~~~fg~-~~~~v~S~Ks~~GH~~~AsG~~~li~~~lal~~~~ipp~~n~~~~~~~~~~ 303 (332)
T cd00825 225 IDYLVAHGTGTPIGDVKELKLLRSEFGD-KSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEELDEAGLN 303 (332)
T ss_pred CCEEEECCCCCCCCCHHHHHHHHHHHCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 1479917786855559999999998578-998210574564455265699999999999863960899998999833256
Q ss_pred ---------CCEEEEEEECCCCCCCCCC
Q ss_conf ---------9899999861551020101
Q gi|254780489|r 306 ---------GEKILTISCRRGNDRGIYC 324 (325)
Q Consensus 306 ---------Gd~vll~~~G~G~s~ga~l 324 (325)
.+.++.-+||-|-+-..++
T Consensus 304 ~~~~~~~~~~~~~~~nsfGfGG~Na~vv 331 (332)
T cd00825 304 IVTETTPRELRTALLNGFGLGGTNATLV 331 (332)
T ss_pred CCCCCCCCCCCEEEEECCCCCCEEEEEE
T ss_conf 6777768999899996702681406886
No 30
>pfam02797 Chal_sti_synt_C Chalcone and stilbene synthases, C-terminal domain. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain.
Probab=99.68 E-value=1.8e-16 Score=127.51 Aligned_cols=117 Identities=17% Similarity=0.165 Sum_probs=97.4
Q ss_pred CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHH---HHHHHHCCCC
Q ss_conf 5655232245145434320100367898899740120012246305654138999999719786570---0218540933
Q gi|254780489|r 209 THDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIM---VNSLKDFGNS 285 (325)
Q Consensus 209 ~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~---~~~l~~~GN~ 285 (325)
..+..+.+.-.++|....-+++.+.+.++|+++|++..|++++++|++++++++++.+.|++++++. +.+|++|||+
T Consensus 21 i~~~Gf~~~Ls~~VP~~i~~~l~~~v~~~L~~~gl~~~d~~~wa~HPGG~~Ilda~~~~L~L~~~~l~~Sr~vL~~~GNm 100 (151)
T pfam02797 21 LREEGLTFHLLKDVPQLISKNIEKCLVEAFDPLGISDWNSIFWIAHPGGPAILDQVEAKLGLKPEKLRASRHVLSEYGNM 100 (151)
T ss_pred EECCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCH
T ss_conf 86698899988263699999899999999987499833245278879978999999998199989999999999975861
Q ss_pred CCCHHHHHHHHHHHH----CCCCCC---CEEEEEEECCCCCCCCCCC
Q ss_conf 000599999999980----678999---8999998615510201019
Q gi|254780489|r 286 SSASIPLSLSLENQR----KPFQKG---EKILTISCRRGNDRGIYCL 325 (325)
Q Consensus 286 ~sAsi~~~L~~~~~~----g~i~~G---d~vll~~~G~G~s~ga~lL 325 (325)
+|++++++|++++++ +.-.+| |+.++++||+|+|...+||
T Consensus 101 SS~tVlfVLe~~~~~~~~~~~~~~g~~~e~gl~~AfGPG~t~E~~LL 147 (151)
T pfam02797 101 SSACVLFILDEMRKKSLKKGKSTTGEGLEWGVLFGFGPGLTVETVVL 147 (151)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHH
T ss_conf 89999999999997664447888888865689999688299999997
No 31
>pfam08545 ACP_syn_III 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III. This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.41, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria.
Probab=99.65 E-value=2e-16 Score=127.20 Aligned_cols=79 Identities=46% Similarity=0.718 Sum_probs=72.4
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCC-CCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEC
Q ss_conf 342101231012567657887438-8505886201224444622244343254420011220576544453113553213
Q gi|254780489|r 109 IDLTGACAGFLYALVMADSYINSH-QKPVLIIAANLLSRRINLEDKDTAIIFGDAAGAVVLAPSPLKDKSGILGIELTSD 187 (325)
Q Consensus 109 ~di~~~C~g~l~aL~~A~~~i~~g-~~~vLVv~~e~~S~~~d~~d~~~~~lfGDgA~A~il~~~~~~~~~~il~~~~~s~ 187 (325)
|||+.+|+||++||++|..++++| .+++|||++|++|+++||+|+.+.++|||||+|+||++.+. ++.+++++.+.||
T Consensus 1 fDi~~~Csg~~~aL~~A~~~i~sg~~~~vLvv~~e~~s~~~~~~d~~~~~lfGDga~A~il~~~~~-~~~~il~~~~~td 79 (80)
T pfam08545 1 FDINAACSGFVYALSTAAALIRSGRAKNVLVVGAETLSRILDWTDRSTAVLFGDGAGAVVLEATEE-GGARILSSVLGSD 79 (80)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCEEEEEEEEECCC-CCCEEEEEEEECC
T ss_conf 960641488999999999999879988589985112455368667724699864026999997178-9984888898458
Q ss_pred C
Q ss_conf 6
Q gi|254780489|r 188 G 188 (325)
Q Consensus 188 ~ 188 (325)
+
T Consensus 80 g 80 (80)
T pfam08545 80 G 80 (80)
T ss_pred C
T ss_conf 9
No 32
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.64 E-value=2e-14 Score=114.10 Aligned_cols=226 Identities=16% Similarity=0.188 Sum_probs=142.1
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 98879999999999986430132223442588431002--3688743221121002386333421012310125676578
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPD--HLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADS 127 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d--~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~ 127 (325)
++.+..+|+.+|+++||+++|++|+|||.+++++.... ...| +..+++.+|++..+.+.++.+|+++..++..|..
T Consensus 17 ~~~s~~eL~~eA~~~Al~dAgl~~~dVD~v~~G~~~~~g~~~~~--~~~~a~~~Gl~~~~~~~v~~~caSG~~av~~A~~ 94 (385)
T PRK12578 17 DDVSIQELAWESIKEALEDAGITQKDVDLVVIGSTAYRGVELYP--APPVSEYSGLTGKVPLRVEAACATGSAAAFTAYT 94 (385)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCCCCCCH--HHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHH
T ss_conf 99799999999999999984929899599999456755522362--8999997599898866881667789999999999
Q ss_pred HHHCC-CCEEEEEEECCCCCCC--------------CCCCC---------------------------------------
Q ss_conf 87438-8505886201224444--------------62224---------------------------------------
Q gi|254780489|r 128 YINSH-QKPVLIIAANLLSRRI--------------NLEDK--------------------------------------- 153 (325)
Q Consensus 128 ~i~~g-~~~vLVv~~e~~S~~~--------------d~~d~--------------------------------------- 153 (325)
.|++| .+.+|+++.|.+|+.- .|...
T Consensus 95 ~I~sG~~dvvl~~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~~al~a~~ym~~yg~~~e~la~vav~~~~~A 174 (385)
T PRK12578 95 SIASGLADIAMAVGVDKMTEVDTSTSLAIGGRGGNYQWEFHMYGTTFPTYYALYATRHMAVFGTTEEQMALVSVKAHKYA 174 (385)
T ss_pred HHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 99838599999945520577886432011455565320002346652799999999999996969999999999844876
Q ss_pred -----------C------------------CCCCCCCCEEEEEECCCCCCCCCCCE-EEEEEECCCCCCEEEEECCCCCC
Q ss_conf -----------4------------------34325442001122057654445311-35532136776527830698667
Q gi|254780489|r 154 -----------D------------------TAIIFGDAAGAVVLAPSPLKDKSGIL-GIELTSDGSKYDLIKIPTGGSTS 203 (325)
Q Consensus 154 -----------~------------------~~~lfGDgA~A~il~~~~~~~~~~il-~~~~~s~~~~~~~~~~~~~~~~~ 203 (325)
. .+-..+|||+|+||...+...+.++- ...+...+...+...+
T Consensus 175 ~~np~A~~~~~~t~edvl~s~~i~~Pl~~~dc~~~sDGAaAvvl~s~e~ar~lg~~~pv~I~g~g~~~~~~~~------- 247 (385)
T PRK12578 175 SMNPKAHFQKPVTVEDVLKSRVISWPIKLLDSSPISDGSATAIFASEEKVRELKIDTPVWIDGIGYASDTSYI------- 247 (385)
T ss_pred HCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHCCCCCCCCEEEEECCHHHHHHCCCCCCEEEEEEEECCCCCCC-------
T ss_conf 5696321468778889731576557742764046679846799716999985499986799989852566442-------
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHH----------
Q ss_conf 6544556552322451454343201003678988997401200122463056541389999997197865----------
Q gi|254780489|r 204 PAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKR---------- 273 (325)
Q Consensus 204 ~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~---------- 273 (325)
..+.... .........+++++++|++++|||.+-+|-+-...--...+.||+.+.
T Consensus 248 ----~~~~~~~-----------~~~~~~~A~~~a~~~AGl~~~DiDv~ei~D~Ft~~~l~~~E~lG~~~~Ge~~~~~~~g 312 (385)
T PRK12578 248 ----ARRGEWV-----------GLKATRLAAEMAYKMAKISPNDIEYATVHDCFTIAEIMAYEDLGFVEKGKGGKLLEEG 312 (385)
T ss_pred ----CCCCCCC-----------CCHHHHHHHHHHHHHHCCCHHHCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHCC
T ss_conf ----2356544-----------5638999999999871998665866520354278899999985999888379998678
Q ss_pred ------HHHHH----HHHCCCCCCCHHHHHHHHHHH
Q ss_conf ------70021----854093300059999999998
Q gi|254780489|r 274 ------IMVNS----LKDFGNSSSASIPLSLSLENQ 299 (325)
Q Consensus 274 ------~~~~~----l~~~GN~~sAsi~~~L~~~~~ 299 (325)
+.+.| +--+||...++-...+.++..
T Consensus 313 ~~~~~G~~pvN~~GG~ls~Ghp~gatG~~~v~E~v~ 348 (385)
T PRK12578 313 QTEKGGKVAVNLFGGLKAKGHPLGATGLSMIYEITK 348 (385)
T ss_pred CCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHH
T ss_conf 745699851528830764798455289999999999
No 33
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.63 E-value=6.5e-15 Score=117.33 Aligned_cols=98 Identities=15% Similarity=0.137 Sum_probs=85.6
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9887999999999998643013222344258843100236887432211210023-863334210123101256765788
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADSY 128 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~~ 128 (325)
.+.++.+|+..+++++|++++++|++||.|+++++.+....+..+..+.-..|++ +++++.|+++|++++.|+..|...
T Consensus 18 ~~~~~~~L~~~ai~~al~~agl~~~~Id~vi~G~~~~~g~g~n~aR~~al~aGlp~~vp~~tV~~aCaSG~~Ai~~A~~~ 97 (386)
T cd00751 18 KDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVNRVCGSGLQAVALAAQS 97 (386)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHH
T ss_conf 88989999999999999984989899998999950666656639999999769998886588842216879999999741
Q ss_pred HHCC-CCEEEEEEECCCCCC
Q ss_conf 7438-850588620122444
Q gi|254780489|r 129 INSH-QKPVLIIAANLLSRR 147 (325)
Q Consensus 129 i~~g-~~~vLVv~~e~~S~~ 147 (325)
|++| .+.+|+++.|.+|+.
T Consensus 98 I~sG~~dvvla~GvEsmS~~ 117 (386)
T cd00751 98 IAAGEADVVVAGGVESMSRA 117 (386)
T ss_pred HCCCCCCEEEEECCCCCCCC
T ss_conf 10799778887244535657
No 34
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.63 E-value=6.6e-15 Score=117.29 Aligned_cols=201 Identities=21% Similarity=0.228 Sum_probs=132.8
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 9887999999999998643013222344258843100236--88743221121002386333421012310125676578
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHL--LPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADS 127 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~--~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~ 127 (325)
.+.+..||+.+|+++||++++++|+|||-+++++..+... .+..+..++..+|+++.+++.++.+|++++.++..|..
T Consensus 18 ~~~~~~dL~~~a~~~al~~agl~~~~ID~vi~G~~~~g~~~~~~~~a~~~a~~~Gl~~~p~~~v~~~c~SG~~Ai~~Aa~ 97 (389)
T PRK06064 18 WDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSGGRFVGQEHIAALIADYAGLAPIPATRVEAACASGGAAVRQAYL 97 (389)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHH
T ss_conf 99799999999999999980949899599999812766434324099999997599998668993753679999999999
Q ss_pred HHHCC-CCEEEEEEECCCCCCCCCC---------CC--------------------------------------------
Q ss_conf 87438-8505886201224444622---------24--------------------------------------------
Q gi|254780489|r 128 YINSH-QKPVLIIAANLLSRRINLE---------DK-------------------------------------------- 153 (325)
Q Consensus 128 ~i~~g-~~~vLVv~~e~~S~~~d~~---------d~-------------------------------------------- 153 (325)
.|++| .+.+|+.+.|.+|+.-... |+
T Consensus 98 ~I~sG~~dvvlagG~E~ms~~p~~~~~~~~~~~~d~~~~~~~g~~~~~~~a~~a~~~~~~ygitre~~~~~A~~s~~~A~ 177 (389)
T PRK06064 98 AVASGEADVVLAAGVEKMTDVPTPDATEAIARAADREWEEFFGATFPGLYALIARAYMHKYGTTEEDLALVAVKNHYNGS 177 (389)
T ss_pred HHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 99739998999944223577987642112220244220101488719999999999999969699999999997556542
Q ss_pred ---C--------------C-----------CCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCC
Q ss_conf ---4--------------3-----------43254420011220576544453113553213677652783069866765
Q gi|254780489|r 154 ---D--------------T-----------AIIFGDAAGAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSPA 205 (325)
Q Consensus 154 ---~--------------~-----------~~lfGDgA~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~ 205 (325)
. + +-...|||+|+||..++...+.+.....+...+...+...
T Consensus 178 ~np~a~~~~~it~e~~~~~~~i~~pl~~~n~s~~~DGAaAvvl~s~~~A~~l~~~pv~i~g~~~~~~~~~---------- 247 (389)
T PRK06064 178 KNPYAQFQNEITVEQVLNSPYVADPLKLLDCSPITDGAAAVILASEEKAKEYTDTPVWIKASGQASDTIA---------- 247 (389)
T ss_pred CCCHHCCCCCCCHHHHCCCCCCCCCHHHHCCCCCCCCCEEEEEECHHHHHHCCCCCEEEEEEEEEECCCC----------
T ss_conf 3952105688659896454443351022111467887449999259999865899759999999951211----------
Q ss_pred CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCH
Q ss_conf 4455655232245145434320100367898899740120012246305654138999999719786
Q gi|254780489|r 206 GTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSK 272 (325)
Q Consensus 206 ~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~ 272 (325)
....+++.. .......++++|+++|++++|||.+=.|-+-....-...+.||+.+
T Consensus 248 ----------~~~~~~~~~--~~~~~~A~~~al~~aGl~~~DiD~~ElneaFa~~~l~~~e~LGl~~ 302 (389)
T PRK06064 248 ----------LHDRKDFTT--LEAAVVAAEKAYKMAGIDPKDIDVAEVHDCFTIAEILAYEDLGFAK 302 (389)
T ss_pred ----------CCCCCCCCC--CCHHHHHHHHHHHHHCCCHHHCCEEEECCCCHHHHHHHHHHCCCCC
T ss_conf ----------367875345--8728999999999829998887688741554799999999829996
No 35
>PRK06059 lipid-transfer protein; Provisional
Probab=99.62 E-value=4.5e-14 Score=111.87 Aligned_cols=257 Identities=17% Similarity=0.191 Sum_probs=152.0
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 887999999999998643013222344258843100236887--432211210023863334210123101256765788
Q gi|254780489|r 51 HETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPP--SSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSY 128 (325)
Q Consensus 51 ~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~--~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~ 128 (325)
+.+..+|+.+|+++||++||++++|||.+++++..+. ..|. ....+++.||+...++..+..+|+++..++..|...
T Consensus 20 ~r~~~~l~~eA~~~AL~DAGl~~~dVD~v~~~~~~~~-~~~~~~~~~~~a~~lGl~g~p~~~v~~~~asG~~a~~~A~~~ 98 (399)
T PRK06059 20 GRDFTEYGVVAARAALADAGLDWRQVQLVAGADTIRN-GYPGFVAGATFAQKLGWNGVPVTSSYAACASGSQALQSARAQ 98 (399)
T ss_pred CCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCC-CCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 9798999999999999855999899468843034566-777532269999975998863112116248999999999999
Q ss_pred HHCC-CCEEEEEEECCCCCC----------C--CCC--------------------------------------------
Q ss_conf 7438-850588620122444----------4--622--------------------------------------------
Q gi|254780489|r 129 INSH-QKPVLIIAANLLSRR----------I--NLE-------------------------------------------- 151 (325)
Q Consensus 129 i~~g-~~~vLVv~~e~~S~~----------~--d~~-------------------------------------------- 151 (325)
|++| .+.+||+++|..+.. . +|.
T Consensus 99 I~sG~~d~vlvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p~~~Al~a~rym~~yG~t~e~lA~vavk~~~~a~~ 178 (399)
T PRK06059 99 ILAGFCDVALVIGADTTPKGFFAPVGGERKNDPDWQRFHLIGATNTVYFALLARRRMDLYGATVEDFAQVKVKNARHGLD 178 (399)
T ss_pred HHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 98499878999403357876544554556677114443014785088999999999999797999999999999987710
Q ss_pred CC----------------------CC---CCCCCCCEEEEEECCCCCCCCC-----CCEEEEEEEC-CCCCCEEEEECCC
Q ss_conf 24----------------------43---4325442001122057654445-----3113553213-6776527830698
Q gi|254780489|r 152 DK----------------------DT---AIIFGDAAGAVVLAPSPLKDKS-----GILGIELTSD-GSKYDLIKIPTGG 200 (325)
Q Consensus 152 d~----------------------~~---~~lfGDgA~A~il~~~~~~~~~-----~il~~~~~s~-~~~~~~~~~~~~~ 200 (325)
++ .. .-..+|||+|+||..++...+. .+....-... ...+.
T Consensus 179 NP~A~~r~~it~edvl~s~~Ia~PL~l~dc~~~sDGAaAvVl~s~e~A~~~~~~~~~~~~i~~~~~~~~~~~-------- 250 (399)
T PRK06059 179 NPNARYRKEVSVEDVLASPVVSDPLRLLDICATSDGAAALIVASKSFAEKHLGSVAGVPSVRAISTVTPQYP-------- 250 (399)
T ss_pred CCHHHCCCCCCHHHHCCCCHHHHCCCCCCCCCCCCCEEEEEEECHHHHHHHCCCCCCCEEEEEEEEECCCCC--------
T ss_conf 928666899887887238264526155131788885089999559999872235678839999984057544--------
Q ss_pred CCCCCCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHH------
Q ss_conf 667654455-6552322451454343201003678988997401200122463056541389999997197865------
Q gi|254780489|r 201 STSPAGTNT-HDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKR------ 273 (325)
Q Consensus 201 ~~~~~~~~~-~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~------ 273 (325)
...+...+. .+......-....| -....+++++++|++++|||.+-+|-.-..+.-...|.||+-+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~a~~ay~~AGi~p~DiDvae~yD~ft~~~l~~lE~lGf~~~Ge~~~~ 324 (399)
T PRK06059 251 QHLPELPDIATDSTAAVPAPERVF------KDQILDAAYAEAGIGPEDLSLAEVYDLSTALELDWYEHLGLCPKGEAEAL 324 (399)
T ss_pred CCCCCCCCCCCCCHHCCCCHHHHH------HHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHHHHHHCCCCCCCCHHHH
T ss_conf 333233321222101023315567------89999999998299978872775316660989999998499789837999
Q ss_pred ----------HHHHH----HHHCCCCCCCHHHHHHHHHHHH--CC----CCCCCEEEEEEECCCCCCCC
Q ss_conf ----------70021----8540933000599999999980--67----89998999998615510201
Q gi|254780489|r 274 ----------IMVNS----LKDFGNSSSASIPLSLSLENQR--KP----FQKGEKILTISCRRGNDRGI 322 (325)
Q Consensus 274 ----------~~~~~----l~~~GN~~sAsi~~~L~~~~~~--g~----i~~Gd~vll~~~G~G~s~ga 322 (325)
+++.| +.-.||...++=...+.++..+ |+ =-+|-++.|+.-+.|+..+.
T Consensus 325 v~~G~~~~~G~lPvNtsGGlls~Ghp~gatG~~~~~E~~~QLrG~Ag~rQV~~a~~gl~~n~G~~~~~~ 393 (399)
T PRK06059 325 LRSGATTLGGRIPVNPSGGLACFGEAIPAQAIAQVCELTWQLRGQATGRQVEGAKVGITANQGLFGHGS 393 (399)
T ss_pred HHCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCE
T ss_conf 977996679970355886021189966157999999999997488767738986178874778877732
No 36
>PRK08256 lipid-transfer protein; Provisional
Probab=99.62 E-value=3.8e-14 Score=112.35 Aligned_cols=197 Identities=19% Similarity=0.235 Sum_probs=128.3
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 98879999999999986430132223442588431002368874322112100238633342101231012567657887
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYI 129 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i 129 (325)
.+.+..+|+.+|+++||++||++|+|||.++++.+.++... .......+|+...+++.|+.+|.+++.++..|...|
T Consensus 18 ~~~~~~~L~~eA~~~AL~dAGi~~~~ID~v~~G~~~~~~~~---~~~a~~~~g~~g~P~~tV~~~CaSG~~Ai~~Aa~~I 94 (391)
T PRK08256 18 ASWDYPDMAAEAGRAALADAGIDYDEVQQAYVGYVYGDSTS---GQRALYEVGMTGIPVVNVNNNCSTGSTALFLARQAV 94 (391)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCC---HHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf 99999999999999999982989899899989703687500---599999613369965888787616999999999999
Q ss_pred HCC-CCEEEEEEECCCCCCC-----------------------CC-----------------------------------
Q ss_conf 438-8505886201224444-----------------------62-----------------------------------
Q gi|254780489|r 130 NSH-QKPVLIIAANLLSRRI-----------------------NL----------------------------------- 150 (325)
Q Consensus 130 ~~g-~~~vLVv~~e~~S~~~-----------------------d~----------------------------------- 150 (325)
++| .+.+|+++.|.+|+.- ++
T Consensus 95 ~sG~advvla~G~E~Ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~g~t~e~~A~vav~~ 174 (391)
T PRK08256 95 ASGAADCALALGFEQMQPGALGSVWDDRPSPLERHDKALAELVGFDGFPPALRMFGGAGREHMQKYGTTAETFAKIGAKA 174 (391)
T ss_pred HCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 76998889996440357666566658776711224566665304443638999999999999999786999859999997
Q ss_pred ------------CCCC-------C-----------CCCCCCCEEEEEECCCCCCCCCC------CEEEEEEECCCCCCEE
Q ss_conf ------------2244-------3-----------43254420011220576544453------1135532136776527
Q gi|254780489|r 151 ------------EDKD-------T-----------AIIFGDAAGAVVLAPSPLKDKSG------ILGIELTSDGSKYDLI 194 (325)
Q Consensus 151 ------------~d~~-------~-----------~~lfGDgA~A~il~~~~~~~~~~------il~~~~~s~~~~~~~~ 194 (325)
.++. + +-...|||+|+||..++...+.+ |++.-..++.
T Consensus 175 ~~~a~~np~A~~~~~~t~e~v~~s~~i~~plt~~~~s~~sDGAaAvvl~See~A~~~g~~~~v~I~g~a~~~~~------ 248 (391)
T PRK08256 175 RRHAANNPYAQFRDEVTLEDVLASPMIWGPLTRLQCCPPTCGAAAAILCSEEFARKHGLDRAVEIAAQAMTTDF------ 248 (391)
T ss_pred HHHHHHCCHHCCCCCCCHHHHHCCCCCCCHHHHHHCCCCCCCEEEEEEECHHHHHHCCCCCCEEEEEEEEECCC------
T ss_conf 89887196101378888999823485224025764589999718999956999986499987799999985267------
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHH
Q ss_conf 8306986676544556552322451454343201003678988997401200122463056541389999997197865
Q gi|254780489|r 195 KIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKR 273 (325)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~ 273 (325)
+........ +++. ......+.++++++++|++++|||.+-+|-+-...--...+.||+.++
T Consensus 249 ---------~~~~~~~~~-------~~~~--~~~~~~~Aa~~a~~~AGl~~~DiDv~Ei~daFa~~~l~~le~lG~~~~ 309 (391)
T PRK08256 249 ---------PSTFDGGDM-------INLV--GYDMTRAAAQQVYEQAGVGPEDIDVIELHDCFSANELLTYEALGLCPE 309 (391)
T ss_pred ---------CHHCCCCCC-------HHHC--CCCCHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHCCCCCC
T ss_conf ---------200147881-------4430--564069999999998499988876764215554889999998199988
No 37
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.61 E-value=1.7e-14 Score=114.69 Aligned_cols=98 Identities=18% Similarity=0.171 Sum_probs=84.3
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9887999999999998643013222344258843100236887432211210023-863334210123101256765788
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADSY 128 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~~ 128 (325)
.+.++.+|+..+++++|++++++|++||.|+++.+.+...-+..+..+....|++ .++++.|+..|++++.|+.+|.+.
T Consensus 22 ~~~~~~dL~~~a~~~~l~r~~l~~~~Id~vi~G~~~~~g~g~~~aR~~~l~aGlp~~vp~~tV~~~CaSGl~Ai~~A~~~ 101 (393)
T PRK08235 22 KDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTETINKVCASGLRAVTLADQI 101 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHH
T ss_conf 89989999999999999873989899998999935733545519999999769998886078825440547999999999
Q ss_pred HHCC-CCEEEEEEECCCCCC
Q ss_conf 7438-850588620122444
Q gi|254780489|r 129 INSH-QKPVLIIAANLLSRR 147 (325)
Q Consensus 129 i~~g-~~~vLVv~~e~~S~~ 147 (325)
|++| ...+|+++.|.+|+.
T Consensus 102 I~sG~~dv~lagGvEsmS~~ 121 (393)
T PRK08235 102 IRAGDASVIVAGGMESMSNA 121 (393)
T ss_pred HHCCCCCEEEEEEEEECCCC
T ss_conf 85898746688604654567
No 38
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.60 E-value=3.9e-14 Score=112.24 Aligned_cols=274 Identities=16% Similarity=0.186 Sum_probs=154.5
Q ss_pred CCCCCEEEEEEEEECCCCCCCHHHHHHHH--CCC-----HHHEE----EC-CC-CCEEE-----EECCC-----------
Q ss_conf 96662099999973588613888999880--999-----76831----11-47-50889-----94898-----------
Q gi|254780489|r 1 MIKSSSCILGFGHAVPNQCIHNSIIERHL--NLK-----LGVIE----QK-TG-IKYRY-----WAEKH----------- 51 (325)
Q Consensus 1 M~~~~~~I~g~g~~lP~~~i~n~~l~~~~--~~~-----~~~i~----~~-tG-I~~R~-----~~~~~----------- 51 (325)
|.+.++.|+|+|...|.- .+-+++-+.+ +.+ .++-. .+ .| ++... ..+++
T Consensus 1 m~~~rVaItGmg~~~P~g-~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~~~~~~~~~~~~fd~~~~i~~~~~~~~ 79 (424)
T PRK06333 1 MNKKRIVVTGMGVVSPLG-NGVETFWQRLLAGQSGIRTLTDFPCGDLATKIGGWVPELAEDAEAGFDPDPYLDPKDQRKM 79 (424)
T ss_pred CCCCCEEEECCEEECCCC-CCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHCCCHHHHHHC
T ss_conf 999989998768789898-9999999999819985754896645478774232736744454346795664899999862
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCCCC------CEEEEEEEEE-----------------CCCCCC---------CCCCCCC
Q ss_conf 8799999999999864301322234------4258843100-----------------236887---------4322112
Q gi|254780489|r 52 ETLTDIAIQAGDIALRNANIKKDSI------SLTLLATSTP-----------------DHLLPP---------SSPLITH 99 (325)
Q Consensus 52 e~~~~la~~Aa~~aL~~a~~~~~dI------d~ii~~s~t~-----------------d~~~P~---------~a~~v~~ 99 (325)
....-++.+|+++||++||++|+++ .+ ++++... +.+.|. .+.+|..
T Consensus 80 d~~~~~~l~aa~eAl~dAG~~~~~~~~~~r~gv-ivgs~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~ 158 (424)
T PRK06333 80 DRFITFAMAAAKEAIAQAGWDPDNLPDRERTAT-IIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSI 158 (424)
T ss_pred CHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEE-EEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 999999999999999975998246267765799-9962568568899999999754865448403456776689999999
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC-CEEEEEEECCC---------------CCCC--------C-CCCCC
Q ss_conf 1002386333421012310125676578874388-50588620122---------------4444--------6-22244
Q gi|254780489|r 100 RLGLMQSGAIDLTGACAGFLYALVMADSYINSHQ-KPVLIIAANLL---------------SRRI--------N-LEDKD 154 (325)
Q Consensus 100 ~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~g~-~~vLVv~~e~~---------------S~~~--------d-~~d~~ 154 (325)
.+|++. +++-+..+|++++.||..|.++|+.|. +.++|.++|.. |... . ++...
T Consensus 159 ~~gl~G-p~~tv~tACsSsl~Ai~~A~~~i~~G~~d~aivGg~~~~l~~~~~~~f~~~~~Ls~~~~~~p~~~~rPFD~~~ 237 (424)
T PRK06333 159 RYGFKG-PLGAPVTACAAGVQAIGDAARLIRSGEADVAICGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRAR 237 (424)
T ss_pred HHCCCC-CCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 819989-6215064607999999999999977870600035513322707789998766651278888543565112689
Q ss_pred CCCCCCCCEEEEEECCCCCCC--CCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHH
Q ss_conf 343254420011220576544--453113553213677652783069866765445565523224514543432010036
Q gi|254780489|r 155 TAIIFGDAAGAVVLAPSPLKD--KSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQ 232 (325)
Q Consensus 155 ~~~lfGDgA~A~il~~~~~~~--~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~ 232 (325)
..+++|+||+++||++.+... +..|...... .+...|..... . ...++ ....+
T Consensus 238 dG~v~gEGa~~~vLe~~~~A~~rg~~i~a~i~G-~g~~~d~~~~~-----~-----------~~~~~--------~~~~~ 292 (424)
T PRK06333 238 DGFVMGEGAGILVIETLEHALARGAPPLAELVG-YGTTADAYHIT-----S-----------GPEDG--------EGARR 292 (424)
T ss_pred CCCEECCCCCHHHCCCHHHHHHCCCCEEEEEEE-EEEECCCCCCC-----C-----------CCCCH--------HHHHH
T ss_conf 971407852123116687786589966899987-89857998888-----8-----------99883--------67799
Q ss_pred HHHHHHHHHCCCCCCCCEEEECCCCCHH-----HHHHHHHCCCCHHHHH-H-HHHHCCCCCCCHHHHHHHH---HHHHCC
Q ss_conf 7898899740120012246305654138-----9999997197865700-2-1854093300059999999---998067
Q gi|254780489|r 233 SAKQSLRKSDLQPQDINRFIPHQANSRI-----IQKVCEKIGLSKRIMV-N-SLKDFGNSSSASIPLSLSL---ENQRKP 302 (325)
Q Consensus 233 ~i~~~l~~~gl~~~did~~i~Hq~~~~~-----~~~~~~~lgi~~~~~~-~-~l~~~GN~~sAsi~~~L~~---~~~~g~ 302 (325)
+++++|+++|++++||||+-.|-.+-+. .+++.+.++-. .+.+ . +=..+||+-+|+=.+.+-. +++++.
T Consensus 293 ~m~~Al~~agi~~~~i~yI~aHgtgT~~gD~~E~~al~~~fg~~-~~~~i~S~K~~~GH~~~aaG~~~~i~~~l~l~~~~ 371 (424)
T PRK06333 293 AMEGALRQAGIPPEQVQHLNAHATSTPVGDLGEVAAIKKVFGHV-KGLAISSTKSATGHLLGAAGGVEAIFTILALRDQI 371 (424)
T ss_pred HHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCC-CCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999998499914518799527878666999999999985878-88864781110032578899999999999985498
Q ss_pred C
Q ss_conf 8
Q gi|254780489|r 303 F 303 (325)
Q Consensus 303 i 303 (325)
+
T Consensus 372 i 372 (424)
T PRK06333 372 A 372 (424)
T ss_pred C
T ss_conf 3
No 39
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.60 E-value=3.6e-14 Score=112.51 Aligned_cols=274 Identities=18% Similarity=0.221 Sum_probs=152.9
Q ss_pred CCEEEEEEEEECCCCCCCHHHHHHHHCCCHHHEE-----ECCCCCEEEEE--C---------CC-----CCHHHHHHHHH
Q ss_conf 6209999997358861388899988099976831-----11475088994--8---------98-----87999999999
Q gi|254780489|r 4 SSSCILGFGHAVPNQCIHNSIIERHLNLKLGVIE-----QKTGIKYRYWA--E---------KH-----ETLTDIAIQAG 62 (325)
Q Consensus 4 ~~~~I~g~g~~lP~~~i~n~~l~~~~~~~~~~i~-----~~tGI~~R~~~--~---------~~-----e~~~~la~~Aa 62 (325)
.++.|+|+|...|.- .+-+++-+.+--....|. ...+...++-. + +. +...-|+.+++
T Consensus 1 ~rIaItG~g~~~P~g-~~~~~fw~~L~~g~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~i~~~~~~~~dp~~rl~l~aa 79 (406)
T cd00834 1 RRVVITGLGAVTPLG-NGVEEFWEALLAGRSGIRPITRFDASGFPSRIAGEVPDFDPEDYLDRKELRRMDRFAQFALAAA 79 (406)
T ss_pred CEEEEEECEEECCCC-CCHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEECCCCCHHHCCCHHHHHHCCHHHHHHHHHH
T ss_conf 909999577889797-9999999999749987744883334258885536658888011589999985599999999999
Q ss_pred HHHHHHCCCCCCCCCE----EEEEEEEEC---------------------CCCC-----CCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9986430132223442----588431002---------------------3688-----743221121002386333421
Q gi|254780489|r 63 DIALRNANIKKDSISL----TLLATSTPD---------------------HLLP-----PSSPLITHRLGLMQSGAIDLT 112 (325)
Q Consensus 63 ~~aL~~a~~~~~dId~----ii~~s~t~d---------------------~~~P-----~~a~~v~~~Lg~~~~~~~di~ 112 (325)
.+||++||+++++++- |+++++..+ +..| ..+.+|...||++. +++-++
T Consensus 80 ~~Al~dAgl~~~~~~~~~~gV~vGs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G-p~~tv~ 158 (406)
T cd00834 80 EEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLRG-PNYTVS 158 (406)
T ss_pred HHHHHHCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCHHHHHHHHHHCCCC-CCEEEC
T ss_conf 9999975998234486644799943777377799999999855866568112101131289999999849999-742033
Q ss_pred CCCCCCHHHHHHHHHHHHCCC-CEEEEEEECCCCC---------------CC-------C-CCCCCCCCCCCCCEEEEEE
Q ss_conf 012310125676578874388-5058862012244---------------44-------6-2224434325442001122
Q gi|254780489|r 113 GACAGFLYALVMADSYINSHQ-KPVLIIAANLLSR---------------RI-------N-LEDKDTAIIFGDAAGAVVL 168 (325)
Q Consensus 113 ~~C~g~l~aL~~A~~~i~~g~-~~vLVv~~e~~S~---------------~~-------d-~~d~~~~~lfGDgA~A~il 168 (325)
.+|++++.||..|..+|+.|. +.++|.+++.... .. . |......++.|+|++++||
T Consensus 159 taCsSsl~Al~~A~~~L~~G~~d~aivgg~~~~~~~~~~~~f~~~~~Ls~~~~~p~~~~rpFD~~adG~v~gEGa~~~vL 238 (406)
T cd00834 159 TACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDRDGFVLGEGAGVLVL 238 (406)
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCEEEEEC
T ss_conf 44167678899999999779542021100241278689999998888733899876665655567884001286558851
Q ss_pred CCCCCCCC--CCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCC
Q ss_conf 05765444--5311355321367765278306986676544556552322451454343201003678988997401200
Q gi|254780489|r 169 APSPLKDK--SGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQ 246 (325)
Q Consensus 169 ~~~~~~~~--~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~ 246 (325)
++.+...+ ..|....... +...|... ......++ ....++++++|+++|++++
T Consensus 239 ~~~~~A~~~g~~i~a~I~g~-~~~~dg~~----------------~~~~~p~~--------~~~~~~i~~al~~agi~~~ 293 (406)
T cd00834 239 ESLEHAKARGAKIYAEILGY-GASSDAYH----------------ITAPDPDG--------EGAARAMRAALADAGLSPE 293 (406)
T ss_pred CCHHHHHHCCCCEEEEEEEE-EEECCCCC----------------CCCCCCCH--------HHHHHHHHHHHHHHCCCCC
T ss_conf 45999986799168999889-99379988----------------88889898--------9999999999998589974
Q ss_pred CCCEEEECCCCCHH-----HHHHHHHCCCCHHHHH--HHHHHCCCCCCCHHHHHHHH---HHHHCCCC
Q ss_conf 12246305654138-----9999997197865700--21854093300059999999---99806789
Q gi|254780489|r 247 DINRFIPHQANSRI-----IQKVCEKIGLSKRIMV--NSLKDFGNSSSASIPLSLSL---ENQRKPFQ 304 (325)
Q Consensus 247 did~~i~Hq~~~~~-----~~~~~~~lgi~~~~~~--~~l~~~GN~~sAsi~~~L~~---~~~~g~i~ 304 (325)
||||+-.|-.+-.. .+++.+.++=..++.+ .+=..+||+-+|+=.+.|-. +++++.+.
T Consensus 294 ~I~yIe~HgtGt~~gD~~E~~ai~~~f~~~~~~~~i~s~K~~iGH~~~asG~~~li~~~~~l~~~~ip 361 (406)
T cd00834 294 DIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLALRDGVLP 361 (406)
T ss_pred CCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEECCHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 45289970487867799999999998556789866888211001188999999999999998559658
No 40
>PRK06364 consensus
Probab=99.59 E-value=5.9e-14 Score=111.07 Aligned_cols=202 Identities=18% Similarity=0.220 Sum_probs=130.5
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCC--CCCCCCCCCCCCCCC--CCCCCCCCCCCCCCHHHHHHH
Q ss_conf 9887999999999998643013222344258843100236--887432211210023--863334210123101256765
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHL--LPPSSPLITHRLGLM--QSGAIDLTGACAGFLYALVMA 125 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~--~P~~a~~v~~~Lg~~--~~~~~di~~~C~g~l~aL~~A 125 (325)
++.+..+|+.+|+++||++||++++|||.++.+...+... ....+..++..+|++ +.+++-++.+|.++..|+..|
T Consensus 21 ~~~s~~~L~~eA~~~Al~dAgl~~~dID~v~~~~~~~g~~~~~~~~~~~~a~~~gl~~~~vp~~~V~~~caSG~~Ai~~A 100 (389)
T PRK06364 21 WDKSLRDLAVEAGLEAIKDANIYSKDLQMLYASNSLAGTINEQSNIAALAADFSGIAEEHVPAVRVEASTASGGAAVREA 100 (389)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHH
T ss_conf 99798999999999999880989899899988156665556524399999997599855886699887017899999999
Q ss_pred HHHHHCC-CCEEEEEEECCCCCCC------------C--CC---------------------------------------
Q ss_conf 7887438-8505886201224444------------6--22---------------------------------------
Q gi|254780489|r 126 DSYINSH-QKPVLIIAANLLSRRI------------N--LE--------------------------------------- 151 (325)
Q Consensus 126 ~~~i~~g-~~~vLVv~~e~~S~~~------------d--~~--------------------------------------- 151 (325)
...|++| .+.+|+++.|.+|... | |.
T Consensus 101 ~~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~y~~~~g~~~e~~a~va~~~~~~ 180 (389)
T PRK06364 101 YLAIKSGEYDVVMVGGVEKMTDIYGHEIIDVQSSILDREWESFNGATPAAMAAIIARRYMHDFNVEREAISMIAVNDHAN 180 (389)
T ss_pred HHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 99997297778999610003567776544445433330023303548999999999999999696999999999976563
Q ss_pred ----------CC---------------C---CCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCC
Q ss_conf ----------24---------------4---3432544200112205765444531135532136776527830698667
Q gi|254780489|r 152 ----------DK---------------D---TAIIFGDAAGAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTS 203 (325)
Q Consensus 152 ----------d~---------------~---~~~lfGDgA~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~ 203 (325)
++ . .+-...|||+|+||..++...+.+.....+...+..++
T Consensus 181 A~~nP~A~~r~~~t~e~vl~s~~i~~Pl~~~d~s~~~DGAaAvVl~s~e~a~~~~~~~v~i~~~~~~~~----------- 249 (389)
T PRK06364 181 ASRNPDAQYRNKITVKQVMNSDPVAEPLNVFDCSPISDGASAIILASEDFVKKNRKDGVRILSSAMAED----------- 249 (389)
T ss_pred HHHCCCCCCCCCCCHHHHHCCCCCCCCCCHHHCCCCCCCEEEEEEECHHHHHHCCCCCEEEEEEEEECC-----------
T ss_conf 761960111577678886236876787607445778883179999338999756899759999999624-----------
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHH
Q ss_conf 6544556552322451454343201003678988997401200122463056541389999997197865
Q gi|254780489|r 204 PAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKR 273 (325)
Q Consensus 204 ~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~ 273 (325)
+....... .++ .........+++++++|++++|||.+-.|-+-...--.+.+.||+.++
T Consensus 250 ~~~~~~~~---------~~~--~~~~~~~A~~~A~~~AGl~~~DIDl~Ei~DaFa~~~l~~le~lG~~~~ 308 (389)
T PRK06364 250 YLALHSRK---------SIY--TLESTKIAARLALDRAGIKSDDVSFLELNDSYSIYGLLELEDLGFAEK 308 (389)
T ss_pred CCCCCCCC---------CCC--CCCCHHHHHHHHHHHHCCCHHHCCEEEECCCCHHHHHHHHHHCCCCCC
T ss_conf 55557778---------654--454089999999998199978861775226554999999998099987
No 41
>TIGR02845 spore_V_AD stage V sporulation protein AD; InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation ..
Probab=99.58 E-value=1.4e-14 Score=115.09 Aligned_cols=259 Identities=21% Similarity=0.301 Sum_probs=167.1
Q ss_pred CCCEEEEEEEEECCCC----CCCHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCHHHHH-----HHHHHHHHHHCCCCC
Q ss_conf 6620999999735886----1388899988099976831114750889948988799999-----999999864301322
Q gi|254780489|r 3 KSSSCILGFGHAVPNQ----CIHNSIIERHLNLKLGVIEQKTGIKYRYWAEKHETLTDIA-----IQAGDIALRNANIKK 73 (325)
Q Consensus 3 ~~~~~I~g~g~~lP~~----~i~n~~l~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~la-----~~Aa~~aL~~a~~~~ 73 (325)
.+.++|.|.|+..=|. |+.. .|+. +..- - | -+|.+.||| .+|++.||+|+|++.
T Consensus 7 ~~pp~I~s~gt~vGP~Eg~GPL~~-----~FD~----~~~d-----l-~--~ge~SwEkAEr~lm~~Av~~aL~Ka~l~~ 69 (331)
T TIGR02845 7 ENPPVIVSAGTAVGPKEGEGPLGD-----YFDK----IYDD-----L-Y--CGEDSWEKAERKLMEDAVNLALKKANLKK 69 (331)
T ss_pred CCCCEEEEEEEEEECCCCCCCCCC-----CCCC----EECC-----C-C--CCCCCHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 488789986578506347896862-----1252----2014-----4-3--57201899999999999999875358712
Q ss_pred C--CCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCEEEEEEECCCC---CC
Q ss_conf 2--3442588431002368874322112100238633342101231012567657887438-8505886201224---44
Q gi|254780489|r 74 D--SISLTLLATSTPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYINSH-QKPVLIIAANLLS---RR 147 (325)
Q Consensus 74 ~--dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~g-~~~vLVv~~e~~S---~~ 147 (325)
+ |||+++ +.-.-.+.. +++++++.||+|- |.+=+||+.++.+|-++..++.+| ++++|.-.|-.++ |.
T Consensus 70 ~PP~vD~~L-AGDLLNQ~~--~anFvAR~L~iPf---lGLygACsTs~E~L~~gA~lv~GGfAd~vLaAtSSHy~taERQ 143 (331)
T TIGR02845 70 DPPDVDFFL-AGDLLNQII--TANFVARELGIPF---LGLYGACSTSMETLALGAMLVDGGFADRVLAATSSHYATAERQ 143 (331)
T ss_pred CCCCEEEEE-HHHHHHHHH--HHHHHHHHCCCCC---EECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHH
T ss_conf 787211120-103666789--9989887458882---3402135789999999999983200221111211113532210
Q ss_pred CC-CCC-----CCC--C-CCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 46-222-----443--4-32544200112205765444531135532136776527830698667654455655232245
Q gi|254780489|r 148 IN-LED-----KDT--A-IIFGDAAGAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITN 218 (325)
Q Consensus 148 ~d-~~d-----~~~--~-~lfGDgA~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (325)
+. |+. +.+ + ++ ||+|+||++.+. +.+|-.. |.| ++.+.|-.+|.....-
T Consensus 144 FRYPTEyG~Qkp~tAq~TVT---GAGA~~l~~~~~--~~~it~a---T~G------kV~D~G~~dP~~mG~A-------- 201 (331)
T TIGR02845 144 FRYPTEYGVQKPPTAQWTVT---GAGAVLLASTGG--GPRITSA---TIG------KVVDLGLTDPLDMGAA-------- 201 (331)
T ss_pred CCCCCCCCCCCCCCCCCCEE---HHHEEEECCCCC--CCEEEEE---EEE------EEEECCCCCCCCHHHH--------
T ss_conf 25651256115998861250---346486544789--4364145---301------4771233686411354--------
Q ss_pred CHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECC---CCCHHHHHHHHHC-CCCHHHHHHHHHHC------------
Q ss_conf 1454343201003678988997401200122463056---5413899999971-97865700218540------------
Q gi|254780489|r 219 GADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFIPHQ---ANSRIIQKVCEKI-GLSKRIMVNSLKDF------------ 282 (325)
Q Consensus 219 g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i~Hq---~~~~~~~~~~~~l-gi~~~~~~~~l~~~------------ 282 (325)
..+.-.+.|+..|+++|.+++|.|.++.=- .+..|.+.+.++= |++..+ ++++|
T Consensus 202 -------MAPAAaDTI~~Hf~dtg~~~~DYDLIvTGDL~rvG~~I~~~LL~e~yg~~~~~---~Y~DCG~~IY~~dqqdV 271 (331)
T TIGR02845 202 -------MAPAAADTIEAHFKDTGRSVDDYDLIVTGDLARVGSEILRKLLKEEYGYDVTE---KYDDCGVMIYRPDQQDV 271 (331)
T ss_pred -------HHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCC---EECCCCEEEECCCCCCC
T ss_conf -------12689999999998707880401367873300214899999988860875000---10456467533887810
Q ss_pred -----CCCCCCHHHHH-HHHHHHHCCCCCCCEEEEEEECCCCC
Q ss_conf -----93300059999-99999806789998999998615510
Q gi|254780489|r 283 -----GNSSSASIPLS-LSLENQRKPFQKGEKILTISCRRGND 319 (325)
Q Consensus 283 -----GN~~sAsi~~~-L~~~~~~g~i~~Gd~vll~~~G~G~s 319 (325)
|--.||.+-.. |-.-+.+|+|| |||+++.|+=+|
T Consensus 272 ~AGGSG~ACSAvV~yGyll~~l~~G~l~---k~LvvaTGALLS 311 (331)
T TIGR02845 272 FAGGSGCACSAVVTYGYLLKELKRGKLK---KVLVVATGALLS 311 (331)
T ss_pred CCCCCCCCHHHEEHHHHHHHHHHCCCCE---EEEEEECCHHHH
T ss_conf 5778566503321137899998369712---788885103322
No 42
>PRK07800 consensus
Probab=99.58 E-value=4.8e-14 Score=111.68 Aligned_cols=98 Identities=16% Similarity=0.171 Sum_probs=84.3
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9887999999999998643013222344258843100236887432211210023-863334210123101256765788
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADSY 128 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~~ 128 (325)
.+.++.+|+..+++++|++++++|++||.||++...+...-+..+..+.-+.|++ .++++.|+..|.+++.|+.+|...
T Consensus 22 ~~~~~~~L~~~~i~~~l~~~gl~p~~Id~vi~G~v~~~g~g~n~aR~~~l~aglp~~vp~~tV~~~CaSGl~Ai~~A~~~ 101 (393)
T PRK07800 22 KDFSASDLGGIAIKAALEKAGVAADQVDYVIMGQVLQAGAGQIPARQAAVAAGIPMDVPALTINKVCLSGLDAIALADQL 101 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHH
T ss_conf 99988999999999999974999899898999924766766509999999769898885699945013799999999999
Q ss_pred HHCC-CCEEEEEEECCCCCC
Q ss_conf 7438-850588620122444
Q gi|254780489|r 129 INSH-QKPVLIIAANLLSRR 147 (325)
Q Consensus 129 i~~g-~~~vLVv~~e~~S~~ 147 (325)
|++| .+-+|+++.|.+|+.
T Consensus 102 I~~G~~dvvlagGvEsmS~~ 121 (393)
T PRK07800 102 IRAGEFDVVVAGGQESMTQA 121 (393)
T ss_pred HHCCCCCEEEEEEEECCCCC
T ss_conf 86799866789852024547
No 43
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=99.58 E-value=1.2e-13 Score=108.96 Aligned_cols=96 Identities=23% Similarity=0.264 Sum_probs=73.7
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCC--CCCCC-CCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 9887999999999998643013222344258843100236887--43221-12100238633342101231012567657
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPP--SSPLI-THRLGLMQSGAIDLTGACAGFLYALVMAD 126 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~--~a~~v-~~~Lg~~~~~~~di~~~C~g~l~aL~~A~ 126 (325)
++.+..+|+.+|+++||+++|++|+|||-|++++..+.+ .|. .+..+ ....++...++..++.+|.+++.++..|.
T Consensus 18 ~~~s~~~L~~~A~~~Al~dAgl~~~dID~v~~G~~~~g~-~~~~~~~~~~~~~~~~l~~~p~~~v~~~caSG~~ai~~Aa 96 (389)
T PRK07516 18 DAETLESLIVRVAREALADAGIAAGDVDGIFLGHFNAGF-SPQDFTASLVLQADPALRFKPATRVENACATGSAAVYAAI 96 (389)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCC-CCCHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHH
T ss_conf 998999999999999999969098993999998247444-6432999999973675568755998787679999999999
Q ss_pred HHHHCC-CCEEEEEEECCCCC
Q ss_conf 887438-85058862012244
Q gi|254780489|r 127 SYINSH-QKPVLIIAANLLSR 146 (325)
Q Consensus 127 ~~i~~g-~~~vLVv~~e~~S~ 146 (325)
..|++| .+.+|+++.|.+|+
T Consensus 97 ~~I~sG~~dvvl~~G~e~ms~ 117 (389)
T PRK07516 97 DAIESGRARIVLVVGAEKMTA 117 (389)
T ss_pred HHHHCCCCCEEEEEEECCCCC
T ss_conf 999759888999998710467
No 44
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=99.57 E-value=3.2e-13 Score=106.25 Aligned_cols=229 Identities=17% Similarity=0.100 Sum_probs=141.9
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 98879999999999986430132223442588431002368874322112100238633342101231012567657887
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYI 129 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i 129 (325)
++.+..+|+.+|+++||++||++++|||.+++++..++......+..+...||+.+.+...+..+|+++..++..|...|
T Consensus 23 ~~~s~~~L~~eA~~~AL~DAGl~~~dID~~~~g~~~~~~~~~~~~~~l~~~lg~~~~p~~~v~~~~asG~~al~~A~~aI 102 (400)
T PRK06157 23 WDAGGEDLMVEAYQEAIADAGIEPKQIEAAWFGTHYDEIGTGKSGTPLSMALRLPNIPVTRVENFCATGTEAFRGAVYAV 102 (400)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf 99799999999999999973999899899989814775445525799999618998733786477449999999999999
Q ss_pred HCC-CCEEEEEEECCCCCC---------------------------------------CCCCC-----------------
Q ss_conf 438-850588620122444---------------------------------------46222-----------------
Q gi|254780489|r 130 NSH-QKPVLIIAANLLSRR---------------------------------------INLED----------------- 152 (325)
Q Consensus 130 ~~g-~~~vLVv~~e~~S~~---------------------------------------~d~~d----------------- 152 (325)
++| .+.+||++.|.++.. .++++
T Consensus 103 ~sG~~d~vlv~g~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~A~~a~~ym~~yG~t~e~l~~~~A~VAvk~r~nA~ 182 (400)
T PRK06157 103 ASGAYDIALALGVEKLKDTGYGGLPVASRGTLAPMWMPNGSAPGNFAQLASAYRAKHGVSREDLKRAMAHVSVKSHANGA 182 (400)
T ss_pred HCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 80988789996454256775344754345630344302587389999999999999797987899999999999999986
Q ss_pred ---------CC-------C-----------CCCCCCCEEEEEECCCCCCCCC---CCEEEEEEECCCCCCEEEEECCCCC
Q ss_conf ---------44-------3-----------4325442001122057654445---3113553213677652783069866
Q gi|254780489|r 153 ---------KD-------T-----------AIIFGDAAGAVVLAPSPLKDKS---GILGIELTSDGSKYDLIKIPTGGST 202 (325)
Q Consensus 153 ---------~~-------~-----------~~lfGDgA~A~il~~~~~~~~~---~il~~~~~s~~~~~~~~~~~~~~~~ 202 (325)
+. + .-..+|||+|+||..++...+. ......-..... ...
T Consensus 183 ~NP~A~~r~~iT~edvl~s~~Ia~PL~llDc~~~sDGAaAvVv~S~e~Ar~l~~~~~v~i~~~~~~~----------~~~ 252 (400)
T PRK06157 183 RNPKAHLRKAVTEEQVLNAPMVAYPLGLFDCCGVSDGAACAIVTTPEIARALGKKDLVTVKALQLAV----------SNG 252 (400)
T ss_pred HCCCCCCCCCCCHHHHCCCCCCCCCCCHHHCCCCCCEEEEEEEECHHHHHHCCCCCCEEEEEEEEEC----------CCC
T ss_conf 0974125699887887128867688948875887780599999569999860789967999999862----------688
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCC--CCCCEEEECCCCCHHHHHHHHHCCCCHH----H--
Q ss_conf 7654455655232245145434320100367898899740120--0122463056541389999997197865----7--
Q gi|254780489|r 203 SPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQP--QDINRFIPHQANSRIIQKVCEKIGLSKR----I-- 274 (325)
Q Consensus 203 ~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~--~did~~i~Hq~~~~~~~~~~~~lgi~~~----~-- 274 (325)
.+......+.. ......+..+++++++|+++ +|||.+-+|-.-...--...+.||+-+. +
T Consensus 253 ~~~~~~~~~~~------------~~~~~~~aa~~a~~~AGi~~p~~DiDv~elyD~Ft~~~l~~lE~lGfc~~Ge~~~~~ 320 (400)
T PRK06157 253 WESQYNGWDGS------------YFHTTRVAAKKAYAEAGIEDPRKELSLMEVHDCFSITELVTMEDLGLSEPGQAWRDV 320 (400)
T ss_pred CCCCCCCCCCC------------CCHHHHHHHHHHHHHHCCCCCHHHCEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHH
T ss_conf 74346655433------------348899999999998079997666608886166628999999981998888279999
Q ss_pred ----------HHHH----HHHCCCCCCCHHHHHHHHHHHH
Q ss_conf ----------0021----8540933000599999999980
Q gi|254780489|r 275 ----------MVNS----LKDFGNSSSASIPLSLSLENQR 300 (325)
Q Consensus 275 ----------~~~~----l~~~GN~~sAsi~~~L~~~~~~ 300 (325)
++.| +--.||...++=...+.++..+
T Consensus 321 ~~G~~~~~G~lPvNtsGGlls~Ghp~gatG~~~~~E~~~Q 360 (400)
T PRK06157 321 LDGFFDADGGVPCQIDGGLKCFGHPIGASGLRMLYEMYLQ 360 (400)
T ss_pred HCCCCCCCCCEEECCCCCHHHCCCCCCCHHHHHHHHHHHH
T ss_conf 7798357997306688505307986740099999999999
No 45
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=99.57 E-value=2.1e-13 Score=107.43 Aligned_cols=101 Identities=19% Similarity=0.196 Sum_probs=76.5
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCC--CCCCCCC-CCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 89948988799999999999864301322234425884310023688--7432211-21002386333421012310125
Q gi|254780489|r 45 RYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLP--PSSPLIT-HRLGLMQSGAIDLTGACAGFLYA 121 (325)
Q Consensus 45 R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P--~~a~~v~-~~Lg~~~~~~~di~~~C~g~l~a 121 (325)
|++..++.+..+|+.+|+++||+++|++|+|||.+++++..++.... ....... ...++...+++-++.+|.++..|
T Consensus 17 r~~~~~~~~~~~L~~eA~~~Al~dAGl~~~dID~v~~G~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~v~~~caSG~~A 96 (408)
T PRK06289 17 RNWTKEGRDFADLTREVVDGTLAAAGIDADDIGVVHVGNFFGELFAGQGHLGAMPATVHPALWGTPASRHEAACASGSVA 96 (408)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCHHHHHH
T ss_conf 78887899999999999999999849998998999997415643445102566788764212588614463523899999
Q ss_pred HHHHHHHHHCC-CCEEEEEEECCCC
Q ss_conf 67657887438-8505886201224
Q gi|254780489|r 122 LVMADSYINSH-QKPVLIIAANLLS 145 (325)
Q Consensus 122 L~~A~~~i~~g-~~~vLVv~~e~~S 145 (325)
+..|...|++| .+.+|+++.|.+|
T Consensus 97 ~~~A~~~I~sG~~dvvla~G~e~ms 121 (408)
T PRK06289 97 TLAAIADLRSGAYDVALVVGLELEK 121 (408)
T ss_pred HHHHHHHHHCCCCCEEEEEEEEECC
T ss_conf 9999999974888779998888626
No 46
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.57 E-value=1.3e-13 Score=108.91 Aligned_cols=274 Identities=16% Similarity=0.209 Sum_probs=150.0
Q ss_pred CCCEEEEEEEEECCCCCCCHHHHHHHH-C-CC-HHHEE--ECCCCCEEEE-----------ECCC-----CCHHHHHHHH
Q ss_conf 662099999973588613888999880-9-99-76831--1147508899-----------4898-----8799999999
Q gi|254780489|r 3 KSSSCILGFGHAVPNQCIHNSIIERHL-N-LK-LGVIE--QKTGIKYRYW-----------AEKH-----ETLTDIAIQA 61 (325)
Q Consensus 3 ~~~~~I~g~g~~lP~~~i~n~~l~~~~-~-~~-~~~i~--~~tGI~~R~~-----------~~~~-----e~~~~la~~A 61 (325)
++++.|+|+|...|.-. +-+++-+.+ . .+ ...+. .......++- ..+. ....-|+..+
T Consensus 1 ~rRVvItG~g~v~P~g~-~~e~fw~~L~~G~s~i~~~~~~d~~~~~~~~~g~i~~f~~~~~i~~~~~r~~d~~~~~~l~a 79 (411)
T PRK07314 1 KRRVVVTGLGAVSPLGN-DVESTWKNLLAGKSGIGPITKFDTSDLAVKIAGEVKDFNPDDYMSRKEARRMDRFIQYGIAA 79 (411)
T ss_pred CCCEEEECCEEECCCCC-CHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECCCCCHHHCCCHHHHHHCCHHHHHHHHH
T ss_conf 99699981678898989-99999999980998365478666546876366781898957758999998559999999999
Q ss_pred HHHHHHHCCCCCCCCC----EEEEEEEEE-----------------CC----CCCC-----CCCCCCCCCCCCCCCCCCC
Q ss_conf 9998643013222344----258843100-----------------23----6887-----4322112100238633342
Q gi|254780489|r 62 GDIALRNANIKKDSIS----LTLLATSTP-----------------DH----LLPP-----SSPLITHRLGLMQSGAIDL 111 (325)
Q Consensus 62 a~~aL~~a~~~~~dId----~ii~~s~t~-----------------d~----~~P~-----~a~~v~~~Lg~~~~~~~di 111 (325)
+++||++||+++++++ -|+.+|... +. ..|. .+.+|...+|++. +++-+
T Consensus 80 a~~Al~dAGl~~~~~~~~r~gv~vGt~~g~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l~G-p~~tv 158 (411)
T PRK07314 80 AKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLHEKGPRRVSPFFVPMAIINMAAGHVSIRYGAKG-PNHSI 158 (411)
T ss_pred HHHHHHHCCCCHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC-CCCCC
T ss_conf 99999973999468086556899814776257699999999844955458520256650289999999839999-73111
Q ss_pred CCCCCCCHHHHHHHHHHHHCCC-CEEEEEEECCC---------------CCC-------CCCCC-CCCCCCCCCCEEEEE
Q ss_conf 1012310125676578874388-50588620122---------------444-------46222-443432544200112
Q gi|254780489|r 112 TGACAGFLYALVMADSYINSHQ-KPVLIIAANLL---------------SRR-------INLED-KDTAIIFGDAAGAVV 167 (325)
Q Consensus 112 ~~~C~g~l~aL~~A~~~i~~g~-~~vLVv~~e~~---------------S~~-------~d~~d-~~~~~lfGDgA~A~i 167 (325)
+.+|++++.||..|..+|+.|. +.++|.++|.. |.. ..|-| ....+++|+||+++|
T Consensus 159 ~~aCsSsl~Al~~A~~~i~~G~~d~aivgg~~~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~adG~v~gEGa~~vv 238 (411)
T PRK07314 159 VTACATGAHAIGDAARLIQYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDRDGFVMGEGAGILV 238 (411)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 14013799999999999985997765414524567889999999988874078998777773213799732256147885
Q ss_pred ECCCCCCCC--CCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCC
Q ss_conf 205765444--531135532136776527830698667654455655232245145434320100367898899740120
Q gi|254780489|r 168 LAPSPLKDK--SGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQP 245 (325)
Q Consensus 168 l~~~~~~~~--~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~ 245 (325)
|++.+.... ..|...... .+...|...+ ..| ..++ ....++++++|+++|+++
T Consensus 239 Le~~~~A~~~g~~i~a~i~G-~~~~~d~~~~-----~~p-----------~~~~--------~g~~~a~~~al~~agi~~ 293 (411)
T PRK07314 239 LEELEHAKARGAKIYAEVVG-YGMTGDAYHM-----TAP-----------APDG--------EGAARAMVAALKDAGINP 293 (411)
T ss_pred ECCHHHHHHCCCCEEEEEEE-EEECCCCCCC-----CCC-----------CCCC--------HHHHHHHHHHHHHHCCCC
T ss_conf 26599998779946899831-3764799888-----788-----------9860--------567889999999858996
Q ss_pred CCCCEEEECCCCCHH-----HHHHHHHCCCCHHHHH-H-HHHHCCCCCCCHHHHHHHH---HHHHCCC
Q ss_conf 012246305654138-----9999997197865700-2-1854093300059999999---9980678
Q gi|254780489|r 246 QDINRFIPHQANSRI-----IQKVCEKIGLSKRIMV-N-SLKDFGNSSSASIPLSLSL---ENQRKPF 303 (325)
Q Consensus 246 ~did~~i~Hq~~~~~-----~~~~~~~lgi~~~~~~-~-~l~~~GN~~sAsi~~~L~~---~~~~g~i 303 (325)
+||||+-.|-.+-.. .+++.+.++=...+.+ . +=..+||+-+|+=.+.+-. +++.+.+
T Consensus 294 ~~i~yIe~hgtgt~~~D~~E~~al~~~f~~~~~~~~i~S~K~~~GH~~~AsG~~~li~~~l~l~~~~i 361 (411)
T PRK07314 294 EDIDYINAHGTSTPAGDKAETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFTVLAIRDQVI 361 (411)
T ss_pred CCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 33217997368787779889999999865558898764803310336888999999999999855952
No 47
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.57 E-value=1.1e-13 Score=109.38 Aligned_cols=265 Identities=18% Similarity=0.190 Sum_probs=150.4
Q ss_pred CCCCCEEEEEEEEECCCCCCCHHHHHHHH-CCCHH--HEE--ECCCCCEEEEEC-CC---------------CCHHHHHH
Q ss_conf 96662099999973588613888999880-99976--831--114750889948-98---------------87999999
Q gi|254780489|r 1 MIKSSSCILGFGHAVPNQCIHNSIIERHL-NLKLG--VIE--QKTGIKYRYWAE-KH---------------ETLTDIAI 59 (325)
Q Consensus 1 M~~~~~~I~g~g~~lP~~~i~n~~l~~~~-~~~~~--~i~--~~tGI~~R~~~~-~~---------------e~~~~la~ 59 (325)
|.+..+.|+|+|.-.|.- .+-+++-+.+ .-..+ .+. ...+...|+... ++ .....++.
T Consensus 1 m~~rrVaItG~g~~~p~g-~~~e~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~fd~~~~~~~~~~~~~d~~~~~~l 79 (414)
T PRK08722 1 MSKRRVVVTGMGMLSPVG-NTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKDFNCEEYMSKKDARKMDLFIQYGI 79 (414)
T ss_pred CCCCCEEEECCEEECCCC-CCHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEECCCCCHHHCCCHHHHHHCCHHHHHHH
T ss_conf 999979998768689795-9999999999739983663784565579886657728889467589999986699999999
Q ss_pred HHHHHHHHHCCCCCCCCCE----EEEEEEEE-----------------CCC----CC-----CCCCCCCCCCCCCCCCCC
Q ss_conf 9999986430132223442----58843100-----------------236----88-----743221121002386333
Q gi|254780489|r 60 QAGDIALRNANIKKDSISL----TLLATSTP-----------------DHL----LP-----PSSPLITHRLGLMQSGAI 109 (325)
Q Consensus 60 ~Aa~~aL~~a~~~~~dId~----ii~~s~t~-----------------d~~----~P-----~~a~~v~~~Lg~~~~~~~ 109 (325)
+|+.+||+++|+++.+++. +++++... ... .| ..+.++...+|++. +++
T Consensus 80 ~aa~~Al~dAGl~~~~~~~~r~Gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~gl~G-p~~ 158 (414)
T PRK08722 80 AAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHKALVEKGPRKISPFFVPSTIVNMIAGHMSIMRGLRG-PNI 158 (414)
T ss_pred HHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC-CCC
T ss_conf 9999999962899432465644799940567177799999999854865458422224577899999999839989-872
Q ss_pred CCCCCCCCCHHHHHHHHHHHHCCC-CEEEEEEECCCCCC----------------------CCCCC-CCCCCCCCCCEEE
Q ss_conf 421012310125676578874388-50588620122444----------------------46222-4434325442001
Q gi|254780489|r 110 DLTGACAGFLYALVMADSYINSHQ-KPVLIIAANLLSRR----------------------INLED-KDTAIIFGDAAGA 165 (325)
Q Consensus 110 di~~~C~g~l~aL~~A~~~i~~g~-~~vLVv~~e~~S~~----------------------~d~~d-~~~~~lfGDgA~A 165 (325)
-++.+|++++.||..|.++|+.|. +.+++.++|..+.. ..|-| ....+.+|+||++
T Consensus 159 tv~tACsS~l~Ai~~A~~~I~~G~~d~aivGG~~~~~~p~~~~~f~~~~~ls~~~~~p~~~~rPFD~~rdG~v~gEGa~~ 238 (414)
T PRK08722 159 AISTACTTGLHNIGHAARMIAYGDADAMLAGGAEKASTPLGMGGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAGM 238 (414)
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCEE
T ss_conf 53554078999999999998679857443277322038288999886531202589965465665579998353064218
Q ss_pred EEECCCCCCCC--CCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCC
Q ss_conf 12205765444--5311355321367765278306986676544556552322451454343201003678988997401
Q gi|254780489|r 166 VVLAPSPLKDK--SGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDL 243 (325)
Q Consensus 166 ~il~~~~~~~~--~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl 243 (325)
+||++.+.... ..|.... ...+...|.... ..-..++. ....+++++|+++|+
T Consensus 239 ~vLe~~~~A~~rGa~i~a~i-~G~g~~~d~~~~----------------~~p~p~g~--------~~~~~m~~al~~agi 293 (414)
T PRK08722 239 MVLEEYEHAKARGAKIYAEL-VGFGMSGDAYHM----------------TSPSEDGS--------GGALAMEAAMRDAGI 293 (414)
T ss_pred EEEEEHHHHHHCCCCCEEEE-EEEEECCCCCCC----------------CCCCCCHH--------HHHHHHHHHHHHCCC
T ss_conf 98700888986799743999-878753688888----------------66797579--------999999999987499
Q ss_pred CCCCCCEEEECCCCCHH-----HHHHHHHCCCC-HHHHH-H-HHHHCCCCCCCHHHH
Q ss_conf 20012246305654138-----99999971978-65700-2-185409330005999
Q gi|254780489|r 244 QPQDINRFIPHQANSRI-----IQKVCEKIGLS-KRIMV-N-SLKDFGNSSSASIPL 292 (325)
Q Consensus 244 ~~~did~~i~Hq~~~~~-----~~~~~~~lgi~-~~~~~-~-~l~~~GN~~sAsi~~ 292 (325)
+++||||+-.|--+-.. .+++.+.++-. .++.+ . +=..+||+-+|+=.+
T Consensus 294 ~~~~I~yI~aHGTgT~~gD~~E~~ai~~~fg~~~~~~~~v~S~Ks~iGH~~~AaG~~ 350 (414)
T PRK08722 294 TGEQIGYVNAHGTSTPAGDVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSV 350 (414)
T ss_pred CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 987886698635878775999999999996635789752147003302237888999
No 48
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.56 E-value=1.2e-12 Score=102.60 Aligned_cols=221 Identities=19% Similarity=0.152 Sum_probs=139.9
Q ss_pred CCCCCEEEEEEEEECCCCCCCHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf 96662099999973588613888999880999768311147508899489887999999999998643013222344258
Q gi|254780489|r 1 MIKSSSCILGFGHAVPNQCIHNSIIERHLNLKLGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTL 80 (325)
Q Consensus 1 M~~~~~~I~g~g~~lP~~~i~n~~l~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii 80 (325)
|.++++.|+|+|..=. .+ + .++.+..+|+.+|+++||++||++++|||-++
T Consensus 1 m~~r~vAIvGvG~t~f------------~~-------~----------~~~~s~~~L~~eA~~~Al~DAGl~~~dID~~~ 51 (391)
T PRK08313 1 MAKRLAAVLGTGQTKY------------VA-------K----------RQDVSMAGLVREAIDRALADAGLTFDDIDAVV 51 (391)
T ss_pred CCCCCEEEEEEECCCC------------CC-------C----------CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEE
T ss_conf 9989889999865888------------88-------9----------99979999999999999997499989989999
Q ss_pred EEEEEECCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCEEEEEEECCCCCC----------
Q ss_conf 8431002368--874322112100238633342101231012567657887438-850588620122444----------
Q gi|254780489|r 81 LATSTPDHLL--PPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYINSH-QKPVLIIAANLLSRR---------- 147 (325)
Q Consensus 81 ~~s~t~d~~~--P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~g-~~~vLVv~~e~~S~~---------- 147 (325)
+++. ++... ......+.+.||+...+.+.+..+|+++..++..|...|++| .+.+||++.|..+..
T Consensus 52 ~g~~-~~~~~g~~~~~~~~~~~lG~~~~p~~~v~~~~asg~~a~~~A~~aI~sG~~d~vlv~g~ek~~~~~~~~~~~~~~ 130 (391)
T PRK08313 52 VGKA-PDFFEGVMMPELFLADAIGATGKPLIRVHTAGSVGGSTAVVAASLVQSGKYRRVLAVAWEKQSESNAMWALSIPV 130 (391)
T ss_pred EECC-CCCCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCC
T ss_conf 9765-764555435578999970787884378825317899999999999974887789998740357765421014787
Q ss_pred --------------------------------------------CCC----CCC-CC------------------CCCCC
Q ss_conf --------------------------------------------462----224-43------------------43254
Q gi|254780489|r 148 --------------------------------------------INL----EDK-DT------------------AIIFG 160 (325)
Q Consensus 148 --------------------------------------------~d~----~d~-~~------------------~~lfG 160 (325)
.|| .++ .+ .-...
T Consensus 131 ~~~~~~g~~~~~~~Al~a~rym~~yG~t~E~lA~Vav~~r~~A~~NP~A~~r~~~lt~edvl~s~~Ia~PL~l~dc~~~s 210 (391)
T PRK08313 131 PFTKPVGAGAGGYFAPHVRAYIRRSGAPTHIGAMVAVKDRLNGAKNPYAHLHQPDITLEKVMASQMLWDPIRFDETCPSS 210 (391)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCEEECCCCHHHCCCCC
T ss_conf 42032447669999999999999869899999999999998761197300058999888803686475687503018989
Q ss_pred CCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCC-CCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHH
Q ss_conf 4200112205765444531135532136776527830698667-654455655232245145434320100367898899
Q gi|254780489|r 161 DAAGAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTS-PAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLR 239 (325)
Q Consensus 161 DgA~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~ 239 (325)
|||+|+||..++...+...-. .....+.+.+... +.....++.. ......+..+++++
T Consensus 211 DGAaAvVl~s~e~a~~~~~~~---------~~~~~i~g~~~~~~~~~~~~~d~~------------~~~~~~~aa~~a~~ 269 (391)
T PRK08313 211 DGACAVVIGDEEAADARVAEG---------HPVAWIHGTALRTEPLAFAGRDQV------------NPQAGRDAAAALWK 269 (391)
T ss_pred CCCEEEEEECHHHHHHCCCCC---------CCEEEEEEEEEECCCCCCCCCCCC------------CCHHHHHHHHHHHH
T ss_conf 864799995399997524578---------972999999986588764556645------------50899999999999
Q ss_pred HHCCCC--CCCCEEEECCCCCHHHHHHHHHCCCCH
Q ss_conf 740120--012246305654138999999719786
Q gi|254780489|r 240 KSDLQP--QDINRFIPHQANSRIIQKVCEKIGLSK 272 (325)
Q Consensus 240 ~~gl~~--~did~~i~Hq~~~~~~~~~~~~lgi~~ 272 (325)
.+|+++ +|||.+-+|-.-..+.-...+.||+-+
T Consensus 270 ~Agi~~P~~DiDvaevyD~Ft~~~l~~lE~lGfc~ 304 (391)
T PRK08313 270 AAGITDPIDEIDVAEIYVPFSWFEPMWLENLGFAP 304 (391)
T ss_pred HCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCC
T ss_conf 75999951016478861564389999999839988
No 49
>PRK05790 acetyl-CoA acetyltransferase; Provisional
Probab=99.55 E-value=9.1e-14 Score=109.83 Aligned_cols=98 Identities=14% Similarity=0.162 Sum_probs=83.6
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9887999999999998643013222344258843100236887432211210023-863334210123101256765788
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADSY 128 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~~ 128 (325)
.+.++.+|+.++++++|++++++|++||.|+++.+.+...-+..+..+.-..|++ .++++.|+..|+++++|+..|...
T Consensus 22 ~~~~~~~L~~~ai~~~l~r~gi~~~~Id~vi~G~~~~~g~g~n~aR~~~l~aGlp~~vp~~tV~r~CaSG~~Ai~~A~~~ 101 (393)
T PRK05790 22 KDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAAIKAGLPVEVPALTINKVCGSGLKAVALAAQA 101 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHH
T ss_conf 88999999999999999982989899998999933656655549999999679998876489963115768999999998
Q ss_pred HHCC-CCEEEEEEECCCCCC
Q ss_conf 7438-850588620122444
Q gi|254780489|r 129 INSH-QKPVLIIAANLLSRR 147 (325)
Q Consensus 129 i~~g-~~~vLVv~~e~~S~~ 147 (325)
|++| ...+|+++.|.+|+.
T Consensus 102 I~sG~~dvvlagGvEsmS~~ 121 (393)
T PRK05790 102 IRAGDADIVVAGGQESMSQA 121 (393)
T ss_pred HHCCCCCEEEEECCCCCCCC
T ss_conf 74799768999544324567
No 50
>PRK06845 consensus
Probab=99.55 E-value=1.4e-13 Score=108.66 Aligned_cols=98 Identities=19% Similarity=0.208 Sum_probs=82.1
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCC-CCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 9887999999999998643013222344258843100236-887432211210023-86333421012310125676578
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHL-LPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADS 127 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~-~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~ 127 (325)
.+.++.+|+.+|++.+|++++++|++||-++++++.+... -+..+..+.-..|++ .++++.|+.+|++++.|+.+|..
T Consensus 22 ~~~~~~~L~~~a~~~al~~~gi~~~~Id~vi~G~~~~~g~~~~~~aR~~aL~aGlp~~vp~~tV~~~CaSG~~Ai~~A~~ 101 (392)
T PRK06845 22 KDLSATDLGVAAAKAALEQAGVSPEDIGHVVFGNVIQTGKDAIYLARHIGLKAGLPVGVPALTVNRLCGSGFEAIIQAAK 101 (392)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHH
T ss_conf 88999999999999999871979899798999815645654334999999976999888748884430388999999999
Q ss_pred HHHCC-CCEEEEEEECCCCCC
Q ss_conf 87438-850588620122444
Q gi|254780489|r 128 YINSH-QKPVLIIAANLLSRR 147 (325)
Q Consensus 128 ~i~~g-~~~vLVv~~e~~S~~ 147 (325)
.|++| .+-+|+++.|.+|+.
T Consensus 102 ~I~sG~~dvvlagGvEsmS~~ 122 (392)
T PRK06845 102 LIYLGEAEAVLAGGVESMSQA 122 (392)
T ss_pred HHHCCCCCEEEECCEECCCCC
T ss_conf 985799767886255205554
No 51
>PRK06363 consensus
Probab=99.55 E-value=1.4e-13 Score=108.64 Aligned_cols=200 Identities=20% Similarity=0.231 Sum_probs=128.6
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCC--CCCCCCCCCCCCCC--CCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 8879999999999986430132223442588431002368--87432211210023--8633342101231012567657
Q gi|254780489|r 51 HETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLL--PPSSPLITHRLGLM--QSGAIDLTGACAGFLYALVMAD 126 (325)
Q Consensus 51 ~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~--P~~a~~v~~~Lg~~--~~~~~di~~~C~g~l~aL~~A~ 126 (325)
+.+..+|+.+|++.||++++++|+|||-+++++.+.+... ...+..++..+|+. ..++..++.+|++++.++..|.
T Consensus 19 ~~s~~~L~~ea~~~Al~dAgl~~~dID~v~~g~~~~~~~~~~~~~~~~~a~~~Gl~~~~vp~~~v~~~C~SG~~Ai~~Aa 98 (387)
T PRK06363 19 ERSFRDLIVEAGIKAIEDANVSGEDIDAMYVGNMSGGRFVGQEHIGALIADYAGLNTLPIPATRVEAACASGGLALRQAV 98 (387)
T ss_pred CCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHH
T ss_conf 97989999999999999809798999999998257543446130999999973998887654888663179999999999
Q ss_pred HHHHCC-CCEEEEEEECCCCCCCCCC------------------------------------------------------
Q ss_conf 887438-8505886201224444622------------------------------------------------------
Q gi|254780489|r 127 SYINSH-QKPVLIIAANLLSRRINLE------------------------------------------------------ 151 (325)
Q Consensus 127 ~~i~~g-~~~vLVv~~e~~S~~~d~~------------------------------------------------------ 151 (325)
..|++| ++.+++.+.|.+|+.-+..
T Consensus 99 ~~I~sG~~dvvlagG~E~ms~~~~~~~~~~~~~d~~~~~~~g~~~~~~~a~~a~~~~~~yG~tre~~a~~A~~s~~~A~~ 178 (387)
T PRK06363 99 LAVASGYHDIVLAAGVEKMTDVGDATSALATAADREWEAFVGATFPSLYAMIAKRHMHEYGTTREQLAQVAVKNHENGAK 178 (387)
T ss_pred HHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
T ss_conf 99974998689996013677887655422224453520013775189999999999999796999999999981664542
Q ss_pred -------CCC------------------CCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCC
Q ss_conf -------244------------------3432544200112205765444531135532136776527830698667654
Q gi|254780489|r 152 -------DKD------------------TAIIFGDAAGAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSPAG 206 (325)
Q Consensus 152 -------d~~------------------~~~lfGDgA~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~ 206 (325)
++. .+-...|||+|+||..++...+.+.-.......+...+...
T Consensus 179 np~a~~~~~~t~d~~~~~~~i~~pl~~~d~s~~sDGAaAvvl~s~e~A~~~~~~pv~i~g~~~~~~~~~----------- 247 (387)
T PRK06363 179 NPYAQFRNEITVDQVLNSSMVADPLRLLDCSPVSDGAAAVIVCPAEKAREYTDTPIYIKASAQASDTIA----------- 247 (387)
T ss_pred CCCCCCCCCCCHHHHCCCCCCCCCCHHHHCCCCCCCCEEEEECCHHHHHHCCCCCEEEEEEEEEECCCC-----------
T ss_conf 850015787547552266656665315552466888348997159999865999579999999835544-----------
Q ss_pred CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCH
Q ss_conf 455655232245145434320100367898899740120012246305654138999999719786
Q gi|254780489|r 207 TNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSK 272 (325)
Q Consensus 207 ~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~ 272 (325)
.... +++. ........++++++++|++++|||.+=+|-+-...--...+.||+.+
T Consensus 248 ~~~~---------~~~~--~~~~~~~a~~~a~~~AGl~~~DiD~~Ei~eaFa~~~l~~~e~lGl~~ 302 (387)
T PRK06363 248 LHDR---------KDIT--TLDATVVASKKAYEMAGLTPKDIDVAEVHDCFTIAELCAIEDLGFCK 302 (387)
T ss_pred CCCC---------CCCC--CCCHHHHHHHHHHHHHCCCHHHCCEEEECCCCHHHHHHHHHHCCCCC
T ss_conf 5678---------8644--57716999999999849998887576411101688999999819985
No 52
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=99.54 E-value=7.2e-13 Score=103.99 Aligned_cols=227 Identities=19% Similarity=0.147 Sum_probs=141.0
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 988799999999999864301322234425884310023688--743221121002386333421012310125676578
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLP--PSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADS 127 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P--~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~ 127 (325)
++.+..+|+.+|+++||++||++++|||.+++++. |+.... -.+.++.+.+|....+...+..+|+++..++..|..
T Consensus 26 ~~~s~~eL~~eA~~~Al~DAGl~~~dID~~~~g~~-~~~~~g~~~~~~~~~~~~g~~~~p~~~v~~~~asg~~a~~~A~~ 104 (393)
T PRK06065 26 MLETPQELAWEAARQALDEAGLELKDIDCVVIGSA-PDAFDGVHMKGEYLAHGSGGIRKPVSRVFVGGATGVMVPIAGWY 104 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECC-CCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHH
T ss_conf 99999999999999999984999899899999556-76545432036899975477788447874452788999999999
Q ss_pred HHHCC-CCEEEEEEECCCCCC-----------CCC--C------------------------------------------
Q ss_conf 87438-850588620122444-----------462--2------------------------------------------
Q gi|254780489|r 128 YINSH-QKPVLIIAANLLSRR-----------INL--E------------------------------------------ 151 (325)
Q Consensus 128 ~i~~g-~~~vLVv~~e~~S~~-----------~d~--~------------------------------------------ 151 (325)
.|++| .+.+||++.|.++.. .|+ .
T Consensus 105 ~I~sG~~d~vlvvg~ek~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~Al~a~rym~~yG~t~E~lA~Vav~~r~~A~~ 184 (393)
T PRK06065 105 HVASGLCKKVLAVAEEKMSPARPHPQSVFRYIWDPILEKPLNPNLIWIFAMEMHRYMHVCGVKKEDIALVSVKNKRNALN 184 (393)
T ss_pred HHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 98678776899987404688876631466630350113667886799999999999998499999999999999998744
Q ss_pred C-------CC-------C-----------CCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCC
Q ss_conf 2-------44-------3-----------432544200112205765444531135532136776527830698667654
Q gi|254780489|r 152 D-------KD-------T-----------AIIFGDAAGAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSPAG 206 (325)
Q Consensus 152 d-------~~-------~-----------~~lfGDgA~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~ 206 (325)
+ +. + .-..+|||+|+||..++...+..--...+...+...+. ..
T Consensus 185 NP~A~~r~~~t~edvl~S~~Ia~PL~l~Dc~~~sDGAaAvVl~s~e~A~~l~~~pv~I~g~g~~~~~--------~~--- 253 (393)
T PRK06065 185 NPYAQLAANITVEDVLNSEVLVWPVQLLDVSPVSDGAAAMVLASEDVARRYTDTPVWVEGVGWTLDN--------TE--- 253 (393)
T ss_pred CCHHHCCCCCCHHHHCCCCCCHHCCCHHHCCCCCCCEEEEEEECHHHHHHCCCCCEEEEEEEEECCC--------CC---
T ss_conf 9296647999968860474122132425318878821899994489997568997899999974367--------66---
Q ss_pred CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCC--CCCCEEEECCCCCHHHHHHHHHCCCCHH----H------
Q ss_conf 455655232245145434320100367898899740120--0122463056541389999997197865----7------
Q gi|254780489|r 207 TNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQP--QDINRFIPHQANSRIIQKVCEKIGLSKR----I------ 274 (325)
Q Consensus 207 ~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~--~did~~i~Hq~~~~~~~~~~~~lgi~~~----~------ 274 (325)
...++.. .........+++.+.+|+++ +|||.+-.|-.-...--...+.||+-+. +
T Consensus 254 ~~~~d~~------------~~~~~~~aa~~Ay~~AGi~~p~~DiDv~evyD~Ft~~el~~lE~lGfc~~Ge~~~~v~~G~ 321 (393)
T PRK06065 254 WTNRDLA------------YPRYVEFAARMAYKMAGIERPRKEIDVAEPYDPFDYKELHHIEGLMLAKRGEAPKLLKEGV 321 (393)
T ss_pred CCCCCCC------------CCHHHHHHHHHHHHHCCCCCCHHCCCEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHCCC
T ss_conf 4545533------------2179999999999976999972007379850675088999999849998983799997799
Q ss_pred ------HHHH----HHHCCCCCCCHHHHHHHHHHHH
Q ss_conf ------0021----8540933000599999999980
Q gi|254780489|r 275 ------MVNS----LKDFGNSSSASIPLSLSLENQR 300 (325)
Q Consensus 275 ------~~~~----l~~~GN~~sAsi~~~L~~~~~~ 300 (325)
.+.| +--+||...|+=...+.++..+
T Consensus 322 ~~~~G~lPvNtsGGlls~Ghp~gatG~~~~~Ea~~Q 357 (393)
T PRK06065 322 FDRDGDIPSSPSGGLLGVGNPIAAAGLMKVISIYWQ 357 (393)
T ss_pred CCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHH
T ss_conf 567997135389710028885615699999999999
No 53
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.54 E-value=2.1e-13 Score=107.50 Aligned_cols=96 Identities=17% Similarity=0.128 Sum_probs=78.1
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 8879999999999986430132223442588431002368874322112-100238633342101231012567657887
Q gi|254780489|r 51 HETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITH-RLGLMQSGAIDLTGACAGFLYALVMADSYI 129 (325)
Q Consensus 51 ~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~-~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i 129 (325)
+..+.||+.+|++.||++++++|+|||.|+++...+.......+..+.- .++...++++.|+.+|.+++.|+..|...|
T Consensus 20 ~~~a~eL~~~ai~~al~~agi~~~~Id~vi~G~~~~~g~g~n~ar~~~l~ag~~~~vp~~tV~~~CaSG~~Ai~~A~~~I 99 (393)
T cd00826 20 NDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQEAPAIGMNNLCGSGLRALALAMQLI 99 (393)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf 89999999999999999829698998989999258755554199999997599989976887684789999999999999
Q ss_pred HCC-CCEEEEEEECCCCC
Q ss_conf 438-85058862012244
Q gi|254780489|r 130 NSH-QKPVLIIAANLLSR 146 (325)
Q Consensus 130 ~~g-~~~vLVv~~e~~S~ 146 (325)
++| .+.+|+++.|.+|.
T Consensus 100 ~sG~~dvvlagGvEsms~ 117 (393)
T cd00826 100 AGGDANCILAGGFEKMET 117 (393)
T ss_pred HCCCCCEEEEEEEEECCC
T ss_conf 769999899950550676
No 54
>PRK08768 consensus
Probab=99.53 E-value=3.2e-13 Score=106.28 Aligned_cols=274 Identities=16% Similarity=0.178 Sum_probs=151.7
Q ss_pred CCCCEEEEEEEEECCCCCCCHHHHHHHH--CCC-HHHEEE--CCCCCEE-----------EEECC-----CCCHHHHHHH
Q ss_conf 6662099999973588613888999880--999-768311--1475088-----------99489-----8879999999
Q gi|254780489|r 2 IKSSSCILGFGHAVPNQCIHNSIIERHL--NLK-LGVIEQ--KTGIKYR-----------YWAEK-----HETLTDIAIQ 60 (325)
Q Consensus 2 ~~~~~~I~g~g~~lP~~~i~n~~l~~~~--~~~-~~~i~~--~tGI~~R-----------~~~~~-----~e~~~~la~~ 60 (325)
|.+++.|+|+|...|.- .+-+++-+.+ |.+ ...+.+ ..+...+ .+..+ -+....++..
T Consensus 1 M~rrVvITGmG~vtp~G-~~~~~~w~~L~~G~s~i~~~~~~d~~~~~~~~~g~i~~fd~~~~~~~~~~~~~d~~~~~~l~ 79 (411)
T PRK08768 1 MSRRVVVTGMGMVSPLG-NDLATSWDGIVHGRSGIGPITQIDASQFTTKIAGEIKNFDPTLFVSAKDVKKMDSFIHYGVG 79 (411)
T ss_pred CCCCEEEECCEEECCCC-CCHHHHHHHHHCCCCCEECCCCCCCCCCCCCEEEECCCCCHHHCCCHHHHHHCCHHHHHHHH
T ss_conf 98989998767789796-99999999998089855407756631487776554588792554899999756999999999
Q ss_pred HHHHHHHHCCCCCCCC-----CEEEEEEEEEC-----------------CCCC---------CCCCCCCCCCCCCCCCCC
Q ss_conf 9999864301322234-----42588431002-----------------3688---------743221121002386333
Q gi|254780489|r 61 AGDIALRNANIKKDSI-----SLTLLATSTPD-----------------HLLP---------PSSPLITHRLGLMQSGAI 109 (325)
Q Consensus 61 Aa~~aL~~a~~~~~dI-----d~ii~~s~t~d-----------------~~~P---------~~a~~v~~~Lg~~~~~~~ 109 (325)
|+++||++||++++++ ++++ ++.+.. ...| ..+..|...+|++. +++
T Consensus 80 aa~~Al~dAGl~~~~~~~~r~Gv~v-Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~g~~G-p~~ 157 (411)
T PRK08768 80 ASFMALDDSGLEINESNAERVGAIL-GSGIGGLLGIEEQTIKFHEGGARKISPFYVPSTIINMLPGQVSLIKGLKG-PTF 157 (411)
T ss_pred HHHHHHHHHCCCHHHCCCCCEEEEE-ECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC-CCC
T ss_conf 9999977418990014765527999-22666530278999999856855468225566676689999999819989-762
Q ss_pred CCCCCCCCCHHHHHHHHHHHHCCC-CEEEEEEECCCCCC----------------------CCCCC-CCCCCCCCCCEEE
Q ss_conf 421012310125676578874388-50588620122444----------------------46222-4434325442001
Q gi|254780489|r 110 DLTGACAGFLYALVMADSYINSHQ-KPVLIIAANLLSRR----------------------INLED-KDTAIIFGDAAGA 165 (325)
Q Consensus 110 di~~~C~g~l~aL~~A~~~i~~g~-~~vLVv~~e~~S~~----------------------~d~~d-~~~~~lfGDgA~A 165 (325)
.+..+|++++.||..|.++|++|. +.+++.++|..... ..|-| +...+++|+||++
T Consensus 158 tv~taCaS~l~Al~~A~~~i~~G~~d~~ivgg~~~~~~p~~~~~f~~l~~ls~~~~~P~~~~rPFd~~rdG~v~gEGa~~ 237 (411)
T PRK08768 158 SAVSACATSNHSIGTAMRMIQHGDADVMLAGGAERGSSPSSVGGFCAMKAMSTRNDDPTGASRPWDKQRDGFVLGDGAGV 237 (411)
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCEEEE
T ss_conf 53541137889999999998678867455264202158788999998654520378988766666579998686680489
Q ss_pred EEECCCCCCCCC--CCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCC
Q ss_conf 122057654445--311355321367765278306986676544556552322451454343201003678988997401
Q gi|254780489|r 166 VVLAPSPLKDKS--GILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDL 243 (325)
Q Consensus 166 ~il~~~~~~~~~--~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl 243 (325)
+||++.+...+. .|.. ++...+...|.... ..-..++ ..+.+.++++|+++++
T Consensus 238 ~vLe~~e~A~~rga~i~a-~i~g~~~~~d~~~~----------------~~p~~~~--------~~~~~~~~~al~~a~~ 292 (411)
T PRK08768 238 LVLEEYEHAKARGARIYA-ELVGFGASSDAFHM----------------TAPSEDG--------EGAARSMAAAMRDAKL 292 (411)
T ss_pred EEECCHHHHHHCCCCEEE-EEEEEEECCCCCCC----------------CCCCCCH--------HHHHHHHHHHHHHCCC
T ss_conf 997148889867990789-99778761478888----------------7889777--------9999999999997698
Q ss_pred CCCCCCEEEECCCCCHHH-----HHHHHHCCCCHHHHH-H-HHHHCCCCCCCHHHHHHH---HHHHHCCC
Q ss_conf 200122463056541389-----999997197865700-2-185409330005999999---99980678
Q gi|254780489|r 244 QPQDINRFIPHQANSRII-----QKVCEKIGLSKRIMV-N-SLKDFGNSSSASIPLSLS---LENQRKPF 303 (325)
Q Consensus 244 ~~~did~~i~Hq~~~~~~-----~~~~~~lgi~~~~~~-~-~l~~~GN~~sAsi~~~L~---~~~~~g~i 303 (325)
+++||||+-.|--+-..- +++.+.++=...+.+ . +=..+||+-+|+=.+.+. .+++.+.+
T Consensus 293 ~~~~i~yi~aHgtgT~~~D~~E~~ai~~~fg~~~~~~~i~s~Ks~~GH~~~aaG~~~~~~~~l~l~~~~i 362 (411)
T PRK08768 293 NPEQIGYLNAHGTSTPLGDLAETMAMKRALGDHAYKTMVSSTKSMTGHLLGAAGGVEAIFSVMALHTGII 362 (411)
T ss_pred CCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 9310248996756675539999999999856789987478944554320899999999999999716973
No 55
>PRK06158 thiolase; Provisional
Probab=99.53 E-value=9e-13 Score=103.33 Aligned_cols=196 Identities=17% Similarity=0.130 Sum_probs=124.6
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 98879999999999986430132223442588431002368874322112100238633342101231012567657887
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYI 129 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i 129 (325)
++.+..+|+.+|+++||++||++++|||-+++++... .. ....+++.||++......+..+|+++..++..|...|
T Consensus 24 ~~~s~~eL~~eA~~~Al~DAGi~~~dID~~~~g~~~~--~~--~g~~~a~~lGl~~~~~~~~~~ggas~~~al~~A~~aI 99 (384)
T PRK06158 24 PGLSAMELLAQAAVRALADAGLTMADVDGLFTASPDS--AL--WGLSVAEYLGIRPRFVDGTMIGGSSFVSHLLPAALAL 99 (384)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCC--CC--HHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHH
T ss_conf 9979999999999999997599999909899971576--65--3999999829998124366668689999999999999
Q ss_pred HCC-CCEEEEEEECCCCCC-------C-------------------------------------------------CCC-
Q ss_conf 438-850588620122444-------4-------------------------------------------------622-
Q gi|254780489|r 130 NSH-QKPVLIIAANLLSRR-------I-------------------------------------------------NLE- 151 (325)
Q Consensus 130 ~~g-~~~vLVv~~e~~S~~-------~-------------------------------------------------d~~- 151 (325)
++| .+.|||+..+..+.. . ||.
T Consensus 100 ~sG~~d~vlV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~~~Al~a~rym~~yG~t~E~lA~vavk~r~nA~~NP~A 179 (384)
T PRK06158 100 EAGLCDVALICYGSNQRSAGGKLVSMLDPQPYEAPYKPVNPVTAYALAAARHMHQYGTTREQLAEVAVAARQWAQLNPEA 179 (384)
T ss_pred HCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf 85885389995235555566554335687444432355546889999999999997988999999999999987069863
Q ss_pred ---C---------------CCC---CCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCC
Q ss_conf ---2---------------443---4325442001122057654445311355321367765278306986676544556
Q gi|254780489|r 152 ---D---------------KDT---AIIFGDAAGAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTH 210 (325)
Q Consensus 152 ---d---------------~~~---~~lfGDgA~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 210 (325)
+ +.+ .-..+|||+|+||..++...+.+--.. .+.+.+.......
T Consensus 180 ~~r~~it~edvl~s~~Ia~PL~l~dc~~~sDGAaAvVl~s~e~Ar~l~~~pV------------~i~g~g~~~~~~~--- 244 (384)
T PRK06158 180 FMRDPLTIDDVLAARMVSDPLSVRDCCLVTDGAGAVVMVRADRARDLPRPPV------------YVLGAAAATWHRQ--- 244 (384)
T ss_pred CCCCCCCHHHHHCCCCCCCCHHHCCCCCCCCCEEEEEEECHHHHHHCCCCCE------------EEEEEEEECCCCC---
T ss_conf 1378879999721535456600114665666348999952888844799957------------9999998616876---
Q ss_pred CCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCH
Q ss_conf 55232245145434320100367898899740120012246305654138999999719786
Q gi|254780489|r 211 DFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSK 272 (325)
Q Consensus 211 ~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~ 272 (325)
....+++. .....+..+++++++|++++|||.+-.|-.-...--...+.||+-+
T Consensus 245 -----~~~~~d~~---~~~~~~aa~~A~~~AGi~p~DiDvaev~D~Ft~~~l~~~E~lG~~~ 298 (384)
T PRK06158 245 -----ISSMPDLT---VTAAAESGPRAFAMAGVTPADIDVVELYDAFTINTILFLEDLGFCA 298 (384)
T ss_pred -----CCCCCCCC---HHHHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHCCCCC
T ss_conf -----43355210---2799999999999809997778788641776088999999849998
No 56
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=99.52 E-value=2.2e-12 Score=100.82 Aligned_cols=241 Identities=16% Similarity=0.128 Sum_probs=141.0
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 988799999999999864301322234425884310023688--743221121002386333421012310125676578
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLP--PSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADS 127 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P--~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~ 127 (325)
++.+..+|+.+|+++||++||++++|||-++++.. ++.... .....+++.||+.+.++..+.++|+++..++..|..
T Consensus 19 ~~~~~~~l~~eA~~~AL~DAGl~~~dIDg~v~~~~-~~~~~~~~~~g~~~~~~lGl~~~p~~~ve~~casg~~a~~~A~~ 97 (415)
T PRK06365 19 PNMDFRLRVKKAFDYAMNDAGLTLADIDGSVASYF-SDHFQRQLMAGIMVQDYLGLVPKPSKRIEGGGATGGLAFQAGYE 97 (415)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEEC-CCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHH
T ss_conf 99889999999999999975999899698889841-78664210055899997188886425773772899999999999
Q ss_pred HHHCC-CCEEEEEEECCCCCCC------------C--CCCC---------------------------------------
Q ss_conf 87438-8505886201224444------------6--2224---------------------------------------
Q gi|254780489|r 128 YINSH-QKPVLIIAANLLSRRI------------N--LEDK--------------------------------------- 153 (325)
Q Consensus 128 ~i~~g-~~~vLVv~~e~~S~~~------------d--~~d~--------------------------------------- 153 (325)
.|++| .+.+||++.|.+|..- | +..+
T Consensus 98 ~I~sG~~d~vlv~G~ek~s~~~~~~~~~~~~~~~d~~~e~p~g~~~~~~~Al~a~rym~~yG~t~e~lA~Vavk~r~~A~ 177 (415)
T PRK06365 98 EIASGRMDVVAVYGFETMSHVNTWKGNEFIALASDTNFDYPIGGFYTGYYAMMAVRHMYEFGTTVEQMAKVSVKNHGNAI 177 (415)
T ss_pred HHHCCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
T ss_conf 99708787899974114567886665311102566553454555448899999999999869889999999999877552
Q ss_pred -------------------------CC---CCCCCCCEEEEEECCCCCCCCC-----CCEEEEEEECCCCCCEEEEECCC
Q ss_conf -------------------------43---4325442001122057654445-----31135532136776527830698
Q gi|254780489|r 154 -------------------------DT---AIIFGDAAGAVVLAPSPLKDKS-----GILGIELTSDGSKYDLIKIPTGG 200 (325)
Q Consensus 154 -------------------------~~---~~lfGDgA~A~il~~~~~~~~~-----~il~~~~~s~~~~~~~~~~~~~~ 200 (325)
.+ .-..+|||+|+||..++...+. .|...-..++ ...+....
T Consensus 178 ~NP~A~~~~~iTvedvl~s~~Ia~PL~lldcc~~sDGAaAvVl~see~Ar~~~~~pV~I~g~g~~~~-----~~~~~~r~ 252 (415)
T PRK06365 178 HNPYAQSPMKLTVEDVRKAPMVSYPLTRLDVCAMSDGAAVAILASEDKAFEITDHPVLIKAIGTGTD-----TMRLADRP 252 (415)
T ss_pred CCHHHHCCCCCCHHHHHCCCCCCCCCHHHCCCCCCCCEEEEEEECHHHHHHCCCCCEEEEEEEEECC-----CCCCCCCC
T ss_conf 5937648888998998318844367202126888886499999458988655799779999997125-----42003454
Q ss_pred C-CCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCC--CCCCEEEECCCCCHHHHHHHHHCCCCHH----
Q ss_conf 6-67654455655232245145434320100367898899740120--0122463056541389999997197865----
Q gi|254780489|r 201 S-TSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQP--QDINRFIPHQANSRIIQKVCEKIGLSKR---- 273 (325)
Q Consensus 201 ~-~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~--~did~~i~Hq~~~~~~~~~~~~lgi~~~---- 273 (325)
. ..|.-.......+....-+.+. ..+......+++++++|+++ +|||.+-+|-.-...--...+.||+-+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Aa~~Ay~~AGi~~p~~DiDv~ev~D~Ft~~el~~lE~lGfc~~Geg~ 330 (415)
T PRK06365 253 FGEVPLLPNENPSDYKNLKYPGVH--SFRAGRMAAKEAYERANITDPLNDLDLIELHDAYTSSEIQTYEDLGLCKYGEGG 330 (415)
T ss_pred CCCCCCCCCCCCCHHHCCCCCCCC--CHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCHH
T ss_conf 444544445672011023455410--027999999999997499996145877998457629999999984998898389
Q ss_pred ------------HHHHH----HHHCCCCCCCHHHHHHHHHH
Q ss_conf ------------70021----85409330005999999999
Q gi|254780489|r 274 ------------IMVNS----LKDFGNSSSASIPLSLSLEN 298 (325)
Q Consensus 274 ------------~~~~~----l~~~GN~~sAsi~~~L~~~~ 298 (325)
+++.| +--+||...|+-...+.++.
T Consensus 331 ~~v~~G~~~~~G~lPvN~sGGlls~Ghp~GatG~~q~vE~~ 371 (415)
T PRK06365 331 QFIDEGKPELDGKIPVNPSGGLLAAGHPVGATGIMQAVFMF 371 (415)
T ss_pred HHHHCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHH
T ss_conf 99977996689971267885233078656513999999999
No 57
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=99.51 E-value=5.1e-13 Score=104.96 Aligned_cols=98 Identities=9% Similarity=0.030 Sum_probs=82.1
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEE-CCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 9887999999999998643013222344258843100-236887432211210023-86333421012310125676578
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTP-DHLLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADS 127 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~-d~~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~ 127 (325)
.+.++.+|+..+.+.+|++++++|++||.++++...+ ....+..+..+.-..|++ .++++.|+..|++++.|+..|.+
T Consensus 22 ~~~~~~~L~a~ai~~~l~r~~i~p~~Id~vi~G~v~~~g~~~~n~aR~~~L~aGlp~~vpa~tVn~~CaSGl~Av~~A~~ 101 (382)
T PRK07801 22 AGVHPADLGAHVLRGLVDRNDIDPAAVDDVIFGCVDAIGPQAGNIARTSWLAAGYPEEVPGVTVDRQCGSSQQAIHFAAQ 101 (382)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHH
T ss_conf 99999999999999999980979899898999716665665567999999976999888648884121589999999998
Q ss_pred HHHCC-CCEEEEEEECCCCCC
Q ss_conf 87438-850588620122444
Q gi|254780489|r 128 YINSH-QKPVLIIAANLLSRR 147 (325)
Q Consensus 128 ~i~~g-~~~vLVv~~e~~S~~ 147 (325)
.|++| ..-+|+++.|.+|+.
T Consensus 102 ~I~~G~~dv~lagGvEsMS~~ 122 (382)
T PRK07801 102 AIMSGTADVIVAGGVQNMSQI 122 (382)
T ss_pred HHCCCCCCEEEECCEEECCCC
T ss_conf 862899674665154322557
No 58
>PRK07025 consensus
Probab=99.50 E-value=4.2e-13 Score=105.51 Aligned_cols=98 Identities=14% Similarity=0.136 Sum_probs=82.6
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9887999999999998643013222344258843100236887432211210023-863334210123101256765788
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADSY 128 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~~ 128 (325)
.+.++.+|+..+++.+|++++++|++||-||++.+.+...-+..+..+.-..|++ .++++.|+..|.+++.|+..|...
T Consensus 22 ~~~~~~~L~~~~i~~~l~r~~i~~~~Id~vi~G~v~~~g~g~n~aR~~al~aGlp~~vp~~tVnr~C~SGl~Ai~~Aa~~ 101 (393)
T PRK07025 22 AKIAAPELGATVIRAVLERAGVKPEQVSEVILGQVLTAGSGQNPARQALIKAGLPNAVPGMTINKVCGSGLKAVMLAANA 101 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHH
T ss_conf 88989999999999999982989899898999924765556649999999769998886488841536778999999999
Q ss_pred HHCCC-CEEEEEEECCCCCC
Q ss_conf 74388-50588620122444
Q gi|254780489|r 129 INSHQ-KPVLIIAANLLSRR 147 (325)
Q Consensus 129 i~~g~-~~vLVv~~e~~S~~ 147 (325)
|++|. .-+|+.+.|.+|+.
T Consensus 102 I~~G~~dvvlagGvEsmS~~ 121 (393)
T PRK07025 102 IVAGDAEIVVAGGQENMSAA 121 (393)
T ss_pred HHCCCCCEEEEEEEEECCCC
T ss_conf 86799766788601103567
No 59
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=99.50 E-value=2.6e-13 Score=106.84 Aligned_cols=98 Identities=11% Similarity=0.050 Sum_probs=83.9
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9887999999999998643013222344258843100236887432211210023-863334210123101256765788
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADSY 128 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~~ 128 (325)
.+.++.+|+..+.+.+|++++++|++||.||++.+.+...-+..+..++-..|++ .++++.|+..|.+++.|+..|.+.
T Consensus 22 ~~~~~~~L~~~~i~~~l~~~gl~~~~Id~vi~G~v~~~~~g~n~ar~~al~aGlp~~vp~~tVnr~C~Sgl~Ai~~A~~~ 101 (388)
T PRK06366 22 SKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVNVVCASGMLAVESAARE 101 (388)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf 88998999999999999871989899898999952754556519999999759998886588857255999999999999
Q ss_pred HHCC-CCEEEEEEECCCCCC
Q ss_conf 7438-850588620122444
Q gi|254780489|r 129 INSH-QKPVLIIAANLLSRR 147 (325)
Q Consensus 129 i~~g-~~~vLVv~~e~~S~~ 147 (325)
|++| ..-+++.+.|.+|+.
T Consensus 102 I~sG~~dvviagGvEsMS~~ 121 (388)
T PRK06366 102 IMLGERDLVIAGGMENMSNA 121 (388)
T ss_pred HHCCCCCEEEEECCCCCCCC
T ss_conf 96699876787042214578
No 60
>PRK06689 consensus
Probab=99.50 E-value=4.9e-13 Score=105.07 Aligned_cols=98 Identities=12% Similarity=0.128 Sum_probs=81.8
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9887999999999998643013222344258843100236887432211210023-863334210123101256765788
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADSY 128 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~~ 128 (325)
.+.++.+|+..+.+.+|++++++|++||-||++.+.+.-..+..|..++-.-|++ .++++.|+..|.+++.|+..|.+.
T Consensus 22 ~~~~~~~L~a~~i~~~l~r~gi~p~~Id~vi~G~~~~~g~~~n~AR~aaL~aGlp~~vp~~tVnr~C~Sgl~Ai~~aa~~ 101 (391)
T PRK06689 22 KNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPDTVTGYTIQRQCSSGMQAIMSAAMQ 101 (391)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHH
T ss_conf 88988999999999999874999799898999806676666609999999769998887067766215789999999999
Q ss_pred HHCCCC-EEEEEEECCCCCC
Q ss_conf 743885-0588620122444
Q gi|254780489|r 129 INSHQK-PVLIIAANLLSRR 147 (325)
Q Consensus 129 i~~g~~-~vLVv~~e~~S~~ 147 (325)
|++|.. -++..+.|.+|+.
T Consensus 102 I~~G~~dvviAGGvEsMS~~ 121 (391)
T PRK06689 102 IQLGVSEVVVAGGVEAMSSS 121 (391)
T ss_pred HHCCCCCEEEEECCCCCCCC
T ss_conf 86799865686043467777
No 61
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=99.49 E-value=7.3e-13 Score=103.92 Aligned_cols=98 Identities=13% Similarity=0.152 Sum_probs=82.1
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9887999999999998643013222344258843100236887432211210023-863334210123101256765788
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADSY 128 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~~ 128 (325)
.+.++.+|+..+.+++|++++++|++||.||++.+.+...-+..+..+.-.-|++ .++++.|+..|.+++.|+..|...
T Consensus 27 ~~~~~~~L~a~~i~~~l~r~~~~~~~Id~vi~G~~~~~g~g~n~aR~~~L~aGlp~~vpa~tVnr~C~SGl~Ai~~a~~~ 106 (397)
T PRK06954 27 ASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCTTVNKMCGSGMRAAMFAHDM 106 (397)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHH
T ss_conf 89999999999999999873989899798999823655656649999999769998887788726658999999999999
Q ss_pred HHCCC-CEEEEEEECCCCCC
Q ss_conf 74388-50588620122444
Q gi|254780489|r 129 INSHQ-KPVLIIAANLLSRR 147 (325)
Q Consensus 129 i~~g~-~~vLVv~~e~~S~~ 147 (325)
|++|. +-+|+.+.|.+|+.
T Consensus 107 I~sG~~dvvlagGvEsmS~~ 126 (397)
T PRK06954 107 LVAGSVDVIVAGGMESMTNA 126 (397)
T ss_pred HHCCCCCEEEEECCCCCCCC
T ss_conf 96799745676334456767
No 62
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=99.49 E-value=1.5e-12 Score=101.92 Aligned_cols=275 Identities=17% Similarity=0.231 Sum_probs=152.8
Q ss_pred CCCEEEEEEEEECCCCCCCHHHHHHHH--CCC-HHHEE--ECCCCCEE--------------EEE-----CCCCCHHHHH
Q ss_conf 662099999973588613888999880--999-76831--11475088--------------994-----8988799999
Q gi|254780489|r 3 KSSSCILGFGHAVPNQCIHNSIIERHL--NLK-LGVIE--QKTGIKYR--------------YWA-----EKHETLTDIA 58 (325)
Q Consensus 3 ~~~~~I~g~g~~lP~~~i~n~~l~~~~--~~~-~~~i~--~~tGI~~R--------------~~~-----~~~e~~~~la 58 (325)
.+.|.|+|+|..-|-- .+-+++-+-+ |.+ ...|. ...+...+ ++. ........++
T Consensus 60 ~rRVVITGiGiVsp~G-~~~e~fw~aL~~G~SGI~~i~~fd~~~~~~~iageV~~~df~p~~~~~~~k~~~r~dr~~~~a 138 (477)
T PTZ00050 60 TSRVVCTGIGVVNGLG-IGIEHFWENIINGYNSIDKITKFDITGMACGIGSEIDKKDFNPSDYYTNKKDANRNDDCTHYA 138 (477)
T ss_pred CCCEEEECCHHHCCCC-CCHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEEECCCCCCHHHCCCCHHHHHHHCHHHHHH
T ss_conf 7749995813317881-999999999975899814178667668977668860267889666047888885307999999
Q ss_pred HHHHHHHHHHCCCCCCCCCE----EEEEEEEE-----------------C----CCCC-----CCCCCCCCCCCCCCCCC
Q ss_conf 99999986430132223442----58843100-----------------2----3688-----74322112100238633
Q gi|254780489|r 59 IQAGDIALRNANIKKDSISL----TLLATSTP-----------------D----HLLP-----PSSPLITHRLGLMQSGA 108 (325)
Q Consensus 59 ~~Aa~~aL~~a~~~~~dId~----ii~~s~t~-----------------d----~~~P-----~~a~~v~~~Lg~~~~~~ 108 (325)
+.|+++||++|+++++++|. +++++... . +..| ..+..|+.++|++. ++
T Consensus 139 l~Aa~eAl~DAgl~~~~~~~~r~Gv~iGs~~gg~~~~e~~~~~l~~~g~~~v~p~~~~~~~~n~~a~~is~~~~l~G-ps 217 (477)
T PTZ00050 139 VAATRLAIDDAKIDLEKIDCDKTGTIIGSGIGGLLFLEKEMKTLYEKGHKRISPYLIPAMIANTPAGFVSIEHNIRG-IS 217 (477)
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC-CC
T ss_conf 99999999967999543671015348704877389999999999854977438527778887699999999739948-75
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCC-CEEEEEEECC-CCCC----------C------C------CCC-CCCCCCCCCCE
Q ss_conf 3421012310125676578874388-5058862012-2444----------4------6------222-44343254420
Q gi|254780489|r 109 IDLTGACAGFLYALVMADSYINSHQ-KPVLIIAANL-LSRR----------I------N------LED-KDTAIIFGDAA 163 (325)
Q Consensus 109 ~di~~~C~g~l~aL~~A~~~i~~g~-~~vLVv~~e~-~S~~----------~------d------~~d-~~~~~lfGDgA 163 (325)
+.++.+|++++.||..|.++|+.|. +.+++-++|. .++. + + |-| +...+.+|+||
T Consensus 218 ~ti~tACaSs~~AI~~A~~~Ir~G~~d~~IaGG~d~~l~p~~~~~f~~l~aL~s~~nd~P~~~~rPFD~~rdG~V~GEGa 297 (477)
T PTZ00050 218 LGMLSACATSGNTIGEAYRYIKYKEYDVMICGGTEASITPISFAGFNALKALCSGYNDNPKKGCRPFDLKRSGFVMGEGA 297 (477)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCE
T ss_conf 67044747889999999999975984559998456666728899999876554036789876724465899827723765
Q ss_pred EEEEECCCCCCCCC--CCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 01122057654445--3113553213677652783069866765445565523224514543432010036789889974
Q gi|254780489|r 164 GAVVLAPSPLKDKS--GILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKS 241 (325)
Q Consensus 164 ~A~il~~~~~~~~~--~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~ 241 (325)
+++||++.+..... .|.+. +...+...|...+ ..-..+| ..+.++++++|+++
T Consensus 298 g~lVLE~~e~A~~RGa~Iyae-i~G~~~~~Dg~~~----------------t~p~p~g--------~g~~~am~~AL~~A 352 (477)
T PTZ00050 298 GILILESYEHAIKRNAKIYGE-IIAYSSECDAFHI----------------TAPEPNG--------KGLCNSIHKAIKNA 352 (477)
T ss_pred EEEEEEEHHHHHHCCCEEEEE-EECCCCCCCCCCC----------------CCCCCCH--------HHHHHHHHHHHHHH
T ss_conf 899972887776589988675-2055424689988----------------7749799--------99999999999971
Q ss_pred CCCCCCCCEEEECCCCCHH-----HHHHHHHCCCCHHHHHH--HHHHCCCCCCCHHHHHHHH---HHHHCCCC
Q ss_conf 0120012246305654138-----99999971978657002--1854093300059999999---99806789
Q gi|254780489|r 242 DLQPQDINRFIPHQANSRI-----IQKVCEKIGLSKRIMVN--SLKDFGNSSSASIPLSLSL---ENQRKPFQ 304 (325)
Q Consensus 242 gl~~~did~~i~Hq~~~~~-----~~~~~~~lgi~~~~~~~--~l~~~GN~~sAsi~~~L~~---~~~~g~i~ 304 (325)
+++++||||+-.|--+-.. .+++.+.++=...+++. +=..+||+-+|+=.+.+.. +++.+.+.
T Consensus 353 gl~~~dIdyInaHGTgT~~gD~~E~~Ai~~vfg~~~~~~~VsS~Ks~iGH~lgAAGa~e~i~~llal~~g~iP 425 (477)
T PTZ00050 353 NININDVKYINAHGTSTNLNDKIETKVFKNVFKDHAYKLHISSTKSMTGHCIGAAGAIESIVCLKAMQTNIIP 425 (477)
T ss_pred CCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEECCHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 7897450089961776887899999999998657899865888613330047999999999999998419438
No 63
>TIGR03150 fabF 3-oxoacyl-[acyl-carrier-protein] synthase 2. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.49 E-value=1.4e-12 Score=102.06 Aligned_cols=273 Identities=16% Similarity=0.226 Sum_probs=149.0
Q ss_pred CCEEEEEEEEECCCCCCCHHHHHHHH--CCC-HHHEEEC--CCCCEEEEE-----CCC-----------CCHHHHHHHHH
Q ss_conf 62099999973588613888999880--999-7683111--475088994-----898-----------87999999999
Q gi|254780489|r 4 SSSCILGFGHAVPNQCIHNSIIERHL--NLK-LGVIEQK--TGIKYRYWA-----EKH-----------ETLTDIAIQAG 62 (325)
Q Consensus 4 ~~~~I~g~g~~lP~~~i~n~~l~~~~--~~~-~~~i~~~--tGI~~R~~~-----~~~-----------e~~~~la~~Aa 62 (325)
+++.|+|+|.-.|.-. +-+++-+.+ +.+ ...+.+. .+...++-. ++. ....-++.+++
T Consensus 1 rrVaItG~g~~~P~g~-~~~~~w~~L~~g~s~i~~~~~~d~~~~~~~~~g~v~~fd~~~~i~~~~a~~~dp~~~l~l~aa 79 (407)
T TIGR03150 1 RRVVVTGLGAVTPLGN-GVEEFWENLLAGKSGIGPITRFDASDLPVKIAGEVKDFDPEDYIDKKEARRMDRFIQYALAAA 79 (407)
T ss_pred CEEEEEECEEECCCCC-CHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEECCCCHHHCCCHHHHHHCCHHHHHHHHHH
T ss_conf 9399984677897979-999999999739974443687786468775677727889466589999975199999999999
Q ss_pred HHHHHHCCCCCCCCC----EEEEEEEE-----------------ECCC----CCC-----CCCCCCCCCCCCCCCCCCCC
Q ss_conf 998643013222344----25884310-----------------0236----887-----43221121002386333421
Q gi|254780489|r 63 DIALRNANIKKDSIS----LTLLATST-----------------PDHL----LPP-----SSPLITHRLGLMQSGAIDLT 112 (325)
Q Consensus 63 ~~aL~~a~~~~~dId----~ii~~s~t-----------------~d~~----~P~-----~a~~v~~~Lg~~~~~~~di~ 112 (325)
.+||++||+.+++++ -|+++++. ++.. .|. .+.+|...+|++. +++-+.
T Consensus 80 ~~Al~dAG~~~~~~~~~~~gv~~gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~is~~~~l~G-p~~tv~ 158 (407)
T TIGR03150 80 KEAVEDSGLDIEEEDAERVGVIVGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAKG-PNHAVV 158 (407)
T ss_pred HHHHHHCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC-CCCCCC
T ss_conf 9999863998445286645999925767457799999999853844458540157662589999999859999-644644
Q ss_pred CCCCCCHHHHHHHHHHHHCCC-CEEEEEEECC-C--------------CCC-------CC-CCCCCCCCCCCCCEEEEEE
Q ss_conf 012310125676578874388-5058862012-2--------------444-------46-2224434325442001122
Q gi|254780489|r 113 GACAGFLYALVMADSYINSHQ-KPVLIIAANL-L--------------SRR-------IN-LEDKDTAIIFGDAAGAVVL 168 (325)
Q Consensus 113 ~~C~g~l~aL~~A~~~i~~g~-~~vLVv~~e~-~--------------S~~-------~d-~~d~~~~~lfGDgA~A~il 168 (325)
.+|++++.||..|..+|+.|. +.++|.++|. + |.. .. ++.....+.+|+||+++||
T Consensus 159 taCsSsl~Al~~A~~~i~~G~~d~aivGG~~~~l~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~a~G~v~gEGa~~vvL 238 (407)
T TIGR03150 159 TACATGTHAIGDAFRLIQYGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDRDGFVMGEGAGVLVL 238 (407)
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 44389999999999998739854655037443579899999998877730678987776542247997445484578740
Q ss_pred CCCCCCC--CCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCC
Q ss_conf 0576544--45311355321367765278306986676544556552322451454343201003678988997401200
Q gi|254780489|r 169 APSPLKD--KSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQ 246 (325)
Q Consensus 169 ~~~~~~~--~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~ 246 (325)
++.+... +..|...... .+...|...+ ..| ..++ ....++++++|++++++++
T Consensus 239 e~~~~A~~~g~~I~a~i~g-~g~~~d~~~~-----t~~-----------~p~~--------~~~~~~i~~al~~agi~~~ 293 (407)
T TIGR03150 239 EELEHAKARGAKIYAEIVG-YGMSGDAYHI-----TAP-----------APEG--------EGAARAMRAALKDAGINPE 293 (407)
T ss_pred CCHHHHHHCCCEEEEEEEE-EEEECCCCCC-----CCC-----------CCCC--------HHHHHHHHHHHHHHCCCCC
T ss_conf 6699998779968999821-0550158876-----465-----------9981--------6788899999998689986
Q ss_pred CCCEEEECCCCCHH-----HHHHHHHCCCCHHHHH--HHHHHCCCCCCCHHHHHHH---HHHHHCCC
Q ss_conf 12246305654138-----9999997197865700--2185409330005999999---99980678
Q gi|254780489|r 247 DINRFIPHQANSRI-----IQKVCEKIGLSKRIMV--NSLKDFGNSSSASIPLSLS---LENQRKPF 303 (325)
Q Consensus 247 did~~i~Hq~~~~~-----~~~~~~~lgi~~~~~~--~~l~~~GN~~sAsi~~~L~---~~~~~g~i 303 (325)
|||++-.|-.+-.. .+++.+.++=...+.+ .+=..+||+-.|+=.+.+- .+++.+.+
T Consensus 294 ~I~yIe~Hgtgt~~~D~~E~~al~~~fg~~~~~~~i~S~K~~~GH~~~AaG~~~lik~~l~l~~~~i 360 (407)
T TIGR03150 294 DVDYINAHGTSTPLGDKAETKAIKRVFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIFTVLAIRDGVV 360 (407)
T ss_pred CEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 3349997368787769999999999862568986578855554314899999999999999825963
No 64
>PRK07491 consensus
Probab=99.48 E-value=1.1e-12 Score=102.84 Aligned_cols=98 Identities=17% Similarity=0.157 Sum_probs=82.1
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9887999999999998643013222344258843100236887432211210023-863334210123101256765788
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADSY 128 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~~ 128 (325)
.+.++.+|+..+++.+|++++++|++||-||++.+.+.-.-+..+..+.-.-|++ .++++.|+..|.+++.|+..|...
T Consensus 23 ~~~~~~~L~~~~i~~~l~r~~l~~~~Id~Vi~G~v~~~g~g~n~aR~~~L~aGlp~~vp~~tVnr~C~SGl~Ai~~Aa~~ 102 (392)
T PRK07491 23 ANTPAHELGAVAIKAALERAGVDAADVSEVILGQVLTAGQGQNPARQASIKAGLPQESPAWGINQLCGSGLRAVALGAQQ 102 (392)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHH
T ss_conf 99999999999999999871979899898999945755655619999999769898886489806034577899999998
Q ss_pred HHCCC-CEEEEEEECCCCCC
Q ss_conf 74388-50588620122444
Q gi|254780489|r 129 INSHQ-KPVLIIAANLLSRR 147 (325)
Q Consensus 129 i~~g~-~~vLVv~~e~~S~~ 147 (325)
|++|. .-+++.+.|.+|+.
T Consensus 103 I~~G~~dvvlagGvEsmS~~ 122 (392)
T PRK07491 103 IANGDAKIVVAGGQESMSMA 122 (392)
T ss_pred HCCCCCCEEEEECCCCCCCC
T ss_conf 65898646776324423556
No 65
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.48 E-value=1.4e-12 Score=102.02 Aligned_cols=98 Identities=14% Similarity=0.123 Sum_probs=83.4
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9887999999999998643013222344258843100236887432211210023-863334210123101256765788
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADSY 128 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~~ 128 (325)
.+.++.+|+..+++++|++++++|++||-||++.+.+...-+..+..+.-..|++ .++++.|+..|.+++.++..|...
T Consensus 22 ~~~~~~~L~a~~i~~~l~r~~i~p~~Id~Vi~G~v~~~g~g~n~aR~~aL~aGlp~~vp~~tVnr~C~SGl~Ai~~Aa~~ 101 (392)
T PRK05656 22 ANIPAVDLGAAVIRQLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTLNKVCGSGLKALHLAAQA 101 (392)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHH
T ss_conf 89988999999999999983999899898999904765666639999999779998886489852536778999999999
Q ss_pred HHCCC-CEEEEEEECCCCCC
Q ss_conf 74388-50588620122444
Q gi|254780489|r 129 INSHQ-KPVLIIAANLLSRR 147 (325)
Q Consensus 129 i~~g~-~~vLVv~~e~~S~~ 147 (325)
|++|. .-+++.+.|.+|+.
T Consensus 102 I~~G~~dv~iagGvEsmS~~ 121 (392)
T PRK05656 102 IRCGDAEVIIAGGQENMSLA 121 (392)
T ss_pred HHCCCCCEEEEECCCCCCCC
T ss_conf 86699757898343336788
No 66
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=99.48 E-value=2.6e-12 Score=100.34 Aligned_cols=97 Identities=13% Similarity=0.127 Sum_probs=79.2
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECC-CCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 988799999999999864301322234425884310023-6887432211210023-86333421012310125676578
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDH-LLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADS 127 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~-~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~ 127 (325)
.+.++.+|+..+++.+|++++++|++||-||++.+.+.- .-+..+..+.-.-|++ .++++.|+..|.|++.|+..|.+
T Consensus 25 ~~~~~~~Lga~~i~~~l~r~gi~p~~ID~Vi~G~v~~~g~~g~n~aR~aaL~AGlp~~vpa~TVnr~C~SGl~Ai~~aa~ 104 (417)
T PRK06025 25 AHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKASGVTLDRFCGGGITSVNLAAA 104 (417)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHH
T ss_conf 99989999999999999870989799898999807776543465999999967999888607875746408999999999
Q ss_pred HHHCCC-CEEEEEEECCCCC
Q ss_conf 874388-5058862012244
Q gi|254780489|r 128 YINSHQ-KPVLIIAANLLSR 146 (325)
Q Consensus 128 ~i~~g~-~~vLVv~~e~~S~ 146 (325)
.|++|. +-++..+.|.+|+
T Consensus 105 ~I~~G~~dvviAGGvEsmS~ 124 (417)
T PRK06025 105 QIMSGMEDLVIAGGTEMMSY 124 (417)
T ss_pred HHHCCCCCEEEEEEEECCCC
T ss_conf 99769998678953423676
No 67
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.48 E-value=4.6e-12 Score=98.71 Aligned_cols=277 Identities=18% Similarity=0.253 Sum_probs=158.6
Q ss_pred CEEEEEEEEECCCCCCCHHHHHHHHCCCHHHEEECCCCCEEE-E-----------ECCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 209999997358861388899988099976831114750889-9-----------4898879999999999986430132
Q gi|254780489|r 5 SSCILGFGHAVPNQCIHNSIIERHLNLKLGVIEQKTGIKYRY-W-----------AEKHETLTDIAIQAGDIALRNANIK 72 (325)
Q Consensus 5 ~~~I~g~g~~lP~~~i~n~~l~~~~~~~~~~i~~~tGI~~R~-~-----------~~~~e~~~~la~~Aa~~aL~~a~~~ 72 (325)
.+.|+|+|..-|-- .-+|.-+. .+.-++||.... + ........++...|+++||++++++
T Consensus 3 RVVITGiG~vSplG--~~~e~w~~------L~~G~sgI~~~~~f~~~~~~~~~~~~~~~~~~~~l~~~a~~~Al~dAgl~ 74 (379)
T PRK05952 3 KVVVTGIGLVSALG--SLEQSWQR------LLQGKSGIKLHQPFPELPPLPLGLIGSQPISLEDLTQTTVTAALKDAGLT 74 (379)
T ss_pred EEEEECCEEECCCC--CHHHHHHH------HHCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
T ss_conf 79994511068888--85999999------97689882567777777761420027785689999999999999977999
Q ss_pred CC--CCCEEEEEEEEEC--------------------------CCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 22--3442588431002--------------------------36887-4322112100238633342101231012567
Q gi|254780489|r 73 KD--SISLTLLATSTPD--------------------------HLLPP-SSPLITHRLGLMQSGAIDLTGACAGFLYALV 123 (325)
Q Consensus 73 ~~--dId~ii~~s~t~d--------------------------~~~P~-~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~ 123 (325)
+. ++..+ ++++... ..+|. .+..++..+|++. +++-++.+|++++.||.
T Consensus 75 ~~~~~~gv~-~Gt~~g~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~ia~~~g~~G-~~~~~~~aCaS~~~Ai~ 152 (379)
T PRK05952 75 PPLTDCGVV-IGSSRGFQGQWEKLARQIYVGDQSGDEAEENWLDTLPHQAAIATARQIGAQG-PVLAPMAACATGIWAIA 152 (379)
T ss_pred CCCCCEEEE-EEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC-CEECCCCHHHHHHHHHH
T ss_conf 975465899-9967526768999998752047888667216999853399999999839999-62040127478999999
Q ss_pred HHHHHHHCC-CCEEEEEEECC-CCCC---------------CCCCC-CCCCCCCCCCEEEEEECCCCCCCCC--CCEEEE
Q ss_conf 657887438-85058862012-2444---------------46222-4434325442001122057654445--311355
Q gi|254780489|r 124 MADSYINSH-QKPVLIIAANL-LSRR---------------INLED-KDTAIIFGDAAGAVVLAPSPLKDKS--GILGIE 183 (325)
Q Consensus 124 ~A~~~i~~g-~~~vLVv~~e~-~S~~---------------~d~~d-~~~~~lfGDgA~A~il~~~~~~~~~--~il~~~ 183 (325)
.|.++|++| .+.++|.++|. .+.. ..|-| +...+++|+||+++||+..+...+. .+...
T Consensus 153 ~A~~~I~~G~~d~~i~gg~~~~~~~~~~~~f~~~~~ls~~~~rPFd~~r~G~v~gEGa~~lvLE~~~~A~~rga~iya~- 231 (379)
T PRK05952 153 QGAELIQTGQCQRVIAGAVESPITPLTLAGFQKMGALAKTGAYPFDRQREGLVLGEGGAILVLESEELAQKRGAKIYGQ- 231 (379)
T ss_pred HHHHHHHCCCCCEEEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCEEEEECCHHHHHHCCCCEEEE-
T ss_conf 9999998399887986787652482768999865783446767454689960258750467645599998789956899-
Q ss_pred EEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHH--
Q ss_conf 321367765278306986676544556552322451454343201003678988997401200122463056541389--
Q gi|254780489|r 184 LTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFIPHQANSRII-- 261 (325)
Q Consensus 184 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~-- 261 (325)
+...+...|.... ..-..++. .+.++++++|++++++++||||+-.|-.+-...
T Consensus 232 i~g~~~~~d~~~~----------------~~~~~~g~--------~~~~am~~al~~agi~~~~Idyi~aHgtgT~~~D~ 287 (379)
T PRK05952 232 ILGFGLTCDAYHM----------------SAPEPSGK--------SAILAIQQCLARSGLTPEDIDYIHAHGTATRLNDQ 287 (379)
T ss_pred EECCEECCCCCCC----------------CCCCCCHH--------HHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCH
T ss_conf 9352553689888----------------78898989--------99999999999849983335289946787877699
Q ss_pred ---HHHHHHCCCCHHHHH-H-HHHHCCCCCCCHHHHHHH---HHHHHCCCCC---------------------CCEEEEE
Q ss_conf ---999997197865700-2-185409330005999999---9998067899---------------------9899999
Q gi|254780489|r 262 ---QKVCEKIGLSKRIMV-N-SLKDFGNSSSASIPLSLS---LENQRKPFQK---------------------GEKILTI 312 (325)
Q Consensus 262 ---~~~~~~lgi~~~~~~-~-~l~~~GN~~sAsi~~~L~---~~~~~g~i~~---------------------Gd~vll~ 312 (325)
+++.+.++ ++.+ . +=..+||+-+|+=.+.+. .+++++.+.| -+.+|.-
T Consensus 288 ~E~~ai~~vfg---~~~~v~s~Ks~~GH~~~aaG~~e~~~~~l~l~~~~ippt~n~~~p~~~l~~v~~~~~~~~~~aL~n 364 (379)
T PRK05952 288 REANLIQTLFP---HRVAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPPCVGLQEPEFDLNFVRQARQSPLKNVLCL 364 (379)
T ss_pred HHHHHHHHHHC---CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 99999999718---778877874332453277799999999999953971898899999989987787633788899996
Q ss_pred EECCCCC
Q ss_conf 8615510
Q gi|254780489|r 313 SCRRGND 319 (325)
Q Consensus 313 ~~G~G~s 319 (325)
+||-|-+
T Consensus 365 sfgfGG~ 371 (379)
T PRK05952 365 SFGFGGQ 371 (379)
T ss_pred EECCCCE
T ss_conf 2258736
No 68
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=99.47 E-value=2e-12 Score=101.06 Aligned_cols=269 Identities=19% Similarity=0.161 Sum_probs=150.7
Q ss_pred CEEEEEEEEECCCCCCCHHHHHHHH--CCC-HH---H-------------EEECCCCCEEEEECCC---------CCHHH
Q ss_conf 2099999973588613888999880--999-76---8-------------3111475088994898---------87999
Q gi|254780489|r 5 SSCILGFGHAVPNQCIHNSIIERHL--NLK-LG---V-------------IEQKTGIKYRYWAEKH---------ETLTD 56 (325)
Q Consensus 5 ~~~I~g~g~~lP~~~i~n~~l~~~~--~~~-~~---~-------------i~~~tGI~~R~~~~~~---------e~~~~ 56 (325)
.+.|+|+|...|-- .+-+++-+.+ |.+ .. + .....|-+.+.+..++ .....
T Consensus 8 rVvITGiG~vtp~G-~~~~e~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 86 (415)
T PRK07103 8 EVVVTGVGVVSAIG-QGRQPFAAALLAGRHAFGVMRRPGRQLPDDPGAGPAPAFFGAEIDSLALPPMLDAHRRRASYSAQ 86 (415)
T ss_pred EEEEECCEEECCCC-CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHH
T ss_conf 19998886378883-89999999997599865656656664668743334456556435666630028899875529999
Q ss_pred HHHHHHHHHHHHCCCCC---CCCCEEEEEEEE---------------ECCCCCC---------CCCCCCCCCCCCCCCCC
Q ss_conf 99999999864301322---234425884310---------------0236887---------43221121002386333
Q gi|254780489|r 57 IAIQAGDIALRNANIKK---DSISLTLLATST---------------PDHLLPP---------SSPLITHRLGLMQSGAI 109 (325)
Q Consensus 57 la~~Aa~~aL~~a~~~~---~dId~ii~~s~t---------------~d~~~P~---------~a~~v~~~Lg~~~~~~~ 109 (325)
++..|+++|++++++++ ..+.+++.++.. +.+..|. .+..|+..+|++. +++
T Consensus 87 ~a~~a~~~Al~dagl~~~~~~r~G~~vg~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~gl~G-p~~ 165 (415)
T PRK07103 87 AALAAVREAWDDAALGDVDPLRIGLVVGGSNVQQRELALVHDAYRERPAFLRPSYGLSFMDSDLCGLCTEQFGIRG-VAF 165 (415)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC-CCC
T ss_conf 9999999999967999778775289999674658999999998556998137658887510589999999968999-720
Q ss_pred CCCCCCCCCHHHHHHHHHHHHCCC-CEEEEEEECC-CCCC-----------------------CCCCC-CCCCCCCCCCE
Q ss_conf 421012310125676578874388-5058862012-2444-----------------------46222-44343254420
Q gi|254780489|r 110 DLTGACAGFLYALVMADSYINSHQ-KPVLIIAANL-LSRR-----------------------INLED-KDTAIIFGDAA 163 (325)
Q Consensus 110 di~~~C~g~l~aL~~A~~~i~~g~-~~vLVv~~e~-~S~~-----------------------~d~~d-~~~~~lfGDgA 163 (325)
-++.+|++++.||..|.++|+.|. ..+++.+++. .|.. ..|-| ....+++|+||
T Consensus 166 tv~tACaSg~~Ai~~A~~~Ir~G~~D~ai~gG~~~~ls~~~~~~f~~lgals~~~~~~~P~~~~rPFD~~rdG~v~GEGa 245 (415)
T PRK07103 166 TVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDRDGFIYGEAC 245 (415)
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCE
T ss_conf 10153215999999999999839999888426322205688999998677631446789876666010589964352764
Q ss_pred EEEEECCCCCCCCC--CCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 01122057654445--3113553213677652783069866765445565523224514543432010036789889974
Q gi|254780489|r 164 GAVVLAPSPLKDKS--GILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKS 241 (325)
Q Consensus 164 ~A~il~~~~~~~~~--~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~ 241 (325)
+++||++.+..... .|++.. ...+...|.... ...+. .-..++++++|+++
T Consensus 246 ~~lvLE~~e~A~~RGa~i~a~i-~G~g~~~Da~~~------------------~~p~~--------~g~~~am~~Al~~A 298 (415)
T PRK07103 246 GAIVVERAERARRRGVRPYAKL-LGWSIRLDATRG------------------PAPSL--------DGEMAVIRGALRRA 298 (415)
T ss_pred EEEEEHHHHHHHHCCCEEEEEE-EEEEECCCCCCC------------------CCCCH--------HHHHHHHHHHHHHC
T ss_conf 7763311666876799588998-310451478788------------------89977--------99999999999982
Q ss_pred CCCCCCCCEEEECCCCCHHH-----HHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHH---HHHHHHCCC
Q ss_conf 01200122463056541389-----999997197865700218540933000599999---999980678
Q gi|254780489|r 242 DLQPQDINRFIPHQANSRII-----QKVCEKIGLSKRIMVNSLKDFGNSSSASIPLSL---SLENQRKPF 303 (325)
Q Consensus 242 gl~~~did~~i~Hq~~~~~~-----~~~~~~lgi~~~~~~~~l~~~GN~~sAsi~~~L---~~~~~~g~i 303 (325)
+++++||||+..|--+-+.- +++.+.++=. -.+..+=..+||+-.|+=.+.+ -.+++.+.+
T Consensus 299 gl~~~~IdyI~aHgTgT~~~D~~E~~Al~~~fg~~-~~v~S~Ks~~GH~lgAaGa~e~i~~~lal~~~~i 367 (415)
T PRK07103 299 GLGPADIDYVNPHGTGSVLGDATELDALRASGLAH-ARINTTKSLVGHGLSAAGIVELIATLLQMRAGRL 367 (415)
T ss_pred CCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCC-CCEECCCHHHHHCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 97812307798148767676999999999970899-8675864432035799999999999999843950
No 69
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.47 E-value=4.6e-12 Score=98.70 Aligned_cols=292 Identities=18% Similarity=0.164 Sum_probs=164.3
Q ss_pred CCCCCEEEEEEEEECCCCCCCHHHHHHHH--CCC-HHHEE--ECCCCCEEEEECC----------CCCHHHHHHHHHHHH
Q ss_conf 96662099999973588613888999880--999-76831--1147508899489----------887999999999998
Q gi|254780489|r 1 MIKSSSCILGFGHAVPNQCIHNSIIERHL--NLK-LGVIE--QKTGIKYRYWAEK----------HETLTDIAIQAGDIA 65 (325)
Q Consensus 1 M~~~~~~I~g~g~~lP~~~i~n~~l~~~~--~~~-~~~i~--~~tGI~~R~~~~~----------~e~~~~la~~Aa~~a 65 (325)
|-+..+.|+|+|.--|-- .+-+++-+.+ |.+ ...|. ...+...+..... ......++..|+++|
T Consensus 8 ~grprVvITG~G~vsp~G-~~~e~~w~~L~~G~Sgi~~i~~~~~~~~~~~~ag~vd~~~~~~~~~~~~~~~~~~~aa~~A 86 (425)
T PRK06501 8 LGRPIVAVTGMGVVTSLG-QGKADNWAALTAGESGIHTITRFPTEGLRTRIAGTVDFLPESPFGASALSEALARLAAEEA 86 (425)
T ss_pred CCCCCEEEECCEEECCCC-CCHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEECCCCCHHHHCCCCHHHHHHHHHHHHH
T ss_conf 799999997555778882-8999999999749987773887886579875789788888566335479999999999999
Q ss_pred HHHCCCCCCCCCEE-----------------EEEEEE----EC----------CCCC---------CCCCCCCCCCCCCC
Q ss_conf 64301322234425-----------------884310----02----------3688---------74322112100238
Q gi|254780489|r 66 LRNANIKKDSISLT-----------------LLATST----PD----------HLLP---------PSSPLITHRLGLMQ 105 (325)
Q Consensus 66 L~~a~~~~~dId~i-----------------i~~s~t----~d----------~~~P---------~~a~~v~~~Lg~~~ 105 (325)
|+++++++.+++-- +..... ++ ...| +.+..|..++|++.
T Consensus 87 l~dagl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G 166 (425)
T PRK06501 87 LAQAGIGSGDFPGPLFLAVPPVELEWPARFELAAAVGANGPPSYDRLLRACRGGRFDALHERFLFGSIADRLADRFGTRG 166 (425)
T ss_pred HHHCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
T ss_conf 99749894556665100135543455651899999657857889999996289888843002237699999999868999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHCC-CCEEEEEEECC-C--------------CCC-------CCCCC-CCCCCCCCC
Q ss_conf 633342101231012567657887438-85058862012-2--------------444-------46222-443432544
Q gi|254780489|r 106 SGAIDLTGACAGFLYALVMADSYINSH-QKPVLIIAANL-L--------------SRR-------INLED-KDTAIIFGD 161 (325)
Q Consensus 106 ~~~~di~~~C~g~l~aL~~A~~~i~~g-~~~vLVv~~e~-~--------------S~~-------~d~~d-~~~~~lfGD 161 (325)
+++-++.+|++++.||..|.++|+.| .+.+++.++|. . |.. ..|-| ....+++|+
T Consensus 167 -p~~tvstACASg~~AI~~A~~~Ir~G~~D~~iaGG~d~~~~~~~~~~f~~~~aLs~~~d~P~~a~RPFD~~RdG~v~GE 245 (425)
T PRK06501 167 -LPITLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKASKPFSKDRDGFVMAE 245 (425)
T ss_pred -CCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCEEECC
T ss_conf -8714222627899999999999975898889993320343628888988632332078997767677888998635357
Q ss_pred CEEEEEECCCCCCCCC--CCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHH
Q ss_conf 2001122057654445--31135532136776527830698667654455655232245145434320100367898899
Q gi|254780489|r 162 AAGAVVLAPSPLKDKS--GILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLR 239 (325)
Q Consensus 162 gA~A~il~~~~~~~~~--~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~ 239 (325)
||+++||+..+..... .|+.... -.+...|.... .....++ +.+.++++++|+
T Consensus 246 Gaa~lVLE~~~~A~~RGA~I~a~i~-g~g~~~d~~~~----------------~~~~p~~--------~~~~~~~~~al~ 300 (425)
T PRK06501 246 GAGALVLESLESAVARGAKILGILA-GCGEKADSFHR----------------TRSSPDG--------SPAIGCVRAALA 300 (425)
T ss_pred CEEEEEECCHHHHHHCCCEEEEEEE-CCEECCCCCCC----------------CCCCCCH--------HHHHHHHHHHHH
T ss_conf 0799983337779868996999984-62764789888----------------7799886--------999999999999
Q ss_pred HHCCCCCCCCEEEECCCCCHHH-----HHHHHHCCCCHHHHH--HHHHHCCCCCCCHHHHHH---HHHHHHCCCC-----
Q ss_conf 7401200122463056541389-----999997197865700--218540933000599999---9999806789-----
Q gi|254780489|r 240 KSDLQPQDINRFIPHQANSRII-----QKVCEKIGLSKRIMV--NSLKDFGNSSSASIPLSL---SLENQRKPFQ----- 304 (325)
Q Consensus 240 ~~gl~~~did~~i~Hq~~~~~~-----~~~~~~lgi~~~~~~--~~l~~~GN~~sAsi~~~L---~~~~~~g~i~----- 304 (325)
+++++++||||+..|-.+-+.. +++.+.+|=...+.+ .+=..+||+..|+=.+.+ -.+++++.+.
T Consensus 301 ~Ag~~~~~i~~i~aHgtgT~~~D~~E~~ai~~~fg~~~~~~~v~s~Ks~~GH~~gaaG~~e~~~~~lal~~~~ippt~n~ 380 (425)
T PRK06501 301 DAGLTEDQIDYINAHGTSTPENDKMEYLGLSAVFGERLSSIPVSSNKSMIGHTLTAAGAVEAVFSLLTIQHGRIPPTINY 380 (425)
T ss_pred HHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 82988245137980587686767999999999863568998688953433023799999999999999813954889998
Q ss_pred -------------------CCCEEEEEEECCCCC
Q ss_conf -------------------998999998615510
Q gi|254780489|r 305 -------------------KGEKILTISCRRGND 319 (325)
Q Consensus 305 -------------------~Gd~vll~~~G~G~s 319 (325)
+-+++|.-+||-|-.
T Consensus 381 ~~~dp~~~l~~v~~~~~~~~~~~al~nsfGFGG~ 414 (425)
T PRK06501 381 DNPDPAIPLDVVPNVARDARVTAVLSNSFGFGGQ 414 (425)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCE
T ss_conf 9999999855289976578878999976147724
No 70
>PRK08041 consensus
Probab=99.47 E-value=2.1e-12 Score=100.98 Aligned_cols=98 Identities=14% Similarity=0.142 Sum_probs=83.5
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 98879999999999986430132223442588431002368874322112100238-63334210123101256765788
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLMQ-SGAIDLTGACAGFLYALVMADSY 128 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~~-~~~~di~~~C~g~l~aL~~A~~~ 128 (325)
.+.++.+|+..+++.+|++++++|++||-||++.+.+...-+..+..+.-..|++. ++++.|+..|.+++.|+..|...
T Consensus 22 ~~~~~~~L~a~~ik~~l~r~gi~~~~ID~vi~G~v~~~g~g~n~aR~~al~aGlp~~vpa~tVnr~C~SGl~Ai~~Aa~~ 101 (391)
T PRK08041 22 ARHSAVELGSLVVKALIERTGVPAYAVDEVILGQVLTAGAGQNPARQSAIKGGLPNSVSAITINDVCGSGLKALHLATQA 101 (391)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHH
T ss_conf 89999999999999999981989899898999805765656659999999769998887178751656878999999999
Q ss_pred HHCCC-CEEEEEEECCCCCC
Q ss_conf 74388-50588620122444
Q gi|254780489|r 129 INSHQ-KPVLIIAANLLSRR 147 (325)
Q Consensus 129 i~~g~-~~vLVv~~e~~S~~ 147 (325)
|++|. +-+++.+.|.+|+.
T Consensus 102 I~~G~~dvvlagGvEsmS~~ 121 (391)
T PRK08041 102 IQCGEADIVIAGGQENMSRA 121 (391)
T ss_pred HHCCCCCEEEEEEEECCCCC
T ss_conf 86799766777412214658
No 71
>PRK08371 consensus
Probab=99.47 E-value=1.7e-12 Score=101.52 Aligned_cols=199 Identities=20% Similarity=0.272 Sum_probs=127.8
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 887999999999998643013222344258843100236--887432211210023863334210123101256765788
Q gi|254780489|r 51 HETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHL--LPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSY 128 (325)
Q Consensus 51 ~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~--~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~ 128 (325)
+.+..+|+.+|+++||++++++ +||-+++++..+... ....+..++..+|+++.++..++.+|++++.++..|...
T Consensus 19 ~~~~~~L~~ea~~~Al~dAgi~--~iD~v~~g~~~~~~~~~~~~~~~~~a~~~Gl~~vp~~~v~~~caSg~~Ai~~Aa~~ 96 (388)
T PRK08371 19 RTSLRDLAVEAILKAMDDAGID--KVDSLYVGNMASGSFIEQENLGALIADWAGLGNIPAVKVEAACASGGAAVQEGAKA 96 (388)
T ss_pred CCCHHHHHHHHHHHHHHHCCCC--HHHEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf 9898999999999999980998--33348991356542221323999999975999986246667357899999999999
Q ss_pred HHCC-CCEEEEEEECCCCCCCCCC---------CCC--------------------------------------------
Q ss_conf 7438-8505886201224444622---------244--------------------------------------------
Q gi|254780489|r 129 INSH-QKPVLIIAANLLSRRINLE---------DKD-------------------------------------------- 154 (325)
Q Consensus 129 i~~g-~~~vLVv~~e~~S~~~d~~---------d~~-------------------------------------------- 154 (325)
|++| .+.+|+++.|.+|...... |..
T Consensus 97 I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~al~a~~~~~~yg~t~e~~a~vav~~~~~A~~ 176 (388)
T PRK08371 97 VLSGLEDVVLVVGVEKMTDAWPSDATRYLAYAADAEWELFHGASFVALNALIMRLYMNTYGYTEEDLALFAVNAHANGAK 176 (388)
T ss_pred HHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHH
T ss_conf 98288988999867534678887530001245444402104837777899999999999589988837999967076760
Q ss_pred ----------------------------CCCCCCCCEEEEEECCCCCCCCCCCE---EEEEEECCCCCCEEEEECCCCCC
Q ss_conf ----------------------------34325442001122057654445311---35532136776527830698667
Q gi|254780489|r 155 ----------------------------TAIIFGDAAGAVVLAPSPLKDKSGIL---GIELTSDGSKYDLIKIPTGGSTS 203 (325)
Q Consensus 155 ----------------------------~~~lfGDgA~A~il~~~~~~~~~~il---~~~~~s~~~~~~~~~~~~~~~~~ 203 (325)
.+-...|||+|+||..++...+.++- .......+...+
T Consensus 177 np~A~~~~~~t~e~~~~s~~i~~pl~~~d~s~~~DGAaAvvl~s~e~A~~~g~~~~~~v~~~g~g~~~~----------- 245 (388)
T PRK08371 177 NPYAMFKRPITVETVMKSPYIADPLKLFDASPVCDGAAAVIITSPEKAKELGVPKDKWVEVAGMGRAID----------- 245 (388)
T ss_pred CCCCCCCCCCCHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHCCHHHHHHCCCCCCEEEEEEEEEECCC-----------
T ss_conf 975603688658896147754571666346877560687762389999865999652899999985356-----------
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHH
Q ss_conf 6544556552322451454343201003678988997401200122463056541389999997197865
Q gi|254780489|r 204 PAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKR 273 (325)
Q Consensus 204 ~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~ 273 (325)
+......... . ........++++|+++|++++|||.+=+|-+-....-...+.||+.+.
T Consensus 246 ~~~~~~~~d~---------~--~~~~~~~A~~~al~~AGl~~~DIDv~Ei~daFa~~~l~~le~lGl~~~ 304 (388)
T PRK08371 246 TINLANREDL---------L--TLKAAKIAAEKAYKMAGVEPKDIDFFEVHDAFTVMAALSLEALGVAEK 304 (388)
T ss_pred CCCCCCCCCC---------C--CCCHHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHCCCCCC
T ss_conf 5555667633---------3--464599999999998499988894775314335889999998499978
No 72
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.47 E-value=3.9e-12 Score=99.18 Aligned_cols=98 Identities=15% Similarity=0.095 Sum_probs=80.9
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECC-CCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 988799999999999864301322234425884310023-6887432211210023-86333421012310125676578
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDH-LLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADS 127 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~-~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~ 127 (325)
.+.++.+|+..+++.+|++++++|++||-||++.+.+-. .-...+..+.-.-|++ .++++.|+..|.+++.|+..|.+
T Consensus 24 ~~~~~~~L~a~~i~~~l~r~~i~~~~Id~vi~G~v~~~g~~g~n~aR~~al~aGlp~~vpa~TVnr~C~SGl~Ai~~Aa~ 103 (402)
T PRK08242 24 HEVKPVRLAAGLLNALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQINRFCASGLEAVNLAAA 103 (402)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHH
T ss_conf 98989999999999999870989899997999807765544577999999976999888647884505578999999999
Q ss_pred HHHCCC-CEEEEEEECCCCCC
Q ss_conf 874388-50588620122444
Q gi|254780489|r 128 YINSHQ-KPVLIIAANLLSRR 147 (325)
Q Consensus 128 ~i~~g~-~~vLVv~~e~~S~~ 147 (325)
.|++|. ..++..+.|.+|+.
T Consensus 104 ~I~~G~~dv~iAGGvEsmS~~ 124 (402)
T PRK08242 104 KVRSGWDDLVIAGGVESMSRV 124 (402)
T ss_pred HHHCCCCCEEEECCCCCCCCC
T ss_conf 996699888997661345657
No 73
>PRK07124 consensus
Probab=99.45 E-value=1.2e-12 Score=102.45 Aligned_cols=98 Identities=16% Similarity=0.107 Sum_probs=85.9
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9887999999999998643013222344258843100236887432211210023-863334210123101256765788
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADSY 128 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~~ 128 (325)
.+.++.+|+.++++++|++++++|++||.|+++++.+....+..+..+.-..|++ .++++.|+.+|++++.|+.+|...
T Consensus 22 ~~~~~~~L~~~ai~~al~~~~i~~~~Id~vi~G~v~~~g~g~n~ar~~al~aGlp~~iP~~tV~~aCaSG~~Ai~~A~~~ 101 (402)
T PRK07124 22 KSVPAGELAGVAIKGALEQAKVSPEAIDEVIVGNVVSAGQGMGPGRQAAIFAGIPEEVPAYSLNMVCGSGMKTVMDAVSH 101 (402)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHH
T ss_conf 89999999999999999983989899998999934755556679999999769998885699725778999999999999
Q ss_pred HHCC-CCEEEEEEECCCCCC
Q ss_conf 7438-850588620122444
Q gi|254780489|r 129 INSH-QKPVLIIAANLLSRR 147 (325)
Q Consensus 129 i~~g-~~~vLVv~~e~~S~~ 147 (325)
|++| ..-+|+++.|.+|+.
T Consensus 102 I~sG~~dvvlagGvEsmS~~ 121 (402)
T PRK07124 102 IKAGDAEVVVAAGVEVMSQI 121 (402)
T ss_pred HHCCCCCEEEECCEECCCCC
T ss_conf 86799767896551015667
No 74
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=99.44 E-value=3.7e-12 Score=99.34 Aligned_cols=98 Identities=17% Similarity=0.118 Sum_probs=81.4
Q ss_pred CCCCHHHHHHHHHHHHHHHC-CCCCCCCCEEEEEEEEECC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 98879999999999986430-1322234425884310023-688743221121002386333421012310125676578
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNA-NIKKDSISLTLLATSTPDH-LLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADS 127 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a-~~~~~dId~ii~~s~t~d~-~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~ 127 (325)
.+.++.+|+..+++.+|++. +++|++||-||.+.+.+.. .-...+..+.-..|++.++++.|+..|.+++.|+..|.+
T Consensus 23 ~~~~~~~L~a~~i~~~l~r~~~l~p~~Id~Vi~G~~~~~g~~g~n~aR~aaL~aGl~~vpa~TVnr~C~SGl~Ai~~aa~ 102 (405)
T PRK07851 23 VDMRPDDLAAQMVRAALDKVPALDPHDIDDLMLGCGLPGGESGFNIARVVAVLLGYDFLPGTTVNRYCSSSLQTTRMAFH 102 (405)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHH
T ss_conf 99999999999999999866797989989899983775464323099999997399998634575602057999999999
Q ss_pred HHHCCC-CEEEEEEECCCCCC
Q ss_conf 874388-50588620122444
Q gi|254780489|r 128 YINSHQ-KPVLIIAANLLSRR 147 (325)
Q Consensus 128 ~i~~g~-~~vLVv~~e~~S~~ 147 (325)
.|++|. .-+++.+.|.+|+.
T Consensus 103 ~I~~G~~dvvlAGGvEsMS~~ 123 (405)
T PRK07851 103 AIKAGEGDAFISAGVETVSRF 123 (405)
T ss_pred HHHCCCCCEEEEECCCCCCCC
T ss_conf 997699998999681715567
No 75
>PRK07855 lipid-transfer protein; Provisional
Probab=99.43 E-value=3.5e-11 Score=92.91 Aligned_cols=263 Identities=16% Similarity=0.129 Sum_probs=149.1
Q ss_pred CCCCCEEEEEEEEECCCCCCCHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf 96662099999973588613888999880999768311147508899489887999999999998643013222344258
Q gi|254780489|r 1 MIKSSSCILGFGHAVPNQCIHNSIIERHLNLKLGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTL 80 (325)
Q Consensus 1 M~~~~~~I~g~g~~lP~~~i~n~~l~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii 80 (325)
||+.++.|+|+|.. |-. | .++.+..+|+.+|+++||++||++++|||-++
T Consensus 1 ~m~~~vAIvGvG~t-~f~--------------------------r---~~~~s~~~L~~eA~~~AL~DAGl~~~dIDg~~ 50 (386)
T PRK07855 1 MLSGKAAIVGIGAT-EFS--------------------------K---NSGRSELRLACEAVLAALDDAGLAPSDVDGLV 50 (386)
T ss_pred CCCCCEEEEEEEEE-CCE--------------------------E---CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEE
T ss_conf 98998899975530-224--------------------------6---89989999999999999997599999969998
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHCC-CCEEEEEEECCCCC------------
Q ss_conf 84310023688743221121002386333-42101231012567657887438-85058862012244------------
Q gi|254780489|r 81 LATSTPDHLLPPSSPLITHRLGLMQSGAI-DLTGACAGFLYALVMADSYINSH-QKPVLIIAANLLSR------------ 146 (325)
Q Consensus 81 ~~s~t~d~~~P~~a~~v~~~Lg~~~~~~~-di~~~C~g~l~aL~~A~~~i~~g-~~~vLVv~~e~~S~------------ 146 (325)
+.+... .| ...+.+.+|+.....+ .+..+|+++..++..|...|++| .+.+|++.++....
T Consensus 51 ~~~~~~---~~--~~~ia~~lG~~~~~~~~~v~~~g~s~~~~~~~A~~aIasG~~d~vl~~~~~~~~~~~~~~~~~~~~~ 125 (386)
T PRK07855 51 TFTMDT---NP--EIAVARAVGIGELKFFSQIGYGGGAACATVQQAAMAVATGVADVVVAYRAFNERSGMRFGQVQTGLA 125 (386)
T ss_pred EEECCC---CC--HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCC
T ss_conf 960788---82--8999997199887532214788557999999999999738777899997414676322366755555
Q ss_pred -------------------------------C-----------------------CCCC----CC-CC------------
Q ss_conf -------------------------------4-----------------------4622----24-43------------
Q gi|254780489|r 147 -------------------------------R-----------------------INLE----DK-DT------------ 155 (325)
Q Consensus 147 -------------------------------~-----------------------~d~~----d~-~~------------ 155 (325)
+ .||. ++ .|
T Consensus 126 ~~~~~~~~~~~~~~p~G~~~p~~~~Al~a~rym~~yG~t~E~lA~Vavknr~nA~~NP~A~~~~~~iT~edvl~S~~Ia~ 205 (386)
T PRK07855 126 TNPTSEGVDYGWSYPHGLLTPAAWVAMIARRYMHEYGATSEDFGRVAVADRKHAATNPKAFFYGKPITLEDHQNSRWIAE 205 (386)
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHCCCCCCC
T ss_conf 55332333311002346776688999999999999795999999999999998741959887378988999851667166
Q ss_pred ------CCCCCCCEEEEEECCCCCCCCCC-----CEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf ------43254420011220576544453-----1135532136776527830698667654455655232245145434
Q gi|254780489|r 156 ------AIIFGDAAGAVVLAPSPLKDKSG-----ILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFY 224 (325)
Q Consensus 156 ------~~lfGDgA~A~il~~~~~~~~~~-----il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~ 224 (325)
+-..+|||+|+||..++...+.+ |......+...+. ......++ ++.
T Consensus 206 PL~lldc~~~sDGAaAvVl~s~e~A~~~~~~pv~i~~~~~g~~~~~~------------~~~~~~~~---------d~~- 263 (386)
T PRK07855 206 PLRLLDCCQETDGAVAIVVTSAERARDLKQRPAVIEAAAQGSGADQY------------TMTSYYRD---------DLT- 263 (386)
T ss_pred CCHHHHCCCCCCCEEEEEEECHHHHHHCCCCCEEEEEEEEEECCCCC------------CCCCCCCC---------CCC-
T ss_conf 54575538878843899994499997568997799999987136765------------54433456---------444-
Q ss_pred HHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHH----------------HHHHH----HHHCCC
Q ss_conf 3201003678988997401200122463056541389999997197865----------------70021----854093
Q gi|254780489|r 225 NAVKIMAQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKR----------------IMVNS----LKDFGN 284 (325)
Q Consensus 225 ~~~~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~----------------~~~~~----l~~~GN 284 (325)
..+......+++++++|++++|||.+-+|-.-...--...|.||+-+. +++.| +---||
T Consensus 264 -~~~~~~~aa~~ay~~AGi~p~DiDv~e~~D~Ft~~el~~lE~lG~c~~Ge~~~~v~~G~~~~~G~~PvN~sGGlls~gh 342 (386)
T PRK07855 264 -GLPEMGLVARQLWRQSGLGPADIQTAILYDHFTPFVLMQLEELGFCGRGEAKDFIADGAIEIGGRLPINTHGGQLGEAY 342 (386)
T ss_pred -CCCHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHCCCC
T ss_conf -5627999999999984999788726763067709999999984998898379999779955799714658970014676
Q ss_pred CCCCHHHHHHHHHHHH------CCCCCCCEEEEEEECCCCCCCCCCC
Q ss_conf 3000599999999980------6789998999998615510201019
Q gi|254780489|r 285 SSSASIPLSLSLENQR------KPFQKGEKILTISCRRGNDRGIYCL 325 (325)
Q Consensus 285 ~~sAsi~~~L~~~~~~------g~i~~Gd~vll~~~G~G~s~ga~lL 325 (325)
...++- +.++.++ +++ +|-++.|+.-+.|.....++|
T Consensus 343 ~~G~~g---v~Eav~QLrG~A~~QV-~~a~~alv~~~gG~~~~~~~l 385 (386)
T PRK07855 343 IHGMNG---IAEAVRQLRGTSVNQV-PGVEHVLVTAGTGVPTSGLIL 385 (386)
T ss_pred CCCHHH---HHHHHHHHHCCCCCCC-CCHHEEEEECCCCHHHHHHCC
T ss_conf 430778---9999999748641359-940458893898444433015
No 76
>PRK09051 beta-ketothiolase; Provisional
Probab=99.43 E-value=4.3e-12 Score=98.93 Aligned_cols=98 Identities=20% Similarity=0.160 Sum_probs=81.0
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCC-CCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 9887999999999998643013222344258843100236-887432211210023-86333421012310125676578
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHL-LPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADS 127 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~-~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~ 127 (325)
.+.++.+|+..+++.+|++++++|++||-||++.+.+... .+..+..+.-..|++ .++++.|+..|.+++.|+..|..
T Consensus 23 ~~~~~~~L~a~~i~~~l~r~~i~p~~Id~Vi~G~v~~~g~~~~niaR~aal~aGlp~~vp~~tVnr~C~SGl~Ai~~Aa~ 102 (394)
T PRK09051 23 KDFAPTDLGAIVVREALARAGVDGDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPALNVNRLCGSGLQAIVSAAQ 102 (394)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHH
T ss_conf 89988999999999999871989899897999923556766767899999976999888718871554778999999999
Q ss_pred HHHCC-CCEEEEEEECCCCCC
Q ss_conf 87438-850588620122444
Q gi|254780489|r 128 YINSH-QKPVLIIAANLLSRR 147 (325)
Q Consensus 128 ~i~~g-~~~vLVv~~e~~S~~ 147 (325)
.|++| .+.+++.+.|.+|+.
T Consensus 103 ~I~~G~~d~viAGGvEsmS~~ 123 (394)
T PRK09051 103 AILLGDADVAIGGGAESMSRA 123 (394)
T ss_pred HHHCCCCCEEEEECCHHCCCC
T ss_conf 997699887787241020358
No 77
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=99.42 E-value=1.2e-11 Score=96.02 Aligned_cols=98 Identities=13% Similarity=0.064 Sum_probs=83.2
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEC-CCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 98879999999999986430132223442588431002-36887432211210023-86333421012310125676578
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPD-HLLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADS 127 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d-~~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~ 127 (325)
.+.++.+|+..+++.+|++++++|++||.||++.+++. ...+..+..+.-..|++ .++++.|+..|.+++.|+..|.+
T Consensus 22 ~~~~~~~L~~~a~~~~l~r~~v~~~~Id~vi~G~v~~~g~~~~n~aR~~~l~aglp~~vpa~tvn~~C~SGl~Ai~~A~~ 101 (390)
T PRK06504 22 AGWHPADLAAQVLDALVDRSGADPAQIEDVIMGCVSQAGEQAMNVARNAVLASKLPESVPGTSIDRQCGSSQQALHFAAQ 101 (390)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHH
T ss_conf 99989999999999999880989899898999917874533240999999977999767547773467858999999999
Q ss_pred HHHCC-CCEEEEEEECCCCCC
Q ss_conf 87438-850588620122444
Q gi|254780489|r 128 YINSH-QKPVLIIAANLLSRR 147 (325)
Q Consensus 128 ~i~~g-~~~vLVv~~e~~S~~ 147 (325)
.|++| ..-+|+.+.|.+|+.
T Consensus 102 ~I~sG~~dv~lagGvEsmS~~ 122 (390)
T PRK06504 102 AVMSGTMDVVIAAGVESMTRV 122 (390)
T ss_pred HHHCCCCCEEEECCEEECCCC
T ss_conf 984799677731562103689
No 78
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.42 E-value=3.5e-12 Score=99.52 Aligned_cols=98 Identities=11% Similarity=0.059 Sum_probs=78.8
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCC-CCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 98879999999999986430132223442588431002368-87432211210023-86333421012310125676578
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLL-PPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADS 127 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~-P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~ 127 (325)
.+.++.+|+..+.+.+|++++++|++||-|+++.+.+.-.. +..+..+.-.-|++ .++++.|+..|.+++.|+..|.+
T Consensus 28 ~~~~~~~L~a~~~~~~l~r~gi~~~~Id~vi~G~~~~~g~~~~~~aR~~~l~aGlp~~vpa~tVn~~CaSG~~Ai~~A~~ 107 (394)
T PRK06445 28 NDLRPEELAAVLINALIEKTGIKPEEIGDVITGCALQVGENWLYGGRHVVLLAKLPYTIPAMHVDRQCASSLTTVAIGAM 107 (394)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHH
T ss_conf 78999999999999999874989899697999647555656674889999976999888748885541689999999999
Q ss_pred HHHCC-CCEEEEEEECCCCCC
Q ss_conf 87438-850588620122444
Q gi|254780489|r 128 YINSH-QKPVLIIAANLLSRR 147 (325)
Q Consensus 128 ~i~~g-~~~vLVv~~e~~S~~ 147 (325)
.|++| ..-+|+++.|.+|+.
T Consensus 108 ~I~sG~~dvvlAgGvEsmS~~ 128 (394)
T PRK06445 108 EIATGMADIVIAGGVEHMTHT 128 (394)
T ss_pred HHHCCCCCEEEEECEECCCCC
T ss_conf 997399999999474236678
No 79
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.41 E-value=1.5e-12 Score=101.93 Aligned_cols=222 Identities=19% Similarity=0.234 Sum_probs=131.7
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCE----EEEEEEEECCC--------------C----CC-CCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999986430132223442----58843100236--------------8----87-43221121002386333421
Q gi|254780489|r 56 DIAIQAGDIALRNANIKKDSISL----TLLATSTPDHL--------------L----PP-SSPLITHRLGLMQSGAIDLT 112 (325)
Q Consensus 56 ~la~~Aa~~aL~~a~~~~~dId~----ii~~s~t~d~~--------------~----P~-~a~~v~~~Lg~~~~~~~di~ 112 (325)
-|+.+++++||++||+++++++- |+.+++..||. . ++ .|.+|...+|++. +++-|+
T Consensus 89 rl~L~~a~~Al~dAG~~~~~l~~~r~GV~vG~~~~d~~~~~~~~~~~~~~~~~~~~~~s~~a~ris~~~~l~G-p~~~vd 167 (424)
T smart00825 89 RLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLRG-PSVTVD 167 (424)
T ss_pred HHHHHHHHHHHHHCCCCHHHCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-CEEEEC
T ss_conf 9999999999997399835658874389997516637777641755578520245317689999999858999-635141
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCE-EEEEEECCC-CC----------CCC------CCC-CCCCCCCCCCEEEEEECCCCC
Q ss_conf 01231012567657887438850-588620122-44----------446------222-443432544200112205765
Q gi|254780489|r 113 GACAGFLYALVMADSYINSHQKP-VLIIAANLL-SR----------RIN------LED-KDTAIIFGDAAGAVVLAPSPL 173 (325)
Q Consensus 113 ~~C~g~l~aL~~A~~~i~~g~~~-vLVv~~e~~-S~----------~~d------~~d-~~~~~lfGDgA~A~il~~~~~ 173 (325)
.+|++++.||..|.+.|+.|... +||-+++.. +. .+. +-| ....+.+|+|++++||++-..
T Consensus 168 tACsSsl~Al~~A~~~i~~G~~D~alvGg~~~~~~p~~~~~~~~~~~lS~~g~~rpFD~~adG~v~gEGa~~lvLk~l~~ 247 (424)
T smart00825 168 TACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADADGYVRGEGVGVVVLKRLSD 247 (424)
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHH
T ss_conf 47289999999999999769963300142667348789999861578799998755778899841047657997465999
Q ss_pred C--CCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEE
Q ss_conf 4--44531135532136776527830698667654455655232245145434320100367898899740120012246
Q gi|254780489|r 174 K--DKSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQDINRF 251 (325)
Q Consensus 174 ~--~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~ 251 (325)
. ++..|.+....+ +..+| + +...+...++ ....++++++|++++++++||||+
T Consensus 248 A~~~g~~Iya~I~G~-~~~~d------G----------~~~~~~~P~~--------~~~~~~~~~Al~~a~i~p~~I~yi 302 (424)
T smart00825 248 ALRDGDPILAVIRGS-AVNQD------G----------RSNGLTAPSG--------PAQARLIRQALARAGVDPADVDYV 302 (424)
T ss_pred HHHCCCCEEEEEECE-EEECC------C----------CCCCCCCCCH--------HHHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 987699179999343-78258------9----------8787789998--------999999999999829896646879
Q ss_pred EECCCCCHH-----HHHHHHHCCCC--HHH-H-HH-HHHHCCCCCCCHHHHHHHH---HHHHCCC
Q ss_conf 305654138-----99999971978--657-0-02-1854093300059999999---9980678
Q gi|254780489|r 252 IPHQANSRI-----IQKVCEKIGLS--KRI-M-VN-SLKDFGNSSSASIPLSLSL---ENQRKPF 303 (325)
Q Consensus 252 i~Hq~~~~~-----~~~~~~~lgi~--~~~-~-~~-~l~~~GN~~sAsi~~~L~~---~~~~g~i 303 (325)
-.|-.+... .+++.+.++-. ..+ . +. +=..+||+.+|+-...+-. +++.+.+
T Consensus 303 eaHgtgt~~gD~~E~~al~~~f~~~~~~~~~~~igS~K~~~GH~~~AaG~~~lik~~lal~~~~i 367 (424)
T smart00825 303 EAHGTGTPLGDPIEAEALAAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLIKVVLALRHGTI 367 (424)
T ss_pred EECCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 96036687779999999999962368877842520453442333777899999999999856970
No 80
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.41 E-value=1.9e-11 Score=94.71 Aligned_cols=263 Identities=13% Similarity=0.146 Sum_probs=141.8
Q ss_pred CCCEEEEEEEEECCCCCCCHHHHHHHH-C-CC-----HHHEEECCCCCEEE---EEC-CC-----------CCHHHHHHH
Q ss_conf 662099999973588613888999880-9-99-----76831114750889---948-98-----------879999999
Q gi|254780489|r 3 KSSSCILGFGHAVPNQCIHNSIIERHL-N-LK-----LGVIEQKTGIKYRY---WAE-KH-----------ETLTDIAIQ 60 (325)
Q Consensus 3 ~~~~~I~g~g~~lP~~~i~n~~l~~~~-~-~~-----~~~i~~~tGI~~R~---~~~-~~-----------e~~~~la~~ 60 (325)
.+++.|+|+|.-.|.-. +-+++-+.+ . .+ ..+-.+..+...|. +.+ .+ .....++..
T Consensus 11 ~~dVaItG~g~~~p~g~-~~~efw~~L~~G~sgi~~~~~~~~~~~~~~~~~~g~~~~~fd~~~~~~~~~~~~~~~~~~~~ 89 (418)
T PRK07910 11 FPNVVVTGIAMTTALAT-DAETTWKLLLDGQSGIRTLDDPFVEEFDLPVRIGGHLLEEFDHQLTRVELRRLSYLQRMSTV 89 (418)
T ss_pred CCCEEEECCEEECCCCC-CHHHHHHHHHCCCCCEEECCCCCCHHCCCCCEEEEEECCCCCCCCCHHCHHHHHHHHHHHHH
T ss_conf 98999977787898959-99999999973898767478422001389612733656676655780268763599999999
Q ss_pred HHHHHHHHCC---CCCCCCCEEEEEEEEE----------------CCCC--------C-CCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999864301---3222344258843100----------------2368--------8-743221121002386333421
Q gi|254780489|r 61 AGDIALRNAN---IKKDSISLTLLATSTP----------------DHLL--------P-PSSPLITHRLGLMQSGAIDLT 112 (325)
Q Consensus 61 Aa~~aL~~a~---~~~~dId~ii~~s~t~----------------d~~~--------P-~~a~~v~~~Lg~~~~~~~di~ 112 (325)
++++|++++| ++++.+..++..+... .... | ..+..+...++++. +++-+.
T Consensus 90 ~~~~a~edaG~~~~~~~r~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~G-p~~t~~ 168 (418)
T PRK07910 90 LGRRVWENAGSPEVDTNRLMVSIGTGLGSAEELVFSYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAKA-GVITPV 168 (418)
T ss_pred HHHHHHHHCCCCCCCHHHCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCC
T ss_conf 9999999779998882250179887315558899999999854856558778999866379999999828978-855530
Q ss_pred CCCCCCHHHHHHHHHHHHCCC-CEEEEEEECCC-CCC----------------------CCCCC-CCCCCCCCCCEEEEE
Q ss_conf 012310125676578874388-50588620122-444----------------------46222-443432544200112
Q gi|254780489|r 113 GACAGFLYALVMADSYINSHQ-KPVLIIAANLL-SRR----------------------INLED-KDTAIIFGDAAGAVV 167 (325)
Q Consensus 113 ~~C~g~l~aL~~A~~~i~~g~-~~vLVv~~e~~-S~~----------------------~d~~d-~~~~~lfGDgA~A~i 167 (325)
.+|++++.||..|.+.|+.|. +.+++-++|.. +.. ..|-| ....+++|+||+++|
T Consensus 169 tACsSs~~Ai~~A~~~I~~G~~d~ai~GG~~~~l~~~~~~~f~~l~~~~s~~~~~p~~~~rPFD~~rdG~v~gEGag~lv 248 (418)
T PRK07910 169 SACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDRDGFVFGEGGALMV 248 (418)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCEEEEE
T ss_conf 53234889999999999809988899545221268177899999777744588998877686556789864048248888
Q ss_pred ECCCCCCCC--CCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCC
Q ss_conf 205765444--531135532136776527830698667654455655232245145434320100367898899740120
Q gi|254780489|r 168 LAPSPLKDK--SGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQP 245 (325)
Q Consensus 168 l~~~~~~~~--~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~ 245 (325)
|++.+.... ..|... +...+..+|...+ .....++ ....++++++|+++|+++
T Consensus 249 Le~l~~A~~rGa~I~a~-i~G~g~~~Dg~~~----------------~~p~p~g--------~~~~~am~~Al~~agl~p 303 (418)
T PRK07910 249 IETEEHAKARGANILAR-IMGASITSDGYHM----------------VAPDPNG--------ERAGHAMTRAIQLAGLTP 303 (418)
T ss_pred EECHHHHHHCCCEEEEE-EEEEEECCCCCCC----------------CCCCCCC--------HHHHHHHHHHHHHHCCCC
T ss_conf 50254566369857899-8513645888887----------------5789980--------789999999999828995
Q ss_pred CCCCEEEECCCCCHH-----HHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHH
Q ss_conf 012246305654138-----99999971978657002185409330005999
Q gi|254780489|r 246 QDINRFIPHQANSRI-----IQKVCEKIGLSKRIMVNSLKDFGNSSSASIPL 292 (325)
Q Consensus 246 ~did~~i~Hq~~~~~-----~~~~~~~lgi~~~~~~~~l~~~GN~~sAsi~~ 292 (325)
+||||+-.|-.+-+. .+++.+.++=..-.+..+=..+||+-+|+=.+
T Consensus 304 ~~IdyI~aHGTgT~~gD~~E~~Ai~~vfg~~~~~v~S~Ks~iGH~~~AaG~~ 355 (418)
T PRK07910 304 TDIDHVNAHATGTSVGDVAEGRAINNALGGHRPAVYAPKSALGHSVGAVGAV 355 (418)
T ss_pred CCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEECCHHHHHCCHHHHHHH
T ss_conf 3407799567778766999999999986699984128124342038999999
No 81
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.41 E-value=7.1e-12 Score=97.49 Aligned_cols=98 Identities=12% Similarity=0.125 Sum_probs=80.4
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECC-CCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 988799999999999864301322234425884310023-6887432211210023-86333421012310125676578
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDH-LLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADS 127 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~-~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~ 127 (325)
.+.++.+|+..+++.+|++++++|++||-||++.+.+.- .-+..+..++-.-|++ .++++.|+..|.+++.|+.+|.+
T Consensus 23 ~~~~~~eL~a~~i~~~l~r~gi~~~~Id~Vi~G~v~~~g~~g~n~aR~aaL~aGlp~~vpa~tVnr~C~SGl~Ai~~Aa~ 102 (392)
T PRK07108 23 NMTHGATLGGHVVAAAVERAKLDPARVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTVNRFCSSGLQTIALAAQ 102 (392)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHH
T ss_conf 89999999999999999870989899998999946655655577999999966999888627775745553899999987
Q ss_pred HHHCCC-CEEEEEEECCCCCC
Q ss_conf 874388-50588620122444
Q gi|254780489|r 128 YINSHQ-KPVLIIAANLLSRR 147 (325)
Q Consensus 128 ~i~~g~-~~vLVv~~e~~S~~ 147 (325)
.|++|. .-++..+.|.+|..
T Consensus 103 ~I~~G~~dv~iAGGvEsmS~~ 123 (392)
T PRK07108 103 RIIAGEGDVFVAGGVESISCV 123 (392)
T ss_pred HHHCCCCCEEEEECEECCCCC
T ss_conf 863899986788045114557
No 82
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.41 E-value=1.1e-11 Score=96.17 Aligned_cols=98 Identities=15% Similarity=0.183 Sum_probs=84.3
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9887999999999998643013222344258843100236887432211210023-863334210123101256765788
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADSY 128 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~~ 128 (325)
.+.++.+|+..+++.+|++++++|++||-||++.+.+....|..+.++.-.-|++ .++++.|+..|.+++.|+..|...
T Consensus 22 ~~~~~~~L~a~~ik~~l~r~~i~~~~Id~Vi~G~~~~~g~~~~~aR~aaL~aGlp~~vpa~tVnr~C~SGl~Ai~~Aa~~ 101 (404)
T PRK06205 22 KPVPAEELAATVLRALVERTGIDPARVDDVIFGQCYPNGEAPAIGRVAALDAGLPVTVPGMQLDRRCGSGLQAVITAAMQ 101 (404)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHH
T ss_conf 99988999999999999981989899897999942656767779999999779898875588815053327899999999
Q ss_pred HHCCC-CEEEEEEECCCCCC
Q ss_conf 74388-50588620122444
Q gi|254780489|r 129 INSHQ-KPVLIIAANLLSRR 147 (325)
Q Consensus 129 i~~g~-~~vLVv~~e~~S~~ 147 (325)
|++|. +-+++.+.|.+|+.
T Consensus 102 I~sG~~dvviaGGvEsmS~~ 121 (404)
T PRK06205 102 VQTGAADVVIAGGAESMSNV 121 (404)
T ss_pred HHCCCCCEEEECCCCCCCCC
T ss_conf 96499777874142124668
No 83
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=99.41 E-value=3.8e-12 Score=99.29 Aligned_cols=98 Identities=16% Similarity=0.080 Sum_probs=80.9
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCC-CCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 9887999999999998643013222344258843100236-887432211210023-86333421012310125676578
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHL-LPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADS 127 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~-~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~ 127 (325)
.+.++.+|+..+++.+|++++++|++||-|+++.+.+... .+..+..+.-.-|++ .++++.|+..|.+++.|+..|.+
T Consensus 22 ~~~~~~~L~a~~i~~~l~r~~i~~~~Id~vi~G~v~~~g~~~~n~aR~~al~aGlp~~vp~~tVnr~CaSGl~Ai~~Aa~ 101 (401)
T PRK08131 22 ASVRPDDLAATVIRRLVEKSGFAGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVNRLCASGLSAVIDAAR 101 (401)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHH
T ss_conf 99988999999999999972989899898999814665654466999999966999888716875253578999999999
Q ss_pred HHHCCC-CEEEEEEECCCCCC
Q ss_conf 874388-50588620122444
Q gi|254780489|r 128 YINSHQ-KPVLIIAANLLSRR 147 (325)
Q Consensus 128 ~i~~g~-~~vLVv~~e~~S~~ 147 (325)
.|++|. .-+++.+.|.+|+.
T Consensus 102 ~I~~G~~dvvlagGvEsMS~~ 122 (401)
T PRK08131 102 AITCGEGDLYLAGGVESMSRA 122 (401)
T ss_pred HHHCCCCCEEEEEEEECCCCC
T ss_conf 985799772588506503546
No 84
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.40 E-value=1.7e-11 Score=94.97 Aligned_cols=240 Identities=20% Similarity=0.182 Sum_probs=138.1
Q ss_pred HHHHHHHHHHHHHHHCCCCCC------CCCEEEEEEEEEC-----------------CCC------C-CCCCCCCCCCCC
Q ss_conf 999999999998643013222------3442588431002-----------------368------8-743221121002
Q gi|254780489|r 54 LTDIAIQAGDIALRNANIKKD------SISLTLLATSTPD-----------------HLL------P-PSSPLITHRLGL 103 (325)
Q Consensus 54 ~~~la~~Aa~~aL~~a~~~~~------dId~ii~~s~t~d-----------------~~~------P-~~a~~v~~~Lg~ 103 (325)
..-|+..|+++||++||+++. .+. +++++...+ +.. | ..+..+...++.
T Consensus 72 ~~~~~l~aa~~Al~dAGl~~~~~~~~~r~g-v~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~ 150 (407)
T cd00828 72 TTLLALVATEEALADAGITDPYEVHPSEVG-VVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHCCCCCEE-EEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHCC
T ss_conf 999999999999996799964552787669-9999677438889988776554058732502301422488999998587
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHCCC-CEEEEEEECCCCCC---------------------CCCCC-CCCCCCCC
Q ss_conf 386333421012310125676578874388-50588620122444---------------------46222-44343254
Q gi|254780489|r 104 MQSGAIDLTGACAGFLYALVMADSYINSHQ-KPVLIIAANLLSRR---------------------INLED-KDTAIIFG 160 (325)
Q Consensus 104 ~~~~~~di~~~C~g~l~aL~~A~~~i~~g~-~~vLVv~~e~~S~~---------------------~d~~d-~~~~~lfG 160 (325)
.+-+++-++.+|++++.||..|.++|+.|. +.++|.++|.++.. ..|-| +...++.|
T Consensus 151 ~~Gp~~tv~tACaSsl~Ai~~A~~~I~~G~~d~aivGg~~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~rdG~v~g 230 (407)
T cd00828 151 SHGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDETRDGFVEA 230 (407)
T ss_pred CCCCCCCEECHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEEC
T ss_conf 88985265035079999999996662368514466431223563667999874454227899887513036678986834
Q ss_pred CCEEEEEECCCCCCCCC--CCEEEE----EEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHH
Q ss_conf 42001122057654445--311355----321367765278306986676544556552322451454343201003678
Q gi|254780489|r 161 DAAGAVVLAPSPLKDKS--GILGIE----LTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSA 234 (325)
Q Consensus 161 DgA~A~il~~~~~~~~~--~il~~~----~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i 234 (325)
+||+++||++.+...+. .|.... ..+|+.. .. ....+ +.+.+++
T Consensus 231 EGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~--------------------~~--~~~~~--------~~~~~~~ 280 (407)
T cd00828 231 EGAGVLVLERAELALARGAPIYGRVAGTASTTDGAG--------------------RS--VPAGG--------KGIARAI 280 (407)
T ss_pred CCCEEEEEEEHHHHHHCCCEEEEEECCEEEECCCCC--------------------CC--CCCCC--------HHHHHHH
T ss_conf 852177650486676688979996436478668988--------------------87--79862--------6789999
Q ss_pred HHHHHHHCCCCCCCCEEEECCCCCHH-----HHHHHHHCCCCHHHHH--HHHHHCCCCCCCHHHHHHHHH---HHHCCCC
Q ss_conf 98899740120012246305654138-----9999997197865700--218540933000599999999---9806789
Q gi|254780489|r 235 KQSLRKSDLQPQDINRFIPHQANSRI-----IQKVCEKIGLSKRIMV--NSLKDFGNSSSASIPLSLSLE---NQRKPFQ 304 (325)
Q Consensus 235 ~~~l~~~gl~~~did~~i~Hq~~~~~-----~~~~~~~lgi~~~~~~--~~l~~~GN~~sAsi~~~L~~~---~~~g~i~ 304 (325)
+++|++++++++||+|+-.|-.+-+. .+++.+.++-..++.+ .+=..+||+-+|+-.+.+-.. ++.+.+.
T Consensus 281 ~~Al~~A~i~~~~i~yI~aHgtgT~~gD~~E~~Al~~~f~~~~~~~~i~S~K~~~GH~~~aaG~~~li~~~l~l~~~~ip 360 (407)
T cd00828 281 RTALAKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGALQSLEHGLIP 360 (407)
T ss_pred HHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999719995456389951676866699999999998621378870445012303167899999999999998439719
Q ss_pred C--------------------------CCEEEEEEECCCCCCCCCC
Q ss_conf 9--------------------------9899999861551020101
Q gi|254780489|r 305 K--------------------------GEKILTISCRRGNDRGIYC 324 (325)
Q Consensus 305 ~--------------------------Gd~vll~~~G~G~s~ga~l 324 (325)
| -++++.-+||-|-+-..++
T Consensus 361 pt~n~~~~~p~~~~~~~~~~~~~~~~~~~~a~~nsfGfGG~Na~lv 406 (407)
T cd00828 361 PTANLDDVDPDVEHLSVVGLSRDLNLKVRAALVNAFGFGGSNAALV 406 (407)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEE
T ss_conf 9999899997656133777687688999799997835680507896
No 85
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=99.40 E-value=5.7e-12 Score=98.12 Aligned_cols=98 Identities=12% Similarity=0.070 Sum_probs=79.4
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECC-CCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 988799999999999864301322234425884310023-6887432211210023-86333421012310125676578
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDH-LLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADS 127 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~-~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~ 127 (325)
.+.++.+|+..+++.+|++++++|++||-||.+.+.+.- .-+..+...+-.-|++ .++++.|+..|.+++.|+..|..
T Consensus 22 ~~~~~~~L~a~~ik~~l~r~~l~~~~id~Vi~G~v~~~g~~g~n~aR~aaL~aGlp~~vpa~tVnr~C~Sgl~Ai~~aa~ 101 (387)
T PRK07850 22 SGLHAAELLGAVQRAVVERAGIDPGDVEQVIGGCVTQAGEQSNNITRVAWLTAGLPEHVGATTVDCQCGSAQQANHLVAG 101 (387)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHH
T ss_conf 99988999999999999872989899798999878676554568999999977999767606563511178999999999
Q ss_pred HHHCCC-CEEEEEEECCCCCC
Q ss_conf 874388-50588620122444
Q gi|254780489|r 128 YINSHQ-KPVLIIAANLLSRR 147 (325)
Q Consensus 128 ~i~~g~-~~vLVv~~e~~S~~ 147 (325)
.|++|. +-+++.+.|.+|+.
T Consensus 102 ~I~~G~~dv~iaGG~EsmS~~ 122 (387)
T PRK07850 102 LIAAGAIDVGIACGIEAMSRV 122 (387)
T ss_pred HHHCCCCCEEEEECCCCCCCC
T ss_conf 987799889998250303678
No 86
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.40 E-value=7.2e-12 Score=97.44 Aligned_cols=98 Identities=16% Similarity=0.176 Sum_probs=78.8
Q ss_pred CCCCHHHHHHHHHHHHHHHC-CCCCCCCCEEEEEEEEECC-CCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 98879999999999986430-1322234425884310023-6887432211210023-8633342101231012567657
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNA-NIKKDSISLTLLATSTPDH-LLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMAD 126 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a-~~~~~dId~ii~~s~t~d~-~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~ 126 (325)
.+.++.+|+..+++.+|+++ +++|++||-||++.+.+.- .-...+...+-.-|++ .++++.|+..|.+++.|+..|.
T Consensus 27 ~~~~~~~L~a~~i~~~l~r~~~l~~~~Id~vi~G~~~~~~~~g~n~aR~aal~aGlp~~vp~~tVnr~C~SGl~Ai~~Aa 106 (399)
T PRK09052 27 KNTRPDDLLAHVLRAAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTVNRFCASGLQAVAMAA 106 (399)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHH
T ss_conf 88998999999999999865797989989799970644565566899999997599988871578651336899999999
Q ss_pred HHHHCCC-CEEEEEEECCCCCC
Q ss_conf 8874388-50588620122444
Q gi|254780489|r 127 SYINSHQ-KPVLIIAANLLSRR 147 (325)
Q Consensus 127 ~~i~~g~-~~vLVv~~e~~S~~ 147 (325)
+.|++|. +-++..+.|.+|+.
T Consensus 107 ~~I~~G~~dvviaGG~EsMS~~ 128 (399)
T PRK09052 107 DRIRVGEADVMIAAGVESMSMV 128 (399)
T ss_pred HHHHCCCCCEEEECCCCCCCCC
T ss_conf 9986899888986152024668
No 87
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.38 E-value=1.7e-11 Score=95.09 Aligned_cols=97 Identities=15% Similarity=0.080 Sum_probs=83.6
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9887999999999998643013222344258843100236887432211210023-863334210123101256765788
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADSY 128 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~~ 128 (325)
.+.++.+|+..+.+.+|++++++|++||-||++.+.+...-+..|..++-.-|++ .++++.|+..|.+++.|+..|...
T Consensus 33 ~~~~~~~L~a~~ik~~l~r~~i~p~~Id~Vi~G~v~~~~~g~n~AR~aaL~aGlp~~vp~~TVnr~C~SGl~Ai~~Aa~~ 112 (436)
T PRK08963 33 HGVPAVDLGKMVVGELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAES 112 (436)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHH
T ss_conf 88998999999999999982989899998999836756767729999999759998886267763223568999999999
Q ss_pred HHCCC-CEEEEEEECCCCC
Q ss_conf 74388-5058862012244
Q gi|254780489|r 129 INSHQ-KPVLIIAANLLSR 146 (325)
Q Consensus 129 i~~g~-~~vLVv~~e~~S~ 146 (325)
|++|. +-++..+.|.+|+
T Consensus 113 I~~G~~dvvlaGGvEsMS~ 131 (436)
T PRK08963 113 IMAGTIDIGIAGGADSSSV 131 (436)
T ss_pred HHCCCCCEEEEECCCCCCC
T ss_conf 9749997899945122466
No 88
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=99.38 E-value=2.6e-11 Score=93.83 Aligned_cols=223 Identities=14% Similarity=0.109 Sum_probs=135.5
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 98879999999999986430132223442588431002368874322112100238633342101231012567657887
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYI 129 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i 129 (325)
++.+..+|+.+|+++||++||++++|||-+++++..+.. ....+.+.||++..+...+..+|+++..++..|...+
T Consensus 21 ~~~t~~~La~eA~~~AL~DAGl~~~DIDg~~~~~~~~~~----~~~~~~~~lGi~~~~~~~~~~gGas~~~~~~~A~~aI 96 (388)
T PRK08142 21 PDKSVAQLHAEVAKGALADAGLTLADVDGYFCAGDAPGL----GPASMVDYLGLKVRHVDSTETGGSSYLAHVGHAAQAI 96 (388)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCCC----CHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf 998999999999999999759998999999876788874----1899999709985764475463579999999999999
Q ss_pred HCC-CCEEEEEEECCCC--------------CC-----------------------------------------------
Q ss_conf 438-8505886201224--------------44-----------------------------------------------
Q gi|254780489|r 130 NSH-QKPVLIIAANLLS--------------RR----------------------------------------------- 147 (325)
Q Consensus 130 ~~g-~~~vLVv~~e~~S--------------~~----------------------------------------------- 147 (325)
++| .+.+||+.++... ..
T Consensus 97 asG~~d~vlv~~a~~~~~~~~~~~~~~~~~~~~~~~~~e~p~G~~~~~~~Al~a~rym~~yG~t~e~lA~vav~~r~~A~ 176 (388)
T PRK08142 97 AAGKCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYGPTTHNLYGMCAMRHMHEYGTTSEQLAWIKVAASHHAQ 176 (388)
T ss_pred HHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
T ss_conf 84887789999812335667775443344566764201123577469999999999999979699999999999999860
Q ss_pred CCCC----CCC------------------CCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCC
Q ss_conf 4622----244------------------343254420011220576544453113553213677652783069866765
Q gi|254780489|r 148 INLE----DKD------------------TAIIFGDAAGAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSPA 205 (325)
Q Consensus 148 ~d~~----d~~------------------~~~lfGDgA~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~ 205 (325)
.||. ++. ..-..+|||+|+||..++...+.+--...+...+... ..+.
T Consensus 177 ~NP~A~~r~~~t~edvl~s~~Ia~Pl~l~dc~~~sDGaaAvvl~s~e~a~~l~~~~v~i~g~g~~~----------~~~~ 246 (388)
T PRK08142 177 HNPHAMLRDVVTVEDVLNSPMIADPLHRLDCCVVTDGGGALIVARPEIARSLKRPLVKVLGAGEAI----------KGQM 246 (388)
T ss_pred CCCHHHCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHCCCCCEEEEEEEEEC----------CCCC
T ss_conf 494101589989788347752352222474077668618999935999976689958999999724----------7876
Q ss_pred CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHH------------
Q ss_conf 44556552322451454343201003678988997401200122463056541389999997197865------------
Q gi|254780489|r 206 GTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKR------------ 273 (325)
Q Consensus 206 ~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~------------ 273 (325)
... .+. .........+++++++|++++|||.+-+|-.-....-...+.||+-+.
T Consensus 247 ~~~-~d~-------------~~~~~~~aa~~a~~~AGi~p~DiDv~e~yD~fs~~~~~~lE~lGfc~~Ge~~~~v~~G~~ 312 (388)
T PRK08142 247 GGK-VDL-------------TYSGAAWSGPAAFAEAGVTPADIKYASIYDSFTITVLMQLEDLGFCKKGEGGKFVADGNL 312 (388)
T ss_pred CCC-CCC-------------CHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCC
T ss_conf 656-544-------------125899999999998599988874786327750889999998299788836999877990
Q ss_pred -----HHHHH----HHHCCCCCCCHHHHHHHHHHHH
Q ss_conf -----70021----8540933000599999999980
Q gi|254780489|r 274 -----IMVNS----LKDFGNSSSASIPLSLSLENQR 300 (325)
Q Consensus 274 -----~~~~~----l~~~GN~~sAsi~~~L~~~~~~ 300 (325)
+++.| +--.||.+.++-...+.++.++
T Consensus 313 ~~~~G~lPvNtsGGlls~ghp~~atG~~~~~Eav~Q 348 (388)
T PRK08142 313 ISGVGKLPFNTDGGGLCNNHPANRGGMTKVIEAVRQ 348 (388)
T ss_pred CCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHH
T ss_conf 228998025089643218986623799999999999
No 89
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=99.38 E-value=1.1e-11 Score=96.19 Aligned_cols=269 Identities=16% Similarity=0.165 Sum_probs=146.3
Q ss_pred CCEEEEEEEEECCCCCCCHHHHHHHH-CCCHH--HEEE---------C----CCCCEEEEEC-----CCCCHHHHHHHHH
Q ss_conf 62099999973588613888999880-99976--8311---------1----4750889948-----9887999999999
Q gi|254780489|r 4 SSSCILGFGHAVPNQCIHNSIIERHL-NLKLG--VIEQ---------K----TGIKYRYWAE-----KHETLTDIAIQAG 62 (325)
Q Consensus 4 ~~~~I~g~g~~lP~~~i~n~~l~~~~-~~~~~--~i~~---------~----tGI~~R~~~~-----~~e~~~~la~~Aa 62 (325)
+.+.|+|+|.-.|.-. +-+++-+.+ .-... .+.+ . .+...+.... .-+....|+..|+
T Consensus 1 rRVvItG~g~~~P~g~-~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~v~~f~~~~~~~~~~~~~~d~~~~~~l~aa 79 (399)
T cd00832 1 RRAVVTGIGVVAPNGL-GVEEYWKAVLDGRSGLGPITRFDPSGYPARLAGEVPDFDAAEHLPGRLLPQTDRMTRLALAAA 79 (399)
T ss_pred CCEEEECCEEECCCCC-CHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEECCCCCHHHCCCHHHHHHCCHHHHHHHHHH
T ss_conf 9299971677897959-999999999729983542775575568776456779878011689889874699999999999
Q ss_pred HHHHHHCCCCCCCCCE----EEEEEEEECC-----------------CCCC---------CCCCCCCCCCCCCCCCCCCC
Q ss_conf 9986430132223442----5884310023-----------------6887---------43221121002386333421
Q gi|254780489|r 63 DIALRNANIKKDSISL----TLLATSTPDH-----------------LLPP---------SSPLITHRLGLMQSGAIDLT 112 (325)
Q Consensus 63 ~~aL~~a~~~~~dId~----ii~~s~t~d~-----------------~~P~---------~a~~v~~~Lg~~~~~~~di~ 112 (325)
++||+++|+++++++- |+.++....+ ..|. .+.+|...+|++. +++-+.
T Consensus 80 ~~Al~dAGl~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~gl~G-p~~tv~ 158 (399)
T cd00832 80 DWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGMRG-PSGVVV 158 (399)
T ss_pred HHHHHHCCCCHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC-CCCCHH
T ss_conf 9988860998456487742899942567602558999999741854256112135667788889999828988-741021
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCEEEEEEECCC---------------CCCCC------CCC-CCCCCCCCCCEEEEEECC
Q ss_conf 01231012567657887438850588620122---------------44446------222-443432544200112205
Q gi|254780489|r 113 GACAGFLYALVMADSYINSHQKPVLIIAANLL---------------SRRIN------LED-KDTAIIFGDAAGAVVLAP 170 (325)
Q Consensus 113 ~~C~g~l~aL~~A~~~i~~g~~~vLVv~~e~~---------------S~~~d------~~d-~~~~~lfGDgA~A~il~~ 170 (325)
.+|++++.|+..|..+|+.|...+++.++|.. |..-+ |-| ....+++|+||+++||++
T Consensus 159 tacsssl~Ai~~A~~~i~~G~d~~i~Gg~~~~l~p~~~~~~~~~g~ls~~~~p~~~~rPFD~~r~G~v~GEGa~~lvLe~ 238 (399)
T cd00832 159 AEQAGGLDALAQARRLVRRGTPLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAAAGYVPGEGGAILVLED 238 (399)
T ss_pred CCCCHHHHHHHHHHHHHHCCCCHHHCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCEEEEEECC
T ss_conf 14707999999999998769720121774045162889999875664569999865047767898066427667888454
Q ss_pred CCCCCC--CCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
Q ss_conf 765444--531135532136776527830698667654455655232245145434320100367898899740120012
Q gi|254780489|r 171 SPLKDK--SGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQDI 248 (325)
Q Consensus 171 ~~~~~~--~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~di 248 (325)
.+.... ..|.+.... .+...+. ... ..++ ..+.++++++|+++|++++||
T Consensus 239 ~~~A~~rGa~i~a~i~G-~~~~~d~------~~~-------------~~~~--------~~~~~a~~~Al~~agi~p~~I 290 (399)
T cd00832 239 AAAARERGARVYGEIAG-YAATFDP------PPG-------------SGRP--------PGLARAIRLALADAGLTPEDV 290 (399)
T ss_pred HHHHHHCCCEEEEEEEE-EEECCCC------CCC-------------CCCH--------HHHHHHHHHHHHHHCCCCCEE
T ss_conf 98898788959999988-8984899------899-------------9897--------999999999999719996705
Q ss_pred CEEEECCCCCHH-----HHHHHHHCCCCHHHHH--HHHHHCCCCCCCHHHHHHHH---HHHHCCCC
Q ss_conf 246305654138-----9999997197865700--21854093300059999999---99806789
Q gi|254780489|r 249 NRFIPHQANSRI-----IQKVCEKIGLSKRIMV--NSLKDFGNSSSASIPLSLSL---ENQRKPFQ 304 (325)
Q Consensus 249 d~~i~Hq~~~~~-----~~~~~~~lgi~~~~~~--~~l~~~GN~~sAsi~~~L~~---~~~~g~i~ 304 (325)
||+-.|--+-.. .+++.+.++ +++.+ .+=..+||+-+|+=.+.+-. +++++.+.
T Consensus 291 ~yI~aHgTGT~~gD~~E~~Ai~~~fg--~~~~pv~S~K~~iGH~~~AaG~~~~i~~ll~l~~g~ip 354 (399)
T cd00832 291 DVVFADAAGVPELDRAEAAALAAVFG--PRGVPVTAPKTMTGRLYAGGAPLDVATALLALRDGVIP 354 (399)
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHC--CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 69998337585569999999999966--99987899542211069999999999999998359619
No 90
>PRK08234 consensus
Probab=99.38 E-value=1.1e-11 Score=96.15 Aligned_cols=98 Identities=12% Similarity=0.127 Sum_probs=81.9
Q ss_pred CCCCHHHHHHHHHHHHHHH-CCCCCCCCCEEEEEEEEECC-CCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 9887999999999998643-01322234425884310023-6887432211210023-8633342101231012567657
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRN-ANIKKDSISLTLLATSTPDH-LLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMAD 126 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~-a~~~~~dId~ii~~s~t~d~-~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~ 126 (325)
.+.++.+|+..+++.+|++ ++++|++||-||++.+.+.. ..+..+..++-.-|++ .++++.|+..|.++++|+..|.
T Consensus 22 ~~~~~~~L~a~~i~~~l~r~~~~~~~~Id~vi~G~v~~~g~~~~n~aR~aaL~aGlp~~vpa~tVnr~C~SGl~Ai~~Aa 101 (400)
T PRK08234 22 RDVRPDDLAAVVIRALIERNPNVPVEQIDDVVFGNANQAGEDNRNVARMAALLAGLPVEVAGVTVNRLCGSGLDAVAYAA 101 (400)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHH
T ss_conf 88988999999999999746896989989899990676564446699999997699988861677153035999999999
Q ss_pred HHHHCCC-CEEEEEEECCCCCC
Q ss_conf 8874388-50588620122444
Q gi|254780489|r 127 SYINSHQ-KPVLIIAANLLSRR 147 (325)
Q Consensus 127 ~~i~~g~-~~vLVv~~e~~S~~ 147 (325)
..|++|. .-+++.+.|.+|+.
T Consensus 102 ~~I~~G~~dvviagGvEsmS~~ 123 (400)
T PRK08234 102 RAIWAGEGEIMIAGGTESMTRA 123 (400)
T ss_pred HHHHCCCCCEEEECCCCCCCCC
T ss_conf 9985899757885152443436
No 91
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.37 E-value=6.1e-11 Score=91.38 Aligned_cols=254 Identities=17% Similarity=0.178 Sum_probs=138.8
Q ss_pred CCCCCEEEEEEEEECCCCCCCHHHHHHHH--CCCH-HHEEECCCCCEE-E---EECC------------CCCHHHHHHHH
Q ss_conf 96662099999973588613888999880--9997-683111475088-9---9489------------88799999999
Q gi|254780489|r 1 MIKSSSCILGFGHAVPNQCIHNSIIERHL--NLKL-GVIEQKTGIKYR-Y---WAEK------------HETLTDIAIQA 61 (325)
Q Consensus 1 M~~~~~~I~g~g~~lP~~~i~n~~l~~~~--~~~~-~~i~~~tGI~~R-~---~~~~------------~e~~~~la~~A 61 (325)
||+ .+.|+|+|.--|-- .+-+++-+.+ |... ..+.+....... + +.++ +.....++..|
T Consensus 1 Mm~-rVvITGiGivsplG-~~~~~~w~~L~~G~s~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~~l~~~~~R~~~~a~~A 78 (395)
T PRK09185 1 MMT-PVYITAFGATSALG-AGLDAILAALRAGRASGMRPCDFGWLPLPTWVGEVDGVDLPALPAALADFDCRNNRLALLA 78 (395)
T ss_pred CCC-CEEEECHHHCCCCC-CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHCCHHHHHHHHH
T ss_conf 998-69994620048780-8999999999848987646766665578822787468554437277763235777999999
Q ss_pred HHHHHHHCC-----CCCCCCCEEEEEEEE------------------E-CCCC----C-CCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999864301-----322234425884310------------------0-2368----8-743221121002386333421
Q gi|254780489|r 62 GDIALRNAN-----IKKDSISLTLLATST------------------P-DHLL----P-PSSPLITHRLGLMQSGAIDLT 112 (325)
Q Consensus 62 a~~aL~~a~-----~~~~dId~ii~~s~t------------------~-d~~~----P-~~a~~v~~~Lg~~~~~~~di~ 112 (325)
++++++..+ ++++.+.+++-.+.. | ++.. | +.+..|+..+|++. +++-++
T Consensus 79 ~~~~~~a~~~a~~~~~~~riGvviGts~gg~~~~e~~~~~~~~~~~~p~~~~~~~~~~~~~a~~Ia~~~gl~G-p~~t~~ 157 (395)
T PRK09185 79 LQQIEPAVEAAIARYGADRIGVVLGTSTSGILEGEEAYARRDPHGAFPADFHYAQQELGSPADFLRAYLGLSG-PAYTIS 157 (395)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC-CCEEEC
T ss_conf 9999999852053349876899995470118999999999723798887511000250149999999968989-632001
Q ss_pred CCCCCCHHHHHHHHHHHHCC-CCEEEEEEECCCCCC---------------CCCCC-CCCCCCCCCCEEEEEECCCCCCC
Q ss_conf 01231012567657887438-850588620122444---------------46222-44343254420011220576544
Q gi|254780489|r 113 GACAGFLYALVMADSYINSH-QKPVLIIAANLLSRR---------------INLED-KDTAIIFGDAAGAVVLAPSPLKD 175 (325)
Q Consensus 113 ~~C~g~l~aL~~A~~~i~~g-~~~vLVv~~e~~S~~---------------~d~~d-~~~~~lfGDgA~A~il~~~~~~~ 175 (325)
.+|++++.||..|.++|+.| .+.+++.++|.++.. ..|-| ....+.+|+||+++||++.....
T Consensus 158 ~ACaSg~~Ai~~A~~~I~~G~~d~~i~Gg~d~l~~~~~~~f~~~~~ls~~~~rPFd~~r~G~v~gEGa~~~vLE~~~~a~ 237 (395)
T PRK09185 158 TACSSSAKVFASARRLLEAGLCDAVIVGGVDSLCRLTLNGFNSLESLSPGPCQPFSANRDGINIGEAAAFFLLRPATRDD 237 (395)
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECEEEEEEECHHHCCC
T ss_conf 44608999999999999859988899802122455205787764224667887655799973650568999974556299
Q ss_pred CCC-CEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEC
Q ss_conf 453-1135532136776527830698667654455655232245145434320100367898899740120012246305
Q gi|254780489|r 176 KSG-ILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFIPH 254 (325)
Q Consensus 176 ~~~-il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i~H 254 (325)
... +++.-..+|+.+ +. .-..+|. -..++++++|++++++++||||+-.|
T Consensus 238 ~~~~~~G~~~~~da~~-----~~----------------~p~p~g~--------g~~~am~~Al~~a~~~~~di~yv~aH 288 (395)
T PRK09185 238 AAVLLLGVGESSDAHH-----MS----------------APHPEGL--------GARLAMQAALADAGLEAADIGYINLH 288 (395)
T ss_pred CCEEEEEEEECCCCCC-----CC----------------CCCCCHH--------HHHHHHHHHHHHCCCCCCCCCEEEEE
T ss_conf 9789999885167777-----77----------------8898889--------99999999999739993436669961
Q ss_pred CCCCHHH-----HHHHHHCCCCHHHHH--HHHHHCCCCCCCH
Q ss_conf 6541389-----999997197865700--2185409330005
Q gi|254780489|r 255 QANSRII-----QKVCEKIGLSKRIMV--NSLKDFGNSSSAS 289 (325)
Q Consensus 255 q~~~~~~-----~~~~~~lgi~~~~~~--~~l~~~GN~~sAs 289 (325)
-.+-..- .++.+.+| ++.+ .+=..+||+-.|+
T Consensus 289 gtgT~~~D~~E~~Ai~~vfg---~~~pvss~Ks~~GH~lgaa 327 (395)
T PRK09185 289 GTATPLNDAMESRAVAAVFG---DTVPCSSTKPLTGHTLGAA 327 (395)
T ss_pred CCCCCCCCHHHHHHHHHHHC---CCCCCCCCCCHHCCCHHHH
T ss_conf 67686658999999999848---8862467641104307889
No 92
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=99.35 E-value=8.2e-11 Score=90.54 Aligned_cols=97 Identities=12% Similarity=0.085 Sum_probs=82.4
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9887999999999998643013222344258843100236887432211210023-863334210123101256765788
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADSY 128 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~~ 128 (325)
.+.++.+|+..+++.+|++++++|++||-||++.+.+.-.-+..+..++-..|++ .++++.|+..|.+++.|+.+|...
T Consensus 23 ~~~~~~~L~a~vi~~~l~r~~i~p~~Id~Vi~G~v~~~~~g~n~AR~aaL~aGlp~~vp~~TVnr~C~SGl~Ai~~aa~~ 102 (392)
T PRK06633 23 STTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTINKVCGSGLKSVALAANS 102 (392)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf 88988999999999999874999899998999915756656669999999769998887268877337999999999999
Q ss_pred HHCCC-CEEEEEEECCCCC
Q ss_conf 74388-5058862012244
Q gi|254780489|r 129 INSHQ-KPVLIIAANLLSR 146 (325)
Q Consensus 129 i~~g~-~~vLVv~~e~~S~ 146 (325)
|++|. .-++..+.|.+|.
T Consensus 103 I~~G~~dvviaGGvEsmS~ 121 (392)
T PRK06633 103 IMTGDNEIVIAGGQENMSL 121 (392)
T ss_pred HHCCCCCEEEEECCCCCCC
T ss_conf 9679986777403354554
No 93
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.35 E-value=7.2e-11 Score=90.89 Aligned_cols=254 Identities=16% Similarity=0.169 Sum_probs=138.9
Q ss_pred CEEEEEEEEECCCCCCCHHHHHHHH--CCC-HHHEEE--CCCCCEEEEECCC---------------CCHHHHHHHHHHH
Q ss_conf 2099999973588613888999880--999-768311--1475088994898---------------8799999999999
Q gi|254780489|r 5 SSCILGFGHAVPNQCIHNSIIERHL--NLK-LGVIEQ--KTGIKYRYWAEKH---------------ETLTDIAIQAGDI 64 (325)
Q Consensus 5 ~~~I~g~g~~lP~~~i~n~~l~~~~--~~~-~~~i~~--~tGI~~R~~~~~~---------------e~~~~la~~Aa~~ 64 (325)
++.|+|+|.--|-- .+.+++-+.+ +.+ ..++.+ ..|.+.+.....+ .....++..|+++
T Consensus 3 rVvITG~G~vsp~G-~~~~e~w~~L~~G~sgi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~~~~~~a~~Aa~e 81 (406)
T PRK07967 3 RVVITGLGIVSSIG-NNQQEVLASLREGRSGITFSQEFAELGMRSQVWGNVKLDPEELIDRKVMRFMGDAAAYAYLAMEQ 81 (406)
T ss_pred EEEEECCEEECCCC-CCHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEECCCCHHHCCCHHHHHCCCHHHHHHHHHHHH
T ss_conf 19998543789882-99999999998199976668854445997616775688936608988870279999999999999
Q ss_pred HHHHCCCCCCCCC----EEEEEEEEEC------------------CCCC--------C-CCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8643013222344----2588431002------------------3688--------7-432211210023863334210
Q gi|254780489|r 65 ALRNANIKKDSIS----LTLLATSTPD------------------HLLP--------P-SSPLITHRLGLMQSGAIDLTG 113 (325)
Q Consensus 65 aL~~a~~~~~dId----~ii~~s~t~d------------------~~~P--------~-~a~~v~~~Lg~~~~~~~di~~ 113 (325)
||++||+++++++ -|+.++..+. ...| + .+..+...+|++. +++-+..
T Consensus 82 Al~dAGl~~~~~~~~r~Gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~a~~is~~~~l~G-p~~tv~~ 160 (406)
T PRK07967 82 AIADAGLSEDQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIKG-VNYSISS 160 (406)
T ss_pred HHHHCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCC
T ss_conf 999759982455856548999278731888999999987418976228348998866689999999848999-7535454
Q ss_pred CCCCCHHHHHHHHHHHHCCC-CEEEEEEECCCCCC----------------------CCCCC-CCCCCCCCCCEEEEEEC
Q ss_conf 12310125676578874388-50588620122444----------------------46222-44343254420011220
Q gi|254780489|r 114 ACAGFLYALVMADSYINSHQ-KPVLIIAANLLSRR----------------------INLED-KDTAIIFGDAAGAVVLA 169 (325)
Q Consensus 114 ~C~g~l~aL~~A~~~i~~g~-~~vLVv~~e~~S~~----------------------~d~~d-~~~~~lfGDgA~A~il~ 169 (325)
+|++++.||..|..+|+.|. +.+++.++|.++.. ..|-| +...+.+|+||+++||+
T Consensus 161 aCas~~~Ai~~A~~~i~~G~~d~~i~GG~d~~~~~~~~~~~~~~~l~~~~~~~P~~~~rPFd~~r~G~v~gEGa~~lvLE 240 (406)
T PRK07967 161 ACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANRDGFVIAGGGGVVVVE 240 (406)
T ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEH
T ss_conf 21278899999999997699787771440235751344677777776224779876756666889984147757998610
Q ss_pred CCCCCCCC--CCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCC
Q ss_conf 57654445--3113553213677652783069866765445565523224514543432010036789889974012001
Q gi|254780489|r 170 PSPLKDKS--GILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQD 247 (325)
Q Consensus 170 ~~~~~~~~--~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~d 247 (325)
+.+..... .|.... ...+...|. .++...++. -..++++++|+..+ .|
T Consensus 241 ~~e~A~~rGa~i~a~i-~g~g~~~d~------------------~~~~~p~~~--------g~~~~~~~al~~~~---~~ 290 (406)
T PRK07967 241 ELEHALARGAKIYAEI-VGYGATSDG------------------YDMVAPSGE--------GAVRCMQMALATVD---TP 290 (406)
T ss_pred HHHHHHHCCCEEEEEE-ECCEECCCC------------------CCCCCCCHH--------HHHHHHHHHHHCCC---CC
T ss_conf 1688986899789999-353431589------------------888798789--------99999999982644---34
Q ss_pred CCEEEECCCCCHH-----HHHHHHHCCCCHHHHHHHHHHCCCCCCCHH
Q ss_conf 2246305654138-----999999719786570021854093300059
Q gi|254780489|r 248 INRFIPHQANSRI-----IQKVCEKIGLSKRIMVNSLKDFGNSSSASI 290 (325)
Q Consensus 248 id~~i~Hq~~~~~-----~~~~~~~lgi~~~~~~~~l~~~GN~~sAsi 290 (325)
|||+..|-.+-.. .+++.+.+|=....+-.+=..+||+-+|+=
T Consensus 291 idyi~aHgtgt~~~D~~E~~Ai~~~fg~~~~~v~s~K~~~GH~~~aaG 338 (406)
T PRK07967 291 IDYINPHGTSTPVGDVKELGAIREVFGDKCPAISATKSLTGHSLGAAG 338 (406)
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHH
T ss_conf 658995457687889999999999867789830166565456517679
No 94
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.34 E-value=1.9e-11 Score=94.70 Aligned_cols=208 Identities=20% Similarity=0.233 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHHHHHCCCC-CC-----CCCEEEEEEEEEC-----------------CC--------CCC-CCCCCCCCC
Q ss_conf 9999999999986430132-22-----3442588431002-----------------36--------887-432211210
Q gi|254780489|r 54 LTDIAIQAGDIALRNANIK-KD-----SISLTLLATSTPD-----------------HL--------LPP-SSPLITHRL 101 (325)
Q Consensus 54 ~~~la~~Aa~~aL~~a~~~-~~-----dId~ii~~s~t~d-----------------~~--------~P~-~a~~v~~~L 101 (325)
.+.|++.|+++||++||+. .+ ++. |++++...+ .. +|+ .++.|...+
T Consensus 4 ~~~~a~~AA~eAl~dAGl~~~~~~~~~r~G-V~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 82 (336)
T PRK09116 4 VSLMATRASELALADAGLLGDPILTDGRMG-VAYGSSTGSTDPIGAFGTMLLTGSMSGITATTYVRMMPHTTAVNVGLFF 82 (336)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCEE-EEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHH
T ss_conf 899999999999996599998667888889-9999574768999999999971898764835776532229999999996
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCE-EEEEEECCCCCCC---------------------CCCC-CCCCCC
Q ss_conf 0238633342101231012567657887438850-5886201224444---------------------6222-443432
Q gi|254780489|r 102 GLMQSGAIDLTGACAGFLYALVMADSYINSHQKP-VLIIAANLLSRRI---------------------NLED-KDTAII 158 (325)
Q Consensus 102 g~~~~~~~di~~~C~g~l~aL~~A~~~i~~g~~~-vLVv~~e~~S~~~---------------------d~~d-~~~~~l 158 (325)
|++. +++-++.+|++++.||..|..+|+.|... +++-++|.++... .|-| ....+.
T Consensus 83 ~l~G-ps~tv~tACsSs~~Al~~A~~~I~~G~~d~~i~Gg~~~l~~~~~~~f~~l~~~s~~~~~p~~~~rPFD~~r~G~v 161 (336)
T PRK09116 83 GLKG-RVIPTSSACTSGSQGIGYAYEAIKYGYQTLMLAGGAEELCPTEAAVFDTLFATSTKNDAPELTPRPFDANRDGLV 161 (336)
T ss_pred CCCC-CCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE
T ss_conf 8999-751635541689999999999997599888993500026880789999999983489999877787778999547
Q ss_pred CCCCEEEEEECCCCCCCC--CCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHH
Q ss_conf 544200112205765444--531135532136776527830698667654455655232245145434320100367898
Q gi|254780489|r 159 FGDAAGAVVLAPSPLKDK--SGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQ 236 (325)
Q Consensus 159 fGDgA~A~il~~~~~~~~--~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~ 236 (325)
.|+|++++||++.+.... ..|.... ...+...|. .++...++ ....+++++
T Consensus 162 ~gEGa~~lvLe~~~~A~~rga~i~a~i-~G~~~~~dg------------------~~~t~P~~--------~~~~~~~~~ 214 (336)
T PRK09116 162 IGEGAGTLVLEELEHAKARGATIYAEI-VGFGTNSDG------------------AHVTQPQA--------ETMQIAMEL 214 (336)
T ss_pred ECCEEEEEEEEEHHHHHHCCCEEEEEE-ECEEECCCC------------------CCCCCCCH--------HHHHHHHHH
T ss_conf 704347999728899986799579998-120660488------------------88989799--------999999999
Q ss_pred HHHHHCCCCCCCCEEEECCCCCHH-----HHHHHHHCCCCHHHHHH-HHHHCCCCCCCHHHH
Q ss_conf 899740120012246305654138-----99999971978657002-185409330005999
Q gi|254780489|r 237 SLRKSDLQPQDINRFIPHQANSRI-----IQKVCEKIGLSKRIMVN-SLKDFGNSSSASIPL 292 (325)
Q Consensus 237 ~l~~~gl~~~did~~i~Hq~~~~~-----~~~~~~~lgi~~~~~~~-~l~~~GN~~sAsi~~ 292 (325)
+|+++|++++||||+-.|-.+-.. .+++.+.++- +.-+. +=..+||+..|+=.+
T Consensus 215 al~~ag~~~~~i~yI~aHgtgT~~gD~~E~~ai~~~fg~--~~pi~S~Ks~~GH~~gAaG~~ 274 (336)
T PRK09116 215 ALKDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFGA--RMPISSLKSYFGHTLGACGAL 274 (336)
T ss_pred HHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCC--CCCCCCCCCCCCCCHHHHHHH
T ss_conf 999709880212289953777888899999999998576--788877642104417779999
No 95
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.34 E-value=2e-11 Score=94.59 Aligned_cols=98 Identities=12% Similarity=0.047 Sum_probs=80.5
Q ss_pred CCCCHHHHHHHHHHHHHHH-CCCCCCCCCEEEEEEEEECC-CCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 9887999999999998643-01322234425884310023-6887432211210023-8633342101231012567657
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRN-ANIKKDSISLTLLATSTPDH-LLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMAD 126 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~-a~~~~~dId~ii~~s~t~d~-~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~ 126 (325)
.+.++.+|+..+++.+|+| ++++|++||-||++++.+.. .-...+..+.-.-|++ .++++.|+..|.+++.|+.+|.
T Consensus 23 ~~~~~~~L~a~~i~~~l~r~~~l~~~~Id~vi~G~v~~~~~~g~n~aR~aaL~aGlp~~vpa~tVnr~C~SGl~Ai~~Aa 102 (387)
T PRK08947 23 RNVRAEDLSAHLMRALLARNPALDPAEIEDIIWGCVQQTLEQGFNIARNAALLAGIPHTVPAVTVNRLCGSSMQALHDAA 102 (387)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHH
T ss_conf 88999999999999999745896989989899970665544333599999997699988861664014237999999999
Q ss_pred HHHHCC-CCEEEEEEECCCCCC
Q ss_conf 887438-850588620122444
Q gi|254780489|r 127 SYINSH-QKPVLIIAANLLSRR 147 (325)
Q Consensus 127 ~~i~~g-~~~vLVv~~e~~S~~ 147 (325)
+.|++| .+-+++.+.|.+|+.
T Consensus 103 ~~I~~G~~dvvlaGGvEsMS~~ 124 (387)
T PRK08947 103 RAIMTGDGDVFLIGGVEHMGHV 124 (387)
T ss_pred HHHCCCCCCEEEEEEECCCCCC
T ss_conf 8652799778998410225778
No 96
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=99.33 E-value=2.3e-11 Score=94.17 Aligned_cols=98 Identities=23% Similarity=0.224 Sum_probs=83.1
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9887999999999998643013222344258843100236887432211210023-863334210123101256765788
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADSY 128 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~~ 128 (325)
.+.++.+|+..+.+.+|++++++|++||-||++.+.+....+..|..++-..|++ .++++.|+..|.+++.|+.+|...
T Consensus 23 ~~~~~~~L~a~~i~~~l~r~~i~p~~Id~Vi~G~v~~~~~~~n~AR~aaL~aGlp~~vp~~TVnr~C~SGl~Ai~~Aa~~ 102 (426)
T PRK08170 23 GPFSASDLAVQAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIGRVAALRLGCGEDVPGWTVQRNCASGMQALDSAARN 102 (426)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf 88898999999999999974999899998999933625666779999999769998887267766123799999999999
Q ss_pred HHCCC-CEEEEEEECCCCCC
Q ss_conf 74388-50588620122444
Q gi|254780489|r 129 INSHQ-KPVLIIAANLLSRR 147 (325)
Q Consensus 129 i~~g~-~~vLVv~~e~~S~~ 147 (325)
|++|. .-++..+.|.+|+.
T Consensus 103 I~~G~~dvviAGGvEsMS~~ 122 (426)
T PRK08170 103 IALGRADLVLAGGTEALSRA 122 (426)
T ss_pred HHCCCCCEEEEECCCCCCCC
T ss_conf 85599888999372204567
No 97
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=99.32 E-value=3.8e-11 Score=92.69 Aligned_cols=98 Identities=14% Similarity=0.046 Sum_probs=80.0
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9887999999999998643013222344258843100236887432211210023-863334210123101256765788
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADSY 128 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~~ 128 (325)
.+.++.+|+..+++.+|++++++|++||-||++.+.+.-..+..|..+.-.-|++ .++++.|+..|.+++.|+.+|.+.
T Consensus 27 ~~~~~~~L~~~~i~~~l~r~gi~~~~iD~vi~G~v~~~g~~~n~aR~~aL~aGlp~~vp~~TVnr~C~SGl~Ai~~Aa~~ 106 (428)
T PRK09268 27 ADASNQDMLTAALDGLVERFGLHGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPETPAYDLQQACGTGLEAAILVANK 106 (428)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHH
T ss_conf 88988999999999999982999899998999935765656539999999669898887268852757999999999999
Q ss_pred HHCCC-CEEEEEEECCCCCC
Q ss_conf 74388-50588620122444
Q gi|254780489|r 129 INSHQ-KPVLIIAANLLSRR 147 (325)
Q Consensus 129 i~~g~-~~vLVv~~e~~S~~ 147 (325)
|++|. .-++..+.|.+|+.
T Consensus 107 I~~G~~dvviAGGvEsmS~~ 126 (428)
T PRK09268 107 IALGQIDSGIAGGVDTTSDA 126 (428)
T ss_pred HHCCCCCEEEEECCCCCCCC
T ss_conf 98799988999461235678
No 98
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.30 E-value=4.3e-11 Score=92.39 Aligned_cols=222 Identities=18% Similarity=0.206 Sum_probs=130.3
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCE----EEEEEEEECC--------------CCC-----CCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999986430132223442----5884310023--------------688-----743221121002386333421
Q gi|254780489|r 56 DIAIQAGDIALRNANIKKDSISL----TLLATSTPDH--------------LLP-----PSSPLITHRLGLMQSGAIDLT 112 (325)
Q Consensus 56 ~la~~Aa~~aL~~a~~~~~dId~----ii~~s~t~d~--------------~~P-----~~a~~v~~~Lg~~~~~~~di~ 112 (325)
-|+.+++++||++||+++++++- |+.++++.++ ..| ..+.+|...+|++. +++-++
T Consensus 89 rl~L~~a~eAl~dAG~~~~~~~~~r~GV~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~~~G-p~~~v~ 167 (421)
T cd00833 89 RLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLRG-PSLTVD 167 (421)
T ss_pred HHHHHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC-CCCCCC
T ss_conf 9999999999975289834648863499966666647889742756578530135431179999999968999-600335
Q ss_pred CCCCCCHHHHHHHHHHHHCCC-CEEEEEEECC-CCC----------CC------CCCC-CCCCCCCCCCEEEEEECCCCC
Q ss_conf 012310125676578874388-5058862012-244----------44------6222-443432544200112205765
Q gi|254780489|r 113 GACAGFLYALVMADSYINSHQ-KPVLIIAANL-LSR----------RI------NLED-KDTAIIFGDAAGAVVLAPSPL 173 (325)
Q Consensus 113 ~~C~g~l~aL~~A~~~i~~g~-~~vLVv~~e~-~S~----------~~------d~~d-~~~~~lfGDgA~A~il~~~~~ 173 (325)
.+|++++.||..|.++|+.|. +.+++.+++. .+. .+ .+-| ....++.|+||+++||++.+.
T Consensus 168 tACaSsl~Ai~~A~~~i~~G~~d~ai~Gg~~~~~~~~~~~~~~~~~~ls~~~~~rpFD~~~~G~v~gEGa~~lvLe~~~~ 247 (421)
T cd00833 168 TACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADADGYVRGEGVGVVVLKRLSD 247 (421)
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCEEEECEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHH
T ss_conf 36279999999999998579943544120003158689999863578689998567888999865557513543687899
Q ss_pred CC--CCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEE
Q ss_conf 44--4531135532136776527830698667654455655232245145434320100367898899740120012246
Q gi|254780489|r 174 KD--KSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQDINRF 251 (325)
Q Consensus 174 ~~--~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~ 251 (325)
.. +..|.... ...+...|. +.......++ +...++++++|++++++++||||+
T Consensus 248 A~~~g~~I~a~i-~G~g~~~dg----------------~~~~~~~P~~--------~~~~~~~~~al~~agi~~~~i~yi 302 (421)
T cd00833 248 ALRDGDRIYAVI-RGSAVNQDG----------------RTKGITAPSG--------EAQAALIRRAYARAGVDPSDIDYV 302 (421)
T ss_pred HHHCCCCEEEEE-EEEEECCCC----------------CCCCCCCCCH--------HHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 987699479999-899980689----------------7778888756--------689999999999729994412089
Q ss_pred EECCCCCHH-----HHHHHHHCCCCH---HHHH--HHHHHCCCCCCCHHHHHHHH---HHHHCCC
Q ss_conf 305654138-----999999719786---5700--21854093300059999999---9980678
Q gi|254780489|r 252 IPHQANSRI-----IQKVCEKIGLSK---RIMV--NSLKDFGNSSSASIPLSLSL---ENQRKPF 303 (325)
Q Consensus 252 i~Hq~~~~~-----~~~~~~~lgi~~---~~~~--~~l~~~GN~~sAsi~~~L~~---~~~~g~i 303 (325)
-.|-.+... .+++.+.++=.. .+.+ .+=..+||+-+|+-.+.+-. +++.+.+
T Consensus 303 eaHgtgT~~gD~~E~~ai~~~f~~~~~~~~~~~v~S~Ks~~GH~~~AaG~~~~i~~~lal~~~~i 367 (421)
T cd00833 303 EAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGVI 367 (421)
T ss_pred EEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 97447686669999999999961257777863023543453433576799999999999855982
No 99
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.27 E-value=4.1e-10 Score=85.97 Aligned_cols=245 Identities=18% Similarity=0.211 Sum_probs=148.8
Q ss_pred CHHHHHHHHHHHHHHHCC-CCCCCCCEEEEEEEE--ECCCCC---CCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHH
Q ss_conf 799999999999864301-322234425884310--023688---7432211210023-863334210123101256765
Q gi|254780489|r 53 TLTDIAIQAGDIALRNAN-IKKDSISLTLLATST--PDHLLP---PSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMA 125 (325)
Q Consensus 53 ~~~~la~~Aa~~aL~~a~-~~~~dId~ii~~s~t--~d~~~P---~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A 125 (325)
....|+..|.+++|++.. ..+.++.+++....- |....+ .....+...+|.. +..+.-+..||.+++.+|..|
T Consensus 63 Rl~~la~~Al~eal~~~~~~~~~~~~l~l~l~e~~r~g~~~~~~~~~l~~l~~~~g~~~~~~s~~~~~G~as~~~al~~A 142 (346)
T PRK06147 63 RLAAMAAPALAEALEGLPALDASEAPLLLCVAEEERPGRPAGLEERLLRSLEEELGLRFEPGSAVIARGRVSGAVALLQA 142 (346)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHH
T ss_conf 99999999999998507865632364699836655777875105789999998727566766056525630499999999
Q ss_pred HHHHHCC-CCEEEEEEECCCCC------------CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC--CEEEEEEECCCC
Q ss_conf 7887438-85058862012244------------44622244343254420011220576544453--113553213677
Q gi|254780489|r 126 DSYINSH-QKPVLIIAANLLSR------------RINLEDKDTAIIFGDAAGAVVLAPSPLKDKSG--ILGIELTSDGSK 190 (325)
Q Consensus 126 ~~~i~~g-~~~vLVv~~e~~S~------------~~d~~d~~~~~lfGDgA~A~il~~~~~~~~~~--il~~~~~s~~~~ 190 (325)
..+|+.| ...+||.+.|.+-. ..... ....|+-|.||++++|++.......+ ++..-+.+.+..
T Consensus 143 ~~~l~~g~~~~~lv~GvDS~~~~~~l~~~~~~~rL~~~~-~~~GfvpGEgAa~llL~~~~~a~~rga~i~g~g~g~e~a~ 221 (346)
T PRK06147 143 RRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARERLLSSQ-NSNGFIPGEAAAAVLLGRPAAARAPQLPCLGLGLGREPAT 221 (346)
T ss_pred HHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCC-CCCCCCCCCHHEEEEECCCCHHHCCCCCEEEEEEECCCCC
T ss_conf 999865999879999872347878999998605426899-9889585202047885261100147982345662036653
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHH-----HHH
Q ss_conf 652783069866765445565523224514543432010036789889974012001224630565413899-----999
Q gi|254780489|r 191 YDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFIPHQANSRIIQ-----KVC 265 (325)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~-----~~~ 265 (325)
+ ...+. -.+| +-+.+.++.+|+.+++.+++|||++-|.-+..... .+.
T Consensus 222 ~----------------~~~~~---p~~g--------~Gl~~A~~~Al~~ag~~~~~v~~~~ad~nGe~~r~~e~~~a~~ 274 (346)
T PRK06147 222 V----------------ESEDL---PLRG--------DGLTQAFRAALAEAGIGLEDVGYRLADLNGEQYRFKEAALAES 274 (346)
T ss_pred C----------------CCCCC---CCCC--------HHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHH
T ss_conf 3----------------47789---9865--------7999999999986279856777799689988442137999999
Q ss_pred HHCCCCHH--HHHHHHHHCCCCCCCHHHHHHHHHHHH--CCCCCCCEEEEEEECCCCCCCCCCC
Q ss_conf 97197865--700218540933000599999999980--6789998999998615510201019
Q gi|254780489|r 266 EKIGLSKR--IMVNSLKDFGNSSSASIPLSLSLENQR--KPFQKGEKILTISCRRGNDRGIYCL 325 (325)
Q Consensus 266 ~~lgi~~~--~~~~~l~~~GN~~sAsi~~~L~~~~~~--g~i~~Gd~vll~~~G~G~s~ga~lL 325 (325)
+.++.+.+ .++..-..+||+++|+-++.+.-+... +..-||.++|+++-.=+-..++++|
T Consensus 275 R~~~~~~~~~~~~~pa~~~G~~GAA~G~~~~a~a~~a~~~g~~pg~~~l~~~s~d~g~r~A~~l 338 (346)
T PRK06147 275 RLFRVPHEFPDLWHPAECLGECGAALGPALLGVALAASRKGYGPGPPVLCHASDDDGARGAAVL 338 (346)
T ss_pred HHHCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEE
T ss_conf 7520256666656877751647889999999999999982868998679995478875269998
No 100
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=99.27 E-value=1.7e-10 Score=88.47 Aligned_cols=97 Identities=20% Similarity=0.153 Sum_probs=78.0
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECC-CCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 988799999999999864301322234425884310023-6887432211210023-86333421012310125676578
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDH-LLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADS 127 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~-~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~ 127 (325)
.+.++.+|+..+++++|++++++ .+||-||++.+.+.- .-...+..+.-.-|++ .++++.|+..|.+++.|+..|.+
T Consensus 17 ~~~~~~~L~a~~i~~~l~r~~i~-~~id~vi~G~~~~~~~~g~n~aR~aal~aGlp~~vp~~TVnr~C~SGl~Ai~~aa~ 95 (384)
T PRK07661 17 KTVRPDDLGALVVKETLKRANYE-GPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVPAITINRYCSSGLQSIAYGAE 95 (384)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCC-CCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHH
T ss_conf 99999999999999999860989-63596999947664655666999999976999887726773502168999999999
Q ss_pred HHHCCC-CEEEEEEECCCCCC
Q ss_conf 874388-50588620122444
Q gi|254780489|r 128 YINSHQ-KPVLIIAANLLSRR 147 (325)
Q Consensus 128 ~i~~g~-~~vLVv~~e~~S~~ 147 (325)
.|++|. +-++..+.|.+|+.
T Consensus 96 ~I~~G~~dvviAGGvEsMS~~ 116 (384)
T PRK07661 96 RIMLGHSEAVLAGGAESMSLV 116 (384)
T ss_pred HHHCCCCCEEEECCEECCCCC
T ss_conf 997699767875462122578
No 101
>PRK07937 lipid-transfer protein; Provisional
Probab=99.25 E-value=3.7e-10 Score=86.27 Aligned_cols=225 Identities=15% Similarity=0.036 Sum_probs=129.3
Q ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 7999999999998643013222344258843100236887432--21121002386333421012310125676578874
Q gi|254780489|r 53 TLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSP--LITHRLGLMQSGAIDLTGACAGFLYALVMADSYIN 130 (325)
Q Consensus 53 ~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~--~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~ 130 (325)
+..+|+.+|+++||++||++++|||.+++++. |++....-. .....||. .+.+.+++.|.++..|+..|...|+
T Consensus 23 ~~~eL~~eA~~~Al~DAGl~~~DId~~~~g~~--d~~~G~~~~~~~~~~~lg~--~p~~~~~~~~~sg~~Al~~A~~aI~ 98 (352)
T PRK07937 23 NGVEMLMPCFAQLYEELGITKADIGFWCSGSS--DYLAGRAFSFISAIDSIGA--VPPINESHVEMDAAWALYEAYIKIL 98 (352)
T ss_pred CHHHHHHHHHHHHHHHCCCCHHHCCEEEEECC--CCCCCCCHHHHHHHHHCCC--CCCEEEECEECCHHHHHHHHHHHHH
T ss_conf 99999999999999984999899978967146--5345410135777764368--7745330102229999999999986
Q ss_pred CC-CCEEEEEEECCCCCC---------CCCC-------------------------------------------------
Q ss_conf 38-850588620122444---------4622-------------------------------------------------
Q gi|254780489|r 131 SH-QKPVLIIAANLLSRR---------INLE------------------------------------------------- 151 (325)
Q Consensus 131 ~g-~~~vLVv~~e~~S~~---------~d~~------------------------------------------------- 151 (325)
+| .+.+||++.|.+|.. .|+.
T Consensus 99 sG~~d~vLvvG~ek~s~g~~~~~~~~~~dp~~~~~~~~~~~~~~al~ar~~m~~~g~t~E~lA~Vavkn~~nA~~NP~A~ 178 (352)
T PRK07937 99 TGEVDTALVYGFGKSSAGTLRRVLARQLDPYTVAPLWPDSVSMAGLQARLGLDAGKWTEEQMAEVAADSFADARRNDSAQ 178 (352)
T ss_pred CCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 78999899987336687753333334578113133446278999999999998549999999999999988772198766
Q ss_pred ---------------CCCC---CCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCC-CCCCCCCCC
Q ss_conf ---------------2443---432544200112205765444531135532136776527830698667-654455655
Q gi|254780489|r 152 ---------------DKDT---AIIFGDAAGAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTS-PAGTNTHDF 212 (325)
Q Consensus 152 ---------------d~~~---~~lfGDgA~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~-~~~~~~~~~ 212 (325)
++.+ .-..+|||+|+||..++...+..--. .++.+.+... ......++.
T Consensus 179 ~~~tvedvl~s~~ia~PL~~~dc~p~sDGAaAvVl~s~e~Ar~l~~~p------------v~I~g~~~~~~~~~~~~~dl 246 (352)
T PRK07937 179 PSISVDELLARPYFADPLRRHDIAPITDGAAAIVLAAGDRARELRERP------------AWITGIEHRIETPALGARDL 246 (352)
T ss_pred CCCCHHHHHCCCEECCCCCHHHHCCCCCEEEEEEEECHHHHHHCCCCC------------EEEEEEEEECCCCCCCCCCC
T ss_conf 789999982688355788566508878726999995599997566897------------89999898436887776655
Q ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHH----HHHCCCCCCC
Q ss_conf 232245145434320100367898899740120012246305654138999999719786570021----8540933000
Q gi|254780489|r 213 YMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNS----LKDFGNSSSA 288 (325)
Q Consensus 213 ~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~----l~~~GN~~sA 288 (325)
...+.......+.+|++++|||.+=.|-.-...--...+.||+. .+++.| +-- ||-..|
T Consensus 247 ---------------~~~~~~~~aa~~aagi~p~DiDvaElhD~Fs~~el~~~E~LGl~-g~~pVN~sGG~ls-ghp~gA 309 (352)
T PRK07937 247 ---------------TVSPSTAAAAEAATGGDTGDIDVAELHAPFTHQELILAEAIGLP-DKTKVNPSGGALA-ANPMFA 309 (352)
T ss_pred ---------------CCCHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHCCCC-CCCCCCCCCCCCC-CCCCCH
T ss_conf ---------------23799999999974999534757887257507789998842889-9954668986210-698642
Q ss_pred HHHHHHHHHHHHCCCCCCCEEE
Q ss_conf 5999999999806789998999
Q gi|254780489|r 289 SIPLSLSLENQRKPFQKGEKIL 310 (325)
Q Consensus 289 si~~~L~~~~~~g~i~~Gd~vl 310 (325)
+=...+.++.++-+=+.|++-+
T Consensus 310 tGl~~~~E~~~ql~~~~~~rqv 331 (352)
T PRK07937 310 AGLERIGFAARHIWDGSARRAL 331 (352)
T ss_pred HHHHHHHHHHHHHHCCCCCCCC
T ss_conf 8999999999998555556325
No 102
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.25 E-value=6.5e-10 Score=84.64 Aligned_cols=268 Identities=15% Similarity=0.158 Sum_probs=144.5
Q ss_pred CEEEEEEEEECCCCCCCHHHHHHHH--CCC-HHHEEE--CCCCCEEEE-----------ECCC-----CCHHHHHHHHHH
Q ss_conf 2099999973588613888999880--999-768311--147508899-----------4898-----879999999999
Q gi|254780489|r 5 SSCILGFGHAVPNQCIHNSIIERHL--NLK-LGVIEQ--KTGIKYRYW-----------AEKH-----ETLTDIAIQAGD 63 (325)
Q Consensus 5 ~~~I~g~g~~lP~~~i~n~~l~~~~--~~~-~~~i~~--~tGI~~R~~-----------~~~~-----e~~~~la~~Aa~ 63 (325)
.+.|+|+|.-.|--. +-+++-+.+ |.+ ...+.. ..+...+.- ..+. .....++..|++
T Consensus 3 RVvITGiG~vsp~G~-~~e~~w~~L~~G~sgi~~~~~~d~~~~~~~~ag~v~~fd~~~~~~~~~~~~~dr~~~lal~aa~ 81 (405)
T PRK08439 3 RVVVTGMGMINSLGL-DKESSFKAICNGECGIKKITLFDASDFPVKIAGEITDFDPTEVMDPKEVKKADRFIQLGLKAAR 81 (405)
T ss_pred CEEEECCEEECCCCC-CHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEECCCCHHHCCCHHHHHHHCHHHHHHHHHHH
T ss_conf 199973134798718-9999999998399977748876766897418998388795673899999862899999999999
Q ss_pred HHHHHCCCCC----CCCCEEEEEEEEE-----------------CCCCC----C-----CCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9864301322----2344258843100-----------------23688----7-----432211210023863334210
Q gi|254780489|r 64 IALRNANIKK----DSISLTLLATSTP-----------------DHLLP----P-----SSPLITHRLGLMQSGAIDLTG 113 (325)
Q Consensus 64 ~aL~~a~~~~----~dId~ii~~s~t~-----------------d~~~P----~-----~a~~v~~~Lg~~~~~~~di~~ 113 (325)
+||++||+.. +.+.. +.++... ....| . .+.+|...+|++. +++-++.
T Consensus 82 eAl~dAGl~~~~~~~r~Gv-~~gt~~g~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~a~~is~~~~~~G-p~~tv~t 159 (405)
T PRK08439 82 EAMKDAGFLEEHDKDRFGV-SSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLKG-PNLSSVT 159 (405)
T ss_pred HHHHHCCCCCCCCCCCEEE-EEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC-CCCCCHH
T ss_conf 9998448775577566799-9986677557799999999846976448027678888899999999839989-7656263
Q ss_pred CCCCCHHHHHHHHHHHHCCC-CEEEEEEECC-CCCC---------------------CCCCC-CCCCCCCCCCEEEEEEC
Q ss_conf 12310125676578874388-5058862012-2444---------------------46222-44343254420011220
Q gi|254780489|r 114 ACAGFLYALVMADSYINSHQ-KPVLIIAANL-LSRR---------------------INLED-KDTAIIFGDAAGAVVLA 169 (325)
Q Consensus 114 ~C~g~l~aL~~A~~~i~~g~-~~vLVv~~e~-~S~~---------------------~d~~d-~~~~~lfGDgA~A~il~ 169 (325)
+|++++.||..|.++|+.|. +.++|.++|. .+.. ..|-| ....+..|+||+++||+
T Consensus 160 ACass~~Ai~~A~~~I~~G~~d~~ivgG~~~~l~~~~~~~f~~~~~ls~~~~~P~~~~rPFD~~r~G~v~gEGa~~lvLe 239 (405)
T PRK08439 160 ACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFASMKALSTRNDDPKKASRPFDKDRDGFVMGEGAGALVLE 239 (405)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEEC
T ss_conf 75899999999999997089776774150220273568999875323025889654667876899847742467889724
Q ss_pred CCCCCCC--CCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCC
Q ss_conf 5765444--53113553213677652783069866765445565523224514543432010036789889974012001
Q gi|254780489|r 170 PSPLKDK--SGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQD 247 (325)
Q Consensus 170 ~~~~~~~--~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~d 247 (325)
+.+.... ..|.... ...+...|. .++...+. .-..++++++|+++|++ +
T Consensus 240 ~~~~A~~rga~i~a~i-~G~~~~~d~------------------~~~t~P~~--------~g~~~a~~~Al~~ag~~--~ 290 (405)
T PRK08439 240 EYESAKKRGAKIYAEL-IGFGESGDA------------------NHITSPAP--------DGPLRAMKKALEMAGNP--K 290 (405)
T ss_pred CHHHHHHCCCEEEEEE-EEECCCCCC------------------CCCCCCCH--------HHHHHHHHHHHHHCCCC--C
T ss_conf 4887865799689999-987676688------------------89989898--------99999999999975999--6
Q ss_pred CCEEEECCCCCHH-----HHHHHHHCCCCHHHH-H-HHHHHCCCCCCCHHHHHHH---HHHHHCCCC
Q ss_conf 2246305654138-----999999719786570-0-2185409330005999999---999806789
Q gi|254780489|r 248 INRFIPHQANSRI-----IQKVCEKIGLSKRIM-V-NSLKDFGNSSSASIPLSLS---LENQRKPFQ 304 (325)
Q Consensus 248 id~~i~Hq~~~~~-----~~~~~~~lgi~~~~~-~-~~l~~~GN~~sAsi~~~L~---~~~~~g~i~ 304 (325)
|||+-.|-.+-.. .+++.+.+|-..... + .+=..+||+-.|+=.+.+. .+++.+.+.
T Consensus 291 idyi~aHgTgT~~gD~~E~~Ai~~vfg~~~~~~~v~S~Ks~iGH~~gAaG~~e~i~~~lal~~g~ip 357 (405)
T PRK08439 291 VDYVNAHGTSTPYNDKNETAALKELFGSKENVPPVSSTKGQIGHCLGAAGAIEAVISIMAMRDGILP 357 (405)
T ss_pred EEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 1179720576878789999999998566677888657310003236667899999999999649558
No 103
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=99.25 E-value=7.7e-11 Score=90.73 Aligned_cols=98 Identities=11% Similarity=0.059 Sum_probs=80.1
Q ss_pred CCCCHHHHHHHHHHHHHHH-CCCCCCCCCEEEEEEEEECC-CCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 9887999999999998643-01322234425884310023-6887432211210023-8633342101231012567657
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRN-ANIKKDSISLTLLATSTPDH-LLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMAD 126 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~-a~~~~~dId~ii~~s~t~d~-~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~ 126 (325)
.+.++.+|+..+++.+|+| ++++|++||-||++.+.+.. ..+..+..++-.-|++ .++++.|+..|.+++.|+..|.
T Consensus 22 ~~~~~~~L~a~~i~~~l~r~~~i~~~~Id~Vi~G~~~~~g~~g~n~aR~~aL~aGlp~~vpa~TVnr~C~SGl~Ai~~aa 101 (400)
T PRK13359 22 SSVRADDLGAVPLKALVERNRDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVPGTTINRLCGSGMDAVGVAA 101 (400)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHH
T ss_conf 99988999999999999726997989999799982775565457689999997699988762676132114999999999
Q ss_pred HHHHCCC-CEEEEEEECCCCCC
Q ss_conf 8874388-50588620122444
Q gi|254780489|r 127 SYINSHQ-KPVLIIAANLLSRR 147 (325)
Q Consensus 127 ~~i~~g~-~~vLVv~~e~~S~~ 147 (325)
..|++|. +-++..+.|.+|+.
T Consensus 102 ~~I~~G~~dvviAGGvEsmS~~ 123 (400)
T PRK13359 102 RAIKSGEAALMIAGGVESMSRA 123 (400)
T ss_pred HHHHCCCCCEEEECCEECCCCC
T ss_conf 9985799887885155115556
No 104
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=99.23 E-value=4e-10 Score=86.04 Aligned_cols=98 Identities=9% Similarity=0.075 Sum_probs=80.9
Q ss_pred CCCCHHHHHHHHHHHHHHH-CCCCCCCCCEEEEEEEEECCC-CCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 9887999999999998643-013222344258843100236-887432211210023-8633342101231012567657
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRN-ANIKKDSISLTLLATSTPDHL-LPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMAD 126 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~-a~~~~~dId~ii~~s~t~d~~-~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~ 126 (325)
.+.++.+|+..+++.+|+| ++++|++||-||.+.+.+.-. .+..+..+.-..|++ .++++.|+..|.++++|+..|.
T Consensus 22 ~~~~~~~L~a~~i~~~l~r~~~l~~~~Id~vi~G~~~~~g~~g~n~aR~aal~aGlp~~vpa~TVnr~C~SGl~Ai~~Aa 101 (401)
T PRK09050 22 SSVRADDLGAVPLKALMERNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVPGTTINRLCGSGMDAVGTAA 101 (401)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHH
T ss_conf 99988999999999999735896989989599963776574557699999997799988855786013078999999999
Q ss_pred HHHHCCC-CEEEEEEECCCCCC
Q ss_conf 8874388-50588620122444
Q gi|254780489|r 127 SYINSHQ-KPVLIIAANLLSRR 147 (325)
Q Consensus 127 ~~i~~g~-~~vLVv~~e~~S~~ 147 (325)
+.|++|. .-+++.+.|.+|+.
T Consensus 102 ~~I~~G~~dv~iaGGvEsmS~~ 123 (401)
T PRK09050 102 RAIKAGEAELMIAGGVESMSRA 123 (401)
T ss_pred HHHHCCCCCEEEEECCCCCCCC
T ss_conf 9984799777986142355656
No 105
>pfam07451 SpoVAD Stage V sporulation protein AD (SpoVAD). This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation.
Probab=99.19 E-value=9.2e-10 Score=83.67 Aligned_cols=272 Identities=18% Similarity=0.275 Sum_probs=160.0
Q ss_pred CCCEEEEEEEEECCCCCCCHHHHHHHHCCC--HHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf 662099999973588613888999880999--768311147508899489887999999999998643013222344258
Q gi|254780489|r 3 KSSSCILGFGHAVPNQCIHNSIIERHLNLK--LGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTL 80 (325)
Q Consensus 3 ~~~~~I~g~g~~lP~~~i~n~~l~~~~~~~--~~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii 80 (325)
.+..+|.+.++..-+.- .+--+.+.|+.- +.+.-+++ ++.--..|-.+|++.||++++++++|||+++
T Consensus 8 ~~~p~I~s~asvvGpkE-g~GPL~~~FD~i~~D~~~G~~s---------wEkAE~~m~~~A~~~al~Ka~l~~~dId~~~ 77 (329)
T pfam07451 8 ENPPVIISTASVVGPKE-GEGPLGDYFDIIYEDDLFGEDS---------WEKAESKMLEEAVKLALKKAGLKKDDIDYLL 77 (329)
T ss_pred CCCCEEEEEEEEECCCC-CCCCCHHHCCEEECCCCCCCCC---------HHHHHHHHHHHHHHHHHHHCCCCHHHCEEEE
T ss_conf 69988999767867735-6788755377240264457343---------9999999999999999987499988864895
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCEEEEEEECCCC---CCCC----CC-
Q ss_conf 8431002368874322112100238633342101231012567657887438-8505886201224---4446----22-
Q gi|254780489|r 81 LATSTPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYINSH-QKPVLIIAANLLS---RRIN----LE- 151 (325)
Q Consensus 81 ~~s~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~g-~~~vLVv~~e~~S---~~~d----~~- 151 (325)
.+--. .+..+ +++.++.|++| -|.+=.+|+.+..+|.+|.-++.+| ++++|..++-.++ |.+. |.
T Consensus 78 aGDLl-nQ~i~--ssf~ar~l~iP---f~GlyGACST~~E~l~laa~~vd~g~A~~vla~tSSH~~tAErQFR~P~EyG~ 151 (329)
T pfam07451 78 AGDLL-NQIIS--SSFAARTLGIP---FLGLYGACSTMMESLALAAMLVDGGFADYVLAATSSHFASAERQFRFPTEYGG 151 (329)
T ss_pred ECHHH-HHHHH--HHHHHHHCCCC---EEEHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCHHHHHHCCCCHHCCC
T ss_conf 01244-32577--77889863998---12113566778999999999984665434134314452036654268221167
Q ss_pred CC-CCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCH
Q ss_conf 24-43432544200112205765444531135532136776527830698667654455655232245145434320100
Q gi|254780489|r 152 DK-DTAIIFGDAAGAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIM 230 (325)
Q Consensus 152 d~-~~~~lfGDgA~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~ 230 (325)
+| .++--==-||+|+||++.. +.+.|....+. ++.+.|-..|... |.. ..+..
T Consensus 152 QrpptAqWTVTGaGa~il~~~~--~~p~It~~TiG---------kVvD~Gi~Dp~nM-----------GaA----MAPAA 205 (329)
T pfam07451 152 QRPPTAQWTVTGAGAVLLGKEG--DGPRITSATIG---------KVVDYGIKDPNNM-----------GAA----MAPAA 205 (329)
T ss_pred CCCCCCCEEEECEEEEEEECCC--CCCEEEEEEEE---------EEEECCCCCCCCC-----------HHH----HHHHH
T ss_conf 7998663788751899994389--98779898778---------8876588884302-----------555----64789
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEECC---CCCHHHHHHHHHCCCCHHHHH-H----HHH----HC--CCC---CCCHHHHH
Q ss_conf 3678988997401200122463056---541389999997197865700-2----185----40--933---00059999
Q gi|254780489|r 231 AQSAKQSLRKSDLQPQDINRFIPHQ---ANSRIIQKVCEKIGLSKRIMV-N----SLK----DF--GNS---SSASIPLS 293 (325)
Q Consensus 231 ~~~i~~~l~~~gl~~~did~~i~Hq---~~~~~~~~~~~~lgi~~~~~~-~----~l~----~~--GN~---~sAsi~~~ 293 (325)
...|.+.+++.|.+++|.|.++.-- .+.+++..+.++-|++.++.+ + +++ +. |-. .||.+...
T Consensus 206 ~dTI~~hf~D~g~~p~dYDlIvTGDLG~vG~~i~~~Ll~~~g~~i~~~~~DCG~~Iyd~~~Q~v~aGGSGcgCSAvV~~g 285 (329)
T pfam07451 206 ADTIEQHFQDTGRDPSDYDLIVTGDLGKVGREIAEDLLKEKGYDISENYQDCGLLIYDNEKQDVHAGGSGCGCSAVVLYG 285 (329)
T ss_pred HHHHHHHHHHCCCCHHHCCEEEECCHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 99999999970999224447996644887899999999981988444317667686647877655787643368999999
Q ss_pred -HHHHHHHCCCCCCCEEEEEEECCCCC
Q ss_conf -99999806789998999998615510
Q gi|254780489|r 294 -LSLENQRKPFQKGEKILTISCRRGND 319 (325)
Q Consensus 294 -L~~~~~~g~i~~Gd~vll~~~G~G~s 319 (325)
+-.-+++|++| |||+++.|+=+|
T Consensus 286 ~il~~m~~g~~k---rvL~VaTGALlS 309 (329)
T pfam07451 286 YLLKKMKKGELK---RVLFVATGALLS 309 (329)
T ss_pred HHHHHHHCCCCE---EEEEEECCHHCC
T ss_conf 989999658721---899997503138
No 106
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=99.17 E-value=4.3e-10 Score=85.85 Aligned_cols=93 Identities=15% Similarity=0.096 Sum_probs=72.7
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9887999999999998643013222344258843100236887432211210023-863334210123101256765788
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADSY 128 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~~ 128 (325)
.+.++.+|+..+++.+.++ .|++||-||++.+.+. -...+..++-.-|++ .++++.|+..|.+++.|+..|.+.
T Consensus 21 ~~~~~~~L~~~~i~~l~~~---~~~~Id~vi~G~v~~~--g~n~aR~aaL~aGlp~~vp~~tVnr~C~SGl~Av~~aa~~ 95 (361)
T PRK06690 21 KDYEVQQLAAPLLTFLSKG---MERAIDDVILGNVVGP--GGNVARLSALEAGLGLHIPGVTIDRQCGAGLEAIRTACHF 95 (361)
T ss_pred CCCCHHHHHHHHHHHHHHC---CCCCCCEEEEEECCCC--CCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHH
T ss_conf 8998899999999999727---9111685999956776--7509999999759998887588875315889999999999
Q ss_pred HHCCC-CEEEEEEECCCCCC
Q ss_conf 74388-50588620122444
Q gi|254780489|r 129 INSHQ-KPVLIIAANLLSRR 147 (325)
Q Consensus 129 i~~g~-~~vLVv~~e~~S~~ 147 (325)
|++|. +-++..+.|.+|+.
T Consensus 96 I~~G~~dvviAGGvEsmS~~ 115 (361)
T PRK06690 96 IQGGAGKCYIAGGVESTSTS 115 (361)
T ss_pred HHCCCCCEEEECCCCHHCCC
T ss_conf 96799998998470140125
No 107
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.17 E-value=1e-09 Score=83.32 Aligned_cols=272 Identities=18% Similarity=0.232 Sum_probs=157.8
Q ss_pred CCCEEEEEEEEECCCCCCCHHHHHHHHCCC--HHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf 662099999973588613888999880999--768311147508899489887999999999998643013222344258
Q gi|254780489|r 3 KSSSCILGFGHAVPNQCIHNSIIERHLNLK--LGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTL 80 (325)
Q Consensus 3 ~~~~~I~g~g~~lP~~~i~n~~l~~~~~~~--~~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii 80 (325)
.+..+|+++++..-+.- .+--+.+.|+.- +.+.-+++ ++.--..|-.+|++.||++++++++|||+++
T Consensus 11 ~~~p~I~~~asvvGpkE-g~GPL~~~FD~i~~D~~~G~~s---------wEkAE~~m~~~A~~~al~Ka~l~~~dId~~~ 80 (334)
T PRK12404 11 ENKPVIIATGVVGGPFE-AKGKIPEDFDTLHEDLWLGQDS---------YEKAHKKLFEEACSRATEKAKLRKDDIQFVL 80 (334)
T ss_pred CCCCEEEEEEEEECCCC-CCCCCHHHCCEEECCCCCCCCC---------HHHHHHHHHHHHHHHHHHHCCCCHHHCEEEE
T ss_conf 79988999767877735-6688755387340364457243---------9999999999999999987499978864896
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCEEEEEEECCCC---CCCC----CC-
Q ss_conf 8431002368874322112100238633342101231012567657887438-8505886201224---4446----22-
Q gi|254780489|r 81 LATSTPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYINSH-QKPVLIIAANLLS---RRIN----LE- 151 (325)
Q Consensus 81 ~~s~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~g-~~~vLVv~~e~~S---~~~d----~~- 151 (325)
.+--. .+..+ +++.++.|++| -|.+=.+|+.+..+|.+|.-++.+| ++++|..++-.++ |.+. |.
T Consensus 81 aGDLl-nQ~i~--ssf~ar~l~iP---f~GlyGACST~~E~L~laa~~vd~g~A~~vla~tSSH~~tAErQFR~P~EyG~ 154 (334)
T PRK12404 81 AGDLI-NQITP--TSFAARTLGTP---YLGLFGACSTSMEGLALGASIVNAKGAKYLLTGASSHNTAVEKQFRYPTEYGG 154 (334)
T ss_pred ECHHH-HHHHH--HHHHHHHCCCC---EEEHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCHHHHHHCCCCHHCCC
T ss_conf 12244-32578--77889864998---01113566778999999999984665435023204452036654258221167
Q ss_pred CC-CCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCH
Q ss_conf 24-43432544200112205765444531135532136776527830698667654455655232245145434320100
Q gi|254780489|r 152 DK-DTAIIFGDAAGAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIM 230 (325)
Q Consensus 152 d~-~~~~lfGDgA~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~ 230 (325)
+| .++--==-||+|+||++.. +.+.|....+. ++.+.|-.+|... |.. ..+..
T Consensus 155 QrpptAqWTVTGaGa~il~~~~--~~p~It~~TiG---------kVvD~Gi~D~~nM-----------GaA----MAPAA 208 (334)
T PRK12404 155 QKPPTAQWTVTGAGAAILSKTG--HGPRVTSATIG---------RVVDMGLTDPFNM-----------GGA----MAPAA 208 (334)
T ss_pred CCCCCCCEEEECEEEEEEECCC--CCCEEEEEEEE---------EEEECCCCCCCCC-----------HHH----HHHHH
T ss_conf 7998662788761899994389--99779898778---------8876588884302-----------555----54789
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEECC---CCCHHHHHHHHHCCCC--HHHHHH----HHHH---C--CCC---CCCHHHHH
Q ss_conf 3678988997401200122463056---5413899999971978--657002----1854---0--933---00059999
Q gi|254780489|r 231 AQSAKQSLRKSDLQPQDINRFIPHQ---ANSRIIQKVCEKIGLS--KRIMVN----SLKD---F--GNS---SSASIPLS 293 (325)
Q Consensus 231 ~~~i~~~l~~~gl~~~did~~i~Hq---~~~~~~~~~~~~lgi~--~~~~~~----~l~~---~--GN~---~sAsi~~~ 293 (325)
...|.+.+++.|.+++|.|.++.-- .+..++..+.++-|++ ++++.+ ++++ . |-. .||.+...
T Consensus 209 ~dTI~~hf~D~g~~p~dYDlI~TGDLG~vG~~i~~~Ll~~~g~~i~~~~~~DCG~~Iy~~~Q~v~aGGSGcgCSA~V~~g 288 (334)
T PRK12404 209 VDTIEAHLRDRQIDASYYDLIVTGDLGHVGREIAYDLLHKHGTKVTSEQFQDCGLLIYREGQPVIAGASGPGCSATVVYG 288 (334)
T ss_pred HHHHHHHHHHCCCCHHHCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHH
T ss_conf 99999999970999234457996643887899999999981988874553766746346898756887653368999999
Q ss_pred -HHHHHHHCCCCCCCEEEEEEECCCCC
Q ss_conf -99999806789998999998615510
Q gi|254780489|r 294 -LSLENQRKPFQKGEKILTISCRRGND 319 (325)
Q Consensus 294 -L~~~~~~g~i~~Gd~vll~~~G~G~s 319 (325)
+-.-+++|+++ |||+++.|+=+|
T Consensus 289 ~il~~m~~g~~k---rvL~VaTGALlS 312 (334)
T PRK12404 289 HLLNRMKRGELK---KILVVATGALLS 312 (334)
T ss_pred HHHHHHHCCCCE---EEEEEECCHHCC
T ss_conf 999999648730---899997503138
No 108
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=99.16 E-value=1.7e-09 Score=82.00 Aligned_cols=240 Identities=15% Similarity=0.032 Sum_probs=133.8
Q ss_pred CCCCHHHHHHHHHHHHHHHCCC-CC-CCCCEEEEEEEEECCCCC-CC-CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 9887999999999998643013-22-234425884310023688-74-32211210023863334210123101256765
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANI-KK-DSISLTLLATSTPDHLLP-PS-SPLITHRLGLMQSGAIDLTGACAGFLYALVMA 125 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~-~~-~dId~ii~~s~t~d~~~P-~~-a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A 125 (325)
++-+..+|+.+|+++||++||+ +| .|||.++.+. +++... .. .....+.+|....+ +...|.++..++..|
T Consensus 19 ~d~s~~eL~~eA~~~Al~DAG~~~~~~did~~~~~~--~~~~~g~~~~~~~~~~~lG~~~~p---~~~v~~~G~~al~~A 93 (375)
T PRK06066 19 PDLSFREMMFEAAVRAYEDAGGINPRRDVDAFISCQ--EDFWEGIAISDEFAPDPIGGAMRP---TMTVAGDGLQGLAHA 93 (375)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECC--CCCCCCHHHHHHHHHHHHCCCCCC---EEEEECHHHHHHHHH
T ss_conf 998999999999999999679998665600676613--333440557877658762466785---488527799999999
Q ss_pred HHHHHCC-CCEEEEEEECCCCCCC----------CC--C-----------------------------------------
Q ss_conf 7887438-8505886201224444----------62--2-----------------------------------------
Q gi|254780489|r 126 DSYINSH-QKPVLIIAANLLSRRI----------NL--E----------------------------------------- 151 (325)
Q Consensus 126 ~~~i~~g-~~~vLVv~~e~~S~~~----------d~--~----------------------------------------- 151 (325)
...|++| .+.+||++.+..|... |+ .
T Consensus 94 ~~aIaSG~~dvvlv~g~~k~s~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~al~A~rym~~yG~t~E~lA~vavk~r~~A 173 (375)
T PRK06066 94 YMHINSGLADVVVVESHAKPSDILTFPDVVKFAMDPIYLRPLGPPNPHFLAGLEAVKFMARRGVTREDLALVVEKNKKAG 173 (375)
T ss_pred HHHHHCCCCCEEEEECCCCCCCCCCCCHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 99997198888999704466776651114440468550023687659999999999999886979999999999999988
Q ss_pred --CC----------------------CC---CCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCC
Q ss_conf --24----------------------43---4325442001122057654445311355321367765278306986676
Q gi|254780489|r 152 --DK----------------------DT---AIIFGDAAGAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSP 204 (325)
Q Consensus 152 --d~----------------------~~---~~lfGDgA~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~ 204 (325)
++ .. .-..+|||+|+||..++...+..--...+...+...+ .
T Consensus 174 ~~NP~A~~~~~~t~edvl~s~~ia~PL~~~dc~~~sDGAaA~Vv~s~~~A~~~~~~pv~i~g~g~~~~-----------~ 242 (375)
T PRK06066 174 LKNPRASYASNVSLDDVLSSEYVVYPLTELDIAPFVDGAIVVVLASEEVARKLTDTPVWIKGIGWATD-----------T 242 (375)
T ss_pred HHCCHHHCCCCCCHHHHCCCCCEECCCCCCCCCCCCCCEEEEEEECHHHHHHCCCCCEEEEEEEEECC-----------C
T ss_conf 53984030699999998079765057530022667684289999358999756899889999998526-----------8
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCC--CCCCEEEECCCCCHHHHHHHHHCCCCHHH--------
Q ss_conf 54455655232245145434320100367898899740120--01224630565413899999971978657--------
Q gi|254780489|r 205 AGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQP--QDINRFIPHQANSRIIQKVCEKIGLSKRI-------- 274 (325)
Q Consensus 205 ~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~--~did~~i~Hq~~~~~~~~~~~~lgi~~~~-------- 274 (325)
......+.. ......+..+++.+.+|++. +|||.+-.|-.-....-...+.||+..+-
T Consensus 243 ~~~~~~~~~------------~~~~~~~a~~~Ay~~Agi~~p~~DiDv~elyD~ft~~~l~~lE~lG~~geg~~~~~~G~ 310 (375)
T PRK06066 243 SNLETADLG------------KAMYMRKAADMAYKMAGIASPAKEVDFAFVDDRYSYKELQHIEALGLAGKAAKDLREGY 310 (375)
T ss_pred CCCCCCCCC------------CCHHHHHHHHHHHHHCCCCCCHHHCCEEEECCCCCHHHHHHHHHCCCCCHHHHHHHCCC
T ss_conf 776622345------------33689999999999807999866661557516661999999998489842889997799
Q ss_pred ------HHHH----HHHCCCCCCCHHHHHHHHHHHHCCCC------CCCEEEEEEECCC
Q ss_conf ------0021----85409330005999999999806789------9989999986155
Q gi|254780489|r 275 ------MVNS----LKDFGNSSSASIPLSLSLENQRKPFQ------KGEKILTISCRRG 317 (325)
Q Consensus 275 ------~~~~----l~~~GN~~sAsi~~~L~~~~~~g~i~------~Gd~vll~~~G~G 317 (325)
++.| +--+||...++=...+.++..+=+=+ +|-++-+...+.|
T Consensus 311 ~~~~G~~PvNtsGG~ls~Ghp~ga~G~~~~~E~~~QLrg~ag~RQV~gA~~gl~~~~g~ 369 (375)
T PRK06066 311 FEPGGELPVNPSGGHLAKGVPLEASGLSLLLDAVEYLRQGGVERAVVASWRGIPTFTGS 369 (375)
T ss_pred CCCCCCCCEECCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCE
T ss_conf 56799820608982442898575069999999999974353043216788701337643
No 109
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.16 E-value=1.1e-09 Score=83.14 Aligned_cols=274 Identities=20% Similarity=0.263 Sum_probs=158.5
Q ss_pred CCCEEEEEEEEECCCCCCCHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
Q ss_conf 66209999997358861388899988099976831114750889948988799999999999864301322234425884
Q gi|254780489|r 3 KSSSCILGFGHAVPNQCIHNSIIERHLNLKLGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTLLA 82 (325)
Q Consensus 3 ~~~~~I~g~g~~lP~~~i~n~~l~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~ 82 (325)
.+..+|.+.++.+-+.- .+--+.+.|+.-.+. ...| +.. ++.--+.|-.+|++.||++++++++|||+++.+
T Consensus 13 ~~~p~I~s~~svvGpkE-geGPL~~~FD~i~~D--~~~g--~~s---wEkAE~~m~~~A~~~al~Ka~l~~~dId~~~aG 84 (336)
T PRK08304 13 ENPPYIISTGTIVGPKE-GEGPLGKYFDKIYDD--DYCG--EKS---WEKAESKLMSDAIQQALQKANLKESDIDYLLAG 84 (336)
T ss_pred CCCCEEEEEEEEECCCC-CCCCCHHHCCEEECC--CCCC--CCC---HHHHHHHHHHHHHHHHHHHCCCCHHHCEEEEEC
T ss_conf 79988999657866746-668774427735115--4457--142---999999999999999999749997787389722
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCEEEEEEECCCC---CCCC----CC-CC
Q ss_conf 31002368874322112100238633342101231012567657887438-8505886201224---4446----22-24
Q gi|254780489|r 83 TSTPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYINSH-QKPVLIIAANLLS---RRIN----LE-DK 153 (325)
Q Consensus 83 s~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~g-~~~vLVv~~e~~S---~~~d----~~-d~ 153 (325)
--. .+.. .+++.++.|++| -|.+=.+|+.+..+|.+|.-++.+| ++++|..++-.++ |.+. |. +|
T Consensus 85 DLl-nQ~i--~s~f~ar~l~IP---f~GlyGACST~~Esl~laa~~vdgg~A~~vla~tSSH~~tAErQFR~P~EyG~Qr 158 (336)
T PRK08304 85 DLL-NQTI--SANFVARELGIP---FLGLYGACSTMMESLALASMLIDGGFADRVLAATSSHFATAERQFRFPTEYGGQR 158 (336)
T ss_pred HHH-HHHH--HHHHHHHHCCCC---EEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHEECCCCCHHHHHHCCCCHHCCCCC
T ss_conf 245-5467--766779865998---0102567788999999999998266364531002334203665515803206779
Q ss_pred -CCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHH
Q ss_conf -4343254420011220576544453113553213677652783069866765445565523224514543432010036
Q gi|254780489|r 154 -DTAIIFGDAAGAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQ 232 (325)
Q Consensus 154 -~~~~lfGDgA~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~ 232 (325)
.++--==-||+|+||++.+. .+.|....+. ++.+.|-.+|... |.. ..+....
T Consensus 159 p~tAqwTVTGaGa~il~~~~~--~p~It~~TiG---------kVvD~Gi~D~~nM-----------GaA----MAPAA~d 212 (336)
T PRK08304 159 PPTAQWTVTGAGAVLLSKEGS--GPKITYATIG---------KVIDYGIKDPLDM-----------GAA----MAPAAAD 212 (336)
T ss_pred CCCCCEEEECEEEEEEECCCC--CCEEEEEEEE---------EEEECCCCCCCCC-----------HHH----HHHHHHH
T ss_conf 986517887517999813899--9779898678---------8876488884303-----------555----5378999
Q ss_pred HHHHHHHHHCCCCCCCCEEEECC---CCCHHHHHHHHHCCCCHHHHHH-----HHH----HC--CC---CCCCHHHHH-H
Q ss_conf 78988997401200122463056---5413899999971978657002-----185----40--93---300059999-9
Q gi|254780489|r 233 SAKQSLRKSDLQPQDINRFIPHQ---ANSRIIQKVCEKIGLSKRIMVN-----SLK----DF--GN---SSSASIPLS-L 294 (325)
Q Consensus 233 ~i~~~l~~~gl~~~did~~i~Hq---~~~~~~~~~~~~lgi~~~~~~~-----~l~----~~--GN---~~sAsi~~~-L 294 (325)
.|.+.+++.|.+++|.|.++.-- .+..+++.+.++-|++.+..+. +++ +. |- -.||.+... +
T Consensus 213 TI~~hf~Dtg~~p~dYDlIvTGDLg~vG~~i~~~Ll~e~g~~i~~~~~DCG~~iyd~e~Qdv~aGGSGcgCSAvV~~g~i 292 (336)
T PRK08304 213 TIKQHFEDTGRTPEDYDLIVTGDLGAVGREIAKELLKEEGYDISDNYNDCGVMIYDSEQQDVFAGGSGCACSAVVTYGYL 292 (336)
T ss_pred HHHHHHHHHCCCHHHCCEEEECCHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 99999998099900234899664588789999999998097855522756768763777765688765444789989998
Q ss_pred HHHHHHCCCCCCCEEEEEEECCCCC
Q ss_conf 9999806789998999998615510
Q gi|254780489|r 295 SLENQRKPFQKGEKILTISCRRGND 319 (325)
Q Consensus 295 ~~~~~~g~i~~Gd~vll~~~G~G~s 319 (325)
-.-+++|+++ |||+++.|+=+|
T Consensus 293 l~~m~~g~~k---rvL~vaTGALlS 314 (336)
T PRK08304 293 YKELQKGKLK---RVLVVATGALLS 314 (336)
T ss_pred HHHHHCCCCC---EEEEEECCHHCC
T ss_conf 9998648731---799997403138
No 110
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.09 E-value=2.3e-09 Score=81.07 Aligned_cols=223 Identities=18% Similarity=0.198 Sum_probs=134.3
Q ss_pred HHHHHHHHHHHHCCCCCCCCCE----EEEEEEEECCCCCC-------------------CCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999999986430132223442----58843100236887-------------------432211210023863334210
Q gi|254780489|r 57 IAIQAGDIALRNANIKKDSISL----TLLATSTPDHLLPP-------------------SSPLITHRLGLMQSGAIDLTG 113 (325)
Q Consensus 57 la~~Aa~~aL~~a~~~~~dId~----ii~~s~t~d~~~P~-------------------~a~~v~~~Lg~~~~~~~di~~ 113 (325)
|-.+-+-+|||+||++|+.+.- |..+....+|.... .+.+|...|+++. +++.|..
T Consensus 94 llLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l~G-Ps~~vdt 172 (1061)
T COG3321 94 LLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLSG-PSVTVDT 172 (1061)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHCCCHHEEECCC-CCCCCCC
T ss_conf 999999999997599922256742489965656664442322212355221025422021010122043457-8542223
Q ss_pred CCCCCHHHHHHHHHHHHCCCCEEEEEEECCC----------CCC--CCCC-------CCCCCCCCCCCEEEEEECCCCCC
Q ss_conf 1231012567657887438850588620122----------444--4622-------24434325442001122057654
Q gi|254780489|r 114 ACAGFLYALVMADSYINSHQKPVLIIAANLL----------SRR--INLE-------DKDTAIIFGDAAGAVVLAPSPLK 174 (325)
Q Consensus 114 ~C~g~l~aL~~A~~~i~~g~~~vLVv~~e~~----------S~~--~d~~-------d~~~~~lfGDgA~A~il~~~~~~ 174 (325)
+|++.+.|+.+|...|+.|.....++++... |+. +.++ .....+..|.|+++++|.+-...
T Consensus 173 aCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG~v~geG~g~vvLKrl~~A 252 (1061)
T COG3321 173 ACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVRGEGAGVVVLKRLSDA 252 (1061)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEHHHH
T ss_conf 67678999999999875487201320222103586044434430355866775787555786687214689986258878
Q ss_pred --CCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEE
Q ss_conf --445311355321367765278306986676544556552322451454343201003678988997401200122463
Q gi|254780489|r 175 --DKSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFI 252 (325)
Q Consensus 175 --~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i 252 (325)
++..|.++.-.|.-. ..+... .+...+ ......+++++|+++++.+++|+|+=
T Consensus 253 ~~dgd~IyavI~gsavn--------------~dG~~~---gltaP~--------~~aQ~~v~~~al~~a~i~p~tv~yvE 307 (1061)
T COG3321 253 ERDGDRIYAVIRGSAVN--------------QDGRSN---GLTAPN--------LEAQADVIREALADAGIDPATVQYVE 307 (1061)
T ss_pred HHCCCEEEEEEEEEEEE--------------CCCCCC---CCCCCC--------HHHHHHHHHHHHHHCCCCCCCCEEEE
T ss_conf 75799179999502550--------------577656---744788--------88999999999985599903351676
Q ss_pred ECCCCCHHH-----HHHHHHCCCC-HHHHH---HHHHHCCCCCCCHHHHHHH---HHHHHCCCCC
Q ss_conf 056541389-----9999971978-65700---2185409330005999999---9998067899
Q gi|254780489|r 253 PHQANSRII-----QKVCEKIGLS-KRIMV---NSLKDFGNSSSASIPLSLS---LENQRKPFQK 305 (325)
Q Consensus 253 ~Hq~~~~~~-----~~~~~~lgi~-~~~~~---~~l~~~GN~~sAsi~~~L~---~~~~~g~i~~ 305 (325)
.|.-+..+- ..+.+.++-. ++... +.-.+.||+.+|.=...|- .+++.+.+.|
T Consensus 308 aHgTGT~lGDpiE~~aL~~v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK~~Lal~~~~ip~ 372 (1061)
T COG3321 308 AHGTGTPLGDPIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIKTALALKHGYIPP 372 (1061)
T ss_pred ECCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 11477656478999889998603576773001211102367788879999999999861278798
No 111
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.02 E-value=2.9e-08 Score=73.93 Aligned_cols=266 Identities=16% Similarity=0.105 Sum_probs=141.0
Q ss_pred CCCCCEEEEEEEEECCCCCCCHHHHHHHH--CCC-----HHHEEEC-----CCCC-EEEEECC-----CCCHHHHHHHHH
Q ss_conf 96662099999973588613888999880--999-----7683111-----4750-8899489-----887999999999
Q gi|254780489|r 1 MIKSSSCILGFGHAVPNQCIHNSIIERHL--NLK-----LGVIEQK-----TGIK-YRYWAEK-----HETLTDIAIQAG 62 (325)
Q Consensus 1 M~~~~~~I~g~g~~lP~~~i~n~~l~~~~--~~~-----~~~i~~~-----tGI~-~R~~~~~-----~e~~~~la~~Aa 62 (325)
|.++.|.|+|+|..-|-- .+-+++-+.+ +.+ .+..... -.+. ..++... -.....|++.|+
T Consensus 3 M~~rRVVITGiG~VsplG-~g~~~~w~aL~~G~~~~~~d~~~~~~~~~~~~~~~d~~~~~~~~~~~r~m~~~~~~a~~AA 81 (397)
T PRK06519 3 MQPNDVVITGIGLVSSLG-EGLDAHWAALAAARVQPNVDTETFAPYPVHPLPEIDWDLQIPKRGDQRQMEAWQRLGTYAA 81 (397)
T ss_pred CCCCCEEEECHHHCCCCC-CCHHHHHHHHHCCCCCCCCCHHHCCCCCCEECCCCCHHHCCCCHHHHHCCCHHHHHHHHHH
T ss_conf 899978990804406882-8999999998779992542743258754216788883430565155532579999999999
Q ss_pred HHHHHHCCCCCC-----CCCEEEEEEEE-----------------ECC-----------CCCC---------CCCCCCCC
Q ss_conf 998643013222-----34425884310-----------------023-----------6887---------43221121
Q gi|254780489|r 63 DIALRNANIKKD-----SISLTLLATST-----------------PDH-----------LLPP---------SSPLITHR 100 (325)
Q Consensus 63 ~~aL~~a~~~~~-----dId~ii~~s~t-----------------~d~-----------~~P~---------~a~~v~~~ 100 (325)
++||++||++++ .+++++..+.. .++ ..|. .+..|.-+
T Consensus 82 ~~Al~dAGl~~~~~~~~~~gv~vgsg~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~P~~~~~~l~n~~a~~isi~ 161 (397)
T PRK06519 82 GLALDDAGIKGNEEICSTMDMIVAAGGGERDIAVDTAILNEARKGNDRGGLLNERLMTELRPTLFLAQLSNLLAGNISIV 161 (397)
T ss_pred HHHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999679998700104656799953666530442221024443345620333214566782688988776289999998
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC-EEEEEEECCCC---------------C-CCCC------CCCCCCC
Q ss_conf 0023863334210123101256765788743885-05886201224---------------4-4462------2244343
Q gi|254780489|r 101 LGLMQSGAIDLTGACAGFLYALVMADSYINSHQK-PVLIIAANLLS---------------R-RINL------EDKDTAI 157 (325)
Q Consensus 101 Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~g~~-~vLVv~~e~~S---------------~-~~d~------~d~~~~~ 157 (325)
+|++. +++-+..+|+++.+||-.|.++|+.|.. .+++-++|... + ..++ .|| ..|
T Consensus 162 ~g~~G-p~~tv~tACASg~~AIg~A~~~Ir~G~aDv~iaGGae~~~~p~~~~~~~~~~~~s~~~~~P~~a~~~~dR-~Gf 239 (397)
T PRK06519 162 HKVTG-SSRTFMGEEGAGVSAIRIALARIASGQSTHALVGGAYNAERKDMLLLYELGGLLLKDGWAPVWSRKGSAG-GGF 239 (397)
T ss_pred HCCCC-CCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC-CCE
T ss_conf 37887-6654026038899999999999977998889986201333728999999733434799992224897567-973
Q ss_pred CCCCCEEEEEECCCCCCCCC--CCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHH
Q ss_conf 25442001122057654445--3113553213677652783069866765445565523224514543432010036789
Q gi|254780489|r 158 IFGDAAGAVVLAPSPLKDKS--GILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAK 235 (325)
Q Consensus 158 lfGDgA~A~il~~~~~~~~~--~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~ 235 (325)
.+|+||+.+||+..+..... .|+.- +..++. ...+ ..++ .+...++
T Consensus 240 VlGEGAa~LVLE~~ehA~aRGA~IyaE-i~G~g~-----------~~~~-----------~~~g---------~~~~~~~ 287 (397)
T PRK06519 240 ILGSGGAFLVLESREHAEARGARPYAR-LSGVVS-----------DRAR-----------RSPG---------DVEASLE 287 (397)
T ss_pred EECCCEEEEEECCHHHHHHCCCEEEEE-EEEEEC-----------CCCC-----------CCCC---------HHHHHHH
T ss_conf 541663899973587898589926899-976405-----------8889-----------9980---------8999999
Q ss_pred HHHHHHCCCCCCCCEEEECCCCCHHHHH-----HHHHCCCCHHHHHHHHHHCCCCCCCHHHHH---HHHHHHHCCCCC
Q ss_conf 8899740120012246305654138999-----999719786570021854093300059999---999998067899
Q gi|254780489|r 236 QSLRKSDLQPQDINRFIPHQANSRIIQK-----VCEKIGLSKRIMVNSLKDFGNSSSASIPLS---LSLENQRKPFQK 305 (325)
Q Consensus 236 ~~l~~~gl~~~did~~i~Hq~~~~~~~~-----~~~~lgi~~~~~~~~l~~~GN~~sAsi~~~---L~~~~~~g~i~~ 305 (325)
.+++++++.++++ +++.|-.+..-.+. +.+..++|. -.+=.-+||+-.|+=-+- -..+++.|.|.|
T Consensus 288 ~al~~ag~~~~~~-~~~~~~tgt~~~d~~e~~al~~~~~~pV---SStKsm~GH~lGAAGAiEav~~~Lal~~g~iPP 361 (397)
T PRK06519 288 RLWSAAGGLAAPT-AVISGATGAHPATAEERAALEAHPGAPV---RGTGTLFGHLMEAQFPLGLALAALSVSRGALFP 361 (397)
T ss_pred HHHHHCCCCCCCE-EEECCCCCCCCCHHHHHHHHHHCCCCCE---ECCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 9998679997574-8984898888427999999864679967---554476510078999999999999983197189
No 112
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases; InterPro: IPR002155 Two different types of thiolase , , are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases ..
Probab=98.94 E-value=1.7e-09 Score=81.95 Aligned_cols=98 Identities=17% Similarity=0.159 Sum_probs=80.2
Q ss_pred CCCCHHHHHHHHHHHHHHHC-CCCCCCCCEEEEEEEEECCCC-CCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 98879999999999986430-132223442588431002368-87432211210023-8633342101231012567657
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNA-NIKKDSISLTLLATSTPDHLL-PPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMAD 126 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a-~~~~~dId~ii~~s~t~d~~~-P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~ 126 (325)
.+.++.||+..+.+++|+|. +++|++||.||++.+.+.--. +..+..++=.-|++ ++++|.|+..|.|+++|+..|.
T Consensus 20 ~~~~a~dL~~~~i~~ll~r~p~l~~~~iD~vi~G~V~~~g~~g~~~aR~aaL~AGl~~~vpa~tvnr~CaSGl~Av~~aa 99 (447)
T TIGR01930 20 KDLSAEDLGAAVIKELLERNPGLDPELIDDVILGNVLQAGEQGQNIARQAALAAGLPESVPALTVNRQCASGLQAVALAA 99 (447)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHH
T ss_conf 78787999999999999853688846728177610005776441489999987068987873442023242799999999
Q ss_pred HHHHCCCCEEEE-EEECCCCCC
Q ss_conf 887438850588-620122444
Q gi|254780489|r 127 SYINSHQKPVLI-IAANLLSRR 147 (325)
Q Consensus 127 ~~i~~g~~~vLV-v~~e~~S~~ 147 (325)
+.|++|...+.| -+.|.+|+.
T Consensus 100 ~~I~~G~~d~~~AGGvEsMS~~ 121 (447)
T TIGR01930 100 QKIRAGEADVVVAGGVESMSRV 121 (447)
T ss_pred HHHHCCCCCEEEEECCCCCCCC
T ss_conf 8853485016786074544667
No 113
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.89 E-value=2.7e-08 Score=74.08 Aligned_cols=212 Identities=21% Similarity=0.265 Sum_probs=122.4
Q ss_pred CCHHHHHHHHHHHHHHHCCCCC-CCCC--E-EEEEEEEEC----------------------CC----CC-CCCCCCCCC
Q ss_conf 8799999999999864301322-2344--2-588431002----------------------36----88-743221121
Q gi|254780489|r 52 ETLTDIAIQAGDIALRNANIKK-DSIS--L-TLLATSTPD----------------------HL----LP-PSSPLITHR 100 (325)
Q Consensus 52 e~~~~la~~Aa~~aL~~a~~~~-~dId--~-ii~~s~t~d----------------------~~----~P-~~a~~v~~~ 100 (325)
+....+++.|+++||++++++. .+.+ . ++.+|.... +. .| ..+..++..
T Consensus 69 d~~~~~a~~Aa~~Al~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~ 148 (412)
T COG0304 69 DRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIV 148 (412)
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHH
T ss_conf 58999999999999997599843356862799993167784125667888875278667682056665351478999998
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC-CEEEEEEECC-C--------------CCC-------CCCCCC-CCC
Q ss_conf 002386333421012310125676578874388-5058862012-2--------------444-------462224-434
Q gi|254780489|r 101 LGLMQSGAIDLTGACAGFLYALVMADSYINSHQ-KPVLIIAANL-L--------------SRR-------INLEDK-DTA 156 (325)
Q Consensus 101 Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~g~-~~vLVv~~e~-~--------------S~~-------~d~~d~-~~~ 156 (325)
+|++. +.+.+..+|+++.+++..|.++|+.|. +.+++.++|. . |.. ..|.|+ ...
T Consensus 149 ~g~~G-~~~t~~tACatg~~aIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~a~~Alst~nd~p~~asrPfd~~RdG 227 (412)
T COG0304 149 FGLKG-PNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKNRDG 227 (412)
T ss_pred HCCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 58778-76780666776888999999999739999899846533158989999998787567889953358888888997
Q ss_pred CCCCCCEEEEEECCCCCCCCC--CCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHH
Q ss_conf 325442001122057654445--311355321367765278306986676544556552322451454343201003678
Q gi|254780489|r 157 IIFGDAAGAVVLAPSPLKDKS--GILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSA 234 (325)
Q Consensus 157 ~lfGDgA~A~il~~~~~~~~~--~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i 234 (325)
|++|.||+.+||+..+..... .|. .++..++...|.+.+..+ .| +| .-..+++
T Consensus 228 FV~gEGag~lVLE~~ehA~aRGA~Iy-aei~G~g~~~Da~h~t~P---~p-------------~g--------~Ga~~am 282 (412)
T COG0304 228 FVIGEGAGALVLEELEHALARGAKIY-AEIVGYGTTSDAYHITAP---AP-------------DG--------EGAIRAM 282 (412)
T ss_pred EEEECCEEEEEECCHHHHHHCCCCEE-EEEEEEEECCCCCCCCCC---CC-------------CC--------CHHHHHH
T ss_conf 78854045788637624866899658-999877731440136789---97-------------87--------5699999
Q ss_pred HHHHHHHCCCCCCCCEEEECCCCCHHHH-----HHHHHCCCCHHHHH--HHHHHCCCCCCCH
Q ss_conf 9889974012001224630565413899-----99997197865700--2185409330005
Q gi|254780489|r 235 KQSLRKSDLQPQDINRFIPHQANSRIIQ-----KVCEKIGLSKRIMV--NSLKDFGNSSSAS 289 (325)
Q Consensus 235 ~~~l~~~gl~~~did~~i~Hq~~~~~~~-----~~~~~lgi~~~~~~--~~l~~~GN~~sAs 289 (325)
+.+|+++|++++||||+-.|--+-..-+ ++.+.++=-..+++ .+-.-+||+-.|+
T Consensus 283 ~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~Ai~~vfg~~~~~~~vsstKs~tGH~lGAa 344 (412)
T COG0304 283 RAALADAGLTPEDIDYINAHGTSTPANDKAESLAIKRVFGEHAKSLPVSSTKSLTGHTLGAA 344 (412)
T ss_pred HHHHHHCCCCHHHCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHH
T ss_conf 99999849997679989478766877659999999998422566753550440104376567
No 114
>pfam00108 Thiolase_N Thiolase, N-terminal domain. Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase.
Probab=98.89 E-value=3.4e-09 Score=80.00 Aligned_cols=98 Identities=16% Similarity=0.177 Sum_probs=83.7
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9887999999999998643013222344258843100236887432211210023-863334210123101256765788
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADSY 128 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~~ 128 (325)
.+.++.+|+..+++.+|++.+++|++||.||++.+.+...-+..+..+.-..|++ .++++.|+..|.++++|+..|...
T Consensus 22 ~~~~~~~L~~~~~~~~l~r~~~~p~~Id~vi~G~~~~~g~~~n~aR~~~l~aGlp~~vp~~tvnr~C~Sgl~Ai~~Aa~~ 101 (264)
T pfam00108 22 KDLSAVDLGAIAIKAALERAGVKPEDVDEVIMGNVLQAGEGQNPARQAALKAGIPDSVPAVTINKVCGSGLKAVALAAQA 101 (264)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHH
T ss_conf 88988999999999999985999688356888436656776629999999769998886689823201799999999999
Q ss_pred HHCCC-CEEEEEEECCCCCC
Q ss_conf 74388-50588620122444
Q gi|254780489|r 129 INSHQ-KPVLIIAANLLSRR 147 (325)
Q Consensus 129 i~~g~-~~vLVv~~e~~S~~ 147 (325)
|++|. .-+|+.+.|.+|+.
T Consensus 102 I~~G~~dv~iagGvEsmS~~ 121 (264)
T pfam00108 102 IRAGDADIVVAGGVESMSNA 121 (264)
T ss_pred HHCCCCCEEEEECCCCCCCC
T ss_conf 83798766787221356545
No 115
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=98.77 E-value=3.4e-07 Score=66.86 Aligned_cols=94 Identities=16% Similarity=0.062 Sum_probs=70.3
Q ss_pred CCCHHHHHHHHHHHHHHHCCCC-CCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 8879999999999986430132-223442588431002368874322112100238633342101231012567657887
Q gi|254780489|r 51 HETLTDIAIQAGDIALRNANIK-KDSISLTLLATSTPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYI 129 (325)
Q Consensus 51 ~e~~~~la~~Aa~~aL~~a~~~-~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i 129 (325)
..++.+|..+|++.|++++|.+ .+.||.|.+.-... +..+.....|+++||+.+..++--..|-.+--.-+..+...|
T Consensus 26 ~~ePl~Lm~~A~~~A~~DaG~~l~~~IDsI~VVr~~s-w~y~np~~~lA~rLG~~pa~~~~t~~GGn~PQ~LVneaa~rI 104 (502)
T PRK08257 26 GLEPVDLMAAAARAAAADAGADLLEAIDSVAVVNQLS-WRYRNPPGLLAERLGADPARTVYGPVGGNSPQRLVNEAALRI 104 (502)
T ss_pred CCCHHHHHHHHHHHHHHHCCCCHHHHCCEEEEECCCC-CCCCCHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHH
T ss_conf 4799999999999999860820587597898513225-647998999999739997757983699836899999999999
Q ss_pred HCC-CCEEEEEEECCCC
Q ss_conf 438-8505886201224
Q gi|254780489|r 130 NSH-QKPVLIIAANLLS 145 (325)
Q Consensus 130 ~~g-~~~vLVv~~e~~S 145 (325)
..| .+-+||+++|..+
T Consensus 105 a~Ge~~~aLI~GgEA~~ 121 (502)
T PRK08257 105 ARGEADVVLVAGAEAQS 121 (502)
T ss_pred HCCCCCEEEEECHHHHH
T ss_conf 76885479997440699
No 116
>KOG1390 consensus
Probab=98.73 E-value=1.9e-07 Score=68.53 Aligned_cols=259 Identities=18% Similarity=0.175 Sum_probs=139.5
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCC--CC-CCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 8879999999999986430132223442588431002368874322112100--23-86333421012310125676578
Q gi|254780489|r 51 HETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLG--LM-QSGAIDLTGACAGFLYALVMADS 127 (325)
Q Consensus 51 ~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg--~~-~~~~~di~~~C~g~l~aL~~A~~ 127 (325)
.-+..+|+.-|++.||+|++++|+|++-+|++.+.+-.+--+.+. |..|| ++ ...|..+|..|++++-|+-++.+
T Consensus 27 sl~A~~Lgsvaikaalera~~~~~~v~eVi~GnVl~AnlGQapaR--QaalgAGlp~sv~~tTvNkvCaSgmKAv~laaQ 104 (396)
T KOG1390 27 SLTATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPAR--QAALGAGLPYSVPATTVNKVCASGMKAVILAAQ 104 (396)
T ss_pred CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHH--HHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHH
T ss_conf 576256778999999985379878845554103012666766677--777626998521467623666656899999988
Q ss_pred HHHCCCCEE-EEEEECCCCCCC-CCCCCCC--------------------------------------------------
Q ss_conf 874388505-886201224444-6222443--------------------------------------------------
Q gi|254780489|r 128 YINSHQKPV-LIIAANLLSRRI-NLEDKDT-------------------------------------------------- 155 (325)
Q Consensus 128 ~i~~g~~~v-LVv~~e~~S~~~-d~~d~~~-------------------------------------------------- 155 (325)
-|..|...+ +.-+.|.||..- -+..|..
T Consensus 105 sI~~G~~divVaGGmEsMS~vP~~~~~R~g~~~G~~~l~Dgi~~DGL~D~y~~~~MG~~aE~~ak~~~ItRe~QD~yAI~ 184 (396)
T KOG1390 105 SIQTGHADIVVAGGMESMSNVPYLYVARGGVKYGGVQLVDGIVKDGLTDAYDKCHMGICAENTAKKYQITREEQDAYAIE 184 (396)
T ss_pred HHHCCCCCEEEECCCCHHCCCCCHHHHCCCCCCCCEEEEECHHHCCHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 98338765798625020013852313315767588044430122346777606775305866477747767652568888
Q ss_pred ----------CCCCCCCEE---------EEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCC---CCCCCCCCC
Q ss_conf ----------432544200---------1122057654445311355321367765278306986676---544556552
Q gi|254780489|r 156 ----------AIIFGDAAG---------AVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSP---AGTNTHDFY 213 (325)
Q Consensus 156 ----------~~lfGDgA~---------A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 213 (325)
.-.|+.--. -+++..++... ......-. ..........+++-.+ .........
T Consensus 185 Sy~r~~~Aq~~g~f~~EIVPV~V~~~rg~~~v~~DEe~~--k~~~~~~~---~~l~~vF~~~ggTVTaaNAS~lnDGAAA 259 (396)
T KOG1390 185 SYKRSENAQKAGKFDKEIVPVEVKTKRGETVVKKDEEPK--KGSNIEKL---SKLRPVFKEDGGTVTAANASTLNDGAAA 259 (396)
T ss_pred HHHHHHHHHHCCCCCCCEEEEEEECCCCCEEECCCHHHH--CCCCHHHH---CCCCCEEECCCCEECCCCCCCCCCCCEE
T ss_conf 678778888607788724668983277757863440120--13225553---0045336427975624534665766003
Q ss_pred CCCCCCHHHHHHHCCCH--------------------HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHH
Q ss_conf 32245145434320100--------------------3678988997401200122463056541389999997197865
Q gi|254780489|r 214 MRITNGADIFYNAVKIM--------------------AQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKR 273 (325)
Q Consensus 214 ~~~~~g~~v~~~~~~~~--------------------~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~ 273 (325)
...+-+..+.+...+.+ .-.+..+|+++|++.+|||+|=+..+=.-.--+..+.|+++++
T Consensus 260 vvL~s~e~~~~~glkPLArIv~~~dAa~~P~df~iaP~laipk~lk~aG~~~sdVd~~EiNEAFs~v~lA~iK~LgldP~ 339 (396)
T KOG1390 260 VVLMSGEAAKELGLKPLARIVAWGDAATEPIDFTIAPALAIPKALKKAGLEQSDVDYWEINEAFSVVVLANIKKLGLDPS 339 (396)
T ss_pred EEEECHHHHHHCCCCHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 67713645867698267877503541248143045657777899987285666525876644666777777887378876
Q ss_pred HHHHHH--HHCCC---CCCCHHHHHHHHHHHH--CCCCCCCEEEEEEECCCCCC
Q ss_conf 700218--54093---3000599999999980--67899989999986155102
Q gi|254780489|r 274 IMVNSL--KDFGN---SSSASIPLSLSLENQR--KPFQKGEKILTISCRRGNDR 320 (325)
Q Consensus 274 ~~~~~l--~~~GN---~~sAsi~~~L~~~~~~--g~i~~Gd~vll~~~G~G~s~ 320 (325)
|+-.+- --.|| ++.|.+...|.+.+++ |++ | |.-+.-|.|..+
T Consensus 340 kVNv~GGAValGHPlG~SGaRi~~tL~~~L~~~~g~~--G--vAaiCnGGGgas 389 (396)
T KOG1390 340 KVNVHGGAVALGHPLGMSGARILVTLLHTLEQKGGKI--G--VAAICNGGGGAS 389 (396)
T ss_pred HCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCE--E--EEEEECCCCCEE
T ss_conf 6367785453378767750539999999998607850--3--798851898500
No 117
>pfam00109 ketoacyl-synt Beta-ketoacyl synthase, N-terminal domain. The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. The N-terminal domain contains most of the structures involved in dimer formation and also the active site cysteine.
Probab=98.69 E-value=4.8e-08 Score=72.42 Aligned_cols=164 Identities=22% Similarity=0.262 Sum_probs=99.8
Q ss_pred CCEEEEEEEEECCCCCCCHHHHHHHH--CCCHHHEEEC----CC--CCEEE-------EECCC------------CCHHH
Q ss_conf 62099999973588613888999880--9997683111----47--50889-------94898------------87999
Q gi|254780489|r 4 SSSCILGFGHAVPNQCIHNSIIERHL--NLKLGVIEQK----TG--IKYRY-------WAEKH------------ETLTD 56 (325)
Q Consensus 4 ~~~~I~g~g~~lP~~~i~n~~l~~~~--~~~~~~i~~~----tG--I~~R~-------~~~~~------------e~~~~ 56 (325)
..+.|+|+|.-.|.- .+.+++-+.+ |.+ + |.+. .+ ..... ..++. ....-
T Consensus 2 ~~VvITG~G~vtp~G-~~~~~~w~~L~~G~s-~-i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~d~~~~ 78 (243)
T pfam00109 2 EPVAITGMGCRFPGG-VGPEEFWELLLAGRD-A-IREFPADLSGLYPPSRVAGEIYGFDFDAAFFGISPREAEAMDPQQR 78 (243)
T ss_pred CCEEEECCEEECCCC-CCHHHHHHHHHCCCC-E-EEECCCHHHHCCCCCCCCEECCCCCCCHHHCCCCHHHHHHCCHHHH
T ss_conf 999998668899798-999999999985998-8-8746950644479876010146778781115989999985499999
Q ss_pred HHHHHHHHHHHHCCCCCCCCC-----EEEEEEEEEC----------------------CCCCC-CCCCCCCCCCCCCCCC
Q ss_conf 999999998643013222344-----2588431002----------------------36887-4322112100238633
Q gi|254780489|r 57 IAIQAGDIALRNANIKKDSIS-----LTLLATSTPD----------------------HLLPP-SSPLITHRLGLMQSGA 108 (325)
Q Consensus 57 la~~Aa~~aL~~a~~~~~dId-----~ii~~s~t~d----------------------~~~P~-~a~~v~~~Lg~~~~~~ 108 (325)
+++.|+++||++||++++++. -|+.++.... ...|+ .+.+|+..+|++. ++
T Consensus 79 ~~~~aa~~Al~dAGl~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g~~G-p~ 157 (243)
T pfam00109 79 LALEAAWEALEDAGLDPASLRGSDRTGVFVGSGSGDYAELQALDSAGGPRRGSPYLTGAWMPSVAAGRISYRLGLRG-PS 157 (243)
T ss_pred HHHHHHHHHHHHCCCCHHHCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCC-CC
T ss_conf 99999999999849984672788728999986476489999763036743346411056451178889986741579-86
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCC-CCEEEEEEECC-CCC----------C-------CCCCCC-CCCCCCCCCEEEEEE
Q ss_conf 342101231012567657887438-85058862012-244----------4-------462224-434325442001122
Q gi|254780489|r 109 IDLTGACAGFLYALVMADSYINSH-QKPVLIIAANL-LSR----------R-------INLEDK-DTAIIFGDAAGAVVL 168 (325)
Q Consensus 109 ~di~~~C~g~l~aL~~A~~~i~~g-~~~vLVv~~e~-~S~----------~-------~d~~d~-~~~~lfGDgA~A~il 168 (325)
+-++.+|+++++||..|..+|++| .+.+++.++|. .+. . ..|-|+ ...+++|+||+++||
T Consensus 158 ~t~~~ACaSg~~AI~~A~~~I~~G~~d~~i~Gg~~~~~~~~~~~~f~~~~a~~~~~~~~rpfd~~~~G~v~GEGaa~lvL 237 (243)
T pfam00109 158 VTVDTACSSSLVALHAAVRSIRRGECDLALAGGVEAPLTPGGFAGFSAAGALLSPDGPCKAFDPFADGFVRGEGVGAVLL 237 (243)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEE
T ss_conf 46655207899999999975336983879997841556978999999747857979998887899996553614998999
Q ss_pred CCC
Q ss_conf 057
Q gi|254780489|r 169 APS 171 (325)
Q Consensus 169 ~~~ 171 (325)
++-
T Consensus 238 E~~ 240 (243)
T pfam00109 238 KEL 240 (243)
T ss_pred EEH
T ss_conf 767
No 118
>KOG1391 consensus
Probab=98.67 E-value=1.4e-06 Score=62.96 Aligned_cols=94 Identities=17% Similarity=0.279 Sum_probs=72.1
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCC----C-CCCCCCCCCCCCCCHHHHHH
Q ss_conf 988799999999999864301322234425884310023688743221121002----3-86333421012310125676
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGL----M-QSGAIDLTGACAGFLYALVM 124 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~----~-~~~~~di~~~C~g~l~aL~~ 124 (325)
.+-+..||.+.|++.||..+++.++.+|.+|++.+.. .-+.+.++.+..|+ + +.+++.||--|.++.+++..
T Consensus 24 Kg~~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~a---SSsDgIYl~RHvGL~~GvP~e~pALtiNRLCGSGFQsiVN 100 (396)
T KOG1391 24 KGLSATDLGVVAAKAALKAANVGAEAVDHVIMGNVLA---SSSDGIYLARHVGLRVGVPKETPALTINRLCGSGFQSIVN 100 (396)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEEEEE---CCCCCEEEEECCCCCCCCCCCCCCEEEHHHHCCCHHHHHH
T ss_conf 5754446788999988864388832332588711341---2577267540035322786766733430131312798986
Q ss_pred HHHHHHCCCCEE-EEEEECCCCC
Q ss_conf 578874388505-8862012244
Q gi|254780489|r 125 ADSYINSHQKPV-LIIAANLLSR 146 (325)
Q Consensus 125 A~~~i~~g~~~v-LVv~~e~~S~ 146 (325)
+.+-|.-+...+ |-=+.|.+|.
T Consensus 101 gaQ~I~vgea~ivL~GGtEnMSq 123 (396)
T KOG1391 101 GAQEICVGEAEIVLCGGTENMSQ 123 (396)
T ss_pred HHHHHHCCCCEEEEECCCCCCCC
T ss_conf 67776307615998447452345
No 119
>KOG1389 consensus
Probab=98.63 E-value=4e-07 Score=66.44 Aligned_cols=269 Identities=14% Similarity=0.123 Sum_probs=137.7
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCC-CCCCCC-CCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 98879999999999986430132223442588431002368874322112-100238-6333421012310125676578
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITH-RLGLMQ-SGAIDLTGACAGFLYALVMADS 127 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~-~Lg~~~-~~~~di~~~C~g~l~aL~~A~~ 127 (325)
.+..+-+|-..+.|..+++.+++|+.|.-|+++++.....- +..++++. .-|.+. .+..-+|--|+++++|......
T Consensus 57 kdt~pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~g-a~e~R~a~~~ag~P~tvpv~tvNRqCsSGLqaVadiA~ 135 (435)
T KOG1389 57 KDTRPDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSG-ASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADIAA 135 (435)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHHCCEEEEECCCCCCC-HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 55882899999999997651899789501355210377753-68988999971898656025664342147789999998
Q ss_pred HHHCCC-CEEEEEEECCCCCCCC--CCCC-C----------CC------------CCCC------CCEEEEEECC-----
Q ss_conf 874388-5058862012244446--2224-4----------34------------3254------4200112205-----
Q gi|254780489|r 128 YINSHQ-KPVLIIAANLLSRRIN--LEDK-D----------TA------------IIFG------DAAGAVVLAP----- 170 (325)
Q Consensus 128 ~i~~g~-~~vLVv~~e~~S~~~d--~~d~-~----------~~------------~lfG------DgA~A~il~~----- 170 (325)
-|++|. .-.|-.+.|-+|..+. |... . .+ -.|| |-++..--.+
T Consensus 136 ~Ir~G~ydIGla~GvESMt~~~~~g~~g~~~~~~~~~~~A~dCllpmGitsEnva~rfgvsR~eqD~~Av~S~kkAa~A~ 215 (435)
T KOG1389 136 KIRAGFYDIGLAAGVESMTTNYPRGWPGSINPRLQKFEKARDCLLPMGITSENVAERFGVSREEQDEAAVDSHKKAAAAT 215 (435)
T ss_pred HHHCCCEEEECCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 87448366300135112103678888666584243315776144322531577898729776564688888789999876
Q ss_pred CCCCCCCCCEEEEE-EECCCCCC---EEEEECCC----------------------C---CCCCCCCCCCCCC-----CC
Q ss_conf 76544453113553-21367765---27830698----------------------6---6765445565523-----22
Q gi|254780489|r 171 SPLKDKSGILGIEL-TSDGSKYD---LIKIPTGG----------------------S---TSPAGTNTHDFYM-----RI 216 (325)
Q Consensus 171 ~~~~~~~~il~~~~-~s~~~~~~---~~~~~~~~----------------------~---~~~~~~~~~~~~~-----~~ 216 (325)
....-...|+...+ ..|+...+ .+..+.|- + ...........-+ .+
T Consensus 216 ~~G~f~dEIiPv~tkv~D~~g~~k~i~v~~DeGiRp~ttl~~l~klkpvFkkdGttTagNsSQvSDGa~aVLLmkRs~A~ 295 (435)
T KOG1389 216 AKGKFKDEIIPVKTKVVDPKGDEKPITVSVDEGIRPNTTLESLAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 295 (435)
T ss_pred HCCCCHHHEEEEEEECCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHH
T ss_conf 44863233211001215886775662673478878776566776343142217820357631125553564443665676
Q ss_pred CCCH---HHHH-HHCCCHH---------HHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHH-----
Q ss_conf 4514---5434-3201003---------67898899740120012246305654138999999719786570021-----
Q gi|254780489|r 217 TNGA---DIFY-NAVKIMA---------QSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNS----- 278 (325)
Q Consensus 217 ~~g~---~v~~-~~~~~~~---------~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~----- 278 (325)
+.|- .+|+ |+.--++ -.|..+|+.+||..+|||+|=++.+=..-.-...++|+|++||+-.+
T Consensus 296 qlgLPvlgvfr~f~~vGv~P~iMGiGPavAIp~alk~aGL~v~did~FEINEAFAsQ~~yc~~KL~ld~ekVN~~GGaiA 375 (435)
T KOG1389 296 QLGLPVLGVFRDFAAVGVPPAIMGIGPAVAIPKALKAAGLEVDDIDLFEINEAFASQALYCRNKLGLDPEKVNVNGGAIA 375 (435)
T ss_pred HCCCCEEEEEEEEEEECCCHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEE
T ss_conf 54995467765324406888983877243428899874985223541323388888899999873898888488886233
Q ss_pred -HHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC
Q ss_conf -854093300059999999998067899989999986155102
Q gi|254780489|r 279 -LKDFGNSSSASIPLSLSLENQRKPFQKGEKILTISCRRGNDR 320 (325)
Q Consensus 279 -l~~~GN~~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~G~s~ 320 (325)
-.-.|-||+-.+-..|+++-+++.=.+.- |+-+-.|.|+..
T Consensus 376 lGHPlGatGAR~VaTlL~emKrrgkd~~~G-VvSmCIGtGmGa 417 (435)
T KOG1389 376 LGHPLGATGARCVATLLHEMKRRGKDCRFG-VVSMCIGTGMGA 417 (435)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCCCC-EEEEEECCCCCH
T ss_conf 068757741759999999998633255555-688852478532
No 120
>KOG1394 consensus
Probab=98.56 E-value=7e-07 Score=64.84 Aligned_cols=254 Identities=20% Similarity=0.259 Sum_probs=139.6
Q ss_pred CCEEEEEEEEECCCCCCCHHHHHHHHC----CC----H----------HHEEECCCCCEEEEECCCC----CHHHHHHHH
Q ss_conf 620999999735886138889998809----99----7----------6831114750889948988----799999999
Q gi|254780489|r 4 SSSCILGFGHAVPNQCIHNSIIERHLN----LK----L----------GVIEQKTGIKYRYWAEKHE----TLTDIAIQA 61 (325)
Q Consensus 4 ~~~~I~g~g~~lP~~~i~n~~l~~~~~----~~----~----------~~i~~~tGI~~R~~~~~~e----~~~~la~~A 61 (325)
..+.|+|+|.-.|--.=.+......+. ++ + ++|.+.. .+-||...++ +..-+++.|
T Consensus 24 rRVVITGmG~VTplG~~v~~~w~~Ll~GesGI~~l~~~d~k~~p~~v~g~Ip~f~--~e~~~s~~~~r~ms~~~~~al~a 101 (440)
T KOG1394 24 RRVVITGMGAVTPLGNGVHTSWRNLLSGESGISSLEGPDYKSIPFTVAGKIPRFS--VEDYVSKGDERRMSKFTKLALTA 101 (440)
T ss_pred EEEEEECCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEEECCCCC--CCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 0599955634202777757789876536667421466420247620113056633--11443624466655789999999
Q ss_pred HHHHHHHCCCCCC---CCCEE----EEEEEEE---------------------CCCCC----CC-CCCCCCCCCCCCCCC
Q ss_conf 9998643013222---34425----8843100---------------------23688----74-322112100238633
Q gi|254780489|r 62 GDIALRNANIKKD---SISLT----LLATSTP---------------------DHLLP----PS-SPLITHRLGLMQSGA 108 (325)
Q Consensus 62 a~~aL~~a~~~~~---dId~i----i~~s~t~---------------------d~~~P----~~-a~~v~~~Lg~~~~~~ 108 (325)
+++||+++++.+. +.|.. ..++.-. ++..| ++ +.+|.-++|+.. +.
T Consensus 102 a~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~~gl~G-pn 180 (440)
T KOG1394 102 AEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMKYGLRG-PN 180 (440)
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHCCCC-CC
T ss_conf 99999736888864124554410458514633299999999999872234338630006650365103345315767-76
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEE-CCC---------------CC-CCCCC------C-CCCCCCCCCCEE
Q ss_conf 342101231012567657887438850588620-122---------------44-44622------2-443432544200
Q gi|254780489|r 109 IDLTGACAGFLYALVMADSYINSHQKPVLIIAA-NLL---------------SR-RINLE------D-KDTAIIFGDAAG 164 (325)
Q Consensus 109 ~di~~~C~g~l~aL~~A~~~i~~g~~~vLVv~~-e~~---------------S~-~~d~~------d-~~~~~lfGDgA~ 164 (325)
..++.+|+.+.+++--+.++|+-|...+.|.++ |.+ |+ .-||. | ....|..|.|++
T Consensus 181 hsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~~RdGFVmGEGag 260 (440)
T KOG1394 181 HSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDKKRDGFVMGEGAG 260 (440)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCEE
T ss_conf 16676665143058888878870765455226753000522234378877764158993103788866777356506605
Q ss_pred EEEECCCCCCCCC--CCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHC
Q ss_conf 1122057654445--31135532136776527830698667654455655232245145434320100367898899740
Q gi|254780489|r 165 AVVLAPSPLKDKS--GILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSD 242 (325)
Q Consensus 165 A~il~~~~~~~~~--~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~g 242 (325)
.++++.=+...+. .|+ .++.-++-..|.+.+..+ ..+|. -...+++++|+++|
T Consensus 261 vlvlEelEHA~~RgA~I~-AE~lGygls~Da~HiT~P----------------~~dG~--------Ga~~am~raL~~Ag 315 (440)
T KOG1394 261 VLVLEELEHAKKRGAPIY-AEVLGYGLSSDAYHITSP----------------DPDGA--------GAVLAMERALKDAG 315 (440)
T ss_pred EEEHHHHHHHHHCCCCEE-HHHHCCCCCCCCCCCCCC----------------CCCCC--------HHHHHHHHHHHHCC
T ss_conf 876186788987499152-776457525663434789----------------98730--------58999999998749
Q ss_pred CCCCCCCEEEECCCCCHHH-----HHHHHHCCCCHH--HHHHHHHHCCCC
Q ss_conf 1200122463056541389-----999997197865--700218540933
Q gi|254780489|r 243 LQPQDINRFIPHQANSRII-----QKVCEKIGLSKR--IMVNSLKDFGNS 285 (325)
Q Consensus 243 l~~~did~~i~Hq~~~~~~-----~~~~~~lgi~~~--~~~~~l~~~GN~ 285 (325)
++|+||||+=-|.-+-..- +++.+.|+-... ++-.+=--.||+
T Consensus 316 l~pe~i~YvNAHATST~~GD~aE~~Ai~~vf~~~~~~~~vsStKgaiGHL 365 (440)
T KOG1394 316 LSPEDIDYVNAHATSTPLGDAAEAEAIKRVFGEHNIASKVSSTKGAIGHL 365 (440)
T ss_pred CCHHHCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
T ss_conf 99565570530333576730899999999841478654213565135420
No 121
>KOG1406 consensus
Probab=98.54 E-value=6.2e-08 Score=71.73 Aligned_cols=91 Identities=22% Similarity=0.229 Sum_probs=72.6
Q ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf 79999999999986430132223442588431002368874322112100238633342101231012567657887438
Q gi|254780489|r 53 TLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYINSH 132 (325)
Q Consensus 53 ~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~g 132 (325)
.-.||+.+|..+||+++++.-++|+.-+.+-...|.. +.-+-..++|+..++.|.+++.|+.+..||-++.+.|++|
T Consensus 28 dypd~a~ea~tkal~da~ikys~vqqa~vgyvfgdst---cgqraiyevgmtgipi~nvnnncatgssalflakqiiesg 104 (408)
T KOG1406 28 DYPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDST---CGQRAIYEVGMTGIPIYNVNNNCATGSSALFLAKQIIESG 104 (408)
T ss_pred CCCHHHHHHHHHHHHHCCCCHHHHHHHHHEEEECCCC---CCHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCC
T ss_conf 6707899999988886299779987664124525875---3067888704667624623675356704889999998657
Q ss_pred -CCEEEEEEECCCCC
Q ss_conf -85058862012244
Q gi|254780489|r 133 -QKPVLIIAANLLSR 146 (325)
Q Consensus 133 -~~~vLVv~~e~~S~ 146 (325)
...+|..+-|.+++
T Consensus 105 n~dcvlalgfekm~~ 119 (408)
T KOG1406 105 NSDCVLALGFEKMER 119 (408)
T ss_pred CCCEEEEECHHHCCC
T ss_conf 753587613023077
No 122
>KOG1202 consensus
Probab=98.15 E-value=2e-05 Score=55.29 Aligned_cols=215 Identities=20% Similarity=0.287 Sum_probs=118.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCC-----EEEEEE--EEECCC--CCC----------CCCCCCCCCCCC---CCCCCCC
Q ss_conf 999999999998643013222344-----258843--100236--887----------432211210023---8633342
Q gi|254780489|r 54 LTDIAIQAGDIALRNANIKKDSIS-----LTLLAT--STPDHL--LPP----------SSPLITHRLGLM---QSGAIDL 111 (325)
Q Consensus 54 ~~~la~~Aa~~aL~~a~~~~~dId-----~ii~~s--~t~d~~--~P~----------~a~~v~~~Lg~~---~~~~~di 111 (325)
..-|-.++--+|+-++|++|+|+. .-|-+| .|...+ .|. .-++.++++-.. +-+.|.+
T Consensus 87 ~lRlLLE~t~EAivDaGiNP~dLRGsrTGV~vG~S~sETs~~l~~d~dtv~GY~ltGC~RaMfaNRiSytFDf~GPSfsv 166 (2376)
T KOG1202 87 QLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQGPSFSV 166 (2376)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCEEEEEECCCCCEEE
T ss_conf 99999998899998368886663764431799735543443224798600331014778998633405899536883455
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCC-EEEEEEECCC-----C-CCCC---CCCCCC---------CCCCCCCEEEEEECCCC
Q ss_conf 10123101256765788743885-0588620122-----4-4446---222443---------43254420011220576
Q gi|254780489|r 112 TGACAGFLYALVMADSYINSHQK-PVLIIAANLL-----S-RRIN---LEDKDT---------AIIFGDAAGAVVLAPSP 172 (325)
Q Consensus 112 ~~~C~g~l~aL~~A~~~i~~g~~-~vLVv~~e~~-----S-~~~d---~~d~~~---------~~lfGDgA~A~il~~~~ 172 (325)
..+|++.+.||+.|.+-|++|+- .++|.++... | +++. .++..+ ..-=.||.+|++|.+..
T Consensus 167 DTACSSSL~ALq~A~~~ir~Gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~~avllqrk~ 246 (2376)
T KOG1202 167 DTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGVVAVLLQRKS 246 (2376)
T ss_pred ECHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEECCCHHHHHHHHCCCCCCCCCCCHHCCCCCEEECCCEEEEEEEHHH
T ss_conf 12456889999999999864688466410562575441456778743758898610010037823512756999874457
Q ss_pred CCCC--CCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCE
Q ss_conf 5444--53113553213677652783069866765445565523224514543432010036789889974012001224
Q gi|254780489|r 173 LKDK--SGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQDINR 250 (325)
Q Consensus 173 ~~~~--~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~ 250 (325)
...+ ..|+.....|||-.-..+.+| .| +.-.+.+++...+.|+.|+++-|
T Consensus 247 ~ArRvYAtilnartNTDGfKEqGvTfP--------------------~G--------~~Q~qLi~e~Yse~Gl~P~sv~Y 298 (2376)
T KOG1202 247 LARRVYATILNARTNTDGFKEQGVTFP--------------------SG--------DMQEQLIRETYSEAGLNPESVVY 298 (2376)
T ss_pred HHHHHHHHHHCCCCCCCCHHHCCCCCC--------------------CC--------HHHHHHHHHHHHHCCCCCCCEEE
T ss_conf 787888875204557874221386578--------------------80--------79999999999861989232799
Q ss_pred EEECCCCCHH---------HHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHH
Q ss_conf 6305654138---------9999997197865700218540933000599999999
Q gi|254780489|r 251 FIPHQANSRI---------IQKVCEKIGLSKRIMVNSLKDFGNSSSASIPLSLSLE 297 (325)
Q Consensus 251 ~i~Hq~~~~~---------~~~~~~~lgi~~~~~~~~l~~~GN~~sAsi~~~L~~~ 297 (325)
+=-|-.+.+. .+.+++.=--| =-+-++-.+.||.-.||=..+|...
T Consensus 299 vEAHGtGTkVGDpQEaN~it~~fC~~Rt~p-LLIGSvKSNMGHaEPASGv~alaKi 353 (2376)
T KOG1202 299 VEAHGTGTKVGDPQEANGITRFFCATRTTP-LLIGSVKSNMGHAEPASGVCALAKI 353 (2376)
T ss_pred EEECCCCCCCCCHHHHHHHHHHHHHCCCCC-EEEEECCCCCCCCCCCCHHHHHHHH
T ss_conf 972167787799678736889885158873-2765202457999864007899999
No 123
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=98.11 E-value=4.2e-06 Score=59.79 Aligned_cols=95 Identities=19% Similarity=0.128 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHHHC--CCCCCCCCEEEEEEEEECC-CCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 9999999999986430--1322234425884310023-68874322112100238-633342101231012567657887
Q gi|254780489|r 54 LTDIAIQAGDIALRNA--NIKKDSISLTLLATSTPDH-LLPPSSPLITHRLGLMQ-SGAIDLTGACAGFLYALVMADSYI 129 (325)
Q Consensus 54 ~~~la~~Aa~~aL~~a--~~~~~dId~ii~~s~t~d~-~~P~~a~~v~~~Lg~~~-~~~~di~~~C~g~l~aL~~A~~~i 129 (325)
..++.....+..+++. ++++.+||-++.++..+.. ..+..+..++..+|++. .+++.++.+|.+++.++..|...|
T Consensus 27 ~e~l~~a~~~a~~~~~~~~vd~~~v~~vi~G~~~~~g~~~~~~ar~~a~~aGl~~~~p~~~V~~~c~SG~~Av~~A~~~I 106 (392)
T COG0183 27 AEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAI 106 (392)
T ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHEEECCCCCHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHH
T ss_conf 99999999997644222049855410214401341100335388999998599989870899645711999999999999
Q ss_pred HCC-CCEEEEEEECCCCCCC
Q ss_conf 438-8505886201224444
Q gi|254780489|r 130 NSH-QKPVLIIAANLLSRRI 148 (325)
Q Consensus 130 ~~g-~~~vLVv~~e~~S~~~ 148 (325)
++| .+-+|+++.|.+|+..
T Consensus 107 ~sG~~dvvlagG~E~mS~~~ 126 (392)
T COG0183 107 ASGEADVVLAGGVEKMSDAP 126 (392)
T ss_pred HCCCCCEEEEEEECCCCCCC
T ss_conf 77998889998561145687
No 124
>pfam08540 HMG_CoA_synt_C Hydroxymethylglutaryl-coenzyme A synthase C terminal.
Probab=98.02 E-value=5.6e-05 Score=52.39 Aligned_cols=107 Identities=19% Similarity=0.220 Sum_probs=65.3
Q ss_pred CCHHHHHHHCCCHHHHHHHHHHH---------HCCCCCCCCEEEECCCCCHHHHHHHHHC--------------------
Q ss_conf 51454343201003678988997---------4012001224630565413899999971--------------------
Q gi|254780489|r 218 NGADIFYNAVKIMAQSAKQSLRK---------SDLQPQDINRFIPHQANSRIIQKVCEKI-------------------- 268 (325)
Q Consensus 218 ~g~~v~~~~~~~~~~~i~~~l~~---------~gl~~~did~~i~Hq~~~~~~~~~~~~l-------------------- 268 (325)
||+.-....++.+-.+.+...++ .+...+++|++++|.+.-++.++-..+|
T Consensus 31 DGk~Si~cYl~ALd~cy~~Y~~K~~~~~~~~~~~~~ld~fd~~~FH~Py~KlvqKs~arl~~nD~~~~~~~~~~~~~~~~ 110 (282)
T pfam08540 31 DGKLSLQCYLKALDSCYKNYCKKIEKQTKDGGTKFGLDDFDYVIFHSPYCKLVQKSLARLLYNDFLRNPSSDKGNGVYEK 110 (282)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHH
T ss_conf 72889999999999999999999873002367766376677899857544899999999998765306552011000111
Q ss_pred -----CCCHH----------------------HH-HH--HHHHCCCCCCCHHHHHHHHHHHHCCC--CCCCEEEEEEECC
Q ss_conf -----97865----------------------70-02--18540933000599999999980678--9998999998615
Q gi|254780489|r 269 -----GLSKR----------------------IM-VN--SLKDFGNSSSASIPLSLSLENQRKPF--QKGEKILTISCRR 316 (325)
Q Consensus 269 -----gi~~~----------------------~~-~~--~l~~~GN~~sAsi~~~L~~~~~~g~i--~~Gd~vll~~~G~ 316 (325)
+++.+ |+ +. .-.++||+.+||++.+|.-++..... -.|++|.++|.|+
T Consensus 111 l~~~~~~~~e~s~~dk~~ek~~~~~sk~~f~~kv~psl~~~~~vGNmYTaSlY~~L~SLL~~~~~~~L~GkRIg~FSYGS 190 (282)
T pfam08540 111 LEALGGLKLEDSYTDRDLEKAFMQLSKPLFKKKTKPSLLLPTQVGNMYTASLYAALASLLSHVSADELAGKRIGMFSYGS 190 (282)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCC
T ss_conf 10001464454010068999999870898986326187887860750069999999999843775234899899985166
Q ss_pred CCCCCCCC
Q ss_conf 51020101
Q gi|254780489|r 317 GNDRGIYC 324 (325)
Q Consensus 317 G~s~ga~l 324 (325)
|..+-.+.
T Consensus 191 Glaas~FS 198 (282)
T pfam08540 191 GLAASLFS 198 (282)
T ss_pred CCCEEEEE
T ss_conf 61124675
No 125
>KOG1392 consensus
Probab=97.42 E-value=0.00039 Score=46.92 Aligned_cols=111 Identities=17% Similarity=0.196 Sum_probs=77.7
Q ss_pred EEECCCCCEEEEEC----CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC-CCCCCC
Q ss_conf 31114750889948----9887999999999998643013222344258843100236887432211210023-863334
Q gi|254780489|r 36 IEQKTGIKYRYWAE----KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLM-QSGAID 110 (325)
Q Consensus 36 i~~~tGI~~R~~~~----~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~-~~~~~d 110 (325)
|.---|+++-++.. .+.-+-||+-+|...+|++..++.+.||+|||+++-.+--.-..|..-+-.-|.+ ..++-.
T Consensus 44 ivlvdgvrtpfl~sgt~ykdlmphdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdktpaht 123 (465)
T KOG1392 44 IVLVDGVRTPFLVSGTVYKDLMPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKTPAHT 123 (465)
T ss_pred EEEEECCCCCEEECCCCHHHHCHHHHHHHHHHHHHHHCCCCHHHHCEEEEHHHHHHHHCCHHHHHHHHHCCCCCCCCCCE
T ss_conf 69980365753652620553060588999999998752598888334530345777750128889998658988886415
Q ss_pred CCCCCCCCHHHHHHHHHHHHCCCCEEEEEEE-CCCCC
Q ss_conf 2101231012567657887438850588620-12244
Q gi|254780489|r 111 LTGACAGFLYALVMADSYINSHQKPVLIIAA-NLLSR 146 (325)
Q Consensus 111 i~~~C~g~l~aL~~A~~~i~~g~~~vLVv~~-e~~S~ 146 (325)
+.++|-+.-.|+-....+|++|...+.|.++ |.+|.
T Consensus 124 vtmacissn~amttgmgliatg~~dvivaggvelmsd 160 (465)
T KOG1392 124 VTMACISSNVAMTTGMGLIATGNADVIVAGGVELMSD 160 (465)
T ss_pred EEEEHHCCCHHHHCCCEEEEECCCCEEEECCEEECCC
T ss_conf 6521010351433062057507767798756554026
No 126
>pfam00195 Chal_sti_synt_N Chalcone and stilbene synthases, N-terminal domain. The C-terminal domain of Chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in this N-terminal domain.
Probab=96.66 E-value=0.0087 Score=38.07 Aligned_cols=92 Identities=15% Similarity=0.181 Sum_probs=60.0
Q ss_pred HHHH-HHCCCHHHHHHHHHHHHCCCCCCCCEEEECC----CCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf 5434-3201003678988997401200122463056----5413899999971978657002185409330005999999
Q gi|254780489|r 221 DIFY-NAVKIMAQSAKQSLRKSDLQPQDINRFIPHQ----ANSRIIQKVCEKIGLSKRIMVNSLKDFGNSSSASIPLSLS 295 (325)
Q Consensus 221 ~v~~-~~~~~~~~~i~~~l~~~gl~~~did~~i~Hq----~~~~~~~~~~~~lgi~~~~~~~~l~~~GN~~sAsi~~~L~ 295 (325)
++|. .+.+...+..+++|++.|+.++||+|+|+-. ....+--.++++||++++-....+--.|.-+.. ..|.
T Consensus 96 ~~~~~~a~~La~~Aa~~AL~~aG~~~~dIthlv~vt~TG~~~Pg~d~~l~~~LGL~~~v~R~~i~~~GC~gg~---~gL~ 172 (228)
T pfam00195 96 DIAVVEVPKLGKEAALKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRVMLYQQGCFAGG---TVLR 172 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCHHEEEECCCCHHHH---HHHH
T ss_conf 9999999999999999999995889889999999947999887478999998298987211141145416489---9999
Q ss_pred HHHHHCCCCCCCEEEEEEEC
Q ss_conf 99980678999899999861
Q gi|254780489|r 296 LENQRKPFQKGEKILTISCR 315 (325)
Q Consensus 296 ~~~~~g~i~~Gd~vll~~~G 315 (325)
.+-+--+-.||.+||+++..
T Consensus 173 ~A~~~~~~~p~~~VLvv~~E 192 (228)
T pfam00195 173 LAKDLAENNKGARVLVVCSE 192 (228)
T ss_pred HHHHHHHHCCCCEEEEEEEE
T ss_conf 99999982999879999824
No 127
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=96.46 E-value=0.0093 Score=37.89 Aligned_cols=69 Identities=14% Similarity=0.190 Sum_probs=49.1
Q ss_pred HHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHH--HHHCCCCCCCH---HHHHHHHHHHH
Q ss_conf 67898899740120012246305654138999999719786570021--85409330005---99999999980
Q gi|254780489|r 232 QSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNS--LKDFGNSSSAS---IPLSLSLENQR 300 (325)
Q Consensus 232 ~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~--l~~~GN~~sAs---i~~~L~~~~~~ 300 (325)
..++++|+++|++++|||.|=+|-+-....-.+.+.||++++|+-.+ .--+||=-.|| +.+.|.+.+++
T Consensus 292 ~A~~k~L~~agl~~~Did~~EinEAFA~~~l~~~~~l~~d~~kvN~~GGaiA~GHP~GaTGar~~~~l~~~L~~ 365 (390)
T PRK06504 292 PATERALKKAGMKIDDIDLYEVNEAFASVPLAWLKATGADPERLNVNGGAIALGHPLGASGTKLMTTLIHALKQ 365 (390)
T ss_pred HHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 99999999859981138854510355888999999848986767888639872989130799999999999998
No 128
>PRK06845 consensus
Probab=96.38 E-value=0.015 Score=36.58 Aligned_cols=58 Identities=19% Similarity=0.238 Sum_probs=43.9
Q ss_pred HHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHH--HHHCCCCCCCH
Q ss_conf 67898899740120012246305654138999999719786570021--85409330005
Q gi|254780489|r 232 QSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNS--LKDFGNSSSAS 289 (325)
Q Consensus 232 ~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~--l~~~GN~~sAs 289 (325)
..++++|+++|++++|||.|=.|-+-....-.+.+.|||+++++-.+ +--+||=-.||
T Consensus 294 ~A~~~al~~agl~~~Did~~EinEAFA~~~l~~~~~lgl~~~~vN~~GGaiA~GHPiGAT 353 (392)
T PRK06845 294 PAIRAALERAGLTLSDMDLVEVNEAFAAQYLAVEKELGLNPEITNVNGGAIALGHPLGAS 353 (392)
T ss_pred HHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCC
T ss_conf 999999998599965688667614678899999997098915428884188609881104
No 129
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases; InterPro: IPR002155 Two different types of thiolase , , are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases ..
Probab=96.31 E-value=0.002 Score=42.32 Aligned_cols=132 Identities=20% Similarity=0.241 Sum_probs=77.1
Q ss_pred CCCCCEEEEEECCCCCCCCCCC--EEE-EEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCH-HHHHHHCCCHHHH
Q ss_conf 2544200112205765444531--135-53213677652783069866765445565523224514-5434320100367
Q gi|254780489|r 158 IFGDAAGAVVLAPSPLKDKSGI--LGI-ELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGA-DIFYNAVKIMAQS 233 (325)
Q Consensus 158 lfGDgA~A~il~~~~~~~~~~i--l~~-~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~v~~~~~~~~~~~ 233 (325)
-+.|||+|+||..++...+.++ -.. ++.+.+. .+. .+ ++|-.+ -..+
T Consensus 283 ~~nDGA~a~~lmSe~~a~~lGL~~~PlA~i~~~~~---------------~G~-----------dP~~~mg~G---P~~A 333 (447)
T TIGR01930 283 PLNDGAAALLLMSEEKAKELGLNKTPLARIVSFAV---------------AGV-----------DPVEIMGLG---PVPA 333 (447)
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEE---------------ECC-----------CHHHHHCCC---CHHH
T ss_conf 21235642566507999980889942689941033---------------305-----------748861677---5889
Q ss_pred HHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCC---------------C--CHHHHHHHHH--HCCCCC---CCHHH
Q ss_conf 898899740120012246305654138999999719---------------7--8657002185--409330---00599
Q gi|254780489|r 234 AKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIG---------------L--SKRIMVNSLK--DFGNSS---SASIP 291 (325)
Q Consensus 234 i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lg---------------i--~~~~~~~~l~--~~GN~~---sAsi~ 291 (325)
++++|+|+||+.+|||+|=+|-+=....-.+.+.|+ + +.+|+=.+-- =+||=- .|=+.
T Consensus 334 ~~~aL~kaGL~~~diDl~E~NEAFAaqvL~~~~~L~~~~~~~~~LG~~~a~~~~~~~k~NvnGGAIAlGHPlGasGARi~ 413 (447)
T TIGR01930 334 IPKALKKAGLSISDIDLFEINEAFAAQVLASIKELGLDDYIRQALGRDTALLDIDLEKVNVNGGAIALGHPLGASGARIV 413 (447)
T ss_pred HHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEECCCCCCCCCCCCCHHHCCCCCCCHHHHHH
T ss_conf 99999984987335031013678999999999971784688863041110025861241766532111630023188999
Q ss_pred HHHHHHHHHC--CCCCCCEEEEEEECCCC
Q ss_conf 9999999806--78999899999861551
Q gi|254780489|r 292 LSLSLENQRK--PFQKGEKILTISCRRGN 318 (325)
Q Consensus 292 ~~L~~~~~~g--~i~~Gd~vll~~~G~G~ 318 (325)
+.|-+.+++. ..+-|=-=|+++.|.|.
T Consensus 414 ~tL~~~L~~~~~g~~~G~at~C~GGGqG~ 442 (447)
T TIGR01930 414 TTLLHELKRRKKGKRYGLATLCVGGGQGA 442 (447)
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHCE
T ss_conf 99999998514895301666444550000
No 130
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=96.10 E-value=0.024 Score=35.26 Aligned_cols=70 Identities=13% Similarity=0.124 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHH--HHHHH--HHHCCCCCCCH---HHHHHHHHHHH
Q ss_conf 3678988997401200122463056541389999997197865--70021--85409330005---99999999980
Q gi|254780489|r 231 AQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKR--IMVNS--LKDFGNSSSAS---IPLSLSLENQR 300 (325)
Q Consensus 231 ~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~--~~~~~--l~~~GN~~sAs---i~~~L~~~~~~ 300 (325)
...++++|+++|++++|||.|=+|.+=....-.+.+.||++.| |+-.+ .=-+||=-.|| +.+.|-+.+++
T Consensus 299 ~~A~~k~L~~agl~~~Did~~EinEAFA~q~l~~~~~lg~~~d~~kvN~~GGaiAlGHP~GAsGarl~~~l~~~L~~ 375 (400)
T PRK13359 299 APATQKLLARLGMTLDQFDVIELNEAFASQGLAVLRMLGVADDDARVNPNGGAIALGHPLGASGARLVTTALYQLHR 375 (400)
T ss_pred HHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 99999999976998456877786046688899999981999877748988668874888022479999999999998
No 131
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=96.09 E-value=0.029 Score=34.64 Aligned_cols=11 Identities=9% Similarity=0.060 Sum_probs=4.6
Q ss_pred HHHHHHCCCCC
Q ss_conf 99864301322
Q gi|254780489|r 63 DIALRNANIKK 73 (325)
Q Consensus 63 ~~aL~~a~~~~ 73 (325)
++..++.|+.-
T Consensus 42 ~~i~~~tgI~~ 52 (361)
T cd00831 42 KRLCAKTGIET 52 (361)
T ss_pred HHHHHCCCCCE
T ss_conf 99997269861
No 132
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=96.05 E-value=0.016 Score=36.29 Aligned_cols=70 Identities=13% Similarity=0.181 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHH--HHHCCCCCCCH---HHHHHHHHHHH
Q ss_conf 367898899740120012246305654138999999719786570021--85409330005---99999999980
Q gi|254780489|r 231 AQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNS--LKDFGNSSSAS---IPLSLSLENQR 300 (325)
Q Consensus 231 ~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~--l~~~GN~~sAs---i~~~L~~~~~~ 300 (325)
...++++|+++|++++|||.|=.|-+-....-.+.+.|+||++|+-.+ .--+||=-.|| +...|.+.+++
T Consensus 298 v~A~~k~l~~agl~~~Did~~EinEAFA~~~l~~~~~l~i~~~~vN~~GGaiA~GHP~GASGarl~~~l~~~L~~ 372 (397)
T PRK06954 298 VGAIRKLFEKNGWRAAEVDLYEINEAFAVVTMAAMKEHGLPHEKVNVNGGACALGHPIGASGARILVTLIGALRK 372 (397)
T ss_pred HHHHHHHHHHCCCCHHHCCEEEEHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 999999999849996656523540577888999999809994647888638875888220089999999999998
No 133
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA; InterPro: IPR004432 Members of this entry represent PfaA, which is involved in omega-3 polyunsaturated fatty acid biosynthesis, for example PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is found together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologues of PfaA, also included in this entry, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis; an alternative to the more familiar iterated mechanism of chain extension and desaturation, and like PfaA the more distant homologues are likewise found near genes for homologues of PfaB, PfaC, and/or PfaD..
Probab=96.05 E-value=0.007 Score=38.71 Aligned_cols=171 Identities=20% Similarity=0.325 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHCCCCCCCCCEEEEE--EE---EECCCCCCC-----CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 99999999864301322234425884--31---002368874-----322112100238633342101231012567657
Q gi|254780489|r 57 IAIQAGDIALRNANIKKDSISLTLLA--TS---TPDHLLPPS-----SPLITHRLGLMQSGAIDLTGACAGFLYALVMAD 126 (325)
Q Consensus 57 la~~Aa~~aL~~a~~~~~dId~ii~~--s~---t~d~~~P~~-----a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~ 126 (325)
|-.--.++.|+.+|++-+|=.+||-= -. +-+.-+|+. +.+|++|.-+-+.-|. +..+|+|.|.||++|-
T Consensus 141 LQyPVL~KV~K~SG~~d~D~~~lI~KF~~~Yi~WEENSFPG~LGNVIsGRIANRFDlGG~NCV-VDAACAGSLAA~~~Al 219 (2773)
T TIGR02813 141 LQYPVLKKVFKASGVEDEDSEMLIKKFQDQYIHWEENSFPGSLGNVISGRIANRFDLGGMNCV-VDAACAGSLAALRLAL 219 (2773)
T ss_pred CCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHHCCCCCCHH-HHHHHHHHHHHHHHHH
T ss_conf 033368888741588764689999987621344414578976433010101100015884256-6664366799999999
Q ss_pred HHHHCCCCEEEE---EEECC-------CCCC--------CCCCCC-CCCCCCCCCEEEEEECCCCCCCCC--CC----EE
Q ss_conf 887438850588---62012-------2444--------462224-434325442001122057654445--31----13
Q gi|254780489|r 127 SYINSHQKPVLI---IAANL-------LSRR--------INLEDK-DTAIIFGDAAGAVVLAPSPLKDKS--GI----LG 181 (325)
Q Consensus 127 ~~i~~g~~~vLV---v~~e~-------~S~~--------~d~~d~-~~~~lfGDgA~A~il~~~~~~~~~--~i----l~ 181 (325)
.-+--|+..++| ||+|. +|+. +.|-|- +-.++.|.|-|=+-|-|=+..|+. +| .+
T Consensus 220 s~L~E~RSe~MI~GGVC~DNSP~MYMSFSKTPAFTT~E~I~PFD~DSKGMMIGEGIGM~AlKRLeDAERDGD~iYaV~KG 299 (2773)
T TIGR02813 220 SELLEGRSEMMITGGVCTDNSPFMYMSFSKTPAFTTNEDIQPFDIDSKGMMIGEGIGMVALKRLEDAERDGDRIYAVIKG 299 (2773)
T ss_pred HHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHCCCCCEEEEEEEC
T ss_conf 86302532145627532488873020236787656788534331456754431655556533211010588778998731
Q ss_pred EEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCC
Q ss_conf 5532136776527830698667654455655232245145434320100367898899740120012246305654
Q gi|254780489|r 182 IELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFIPHQAN 257 (325)
Q Consensus 182 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i~Hq~~ 257 (325)
.-..|||.+.- ++-| ..+| -.+..+++.+++|+.|..+-.+=-|=-+
T Consensus 300 vGaSSDGkFKS-IYAP------------------RP~G----------QAKAL~RAYdDAGF~P~~~GliEAHGTG 346 (2773)
T TIGR02813 300 VGASSDGKFKS-IYAP------------------RPEG----------QAKALKRAYDDAGFAPHTVGLIEAHGTG 346 (2773)
T ss_pred CCCCCCCCEEE-EECC------------------CCCH----------HHHHHHHHHHHCCCCCCCEEEEECCCCC
T ss_conf 01376873223-2178------------------9844----------6899875464327997511006216777
No 134
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=96.05 E-value=0.025 Score=35.04 Aligned_cols=69 Identities=17% Similarity=0.235 Sum_probs=47.4
Q ss_pred HHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHH--HHHCCCCCCCH---HHHHHHHHHHH
Q ss_conf 67898899740120012246305654138999999719786570021--85409330005---99999999980
Q gi|254780489|r 232 QSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNS--LKDFGNSSSAS---IPLSLSLENQR 300 (325)
Q Consensus 232 ~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~--l~~~GN~~sAs---i~~~L~~~~~~ 300 (325)
..++++|+++|++++|||.+=+|-+=....-...+.||++++++-.+ +--+||=..|| +.+.|.+.+++
T Consensus 296 ~A~~~al~~agl~~~Did~~EinEAFA~~~l~~~~~lg~~~~~vN~~GGaia~GHP~GATGar~v~~l~~~L~~ 369 (394)
T PRK06445 296 PASRKALEKAGLKVKDIDLWEINEAFAVVVLYAIKELGIDPERVNIRGGAIAIGHPLGATGARIIGTLARQLQI 369 (394)
T ss_pred HHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 99999999739986678866760377888999999809887765898538872988021389999999999998
No 135
>PRK07491 consensus
Probab=96.04 E-value=0.011 Score=37.44 Aligned_cols=69 Identities=20% Similarity=0.242 Sum_probs=47.6
Q ss_pred HHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHH--HHHCCCCCCCH---HHHHHHHHHHH
Q ss_conf 67898899740120012246305654138999999719786570021--85409330005---99999999980
Q gi|254780489|r 232 QSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNS--LKDFGNSSSAS---IPLSLSLENQR 300 (325)
Q Consensus 232 ~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~--l~~~GN~~sAs---i~~~L~~~~~~ 300 (325)
..++++|+++|++++|||.|=+|-+-....-.+.+.||++++|+-.+ .--+||=-.|| +...|.+.+++
T Consensus 294 ~A~~k~L~~agl~~~Did~~EinEAFA~q~l~~~~~lg~d~~kvN~~GGaiA~GHP~GaTGarl~~~l~~~L~~ 367 (392)
T PRK07491 294 PASRKALEKAGWSVGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARVLNTLLFEMQR 367 (392)
T ss_pred HHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 99999999769985568877750567888999999839978886898548873888020089999999999998
No 136
>PRK08041 consensus
Probab=96.02 E-value=0.026 Score=34.98 Aligned_cols=70 Identities=19% Similarity=0.187 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHH--HHHCCCCCCCH---HHHHHHHHHHH
Q ss_conf 367898899740120012246305654138999999719786570021--85409330005---99999999980
Q gi|254780489|r 231 AQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNS--LKDFGNSSSAS---IPLSLSLENQR 300 (325)
Q Consensus 231 ~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~--l~~~GN~~sAs---i~~~L~~~~~~ 300 (325)
...++++|+++|++++|||.|=+|-+=....-.+.+.|+++++|+-.+ .--+||=-.|| +.+.|-+.+++
T Consensus 293 v~A~~k~L~~agl~~~Did~~EinEAFA~q~l~~~~~l~~d~~~vN~~GGaiA~GHP~GATGarl~~~l~~~L~~ 367 (391)
T PRK08041 293 VYATRRCLERVGWQLADVDLIEANEAFAAQALSVGKMLEWDERRVNVNGGAIALGHPIGASGCRILVSLVHEMVK 367 (391)
T ss_pred HHHHHHHHHHCCCCHHHCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 999999999859985448678860477999999999738983638988528874888121589999999999998
No 137
>PRK05790 acetyl-CoA acetyltransferase; Provisional
Probab=95.97 E-value=0.015 Score=36.62 Aligned_cols=69 Identities=20% Similarity=0.229 Sum_probs=48.1
Q ss_pred HHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHH--HHHCCCCCCCH---HHHHHHHHHHH
Q ss_conf 67898899740120012246305654138999999719786570021--85409330005---99999999980
Q gi|254780489|r 232 QSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNS--LKDFGNSSSAS---IPLSLSLENQR 300 (325)
Q Consensus 232 ~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~--l~~~GN~~sAs---i~~~L~~~~~~ 300 (325)
..++++|+++|++++|||.|=+|-+-....-.+.+.|+++++|+-.+ .--+||=-.|| +...|.+.+++
T Consensus 295 ~A~~~~l~~agl~~~Did~~Ei~EAFA~~~l~~~~~l~~~~~~vN~~GGaiA~GHP~GATG~r~v~~l~~~L~~ 368 (393)
T PRK05790 295 PAIRKALEKAGWTLADLDLIEINEAFAAQALAVEKELGLDPEKVNVNGGAIALGHPIGASGARILVTLLHEMKR 368 (393)
T ss_pred HHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 99999999759980349778870145888999999829995773898548861988022589999999999987
No 138
>PRK07800 consensus
Probab=95.96 E-value=0.014 Score=36.68 Aligned_cols=83 Identities=19% Similarity=0.269 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHH--HHHCCCCCCCH---HHHHHHHHHHHCCCCC
Q ss_conf 367898899740120012246305654138999999719786570021--85409330005---9999999998067899
Q gi|254780489|r 231 AQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNS--LKDFGNSSSAS---IPLSLSLENQRKPFQK 305 (325)
Q Consensus 231 ~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~--l~~~GN~~sAs---i~~~L~~~~~~g~i~~ 305 (325)
...++++|+++|++++|||+|=+|-+-..---...+.|||+++|+-.+ .--+||=-.|| +.+.|.+.+++ +.
T Consensus 294 ~~A~~~al~~agl~~~Did~~EinEAFA~~~l~~~~~lgi~~~~vN~~GGaiA~GHP~GATG~rl~~~l~~~L~~---~~ 370 (393)
T PRK07800 294 ANAIKKALAREGISVDDLDLVEINEAFAAVALASTRELGVDPEKVNVNGGAIALGHPIGMSGARIVLHLALELKR---RG 370 (393)
T ss_pred HHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---CC
T ss_conf 999999999849985547767760356888999999829988881898418873988020289999999999998---09
Q ss_pred CCEEEEEEECCC
Q ss_conf 989999986155
Q gi|254780489|r 306 GEKILTISCRRG 317 (325)
Q Consensus 306 Gd~vll~~~G~G 317 (325)
| +..+++.-.|
T Consensus 371 ~-~~g~~s~c~g 381 (393)
T PRK07800 371 G-GVGAAALCGG 381 (393)
T ss_pred C-CEEEEEECCC
T ss_conf 9-8899996343
No 139
>PRK07025 consensus
Probab=95.86 E-value=0.0092 Score=37.92 Aligned_cols=70 Identities=17% Similarity=0.208 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHH--HHHCCCCCCCH---HHHHHHHHHHH
Q ss_conf 367898899740120012246305654138999999719786570021--85409330005---99999999980
Q gi|254780489|r 231 AQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNS--LKDFGNSSSAS---IPLSLSLENQR 300 (325)
Q Consensus 231 ~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~--l~~~GN~~sAs---i~~~L~~~~~~ 300 (325)
...++++|+++|++++|||.|=+|-+-....-.+.+.||++.+|+-.+ .--+||=-.|| +.+.|-+.+++
T Consensus 294 v~A~~k~l~~agl~~~Did~~EinEAFA~~~l~~~~~lg~d~~~vN~~GGaiA~GHP~GATGar~~~~l~~~L~~ 368 (393)
T PRK07025 294 VPASRRCLERAGWTVGDLDLMEINEAFAAQALAVHKQMGWDTSKVNVNGGAIAIGHPIGASGCRILVTLLHEMQK 368 (393)
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 999999999859983346602013677888999999848994657988548872898031289999999999987
No 140
>PRK08234 consensus
Probab=95.76 E-value=0.014 Score=36.72 Aligned_cols=70 Identities=21% Similarity=0.267 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHH--HHHCCCCCCCH---HHHHHHHHHHH
Q ss_conf 367898899740120012246305654138999999719786570021--85409330005---99999999980
Q gi|254780489|r 231 AQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNS--LKDFGNSSSAS---IPLSLSLENQR 300 (325)
Q Consensus 231 ~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~--l~~~GN~~sAs---i~~~L~~~~~~ 300 (325)
...++++|+++|++++|||.|=+|-+-....-.+.+.|+++++|+-.+ .--+||=-.|| +.+.|.+.+++
T Consensus 300 ~~A~~~~L~ragl~~~Did~~EinEAFA~~~l~~~~~l~i~~~kvN~~GGaiAlGHP~GaTGarl~~~l~~~L~~ 374 (400)
T PRK08234 300 VFATRKALRRAGLTVDDIDLVELNEAFAAQALACIRELGLDRAKVNVNGGAIALGHPLGASGARILTTLIYEMRR 374 (400)
T ss_pred HHHHHHHHHHCCCCHHHCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 999999998749984228756760777888999999848978877898548874888032189999999999998
No 141
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=95.73 E-value=0.024 Score=35.18 Aligned_cols=75 Identities=13% Similarity=0.116 Sum_probs=49.8
Q ss_pred HHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHH--HHHCCCCCCCH---HHHHHHHHHHHCCCCCC
Q ss_conf 67898899740120012246305654138999999719786570021--85409330005---99999999980678999
Q gi|254780489|r 232 QSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNS--LKDFGNSSSAS---IPLSLSLENQRKPFQKG 306 (325)
Q Consensus 232 ~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~--l~~~GN~~sAs---i~~~L~~~~~~g~i~~G 306 (325)
..++++|+++|++++|||.|=+|-+=...--.+.+.|+|+.+|+-.+ .--+||=-.|| +...|.+.+++...+-|
T Consensus 289 ~A~~~~L~ragl~~~did~~EinEAFA~~~l~~~~~l~id~~kvN~~GGaiA~GHP~GaTGar~~~~l~~~L~~~~~~~g 368 (388)
T PRK06366 289 PATRKLLEKQNKSIDYYDLVEHNEAFSIASIIVRDQLKIDNERFNVNGGAVAIGHPIGNSGSRIIVTLINALKTRHMKTG 368 (388)
T ss_pred HHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEE
T ss_conf 99999999859985551378860888999999998629991108888258874786210389999999999998199989
No 142
>pfam08392 FAE1_CUT1_RppA FAE1/Type III polyketide synthase-like protein. The members of this family are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region featured in this family contains the active site residues, as well as motifs involved in substrate binding.
Probab=95.70 E-value=0.057 Score=32.74 Aligned_cols=83 Identities=13% Similarity=0.216 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEECC----CCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 03678988997401200122463056----54138999999719786570021854093300059999999998067899
Q gi|254780489|r 230 MAQSAKQSLRKSDLQPQDINRFIPHQ----ANSRIIQKVCEKIGLSKRIMVNSLKDFGNSSSASIPLSLSLENQRKPFQK 305 (325)
Q Consensus 230 ~~~~i~~~l~~~gl~~~did~~i~Hq----~~~~~~~~~~~~lgi~~~~~~~~l~~~GN~~sAsi~~~L~~~~~~g~i~~ 305 (325)
+-.+++++|+++|++|.|||.+|..- +...+-..+..+.+...+---.+| |-+|.+.-.++.+.+.+-=+..|
T Consensus 87 ~f~avd~Lf~ktgv~P~dIdiLVvNcSlf~PtPSLsamivNrykmR~di~s~nL---sGMGCSAglIsIdLAk~lL~~~~ 163 (290)
T pfam08392 87 MFGAVDELFAKTGVRPRDIGILVVNCSLFNPTPSLSAMIVNRYKMRGDIKSYNL---SGMGCSAGLISIDLAKDLLQVHP 163 (290)
T ss_pred HHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEECC---CCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 999999999973998768999999677888885289999886068643006336---67651134757999999998489
Q ss_pred CCEEEEEEEC
Q ss_conf 9899999861
Q gi|254780489|r 306 GEKILTISCR 315 (325)
Q Consensus 306 Gd~vll~~~G 315 (325)
|...|+++.+
T Consensus 164 ns~ALVvSTE 173 (290)
T pfam08392 164 NTYALVVSTE 173 (290)
T ss_pred CCEEEEEEEE
T ss_conf 9659999853
No 143
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=95.63 E-value=0.046 Score=33.33 Aligned_cols=70 Identities=19% Similarity=0.269 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHH--HHHCCCCCCCH---HHHHHHHHHHH
Q ss_conf 367898899740120012246305654138999999719786570021--85409330005---99999999980
Q gi|254780489|r 231 AQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNS--LKDFGNSSSAS---IPLSLSLENQR 300 (325)
Q Consensus 231 ~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~--l~~~GN~~sAs---i~~~L~~~~~~ 300 (325)
...++++|+++|++++|||.|=+|.+-....-.+.+.|++|.+|+-.+ ---+||=-.|| +.+.|.+.+++
T Consensus 303 v~A~~k~L~~agl~~~did~~EinEAFA~q~la~~~~l~id~~kvN~~GGaiAlGHP~GaSGariv~~l~~~L~~ 377 (402)
T PRK08242 303 VPATRKALAKAGLTISDIDLFELNEAFASVVLRFMKALGIPHDKVNVNGGAIAMGHPLGATGAMILGTVLDELER 377 (402)
T ss_pred HHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 999999999869984568878860666888999999849988884998667874888035589999999999987
No 144
>pfam02803 Thiolase_C Thiolase, C-terminal domain. Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase.
Probab=95.61 E-value=0.037 Score=33.98 Aligned_cols=70 Identities=24% Similarity=0.276 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHH--HHCCCCCCCH---HHHHHHHHHHH
Q ss_conf 3678988997401200122463056541389999997197865700218--5409330005---99999999980
Q gi|254780489|r 231 AQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNSL--KDFGNSSSAS---IPLSLSLENQR 300 (325)
Q Consensus 231 ~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~l--~~~GN~~sAs---i~~~L~~~~~~ 300 (325)
...++++|+++|++++|||+|=+|.+-....-.+.+.|++|.||+-.+- =-+||=-.|| +...|.+.+++
T Consensus 25 ~~A~~~lL~r~gl~~~Did~~EinEAFA~~~l~~~~~l~id~ekvN~~GGaiAlGHP~GaSGarlv~~l~~~L~~ 99 (123)
T pfam02803 25 AYAIPKALKKAGLTVNDIDLFEINEAFAAQALAVAKDLGIDPEKVNVNGGAIALGHPLGASGARILVTLLHELKR 99 (123)
T ss_pred HHHHHHHHHHCCCCHHHCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 999999999829985546645641456777899999719892014898873442788466248999999999998
No 145
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=95.61 E-value=0.024 Score=35.21 Aligned_cols=70 Identities=21% Similarity=0.241 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCH---HHHHHH--HHHCCCCCCCH---HHHHHHHHHHH
Q ss_conf 367898899740120012246305654138999999719786---570021--85409330005---99999999980
Q gi|254780489|r 231 AQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSK---RIMVNS--LKDFGNSSSAS---IPLSLSLENQR 300 (325)
Q Consensus 231 ~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~---~~~~~~--l~~~GN~~sAs---i~~~L~~~~~~ 300 (325)
...++++|+++|++++|||.|=+|-+=....-.+.+.|+|++ ||+-.+ .--+||=-.|| +.+.|.+.+++
T Consensus 301 v~A~~~~L~~agl~~~Did~~EinEAFA~q~la~~~~l~i~~~d~~kvN~~GGaiAlGHP~GaTGarl~~~l~~~L~~ 378 (404)
T PRK06205 301 VPATEKALARAGLTLDDIDLIELNEAFAAQVLAVLKEWGFSDADEERLNVNGSGISLGHPVGATGGRILATLLRELQR 378 (404)
T ss_pred HHHHHHHHHHCCCCHHHCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 999999999859983107744631477888999999839898873408988548874888120189999999999997
No 146
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=95.55 E-value=0.024 Score=35.19 Aligned_cols=70 Identities=16% Similarity=0.186 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHH--HHHCCCCCCCH---HHHHHHHHHHH
Q ss_conf 367898899740120012246305654138999999719786570021--85409330005---99999999980
Q gi|254780489|r 231 AQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNS--LKDFGNSSSAS---IPLSLSLENQR 300 (325)
Q Consensus 231 ~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~--l~~~GN~~sAs---i~~~L~~~~~~ 300 (325)
...++++|+++|++++|||.|=+|.+-....-.+.+.|+++++|+-.+ .=-+||=-.|| +.+.|.+.+++
T Consensus 294 ~~A~~k~L~~agl~~~Did~~EinEAFA~q~l~~~~~l~id~~kvN~~GGaiAlGHP~GATGarl~~~l~~~L~~ 368 (392)
T PRK05656 294 VSATRRCLDKAGWSLAELDLIEANEAFAAQSLAVGKELGWDAAKVNVNGGAIALGHPIGASGCRVLVTLLHEMIR 368 (392)
T ss_pred HHHHHHHHHHCCCCHHCCCEEEECCHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 999999999849983108777852167899999999848985766888548871888031379999999999987
No 147
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=95.52 E-value=0.031 Score=34.51 Aligned_cols=70 Identities=19% Similarity=0.235 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHH--HHHHH--HHHCCCCCCCH---HHHHHHHHHHH
Q ss_conf 3678988997401200122463056541389999997197865--70021--85409330005---99999999980
Q gi|254780489|r 231 AQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKR--IMVNS--LKDFGNSSSAS---IPLSLSLENQR 300 (325)
Q Consensus 231 ~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~--~~~~~--l~~~GN~~sAs---i~~~L~~~~~~ 300 (325)
...++++|+++|++++|||.|=+|-+-..-.-...+.||++.+ |+-.+ .--+||=-.|| +.+.|.+.+++
T Consensus 299 v~A~~~~L~~agl~~~Did~~EinEAFA~~~l~~~~~lgl~~d~~kvN~~GGaiA~GHP~GATGarl~~~l~~~L~~ 375 (401)
T PRK08131 299 VEAIKKALARAGLTLDDMDIIEINEAFASQVLSCLKGLGVDFDDPRVNPNGGAIAVGHPLGASGARLALTAARELQR 375 (401)
T ss_pred HHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 99999999975998123877785026688899999980999887808988668873888020089999999999987
No 148
>pfam02803 Thiolase_C Thiolase, C-terminal domain. Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase.
Probab=95.49 E-value=0.032 Score=34.38 Aligned_cols=92 Identities=15% Similarity=0.100 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCC--------CCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 9999999864301322234425884310023688743221121002386--------33342101231012567657887
Q gi|254780489|r 58 AIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLMQS--------GAIDLTGACAGFLYALVMADSYI 129 (325)
Q Consensus 58 a~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~~~--------~~~di~~~C~g~l~aL~~A~~~i 129 (325)
.+.|++++|++++++++|||++-..-.. -+.+-...++||++.. .++.==.||+|.-..+.++..+-
T Consensus 24 p~~A~~~lL~r~gl~~~Did~~EinEAF-----A~~~l~~~~~l~id~ekvN~~GGaiAlGHP~GaSGarlv~~l~~~L~ 98 (123)
T pfam02803 24 PAYAIPKALKKAGLTVNDIDLFEINEAF-----AAQALAVAKDLGIDPEKVNVNGGAIALGHPLGASGARILVTLLHELK 98 (123)
T ss_pred HHHHHHHHHHHCCCCHHHCCEEEECHHH-----HHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHH
T ss_conf 9999999999829985546645641456-----77789999971989201489887344278846624899999999999
Q ss_pred HCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf 43885058862012244446222443432544200112205
Q gi|254780489|r 130 NSHQKPVLIIAANLLSRRINLEDKDTAIIFGDAAGAVVLAP 170 (325)
Q Consensus 130 ~~g~~~vLVv~~e~~S~~~d~~d~~~~~lfGDgA~A~il~~ 170 (325)
+.+.++.++..|- -|..+.|+++++
T Consensus 99 ~~~~~~G~as~C~----------------gGG~g~A~llER 123 (123)
T pfam02803 99 RRGGKYGLATLCI----------------GGGQGVAMIIER 123 (123)
T ss_pred HHCCCEEEEEEEC----------------CCCEEEEEEEEC
T ss_conf 8399999999703----------------556088999979
No 149
>PRK09051 beta-ketothiolase; Provisional
Probab=95.49 E-value=0.021 Score=35.59 Aligned_cols=70 Identities=19% Similarity=0.256 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHH--HHHCCCCCCCH---HHHHHHHHHHH
Q ss_conf 367898899740120012246305654138999999719786570021--85409330005---99999999980
Q gi|254780489|r 231 AQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNS--LKDFGNSSSAS---IPLSLSLENQR 300 (325)
Q Consensus 231 ~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~--l~~~GN~~sAs---i~~~L~~~~~~ 300 (325)
...++++|+++|++++|||.|=+|.+=....-.+.+.|+++++|+-.+ .--+||=-.|| +.+.|.+.+++
T Consensus 295 ~~A~~~~L~ragl~~~Did~~EinEAFA~q~l~~~~~l~~d~~kvN~~GGaiAlGHP~GaTGar~~~~l~~~L~~ 369 (394)
T PRK09051 295 VPATQKALERAGLTVDDLDVIEANEAFAAQACAVTRELGLDPAKVNPNGSGISLGHPVGATGAIITVKALYELQR 369 (394)
T ss_pred HHHHHHHHHHCCCCHHHCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 999999999839987779888851465999999998709987874998658863988023489999999999987
No 150
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=95.46 E-value=0.034 Score=34.23 Aligned_cols=70 Identities=16% Similarity=0.160 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHH--HHHHH--HHHCCCCCCCH---HHHHHHHHHHH
Q ss_conf 3678988997401200122463056541389999997197865--70021--85409330005---99999999980
Q gi|254780489|r 231 AQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKR--IMVNS--LKDFGNSSSAS---IPLSLSLENQR 300 (325)
Q Consensus 231 ~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~--~~~~~--l~~~GN~~sAs---i~~~L~~~~~~ 300 (325)
...++++|+++|++++|||.|=+|.+=....-.+.+.||+++| |+-.+ .=-+||=-.|| +...|.+.+++
T Consensus 300 ~~A~~~~L~~agl~~~DiD~~EinEAFA~q~l~~~~~lg~~~d~~kvN~~GGaiAlGHP~GATGari~~~l~~~L~~ 376 (401)
T PRK09050 300 APATRKLLARLGLTIDQFDVIELNEAFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQLER 376 (401)
T ss_pred HHHHHHHHHHCCCCHHHCCEEEECHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 99999999985998544878997024377799999984999885507999678875888022289999999999998
No 151
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=95.44 E-value=0.023 Score=35.33 Aligned_cols=114 Identities=19% Similarity=0.240 Sum_probs=67.7
Q ss_pred CCCCCEEEEEECCCCCCCCCCCEEE-EEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHH
Q ss_conf 2544200112205765444531135-532136776527830698667654455655232245145434320100367898
Q gi|254780489|r 158 IFGDAAGAVVLAPSPLKDKSGILGI-ELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQ 236 (325)
Q Consensus 158 lfGDgA~A~il~~~~~~~~~~il~~-~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~ 236 (325)
...|||+|+||..++...+.++-.. ++.+.+.. ... +..+-.+ -...+++
T Consensus 260 ~~~DGAAavll~se~~a~~~gl~Plari~~~~~~----------g~d----------------P~~m~~~---Pv~A~~~ 310 (405)
T PRK07851 260 PLNDGAAAVVIMSDTKARELGLTPLARIVSTGVS----------GLS----------------PEIMGLG---PIEASKQ 310 (405)
T ss_pred CCCCHHHHHHHCCHHHHHHCCCCCEEEEEECCCC----------CCC----------------HHHHCCC---HHHHHHH
T ss_conf 6543469988727999997799815999954005----------648----------------7884618---8999999
Q ss_pred HHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHH--HHHCCCCCCCH---HHHHHHHHHHH
Q ss_conf 899740120012246305654138999999719786570021--85409330005---99999999980
Q gi|254780489|r 237 SLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNS--LKDFGNSSSAS---IPLSLSLENQR 300 (325)
Q Consensus 237 ~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~--l~~~GN~~sAs---i~~~L~~~~~~ 300 (325)
+|+++|++++|||.|=+|-+=....-.+.+.|||+++|+-.+ .--+||=-.|| +...|-+.+++
T Consensus 311 ~L~~agl~~~Did~~EinEAFA~q~l~~~~~lgid~~kvNv~GGaiAlGHP~GAsGarl~~~l~~~L~~ 379 (405)
T PRK07851 311 ALARAGMTIDDIDLVEINEAFAVQVLGSARELGIDEDKLNVSGGAIALGHPFGMTGARITTTLLNNLQT 379 (405)
T ss_pred HHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 999769980248755640667888999999848988881998558873887031179999999999998
No 152
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=95.22 E-value=0.036 Score=34.07 Aligned_cols=70 Identities=19% Similarity=0.222 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCC---CHHHHHHH--HHHCCCCCCCH---HHHHHHHHHHH
Q ss_conf 3678988997401200122463056541389999997197---86570021--85409330005---99999999980
Q gi|254780489|r 231 AQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGL---SKRIMVNS--LKDFGNSSSAS---IPLSLSLENQR 300 (325)
Q Consensus 231 ~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi---~~~~~~~~--l~~~GN~~sAs---i~~~L~~~~~~ 300 (325)
...++++|+++|++++|||.|=+|-+=....-.+.+.||+ +.+|+-.+ .--+||=-.|| +.+.|.+.+++
T Consensus 285 ~~A~~~~L~~agl~~~Did~~EinEAFA~q~l~~~~~lg~~~~~~~kvN~~GGaiA~GHP~GATGarl~~~l~~~L~~ 362 (387)
T PRK08947 285 VPATQKALKRAGLSIADIDVFELNEAFAAQSLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMER 362 (387)
T ss_pred HHHHHHHHHHCCCCHHHCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 999999999849986557842212566877999999859988983357899658873888110289999999999998
No 153
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=95.21 E-value=0.038 Score=33.88 Aligned_cols=70 Identities=17% Similarity=0.200 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHH--HHHCCCCCCCH---HHHHHHHHHHH
Q ss_conf 367898899740120012246305654138999999719786570021--85409330005---99999999980
Q gi|254780489|r 231 AQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNS--LKDFGNSSSAS---IPLSLSLENQR 300 (325)
Q Consensus 231 ~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~--l~~~GN~~sAs---i~~~L~~~~~~ 300 (325)
...++++|+++|++++|||.|=+|-+-....-.+.+.||++++|+-.+ .--+||=-.|| +.+.|.+.+++
T Consensus 283 ~~A~~~~l~~agl~~~Did~~EinEAFA~~~l~~~~~lg~~~~kvN~~GGaia~GHP~GATG~r~~~~l~~~L~~ 357 (382)
T PRK07801 283 IPATRYALDKTGLTIDDIDVVEINEAFAPVVMAWLKETGADPEKVNPNGGAIALGHPLGATGAKLMTTLLHELER 357 (382)
T ss_pred HHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 999999999849981138855740366888999999828992435888439871988032799999999999987
No 154
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=95.15 E-value=0.056 Score=32.81 Aligned_cols=76 Identities=16% Similarity=0.145 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHH--HHCCCCCCCH---HHHHHHHHHHHCCCCC
Q ss_conf 3678988997401200122463056541389999997197865700218--5409330005---9999999998067899
Q gi|254780489|r 231 AQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNSL--KDFGNSSSAS---IPLSLSLENQRKPFQK 305 (325)
Q Consensus 231 ~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~l--~~~GN~~sAs---i~~~L~~~~~~g~i~~ 305 (325)
...++++|+++|++.+|||.|=+|.+-....-.+.+.|+++.+|+-.+- =-+||=-.|| +.+.|.+.+++...+-
T Consensus 293 ~~A~~k~L~~agl~~~Did~~EinEAFA~q~l~~~~~l~~d~~kvN~~GGaiAlGHP~GaTGarl~~~l~~~L~~~~~~~ 372 (392)
T PRK06633 293 VPASQKALSKAGWSVNDLEVIEVNEAFAAQSIYVNREMKWDMEKVNINGGAIAIGHPIGASGGRVLITLIHNLRRAKAKK 372 (392)
T ss_pred HHHHHHHHHHCCCCHHHCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCE
T ss_conf 99999999984998310867886036688899999870997888689855887478811158999999999998719998
Q ss_pred C
Q ss_conf 9
Q gi|254780489|r 306 G 306 (325)
Q Consensus 306 G 306 (325)
|
T Consensus 373 G 373 (392)
T PRK06633 373 G 373 (392)
T ss_pred E
T ss_conf 9
No 155
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=95.10 E-value=0.064 Score=32.41 Aligned_cols=13 Identities=46% Similarity=0.567 Sum_probs=5.4
Q ss_pred HHHHHHCCCCHHH
Q ss_conf 9999971978657
Q gi|254780489|r 262 QKVCEKIGLSKRI 274 (325)
Q Consensus 262 ~~~~~~lgi~~~~ 274 (325)
+.+.++.|+.++.
T Consensus 233 ~~~L~~~gl~~~d 245 (326)
T PRK12879 233 KQVLEKAGLTKDD 245 (326)
T ss_pred HHHHHHCCCCHHH
T ss_conf 9999985999778
No 156
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=95.07 E-value=0.12 Score=30.70 Aligned_cols=55 Identities=18% Similarity=0.080 Sum_probs=20.9
Q ss_pred HHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC-CCCEEEEEEECCCCC
Q ss_conf 9999971978657002185409330005999999999806789-998999998615510
Q gi|254780489|r 262 QKVCEKIGLSKRIMVNSLKDFGNSSSASIPLSLSLENQRKPFQ-KGEKILTISCRRGND 319 (325)
Q Consensus 262 ~~~~~~lgi~~~~~~~~l~~~GN~~sAsi~~~L~~~~~~g~i~-~Gd~vll~~~G~G~s 319 (325)
+.+.++-|++.+.+-..+ -|-.+.-+.-.+.+.++.-.+. |-|+++..----|-|
T Consensus 279 ~~~L~~~gl~~~dId~~v---pHQAn~ri~~~v~~~l~~~g~~ip~ek~~~~v~~~GNT 334 (378)
T PRK06816 279 LELVDKRRLDPDAIDHFL---PHYSSEYFREKIVELLAKAGLMIPEEKWFTNLATVGNT 334 (378)
T ss_pred HHHHHHCCCCHHHCCEEE---CCCCHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCCH
T ss_conf 999998499989988881---26105999999999987535899866616014232707
No 157
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=94.87 E-value=0.069 Score=32.19 Aligned_cols=70 Identities=14% Similarity=0.175 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHH--HHCCCCCCCH---HHHHHHHHHHH
Q ss_conf 3678988997401200122463056541389999997197865700218--5409330005---99999999980
Q gi|254780489|r 231 AQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNSL--KDFGNSSSAS---IPLSLSLENQR 300 (325)
Q Consensus 231 ~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~l--~~~GN~~sAs---i~~~L~~~~~~ 300 (325)
...++.+|+++|++.+|||.|=+|.+=....-.+.+.|+|+.+|+-.+- =-+||=-.|| +.+.|.+.+++
T Consensus 293 v~A~~~~L~ragl~~~Did~~EinEAFA~q~l~~~~~l~id~~kvN~~GGaiAlGHP~GaSGarl~~~l~~~L~~ 367 (392)
T PRK07108 293 VFAVPKLLKQAGLKVDDIDLWELNEAFAVQVLYCRDTLGIPMDRLNVNGGAIAVGHPYGVSGARLTGHALIEGKR 367 (392)
T ss_pred HHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 999999999759973357734640577888999998829889992998667875888121189999999999997
No 158
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=94.82 E-value=0.04 Score=33.76 Aligned_cols=69 Identities=22% Similarity=0.222 Sum_probs=48.3
Q ss_pred HHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHH--HHHCCCCCCCH---HHHHHHHHHHH
Q ss_conf 67898899740120012246305654138999999719786570021--85409330005---99999999980
Q gi|254780489|r 232 QSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNS--LKDFGNSSSAS---IPLSLSLENQR 300 (325)
Q Consensus 232 ~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~--l~~~GN~~sAs---i~~~L~~~~~~ 300 (325)
..++++|+++|++++|||.+=+|-+-....-...+.||++++|+-.+ .--+||=-.|| +...|.+.+++
T Consensus 295 ~A~~~~l~~agl~~~Did~~Ei~EAFA~~~l~~~~~lg~~~~~vN~~GG~ia~GHP~GATG~r~v~~l~~~L~~ 368 (393)
T PRK08235 295 YAINALLEKTGKTIEDIDLFEINEAFAAVALASTEIAGIDPEKVNVNGGAVALGHPIGASGARIIVTLIYELKR 368 (393)
T ss_pred HHHHHHHHHCCCCHHHCCEEEECHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 99999999849983216732410488999999999719985765898538873888120189999999999998
No 159
>PRK06689 consensus
Probab=94.64 E-value=0.046 Score=33.36 Aligned_cols=87 Identities=22% Similarity=0.269 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHH--HHCCCCCCCH---HHHHHHHHHHHCCCCC
Q ss_conf 3678988997401200122463056541389999997197865700218--5409330005---9999999998067899
Q gi|254780489|r 231 AQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNSL--KDFGNSSSAS---IPLSLSLENQRKPFQK 305 (325)
Q Consensus 231 ~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~l--~~~GN~~sAs---i~~~L~~~~~~g~i~~ 305 (325)
...++++|+++|++.+|||.|=+|.+=....-.+.+.||+++||+-.+- =-+||=-.|| +...|.+.+++...+.
T Consensus 292 v~A~~k~L~ragl~~~Did~~EinEAFA~q~l~~~~~lgid~~kvN~~GGaiAlGHP~GaTGarl~~~l~~~L~~~~~~~ 371 (391)
T PRK06689 292 APAIRKGLEKVDWSLEDADLLEINEAFAAQYLAVEKELGLDREKVNVNGSGVGLGHPIGCTGARITVSLIHELKRRGLEK 371 (391)
T ss_pred HHHHHHHHHHCCCCHHHCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCE
T ss_conf 99999999985998645888996156688999999985897988899866887488812147999999999999809998
Q ss_pred CCEEEEEEECCC
Q ss_conf 989999986155
Q gi|254780489|r 306 GEKILTISCRRG 317 (325)
Q Consensus 306 Gd~vll~~~G~G 317 (325)
|=--++++.|.|
T Consensus 372 gl~t~C~ggG~G 383 (391)
T PRK06689 372 GIASLCVGGGIG 383 (391)
T ss_pred EEEEECCCCCHH
T ss_conf 999964302321
No 160
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=94.60 E-value=0.11 Score=30.97 Aligned_cols=76 Identities=20% Similarity=0.266 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHH--HHCCCCCCCH---HHHHHHHHHHHCCCCC
Q ss_conf 3678988997401200122463056541389999997197865700218--5409330005---9999999998067899
Q gi|254780489|r 231 AQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNSL--KDFGNSSSAS---IPLSLSLENQRKPFQK 305 (325)
Q Consensus 231 ~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~l--~~~GN~~sAs---i~~~L~~~~~~g~i~~ 305 (325)
...++++|+++|++++|||.|=+|.+-......+.+.|+++++|+-.+- =-+||=-.|| +...|.+.+++..-+-
T Consensus 318 v~Ai~~~L~r~gl~~~Did~~EiNEAFA~q~la~~~~l~ld~~kvNv~GGAiAlGHP~GASGari~~tL~~~L~~~~~~~ 397 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEINEAFAVVAEKFIRDLDLDRDKVNVNGGAIALGHPIGATGSILIGTVLDELERRGLKR 397 (417)
T ss_pred HHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCE
T ss_conf 99999999876997135777886067899999999970997988899867887388811558999999999998729999
Q ss_pred C
Q ss_conf 9
Q gi|254780489|r 306 G 306 (325)
Q Consensus 306 G 306 (325)
|
T Consensus 398 G 398 (417)
T PRK06025 398 G 398 (417)
T ss_pred E
T ss_conf 9
No 161
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=94.59 E-value=0.046 Score=33.34 Aligned_cols=69 Identities=22% Similarity=0.270 Sum_probs=49.2
Q ss_pred HHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHH--HHCCCCCCCH---HHHHHHHHHHH
Q ss_conf 678988997401200122463056541389999997197865700218--5409330005---99999999980
Q gi|254780489|r 232 QSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNSL--KDFGNSSSAS---IPLSLSLENQR 300 (325)
Q Consensus 232 ~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~l--~~~GN~~sAs---i~~~L~~~~~~ 300 (325)
..++++|+++|++.+|||.|=+|.+=....-.+.+.|+|+++|+-.+- =-+||=-.|| +.+.|.+.+++
T Consensus 286 ~A~~k~L~ragl~~~DiD~~EinEAFA~q~l~~~~~l~id~~kvN~~GGaiAlGHP~GatGarl~~tl~~~L~~ 359 (384)
T PRK07661 286 AAIPKALKLAGLELSDIGLFELNEAFASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKR 359 (384)
T ss_pred HHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 99999999869986677755650667888999999839988883998658874888034479999999999998
No 162
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=94.56 E-value=0.062 Score=32.49 Aligned_cols=15 Identities=20% Similarity=0.315 Sum_probs=6.8
Q ss_pred HHHHHHHHCCCCHHH
Q ss_conf 899999971978657
Q gi|254780489|r 260 IIQKVCEKIGLSKRI 274 (325)
Q Consensus 260 ~~~~~~~~lgi~~~~ 274 (325)
.++.+.++.|+.++.
T Consensus 225 ~i~~~L~~~gl~~~d 239 (319)
T PRK09352 225 VAREALEAAGLTPED 239 (319)
T ss_pred HHHHHHHHCCCCHHH
T ss_conf 999999874998323
No 163
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=94.48 E-value=0.13 Score=30.44 Aligned_cols=13 Identities=8% Similarity=0.199 Sum_probs=4.9
Q ss_pred HHHHHHHCCCCCC
Q ss_conf 9889974012001
Q gi|254780489|r 235 KQSLRKSDLQPQD 247 (325)
Q Consensus 235 ~~~l~~~gl~~~d 247 (325)
+.+.++.|+.++.
T Consensus 257 ~~~~~~lgi~~~k 269 (320)
T cd00830 257 EAVAKRLGLPEEK 269 (320)
T ss_pred HHHHHHHCCCHHH
T ss_conf 9999980969899
No 164
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=94.48 E-value=0.084 Score=31.63 Aligned_cols=16 Identities=0% Similarity=0.030 Sum_probs=6.9
Q ss_pred HHHHHHHHHCCCCCCC
Q ss_conf 7898899740120012
Q gi|254780489|r 233 SAKQSLRKSDLQPQDI 248 (325)
Q Consensus 233 ~i~~~l~~~gl~~~di 248 (325)
.++.+.++.++.++.+
T Consensus 258 ~~~~i~~~lgl~~~k~ 273 (327)
T CHL00203 258 ILEAVADRLSIPHSKM 273 (327)
T ss_pred HHHHHHHHHCCCHHHH
T ss_conf 9999999819797886
No 165
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=94.42 E-value=0.066 Score=32.34 Aligned_cols=76 Identities=14% Similarity=0.195 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHH--HHHCCCCCCCH---HHHHHHHHHHHCCCCC
Q ss_conf 367898899740120012246305654138999999719786570021--85409330005---9999999998067899
Q gi|254780489|r 231 AQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNS--LKDFGNSSSAS---IPLSLSLENQRKPFQK 305 (325)
Q Consensus 231 ~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~--l~~~GN~~sAs---i~~~L~~~~~~g~i~~ 305 (325)
...++++|+++||+++|||+|=+|.+=....-.+.+.|++|++|+-.+ .=-+||=-.|| +...|-+.+++...+-
T Consensus 300 v~A~~k~L~~agl~~~Did~~EinEAFA~~~l~~~~~l~id~~kvN~~GGaiAlGHP~GasGari~~tl~~~L~~~~~~~ 379 (399)
T PRK09052 300 IEAIPAALKQAGLKQDDLDWIELNEAFAAQSLAVIRDLGLDPSKVNPLGGAIALGHPLGATGAIRTATVVHGLRRTNLKY 379 (399)
T ss_pred HHHHHHHHHHCCCCHHHCCEEEEHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCE
T ss_conf 99999999983998667787886034388899999982997989699877887488703109999999999998709998
Q ss_pred C
Q ss_conf 9
Q gi|254780489|r 306 G 306 (325)
Q Consensus 306 G 306 (325)
|
T Consensus 380 G 380 (399)
T PRK09052 380 G 380 (399)
T ss_pred E
T ss_conf 9
No 166
>TIGR02845 spore_V_AD stage V sporulation protein AD; InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation ..
Probab=94.37 E-value=0.095 Score=31.31 Aligned_cols=80 Identities=25% Similarity=0.407 Sum_probs=46.4
Q ss_pred CHHHHHHHC-CCHHHHHHHHHHHHCCCCC--CCCEEEECC-CCCHHH-HHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHH
Q ss_conf 145434320-1003678988997401200--122463056-541389-99999719786570021854093300059999
Q gi|254780489|r 219 GADIFYNAV-KIMAQSAKQSLRKSDLQPQ--DINRFIPHQ-ANSRII-QKVCEKIGLSKRIMVNSLKDFGNSSSASIPLS 293 (325)
Q Consensus 219 g~~v~~~~~-~~~~~~i~~~l~~~gl~~~--did~~i~Hq-~~~~~~-~~~~~~lgi~~~~~~~~l~~~GN~~sAsi~~~ 293 (325)
|.+-||.+- +.|.++|+.+|+|++|+.+ |||+|+-=- -|..+- ...++.|+|| + |--||=+++..=-++
T Consensus 42 ge~SwEkAEr~lm~~Av~~aL~Ka~l~~~PP~vD~~LAGDLLNQ~~~anFvAR~L~iP---f---lGLygACsTs~E~L~ 115 (331)
T TIGR02845 42 GEDSWEKAERKLMEDAVNLALKKANLKKDPPDVDFFLAGDLLNQIITANFVARELGIP---F---LGLYGACSTSMETLA 115 (331)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC---C---EECCCHHHHHHHHHH
T ss_conf 7201899999999999999875358712787211120103666789998988745888---2---340213578999999
Q ss_pred HHHHHHHCCCC
Q ss_conf 99999806789
Q gi|254780489|r 294 LSLENQRKPFQ 304 (325)
Q Consensus 294 L~~~~~~g~i~ 304 (325)
|.-.+=+|.+-
T Consensus 116 ~gA~lv~GGfA 126 (331)
T TIGR02845 116 LGAMLVDGGFA 126 (331)
T ss_pred HHHHHHHCCCH
T ss_conf 99999832002
No 167
>PRK06840 hypothetical protein; Validated
Probab=94.33 E-value=0.071 Score=32.12 Aligned_cols=16 Identities=19% Similarity=0.399 Sum_probs=8.9
Q ss_pred HHHHHHHHCCCCHHHH
Q ss_conf 8999999719786570
Q gi|254780489|r 260 IIQKVCEKIGLSKRIM 275 (325)
Q Consensus 260 ~~~~~~~~lgi~~~~~ 275 (325)
.++...++-|+..+.+
T Consensus 242 ~i~~~L~~~gl~~~DI 257 (337)
T PRK06840 242 VIREALRKSGYTPKDI 257 (337)
T ss_pred HHHHHHHHCCCCHHHC
T ss_conf 9999999849995786
No 168
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=94.23 E-value=0.067 Score=32.27 Aligned_cols=69 Identities=14% Similarity=0.104 Sum_probs=49.6
Q ss_pred HHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHH--HHCCCCCCCH---HHHHHHHHHHH
Q ss_conf 678988997401200122463056541389999997197865700218--5409330005---99999999980
Q gi|254780489|r 232 QSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNSL--KDFGNSSSAS---IPLSLSLENQR 300 (325)
Q Consensus 232 ~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~l--~~~GN~~sAs---i~~~L~~~~~~ 300 (325)
..++++|+++|++++|||.|=+|.+=....-.+.+.|+++++|+-.+- =-+||=-.|| +.+.|.+.+++
T Consensus 289 ~A~~k~L~~agl~~~Did~~EinEAFAaq~l~~~~~l~~d~~kvN~~GGaiAlGHP~GasGaRi~~~l~~~L~~ 362 (387)
T PRK07850 289 QSTAKVLEKAGMKIGDIDLVEINEAFASVVLSWAQVHEPDMDRVNVNGGAIALGHPVGSTGARLITTALHELER 362 (387)
T ss_pred HHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 99999999859983468767860577889999998739979897998648875888121379999999999987
No 169
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.99 E-value=0.19 Score=29.39 Aligned_cols=17 Identities=12% Similarity=0.192 Sum_probs=8.8
Q ss_pred HHHHHHHHHCCCCHHHH
Q ss_conf 38999999719786570
Q gi|254780489|r 259 RIIQKVCEKIGLSKRIM 275 (325)
Q Consensus 259 ~~~~~~~~~lgi~~~~~ 275 (325)
+.++.+.++.|+..+.+
T Consensus 244 ~~~~~~L~~~gl~~~dI 260 (339)
T PRK09258 244 DTWEAFLQQLGWSVEQV 260 (339)
T ss_pred HHHHHHHHHCCCCHHHC
T ss_conf 99999999839998998
No 170
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=93.87 E-value=0.072 Score=32.07 Aligned_cols=69 Identities=16% Similarity=0.126 Sum_probs=40.9
Q ss_pred HHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHH----------HCC-------CCHHHHHHHH--HHCCCCCCCH---
Q ss_conf 67898899740120012246305654138999999----------719-------7865700218--5409330005---
Q gi|254780489|r 232 QSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCE----------KIG-------LSKRIMVNSL--KDFGNSSSAS--- 289 (325)
Q Consensus 232 ~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~----------~lg-------i~~~~~~~~l--~~~GN~~sAs--- 289 (325)
..++++|+++|++++|||.|=+|.+=..-.-.+.+ .|| ++.+|+-.+- =-+||=-.||
T Consensus 321 ~Ai~k~L~ragl~~~Did~~EinEAFAaq~la~~~~l~~~~f~~~~lg~~~~~g~id~~kvN~~GGaIAlGHP~GaTGar 400 (436)
T PRK08963 321 YATPLALERAGLTLADLTLIDMHEAFAAQTLANLQMFASDRFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGAR 400 (436)
T ss_pred HHHHHHHHHCCCCHHHCCEEEEHHHCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHCCCCCCCHHH
T ss_conf 99999999849998999877751235788999999852025667751443333559787758885388757881225899
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999980
Q gi|254780489|r 290 IPLSLSLENQR 300 (325)
Q Consensus 290 i~~~L~~~~~~ 300 (325)
+.+.|.+.+++
T Consensus 401 l~~tl~~~L~~ 411 (436)
T PRK08963 401 MITQTLHELRR 411 (436)
T ss_pred HHHHHHHHHHH
T ss_conf 99999999998
No 171
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=93.86 E-value=0.1 Score=31.08 Aligned_cols=26 Identities=19% Similarity=0.111 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHCCCCCCCCCEEEEE
Q ss_conf 99999999864301322234425884
Q gi|254780489|r 57 IAIQAGDIALRNANIKKDSISLTLLA 82 (325)
Q Consensus 57 la~~Aa~~aL~~a~~~~~dId~ii~~ 82 (325)
...++.+++|++++++|+|||++..+
T Consensus 146 ~~~~~i~~al~~agl~~~dId~v~~H 171 (254)
T cd00327 146 GLARAARKALEGAGLTPSDIDYVEAH 171 (254)
T ss_pred HHHHHHHHHHHHCCCCHHHCCEEEEC
T ss_conf 99999999999839986452579978
No 172
>pfam02801 Ketoacyl-synt_C Beta-ketoacyl synthase, C-terminal domain. The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=93.86 E-value=0.16 Score=29.85 Aligned_cols=77 Identities=14% Similarity=0.220 Sum_probs=51.1
Q ss_pred CHHHHHHHHHHHHCCCCCCCCEEEECCCCCHH-----HHHHHHHCCCCHHHHH-H-HHHHCCCCCCCHHHHHHHH---HH
Q ss_conf 00367898899740120012246305654138-----9999997197865700-2-1854093300059999999---99
Q gi|254780489|r 229 IMAQSAKQSLRKSDLQPQDINRFIPHQANSRI-----IQKVCEKIGLSKRIMV-N-SLKDFGNSSSASIPLSLSL---EN 298 (325)
Q Consensus 229 ~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~-----~~~~~~~lgi~~~~~~-~-~l~~~GN~~sAsi~~~L~~---~~ 298 (325)
...++++++|++++++++|||++-.|--+-.. .+.+.+.++=.....+ . +=..+||+-+|+-.+.+.. .+
T Consensus 26 ~~~~~i~~Al~~agi~p~~I~~i~aHgtgT~~gD~~E~~ai~~~f~~~~~~~~i~S~Ks~~GH~~~AsG~~~li~~~l~l 105 (117)
T pfam02801 26 AQARAIRAALADAGLDPEDVDYVEAHGTGTPLGDPIEAEALKAVFGPGRRPLPVGSVKSNIGHLEAAAGVAGLIKAVLAL 105 (117)
T ss_pred HHHHHHHHHHHHHCCCHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99999999999909899897989875376854379999999999663778876777411535563767999999999999
Q ss_pred HHCCCCC
Q ss_conf 8067899
Q gi|254780489|r 299 QRKPFQK 305 (325)
Q Consensus 299 ~~g~i~~ 305 (325)
+.+.+.|
T Consensus 106 ~~g~ipp 112 (117)
T pfam02801 106 RHGVIPP 112 (117)
T ss_pred HCCCCCC
T ss_conf 7697388
No 173
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=93.70 E-value=0.073 Score=32.05 Aligned_cols=76 Identities=22% Similarity=0.312 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEECCCCCHHH----HH------HHHHCCC-------CHHHHHHH--HHHCCCCCCCH--
Q ss_conf 3678988997401200122463056541389----99------9997197-------86570021--85409330005--
Q gi|254780489|r 231 AQSAKQSLRKSDLQPQDINRFIPHQANSRII----QK------VCEKIGL-------SKRIMVNS--LKDFGNSSSAS-- 289 (325)
Q Consensus 231 ~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~----~~------~~~~lgi-------~~~~~~~~--l~~~GN~~sAs-- 289 (325)
...++++|+++|++++|||.|=+|-+-.... +. ..+.||+ +.+|+-.+ .--+||=-.||
T Consensus 310 v~A~~k~L~~agl~~~DiD~~EinEAFAaq~la~~~~~~~~~~~~~~lG~~~~~~~id~~kvN~~GGaiAlGHP~GaTGa 389 (426)
T PRK08170 310 VHAATPLLQRHGLTLEDIDYWEINEAFAAQVLACLAAWADEEYCREQLGLDGALGELDRERLNVDGGAIALGHPVGASGA 389 (426)
T ss_pred HHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHH
T ss_conf 99999999980998676552434046689999999874001356776076533456981228988548874777210389
Q ss_pred -HHHHHHHHHHHCCCCCC
Q ss_conf -99999999980678999
Q gi|254780489|r 290 -IPLSLSLENQRKPFQKG 306 (325)
Q Consensus 290 -i~~~L~~~~~~g~i~~G 306 (325)
+.+.|.+.+++...+-|
T Consensus 390 rl~~~l~~~L~~~~~~~g 407 (426)
T PRK08170 390 RIVLHLLHALKRRGTKRG 407 (426)
T ss_pred HHHHHHHHHHHHHCCCEE
T ss_conf 999999999998199989
No 174
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=93.60 E-value=0.07 Score=32.15 Aligned_cols=16 Identities=0% Similarity=-0.049 Sum_probs=7.6
Q ss_pred HHHHHHHHHCCCCCCC
Q ss_conf 7898899740120012
Q gi|254780489|r 233 SAKQSLRKSDLQPQDI 248 (325)
Q Consensus 233 ~i~~~l~~~gl~~~di 248 (325)
.++.+.++.|+.++.+
T Consensus 260 ~~~~v~~~lgl~~ek~ 275 (327)
T PRK05963 260 IVDKVCETLGIPRAKA 275 (327)
T ss_pred HHHHHHHHCCCCHHHH
T ss_conf 9999999829797870
No 175
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=93.54 E-value=0.093 Score=31.37 Aligned_cols=69 Identities=14% Similarity=0.213 Sum_probs=48.8
Q ss_pred HHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHH--HHHCCCCCCCH---HHHHHHHHHHH
Q ss_conf 67898899740120012246305654138999999719786570021--85409330005---99999999980
Q gi|254780489|r 232 QSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNS--LKDFGNSSSAS---IPLSLSLENQR 300 (325)
Q Consensus 232 ~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~--l~~~GN~~sAs---i~~~L~~~~~~ 300 (325)
..++++|+++|++++|||.|=.|.+=....-.+.+.|+|+.+|+-.+ .--+||=-.|| +...|.+.+++
T Consensus 262 ~A~~~~L~~agl~~~Did~~EinEAFA~q~l~~~~~l~id~~kvN~~GGaiAlGHP~GasGaRi~~tl~~~L~~ 335 (361)
T PRK06690 262 FAVNKLLNEMNMKVEDIDYFEINEAFASKVVACAKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKR 335 (361)
T ss_pred HHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 99999999759971226511202677888999999838988884998558874888034589999999999987
No 176
>PRK07855 lipid-transfer protein; Provisional
Probab=93.45 E-value=0.28 Score=28.24 Aligned_cols=14 Identities=0% Similarity=0.031 Sum_probs=5.1
Q ss_pred HHHHHHCCCCCCCC
Q ss_conf 99864301322234
Q gi|254780489|r 63 DIALRNANIKKDSI 76 (325)
Q Consensus 63 ~~aL~~a~~~~~dI 76 (325)
++-+++.|.+.+++
T Consensus 155 ~rym~~yG~t~E~l 168 (386)
T PRK07855 155 RRYMHEYGATSEDF 168 (386)
T ss_pred HHHHHHHCCCHHHH
T ss_conf 99999979599999
No 177
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.17 E-value=0.32 Score=27.84 Aligned_cols=12 Identities=25% Similarity=0.105 Sum_probs=4.8
Q ss_pred HHHHHCCCCHHH
Q ss_conf 999971978657
Q gi|254780489|r 263 KVCEKIGLSKRI 274 (325)
Q Consensus 263 ~~~~~lgi~~~~ 274 (325)
.+.++.|+..+.
T Consensus 238 ~~L~~~gl~~~D 249 (329)
T PRK07204 238 KLLMDTGYSLAD 249 (329)
T ss_pred HHHHHCCCCHHH
T ss_conf 999871999788
No 178
>PRK06158 thiolase; Provisional
Probab=93.00 E-value=0.097 Score=31.23 Aligned_cols=13 Identities=23% Similarity=0.524 Sum_probs=10.5
Q ss_pred CCCCEEEEEEEEE
Q ss_conf 6662099999973
Q gi|254780489|r 2 IKSSSCILGFGHA 14 (325)
Q Consensus 2 ~~~~~~I~g~g~~ 14 (325)
++.++.|+|+|..
T Consensus 6 l~~rvAIvGvG~t 18 (384)
T PRK06158 6 LRGRTAIVGAATA 18 (384)
T ss_pred CCCCEEEEEEEEC
T ss_conf 7883899975551
No 179
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=92.86 E-value=0.36 Score=27.52 Aligned_cols=20 Identities=5% Similarity=0.033 Sum_probs=11.6
Q ss_pred CCHHHHHHHHHHHHCCCCCC
Q ss_conf 10036789889974012001
Q gi|254780489|r 228 KIMAQSAKQSLRKSDLQPQD 247 (325)
Q Consensus 228 ~~~~~~i~~~l~~~gl~~~d 247 (325)
+.++-.+...++..|+.+++
T Consensus 278 eaFa~~~l~~~e~lGl~~~g 297 (375)
T cd00829 278 DCFTIAELLALEDLGFCEKG 297 (375)
T ss_pred CCCHHHHHHHHHHCCCCCCC
T ss_conf 57669999999980999777
No 180
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=92.73 E-value=0.34 Score=27.71 Aligned_cols=80 Identities=15% Similarity=0.102 Sum_probs=51.3
Q ss_pred HHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHH--HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEE
Q ss_conf 6789889974012001224630565413899999971978657002--18540933000599999999980678999899
Q gi|254780489|r 232 QSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVN--SLKDFGNSSSASIPLSLSLENQRKPFQKGEKI 309 (325)
Q Consensus 232 ~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~--~l~~~GN~~sAsi~~~L~~~~~~g~i~~Gd~v 309 (325)
..++++|+++|++++|||.+=.|-+-....-...+.||++++++-. -+--+||=-.|+=...+.++..+=+-+.|.+.
T Consensus 289 ~A~~~al~~agl~~~Did~~EiheaFa~~~l~~~~~lg~~~~~vN~~GG~ia~GHP~GATG~~~~~~l~~~L~~~~g~~g 368 (386)
T cd00751 289 PAIPKALKRAGLTLDDIDLIEINEAFAAQALACLKELGLDPEKVNVNGGAIALGHPLGASGARIVVTLLHELKRRGGRYG 368 (386)
T ss_pred HHHHHHHHHCCCCHHHCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEE
T ss_conf 99999999839984448843510566878999999829877667888559860998021589999999999988389889
Q ss_pred EE
Q ss_conf 99
Q gi|254780489|r 310 LT 311 (325)
Q Consensus 310 ll 311 (325)
+.
T Consensus 369 l~ 370 (386)
T cd00751 369 LA 370 (386)
T ss_pred EE
T ss_conf 99
No 181
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=92.69 E-value=0.65 Score=25.85 Aligned_cols=43 Identities=23% Similarity=0.304 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHH
Q ss_conf 3678988997401200122463056541389999997197865
Q gi|254780489|r 231 AQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKR 273 (325)
Q Consensus 231 ~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~ 273 (325)
...++++|+++|++++|||.+=+|-+=...--...+.||+.++
T Consensus 272 ~~A~~~al~~aGl~~~Did~~Ei~eaFa~~~l~~~e~lg~~~~ 314 (393)
T cd00826 272 IEAARKALEKAGLGIGDLDLIEAHDAFAANACATNEALGLCPE 314 (393)
T ss_pred HHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCC
T ss_conf 9999999998299800166456324234999999998098912
No 182
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=92.62 E-value=0.27 Score=28.34 Aligned_cols=29 Identities=21% Similarity=0.076 Sum_probs=16.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf 22444462224434325442001122057
Q gi|254780489|r 143 LLSRRINLEDKDTAIIFGDAAGAVVLAPS 171 (325)
Q Consensus 143 ~~S~~~d~~d~~~~~lfGDgA~A~il~~~ 171 (325)
..|..++.+......-+||-+--+++++.
T Consensus 216 s~StL~~dse~~Mgwdv~d~G~~~vlSrd 244 (356)
T COG3424 216 SFSTLYPDSEDIMGWDVGDQGLKVVLSRD 244 (356)
T ss_pred CCCCCCCCCCCCCCEEECCCCEEEEECCC
T ss_conf 54546886210011530488479997573
No 183
>PRK08371 consensus
Probab=92.43 E-value=0.1 Score=31.11 Aligned_cols=10 Identities=30% Similarity=0.547 Sum_probs=7.2
Q ss_pred CEEEEEEEEE
Q ss_conf 2099999973
Q gi|254780489|r 5 SSCILGFGHA 14 (325)
Q Consensus 5 ~~~I~g~g~~ 14 (325)
+++|+|+|.-
T Consensus 3 ~v~IVg~~~T 12 (388)
T PRK08371 3 KVIIVGVGMT 12 (388)
T ss_pred CEEEEEEEEC
T ss_conf 1899996034
No 184
>PRK08256 lipid-transfer protein; Provisional
Probab=92.35 E-value=0.11 Score=30.86 Aligned_cols=22 Identities=14% Similarity=0.246 Sum_probs=12.8
Q ss_pred CCEEEEEEEEEC---CCCCCCHHHH
Q ss_conf 620999999735---8861388899
Q gi|254780489|r 4 SSSCILGFGHAV---PNQCIHNSII 25 (325)
Q Consensus 4 ~~~~I~g~g~~l---P~~~i~n~~l 25 (325)
|+++|+|+|.-= |....+-.+|
T Consensus 1 nkV~IvGvg~T~f~k~~~~~~~~~L 25 (391)
T PRK08256 1 NKVFVAGVGMTPFEKPGASWDYPDM 25 (391)
T ss_pred CEEEEEEEEECCCCCCCCCCCHHHH
T ss_conf 9099997420453689999999999
No 185
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=92.33 E-value=0.062 Score=32.53 Aligned_cols=75 Identities=19% Similarity=0.210 Sum_probs=41.8
Q ss_pred HHHHHHHHHHCCCCCCCCEEEECCCCCHHHH----------HHHHHCC-------CCHHHHHHH--HHHCCCCCCCH---
Q ss_conf 6789889974012001224630565413899----------9999719-------786570021--85409330005---
Q gi|254780489|r 232 QSAKQSLRKSDLQPQDINRFIPHQANSRIIQ----------KVCEKIG-------LSKRIMVNS--LKDFGNSSSAS--- 289 (325)
Q Consensus 232 ~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~----------~~~~~lg-------i~~~~~~~~--l~~~GN~~sAs--- 289 (325)
..++++|+++|++++|||.|=+|.+=....- .+.+.|| |+.+|+-.+ -=-+||=-.||
T Consensus 314 ~A~~~~L~ragl~~~Did~~EinEAFAaq~la~~~~~~~~~~~~~~lgl~~~~~~id~~kvN~~GGaiAlGHP~GaSGar 393 (428)
T PRK09268 314 YAVPRLLARNGLTLQDFDFYEIHEAFASQVLATLKAWESEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAATGGR 393 (428)
T ss_pred HHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHCCCCCCCHHH
T ss_conf 99999999859997984799874667889999988640046678862765323568776548885388748880334899
Q ss_pred HHHHHHHHHHHCCCCCC
Q ss_conf 99999999980678999
Q gi|254780489|r 290 IPLSLSLENQRKPFQKG 306 (325)
Q Consensus 290 i~~~L~~~~~~g~i~~G 306 (325)
+.+.|.+.+++...+.|
T Consensus 394 iv~~l~~~L~~~~~~~G 410 (428)
T PRK09268 394 IVATLAKLLAEKGSGRG 410 (428)
T ss_pred HHHHHHHHHHHHCCCEE
T ss_conf 99999999998399989
No 186
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=91.67 E-value=0.41 Score=27.17 Aligned_cols=91 Identities=16% Similarity=0.173 Sum_probs=56.0
Q ss_pred CCHHHHHHHHHHHHCCCCCCCCEE----EECCCCCHHHHHHHHHCCCCHHHH---HH---HHHHCCCCCCCHHHHHHHHH
Q ss_conf 100367898899740120012246----305654138999999719786570---02---18540933000599999999
Q gi|254780489|r 228 KIMAQSAKQSLRKSDLQPQDINRF----IPHQANSRIIQKVCEKIGLSKRIM---VN---SLKDFGNSSSASIPLSLSLE 297 (325)
Q Consensus 228 ~~~~~~i~~~l~~~gl~~~did~~----i~Hq~~~~~~~~~~~~lgi~~~~~---~~---~l~~~GN~~sAsi~~~L~~~ 297 (325)
..+..+.+++|+.+|+..+|||+| +| ....+..++.|||+.+.. .. -|..+|--+..-+.-++.++
T Consensus 294 ~a~~~~~~~al~~ag~~~~di~~~DlYSCF----P~av~~~~~~lgl~~~~~~r~lTvTGGl~f~GGp~NnY~~hsia~m 369 (502)
T PRK08257 294 PAIRAAGARALALAGLGIDDIDAFDLYSCF----PSAVQMAARELGLPLDDDPRPLTVTGGLTFFGGPGNNYVTHSIAEM 369 (502)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEHHHCC----HHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHH
T ss_conf 899999999999809980014611034216----3899999997399966788860340675556787503789999999
Q ss_pred HHHCCCCCCCEEEEEEECCCCCCCC
Q ss_conf 9806789998999998615510201
Q gi|254780489|r 298 NQRKPFQKGEKILTISCRRGNDRGI 322 (325)
Q Consensus 298 ~~~g~i~~Gd~vll~~~G~G~s~ga 322 (325)
.++=|-+||+..|+.+-|.=+|--+
T Consensus 370 v~~lR~~~~~~GLvtangG~lTKh~ 394 (502)
T PRK08257 370 VERLRANPGRRGLVTANGGYLTKHS 394 (502)
T ss_pred HHHHHHCCCCEEEEEECCCEEEEEE
T ss_conf 9999718997389980246264224
No 187
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=91.26 E-value=0.16 Score=29.76 Aligned_cols=18 Identities=28% Similarity=0.349 Sum_probs=12.9
Q ss_pred CCCCEEEEEEEEECCCCCC
Q ss_conf 6662099999973588613
Q gi|254780489|r 2 IKSSSCILGFGHAVPNQCI 20 (325)
Q Consensus 2 ~~~~~~I~g~g~~lP~~~i 20 (325)
++.+++|+|+|. .|-.+.
T Consensus 3 l~gk~aIvG~G~-tp~~r~ 20 (388)
T PRK08142 3 IKGKAYIVGAYE-HPTRKA 20 (388)
T ss_pred CCCEEEEEEEEE-CCCCCC
T ss_conf 787099995434-566238
No 188
>PRK04262 hypothetical protein; Provisional
Probab=91.23 E-value=0.76 Score=25.38 Aligned_cols=15 Identities=0% Similarity=0.005 Sum_probs=6.5
Q ss_pred HHHHHHHHHCCCCCC
Q ss_conf 789889974012001
Q gi|254780489|r 233 SAKQSLRKSDLQPQD 247 (325)
Q Consensus 233 ~i~~~l~~~gl~~~d 247 (325)
.++.+.++.|+.++.
T Consensus 241 ii~~~~k~Lgi~~ek 255 (346)
T PRK04262 241 FPLRAAKMLGFTKEQ 255 (346)
T ss_pred HHHHHHHHCCCCHHH
T ss_conf 999999982999899
No 189
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=90.42 E-value=0.17 Score=29.67 Aligned_cols=91 Identities=12% Similarity=0.050 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHH----------------HHHHH----HHHCCCCCCCHH
Q ss_conf 3678988997401200122463056541389999997197865----------------70021----854093300059
Q gi|254780489|r 231 AQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKR----------------IMVNS----LKDFGNSSSASI 290 (325)
Q Consensus 231 ~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~----------------~~~~~----l~~~GN~~sAsi 290 (325)
...++++|+++|++++|||.+-.|-+-....-.+.|.||+.++ +.+.| .--+||-..++=
T Consensus 263 ~~A~~~al~~AGl~~~DiD~~Ei~daFa~~~l~~~E~lGl~~~Ge~~~~~~~g~~~~~G~~pvN~~GG~ls~Ghp~gatG 342 (389)
T PRK07516 263 RRAWQRALEQAGVTLDDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAKDGRLPVNPSGGLKAKGHPIGATG 342 (389)
T ss_pred HHHHHHHHHHCCCCHHHCCEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCEECCCHHHHHCCCCCCHHH
T ss_conf 99999999984998888244543343379999999984999777257787658866799843717841876698101369
Q ss_pred HHHHHHHHH----H---CCCCCCCEEEEEEECCCCCCC
Q ss_conf 999999998----0---678999899999861551020
Q gi|254780489|r 291 PLSLSLENQ----R---KPFQKGEKILTISCRRGNDRG 321 (325)
Q Consensus 291 ~~~L~~~~~----~---g~i~~Gd~vll~~~G~G~s~g 321 (325)
...+.++.. + .+++.-+..+..+.|...+..
T Consensus 343 ~~~~~e~~~QLrg~ag~~QV~~a~~~l~~~~GG~~~~~ 380 (389)
T PRK07516 343 VSMHVLAAMQLTGEAGGMQIPGAKLAGVFNMGGAAVAN 380 (389)
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHE
T ss_conf 99999999996235367778987789995778676716
No 190
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=90.06 E-value=0.3 Score=28.03 Aligned_cols=13 Identities=23% Similarity=0.498 Sum_probs=10.6
Q ss_pred CCCCEEEEEEEEE
Q ss_conf 6662099999973
Q gi|254780489|r 2 IKSSSCILGFGHA 14 (325)
Q Consensus 2 ~~~~~~I~g~g~~ 14 (325)
++++++|+|+|..
T Consensus 8 ~~~~VaIvG~G~T 20 (393)
T PRK06065 8 FKRRVAVIGAGMT 20 (393)
T ss_pred CCCCEEEEEEEEE
T ss_conf 3498899986570
No 191
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=90.01 E-value=0.21 Score=29.09 Aligned_cols=83 Identities=10% Similarity=0.072 Sum_probs=32.5
Q ss_pred HHHHHHHHHCCCCCCCCEEEECCCC-CHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf 7898899740120012246305654-138999999719786570021854093300059999999998067899989999
Q gi|254780489|r 233 SAKQSLRKSDLQPQDINRFIPHQAN-SRIIQKVCEKIGLSKRIMVNSLKDFGNSSSASIPLSLSLENQRKPFQKGEKILT 311 (325)
Q Consensus 233 ~i~~~l~~~gl~~~did~~i~Hq~~-~~~~~~~~~~lgi~~~~~~~~l~~~GN~~sAsi~~~L~~~~~~g~i~~Gd~vll 311 (325)
.+++++.+......-++-.+-|--+ .-+.+.+.-.|.+...+++-++ |.-..+.-+.|+..-.+.+-.+-+.++.
T Consensus 326 Ai~~vfg~~~~~v~S~Ks~iGH~~~AaG~~e~i~~~lal~~~~ipPt~----n~~~~dp~~~l~~v~~~~~~~~~~~al~ 401 (418)
T PRK07910 326 AINNALGGHRPAVYAPKSALGHSVGAVGAVESILTVLALRDGVIPPTL----NLKNLDPEIDLDVVAGEPRPGNYRYAIN 401 (418)
T ss_pred HHHHHHCCCCCCEECCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 999986699984128124342038999999999999997249758899----9899999999543889876799889999
Q ss_pred EEECCCCC
Q ss_conf 98615510
Q gi|254780489|r 312 ISCRRGND 319 (325)
Q Consensus 312 ~~~G~G~s 319 (325)
-+||-|-+
T Consensus 402 nsfGfGG~ 409 (418)
T PRK07910 402 NSFGFGGH 409 (418)
T ss_pred ECCCCCCE
T ss_conf 45055810
No 192
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=89.70 E-value=0.44 Score=26.92 Aligned_cols=40 Identities=10% Similarity=0.112 Sum_probs=17.4
Q ss_pred CCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCC---CCCCCCCCC
Q ss_conf 322234425884310023688743221121002---386333421
Q gi|254780489|r 71 IKKDSISLTLLATSTPDHLLPPSSPLITHRLGL---MQSGAIDLT 112 (325)
Q Consensus 71 ~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~---~~~~~~di~ 112 (325)
|...+.|++|++.+-- .+.|-. ..-.+.+|+ ..|..||-+
T Consensus 158 I~~G~~d~~i~gg~~~-~~~~~~-~~~f~~~~~ls~~~~rPFd~~ 200 (379)
T PRK05952 158 IQTGQCQRVIAGAVES-PITPLT-LAGFQKMGALAKTGAYPFDRQ 200 (379)
T ss_pred HHCCCCCEEEEEEEEE-ECCHHH-HHHHHHCCCCCCCCCCCCCCC
T ss_conf 9839988798678765-248276-899986578344676745468
No 193
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=89.65 E-value=0.44 Score=26.96 Aligned_cols=40 Identities=15% Similarity=0.031 Sum_probs=16.8
Q ss_pred CCCCCCHHHHHHHHHHHH-------CCCCCCCEEEEEEECCCCCCCC
Q ss_conf 933000599999999980-------6789998999998615510201
Q gi|254780489|r 283 GNSSSASIPLSLSLENQR-------KPFQKGEKILTISCRRGNDRGI 322 (325)
Q Consensus 283 GN~~sAsi~~~L~~~~~~-------g~i~~Gd~vll~~~G~G~s~ga 322 (325)
||-..|+=...+.++.++ .+++.-...|..+.|.|.....
T Consensus 334 g~p~ga~G~~~v~Ea~~QLrG~Ag~rQV~~a~~al~~~~GG~~~~~~ 380 (391)
T PRK08313 334 SNPIGASGMIRFAEAALQVMGKAGEHQVPGARKALGHAYGGGSQFFS 380 (391)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEE
T ss_conf 89872679999999999965776566489751899955677121699
No 194
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=89.64 E-value=0.33 Score=27.78 Aligned_cols=22 Identities=9% Similarity=0.232 Sum_probs=12.6
Q ss_pred CCEEEEEEEEECCCCC--CCHHHH
Q ss_conf 6209999997358861--388899
Q gi|254780489|r 4 SSSCILGFGHAVPNQC--IHNSII 25 (325)
Q Consensus 4 ~~~~I~g~g~~lP~~~--i~n~~l 25 (325)
+++.|+|+|..=..+. .|-.||
T Consensus 1 R~vaIvG~g~t~~gr~~~~s~~eL 24 (385)
T PRK12578 1 RRVAVIGVGNSKFGKRDDVSIQEL 24 (385)
T ss_pred CCEEEEEEEEEECCCCCCCCHHHH
T ss_conf 969999976622410799799999
No 195
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=89.59 E-value=0.32 Score=27.87 Aligned_cols=81 Identities=7% Similarity=0.035 Sum_probs=35.0
Q ss_pred HHHHHHHHCCCCCCCCEEEECCCC-CHHHHHHHHHCCCCHHHH-HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf 898899740120012246305654-138999999719786570-021854093300059999999998067899989999
Q gi|254780489|r 234 AKQSLRKSDLQPQDINRFIPHQAN-SRIIQKVCEKIGLSKRIM-VNSLKDFGNSSSASIPLSLSLENQRKPFQKGEKILT 311 (325)
Q Consensus 234 i~~~l~~~gl~~~did~~i~Hq~~-~~~~~~~~~~lgi~~~~~-~~~l~~~GN~~sAsi~~~L~~~~~~g~i~~Gd~vll 311 (325)
+++++.+ .+...-++-.+-|.-+ .-+++.+...|-+..+.+ +-+ -|...-+.-+.++...++.+-.+-+.+|.
T Consensus 303 i~~vfg~-~~pvss~Ks~~GH~lgaaG~~e~~~~~l~l~~~~~iPpt----~n~~~~dp~~~~~~v~~~~~~~~~~~~l~ 377 (395)
T PRK09185 303 VAAVFGD-TVPCSSTKPLTGHTLGAAGAVEAAICWLALNRDLPLPGH----VNDGQPDPALPPLYLVENRQALALRYVMS 377 (395)
T ss_pred HHHHHCC-CCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 9998488-862467641104307889999999999999828985998----99999898887654688875689889999
Q ss_pred EEECCCCC
Q ss_conf 98615510
Q gi|254780489|r 312 ISCRRGND 319 (325)
Q Consensus 312 ~~~G~G~s 319 (325)
.+||-|-.
T Consensus 378 nsfGFGG~ 385 (395)
T PRK09185 378 NSFAFGGS 385 (395)
T ss_pred ECCCCCCE
T ss_conf 56148836
No 196
>PRK07937 lipid-transfer protein; Provisional
Probab=89.37 E-value=0.29 Score=28.15 Aligned_cols=11 Identities=36% Similarity=0.824 Sum_probs=9.0
Q ss_pred CCEEEEEEEEE
Q ss_conf 62099999973
Q gi|254780489|r 4 SSSCILGFGHA 14 (325)
Q Consensus 4 ~~~~I~g~g~~ 14 (325)
++|.|+|+|..
T Consensus 2 rdVaIVGvG~t 12 (352)
T PRK07937 2 RDVAVVGFAHA 12 (352)
T ss_pred CCEEEEEEEEC
T ss_conf 85799996406
No 197
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=89.32 E-value=0.56 Score=26.25 Aligned_cols=16 Identities=6% Similarity=0.017 Sum_probs=8.9
Q ss_pred HHHHHHHHHCCCCCCC
Q ss_conf 7898899740120012
Q gi|254780489|r 233 SAKQSLRKSDLQPQDI 248 (325)
Q Consensus 233 ~i~~~l~~~gl~~~di 248 (325)
.++.+.++.|+..+.+
T Consensus 274 iie~i~k~Lgl~~ek~ 289 (353)
T PRK12880 274 LVDCIKEELKLNDDKV 289 (353)
T ss_pred HHHHHHHHCCCCHHHH
T ss_conf 9999999809897870
No 198
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=89.32 E-value=0.28 Score=28.22 Aligned_cols=86 Identities=9% Similarity=0.048 Sum_probs=35.2
Q ss_pred HHHHHHHHHCCCCCCCCEEEECCCCC-HHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf 78988997401200122463056541-38999999719786570021854093300059999999998067899989999
Q gi|254780489|r 233 SAKQSLRKSDLQPQDINRFIPHQANS-RIIQKVCEKIGLSKRIMVNSLKDFGNSSSASIPLSLSLENQRKPFQKGEKILT 311 (325)
Q Consensus 233 ~i~~~l~~~gl~~~did~~i~Hq~~~-~~~~~~~~~lgi~~~~~~~~l~~~GN~~sAsi~~~L~~~~~~g~i~~Gd~vll 311 (325)
.+++++...++....++-.+-|-.+. -+.+.+.-.|-+....++-+ -|.-..+.-+.|+....+.+-.+-.+++.
T Consensus 310 Ai~~~fg~~~~pv~S~K~~iGH~~~AaG~~~~i~~ll~l~~g~ippt----~n~~~~~p~~~l~~v~~~~~~~~~~~al~ 385 (399)
T cd00832 310 ALAAVFGPRGVPVTAPKTMTGRLYAGGAPLDVATALLALRDGVIPPT----VNVTDVPPAYGLDLVTGRPRPAALRTALV 385 (399)
T ss_pred HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 99999669998789954221106999999999999999835961989----99899998888523789987899899999
Q ss_pred EEECCCCCCCC
Q ss_conf 98615510201
Q gi|254780489|r 312 ISCRRGNDRGI 322 (325)
Q Consensus 312 ~~~G~G~s~ga 322 (325)
-+||-|-+--.
T Consensus 386 nsfGfGG~Na~ 396 (399)
T cd00832 386 LARGRGGFNSA 396 (399)
T ss_pred ECCCCCCEEEE
T ss_conf 44056803268
No 199
>pfam08541 ACP_syn_III_C 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal. This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.41, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria.
Probab=89.09 E-value=0.17 Score=29.71 Aligned_cols=68 Identities=22% Similarity=0.290 Sum_probs=39.9
Q ss_pred HHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC-CC----CCCCCCCHHHHHHHHHHHHCCC----CEE
Q ss_conf 64301322234425884310023688743221121002386333-42----1012310125676578874388----505
Q gi|254780489|r 66 LRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLMQSGAI-DL----TGACAGFLYALVMADSYINSHQ----KPV 136 (325)
Q Consensus 66 L~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~~~~~~-di----~~~C~g~l~aL~~A~~~i~~g~----~~v 136 (325)
|+++|++++|||+++........ --.++++||++.-..+ .+ |.++++-..+|..+ ++.+. .++
T Consensus 1 L~~~g~~~~dId~~i~Hq~~~~~-----~~~i~~~lgi~~~k~~~~~~~~GN~~sasip~~L~~~---~~~~~i~~Gd~v 72 (90)
T pfam08541 1 LEKAGLTPDDIDWFVPHQANLRI-----IDAVAKRLGLPPEKVVVNLDRYGNTSAASIPLALDEA---VEEGKLKPGDLV 72 (90)
T ss_pred CCCCCCCHHHCCEEEECCCCHHH-----HHHHHHHHCCCHHHCEEHHHCCCCCCCCHHHHHHHHH---HHCCCCCCCCEE
T ss_conf 94404997999999978888899-----9999998197913250324403776202399999999---981999999989
Q ss_pred EEEEE
Q ss_conf 88620
Q gi|254780489|r 137 LIIAA 141 (325)
Q Consensus 137 LVv~~ 141 (325)
++++.
T Consensus 73 ll~~~ 77 (90)
T pfam08541 73 LLVGF 77 (90)
T ss_pred EEEEE
T ss_conf 99987
No 200
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=89.06 E-value=0.28 Score=28.26 Aligned_cols=23 Identities=22% Similarity=0.203 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHCCCCCCCCCEEEEEEE
Q ss_conf 9999999986430132223442588431
Q gi|254780489|r 57 IAIQAGDIALRNANIKKDSISLTLLATS 84 (325)
Q Consensus 57 la~~Aa~~aL~~a~~~~~dId~ii~~s~ 84 (325)
.|+.-|.++|+. .+.|.+|++.+
T Consensus 101 ~Ai~~A~~~i~~-----G~~d~aivgg~ 123 (332)
T cd00825 101 HALSLAADAVQN-----GKQDIVLAGGS 123 (332)
T ss_pred HHHHHHHHHHHH-----CCCCEEEEEEE
T ss_conf 999999999983-----89987462031
No 201
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=87.46 E-value=0.51 Score=26.50 Aligned_cols=16 Identities=38% Similarity=0.518 Sum_probs=12.0
Q ss_pred CCCCEEEEEEEEECCC
Q ss_conf 6662099999973588
Q gi|254780489|r 2 IKSSSCILGFGHAVPN 17 (325)
Q Consensus 2 ~~~~~~I~g~g~~lP~ 17 (325)
|++++.|+|+|..=-.
T Consensus 5 l~~kvaIvGvG~t~~g 20 (400)
T PRK06157 5 IKDKVAILGMGCSKFG 20 (400)
T ss_pred CCCCEEEEEEEEECCC
T ss_conf 8898899985572055
No 202
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=86.73 E-value=1.2 Score=24.09 Aligned_cols=32 Identities=13% Similarity=0.226 Sum_probs=14.6
Q ss_pred CCCCCCCCCCCCCCCC-CCCCCCCCCCCCCHHHH
Q ss_conf 8874322112100238-63334210123101256
Q gi|254780489|r 90 LPPSSPLITHRLGLMQ-SGAIDLTGACAGFLYAL 122 (325)
Q Consensus 90 ~P~~a~~v~~~Lg~~~-~~~~di~~~C~g~l~aL 122 (325)
.|...+++.+.|.+++ -..++|-.| +|+.+|+
T Consensus 61 ~P~~~a~ml~~L~l~~~~~VLeIGtG-sGY~tAl 93 (214)
T PRK13942 61 AIHMVAIMCELLDLDEGQKVLEIGTG-SGYHAAV 93 (214)
T ss_pred HHHHHHHHHHHHCCCCCCEEEEECCC-CCHHHHH
T ss_conf 49999999997279999979996799-5299999
No 203
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=86.01 E-value=0.56 Score=26.26 Aligned_cols=14 Identities=21% Similarity=0.069 Sum_probs=7.8
Q ss_pred CCEEEEEEECCCCC
Q ss_conf 98999998615510
Q gi|254780489|r 306 GEKILTISCRRGND 319 (325)
Q Consensus 306 Gd~vll~~~G~G~s 319 (325)
.+.+|.-+||-|-+
T Consensus 389 ~~~~lsnSfGFGG~ 402 (412)
T COG0304 389 VRAALSNSFGFGGT 402 (412)
T ss_pred CEEEEECCCCCCCC
T ss_conf 02898615046872
No 204
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=85.45 E-value=0.91 Score=24.89 Aligned_cols=20 Identities=10% Similarity=0.189 Sum_probs=10.4
Q ss_pred HHHHHH-HCCCCEEEEEEECC
Q ss_conf 657887-43885058862012
Q gi|254780489|r 124 MADSYI-NSHQKPVLIIAANL 143 (325)
Q Consensus 124 ~A~~~i-~~g~~~vLVv~~e~ 143 (325)
.|...+ +.|..++.|+.+|-
T Consensus 115 ~Ar~~L~~lG~~NV~vv~GDG 135 (317)
T PRK13943 115 IAKRNVERLGIENVIFVCGDG 135 (317)
T ss_pred HHHHHHHHCCCCCEEEEECCC
T ss_conf 999999977998649997998
No 205
>KOG1394 consensus
Probab=84.35 E-value=0.68 Score=25.71 Aligned_cols=50 Identities=20% Similarity=0.147 Sum_probs=18.5
Q ss_pred HHHCCCHHHHHHHHHHHHCCCCCCCCEEE-ECCCCCHHHHHHHHH---CCCCHHHH
Q ss_conf 43201003678988997401200122463-056541389999997---19786570
Q gi|254780489|r 224 YNAVKIMAQSAKQSLRKSDLQPQDINRFI-PHQANSRIIQKVCEK---IGLSKRIM 275 (325)
Q Consensus 224 ~~~~~~~~~~i~~~l~~~gl~~~did~~i-~Hq~~~~~~~~~~~~---lgi~~~~~ 275 (325)
+++.+.-.+.+.++|. -|++- |--|+- ||+-+.-....+.+. -|+.++++
T Consensus 268 EHA~~RgA~I~AE~lG-ygls~-Da~HiT~P~~dG~Ga~~am~raL~~Agl~pe~i 321 (440)
T KOG1394 268 EHAKKRGAPIYAEVLG-YGLSS-DAYHITSPDPDGAGAVLAMERALKDAGLSPEDI 321 (440)
T ss_pred HHHHHCCCCEEHHHHC-CCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHC
T ss_conf 8898749915277645-75256-634347899873058999999998749995655
No 206
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=83.71 E-value=1.3 Score=23.98 Aligned_cols=32 Identities=9% Similarity=0.195 Sum_probs=14.6
Q ss_pred CCCCCCCCCCCCCCCC-CCCCCCCCCCCCCHHHH
Q ss_conf 8874322112100238-63334210123101256
Q gi|254780489|r 90 LPPSSPLITHRLGLMQ-SGAIDLTGACAGFLYAL 122 (325)
Q Consensus 90 ~P~~a~~v~~~Lg~~~-~~~~di~~~C~g~l~aL 122 (325)
.|.+-+++.+.|.++. -..++|-.|| |+.+|+
T Consensus 57 ~P~~~a~ml~~L~~~~~~~VLeIGtGs-GY~tAl 89 (205)
T PRK13944 57 APHMVAMMCELIEPRPGMKILEVGTGS-GYQAAV 89 (205)
T ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCC-CHHHHH
T ss_conf 799999999970689999899978985-199999
No 207
>pfam01135 PCMT Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT).
Probab=83.54 E-value=1.3 Score=23.81 Aligned_cols=22 Identities=14% Similarity=0.271 Sum_probs=9.9
Q ss_pred CCCCCCCCCCCCCCCC-CCCCCC
Q ss_conf 8874322112100238-633342
Q gi|254780489|r 90 LPPSSPLITHRLGLMQ-SGAIDL 111 (325)
Q Consensus 90 ~P~~a~~v~~~Lg~~~-~~~~di 111 (325)
.|.+.+++.+.|.++. -..++|
T Consensus 58 ~P~~~a~ml~~L~l~~g~~VLeI 80 (205)
T pfam01135 58 APHMHAMMLELLELKPGMRVLEI 80 (205)
T ss_pred HHHHHHHHHHHCCCCCCCEEEEE
T ss_conf 38999999997078999989996
No 208
>pfam02801 Ketoacyl-synt_C Beta-ketoacyl synthase, C-terminal domain. The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=83.27 E-value=0.44 Score=26.97 Aligned_cols=46 Identities=20% Similarity=0.200 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEEE-EEEECCCCCCCCCCCCCCCC
Q ss_conf 999999999864301322234425884-31002368874322112100
Q gi|254780489|r 56 DIAIQAGDIALRNANIKKDSISLTLLA-TSTPDHLLPPSSPLITHRLG 102 (325)
Q Consensus 56 ~la~~Aa~~aL~~a~~~~~dId~ii~~-s~t~d~~~P~~a~~v~~~Lg 102 (325)
+-..++.++||++++++|+|||+|-.. +.|+ .-.+.-+.-+.+.++
T Consensus 25 ~~~~~~i~~Al~~agi~p~~I~~i~aHgtgT~-~gD~~E~~ai~~~f~ 71 (117)
T pfam02801 25 PAQARAIRAALADAGLDPEDVDYVEAHGTGTP-LGDPIEAEALKAVFG 71 (117)
T ss_pred HHHHHHHHHHHHHHCCCHHHCCEEEEECCCCC-CCCHHHHHHHHHHHC
T ss_conf 99999999999990989989798987537685-437999999999966
No 209
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=83.09 E-value=0.53 Score=26.43 Aligned_cols=13 Identities=8% Similarity=0.202 Sum_probs=6.4
Q ss_pred CCCCCCEEEEEEE
Q ss_conf 2223442588431
Q gi|254780489|r 72 KKDSISLTLLATS 84 (325)
Q Consensus 72 ~~~dId~ii~~s~ 84 (325)
.-.+.|.+|++.+
T Consensus 190 r~G~~D~~iaGG~ 202 (425)
T PRK06501 190 RRGETDRALCIAT 202 (425)
T ss_pred HCCCCCEEEEEEE
T ss_conf 7589888999332
No 210
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=82.70 E-value=1.4 Score=23.63 Aligned_cols=33 Identities=18% Similarity=0.241 Sum_probs=16.3
Q ss_pred CCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCHHHH
Q ss_conf 68874322112100238-63334210123101256
Q gi|254780489|r 89 LLPPSSPLITHRLGLMQ-SGAIDLTGACAGFLYAL 122 (325)
Q Consensus 89 ~~P~~a~~v~~~Lg~~~-~~~~di~~~C~g~l~aL 122 (325)
..|.+.+++.+.|.+++ -..++|-.|| |+.+|+
T Consensus 62 s~P~~~A~ml~~L~l~~~~~VLeIGtGs-GY~tAl 95 (213)
T PRK00312 62 SQPYMVARMTELLELKPGDRVLEIGTGS-GYQAAV 95 (213)
T ss_pred CHHHHHHHHHHHHCCCCCCEEEEECCCC-CHHHHH
T ss_conf 6799999999984368997599965986-099999
No 211
>TIGR00080 pimt protein-L-isoaspartate O-methyltransferase; InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase () (PCMT) (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyzes the transfer of a methyl group from S- adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerization of normal L-aspartyl and L- asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process.
Probab=82.67 E-value=1.7 Score=23.16 Aligned_cols=47 Identities=17% Similarity=0.284 Sum_probs=25.1
Q ss_pred CCCCCCCCCC--CC-CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCC
Q ss_conf 4322112100--23-86333421012310125676578874388505886201224
Q gi|254780489|r 93 SSPLITHRLG--LM-QSGAIDLTGACAGFLYALVMADSYINSHQKPVLIIAANLLS 145 (325)
Q Consensus 93 ~a~~v~~~Lg--~~-~~~~~di~~~C~g~l~aL~~A~~~i~~g~~~vLVv~~e~~S 145 (325)
+.+...+-|. +. ...++||-+|| |..+| -+|.-+ .++.+||+-|.+.
T Consensus 68 mvA~m~~yL~nhL~~~~~vLeiG~GS-GY~aa-vlA~~v----~~~G~V~SiEri~ 117 (228)
T TIGR00080 68 MVAKMTEYLENHLKPGAKVLEIGTGS-GYQAA-VLAEIV----GRDGLVVSIERIP 117 (228)
T ss_pred HHHHHHHHHHHHCCCCCEEEEECCCC-HHHHH-HHHHHH----HCCCEEEEEEECH
T ss_conf 99999998885214035566504785-58999-999987----1397189985357
No 212
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=81.15 E-value=0.64 Score=25.90 Aligned_cols=68 Identities=10% Similarity=0.130 Sum_probs=30.2
Q ss_pred CCCCCEEEECCCCC-HHHHHHHHHCCCCHHHHHH--HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
Q ss_conf 00122463056541-3899999971978657002--185409330005999999999806789998999998615510
Q gi|254780489|r 245 PQDINRFIPHQANS-RIIQKVCEKIGLSKRIMVN--SLKDFGNSSSASIPLSLSLENQRKPFQKGEKILTISCRRGND 319 (325)
Q Consensus 245 ~~did~~i~Hq~~~-~~~~~~~~~lgi~~~~~~~--~l~~~GN~~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~G~s 319 (325)
...++..+-|..+. -+++.+.-.|-+....++- ++.+ ..+. .|+...++.+-.+-+.+|.-+||-|-.
T Consensus 336 v~S~Ks~~GH~lgAaGa~e~i~~~lal~~~~ipPt~n~~~-----p~d~--~l~~v~~~~~~~~~~~~l~nsfgFGG~ 406 (415)
T PRK07103 336 INTTKSLVGHGLSAAGIVELIATLLQMRAGRLHPSRNLDE-----PIDP--SFDWVRSTAGSHDIHRALSLSIGFGGI 406 (415)
T ss_pred EECCCHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-----CCCC--CCCCCCCCCCCCCCCEEEEEEECCCCE
T ss_conf 7586443203579999999999999984395089999899-----8997--658678877348888999960258741
No 213
>PRK07591 threonine synthase; Validated
Probab=79.74 E-value=2.7 Score=21.76 Aligned_cols=68 Identities=12% Similarity=0.121 Sum_probs=43.5
Q ss_pred EECCCC-CHHHHHHHHHCC----CCHHHHHH---HHHH-CC---CCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
Q ss_conf 305654-138999999719----78657002---1854-09---330005999999999806789998999998615510
Q gi|254780489|r 252 IPHQAN-SRIIQKVCEKIG----LSKRIMVN---SLKD-FG---NSSSASIPLSLSLENQRKPFQKGEKILTISCRRGND 319 (325)
Q Consensus 252 i~Hq~~-~~~~~~~~~~lg----i~~~~~~~---~l~~-~G---N~~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~G~s 319 (325)
+.++.+ ...++.+.+.=| ++.+.+.. .+.+ -| -..+|..+-+|.++.++|.|+++|+|+++-.|+|+-
T Consensus 314 ig~P~~~~~~l~avr~sgG~~v~VsD~Ei~~A~~~La~~eGi~vEpasA~alAgl~kl~e~G~i~~de~VV~~lTG~GLK 393 (422)
T PRK07591 314 IGNPADGPYALDIARRTGGAIEDVTDEEIIEGIKLLARTEGIFTETAGGTTVAVLKKLVEAGKIDPDETTVVYITGNGLK 393 (422)
T ss_pred ECCCCCHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
T ss_conf 07988889999999986998999889999999999997389777860899999999999769999999499990887667
No 214
>PRK05638 threonine synthase; Validated
Probab=78.50 E-value=3.2 Score=21.34 Aligned_cols=68 Identities=18% Similarity=0.260 Sum_probs=43.5
Q ss_pred EECCCCC-HHHHHHHHHCC----CCHHHHHH---HHHHCC---CCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
Q ss_conf 3056541-38999999719----78657002---185409---330005999999999806789998999998615510
Q gi|254780489|r 252 IPHQANS-RIIQKVCEKIG----LSKRIMVN---SLKDFG---NSSSASIPLSLSLENQRKPFQKGEKILTISCRRGND 319 (325)
Q Consensus 252 i~Hq~~~-~~~~~~~~~lg----i~~~~~~~---~l~~~G---N~~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~G~s 319 (325)
++.+.+. .+++++.+.=| ++.+.+.. .+.+-| -..||...-+|.++.++|.|+++|+|+++-.|+|+-
T Consensus 280 I~~P~~~~~~l~avr~sgG~~vaVsD~EI~~a~~lla~eGif~EPasAaa~Agl~kl~e~G~I~~~e~VV~vlTGsGLK 358 (443)
T PRK05638 280 VKNPVMKEKVIEAIRESGGTAVVVNEEEIMAGEKLLANEGIFAELSSAVVMPALLKLVETGFIEKGDRVVLVVTGSGLK 358 (443)
T ss_pred ECCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
T ss_conf 0898899999999998399899828999999999999689147757899999999999769989999299996888777
No 215
>PRK08197 threonine synthase; Validated
Probab=78.45 E-value=3.2 Score=21.32 Aligned_cols=61 Identities=15% Similarity=0.202 Sum_probs=42.0
Q ss_pred HHHHHHHHHCC----CCHHHHHH---HHHH-CCC---CCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
Q ss_conf 38999999719----78657002---1854-093---30005999999999806789998999998615510
Q gi|254780489|r 259 RIIQKVCEKIG----LSKRIMVN---SLKD-FGN---SSSASIPLSLSLENQRKPFQKGEKILTISCRRGND 319 (325)
Q Consensus 259 ~~~~~~~~~lg----i~~~~~~~---~l~~-~GN---~~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~G~s 319 (325)
.+++.+.+.=| ++.+.+.. .+.+ -|- .+||..+-++.++.++|.|+++++|+++-.|.|+-
T Consensus 310 ~~l~av~~s~G~~v~VsD~Ei~~A~~~La~~eGi~~EpasA~alAgl~kl~e~G~i~~~~~VV~~lTG~GlK 381 (402)
T PRK08197 310 LVLDAVRESGGCAIAVDDEAILAALSELAREEGLFACPEGAAALAAAKQLRESGWLKSGERVVLFNTGTGLK 381 (402)
T ss_pred HHHHHHHHHCCEEEEECHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
T ss_conf 999999986998999899999999999998559277736999999999999829999999699990888667
No 216
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=77.36 E-value=4.1 Score=20.58 Aligned_cols=64 Identities=16% Similarity=0.144 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEE----C---CCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCC
Q ss_conf 99999999998643013222344258843100----2---36887432211210023863---33421012310
Q gi|254780489|r 55 TDIAIQAGDIALRNANIKKDSISLTLLATSTP----D---HLLPPSSPLITHRLGLMQSG---AIDLTGACAGF 118 (325)
Q Consensus 55 ~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~----d---~~~P~~a~~v~~~Lg~~~~~---~~di~~~C~g~ 118 (325)
...-.+|+++++++++++++|||+|=++.-|- . .+.-+....|++++|++-+. .-||..|--|.
T Consensus 70 ~~~~~~~i~~~i~~~~~~~~~id~Ig~HGQTi~H~P~~~~TlQiG~~~~ia~~tgi~VV~DFR~~Dia~GGqGA 143 (366)
T PRK09585 70 GRLFAEAVNALLAEAGLSPEDIDAIGSHGQTVRHRPERGFTLQIGDGALLAELTGITVVADFRRRDVAAGGQGA 143 (366)
T ss_pred HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCCCCEEEECCCHHHHHHHHCCCEEHHHHHHHHHCCCCCC
T ss_conf 99999999999998499803632897588876871588635433988999988199760753798986778999
No 217
>TIGR01921 DAP-DH diaminopimelate dehydrogenase; InterPro: IPR010190 This entry represents the diaminopimelate dehydrogenase enzyme which provides an alternate (shortcut) route of lysine biosynthesis in Corynebacterium, Bacterioides, Porphyromonas and other species. The enzyme from Corynebacterium glutamicum has been crystallized and characterised ..
Probab=77.28 E-value=5.7 Score=19.69 Aligned_cols=118 Identities=18% Similarity=0.230 Sum_probs=68.3
Q ss_pred CCCCCEEEEEEEEECCCCCCCHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf 96662099999973588613888999880999768311147508899489887999999999998643013222344258
Q gi|254780489|r 1 MIKSSSCILGFGHAVPNQCIHNSIIERHLNLKLGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTL 80 (325)
Q Consensus 1 M~~~~~~I~g~g~~lP~~~i~n~~l~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii 80 (325)
|.+-.+.|+|.|-- = +. +++.+.-.+. .+..||-+|+=++.-.-+.++++=+..+ ..-..+|||++|
T Consensus 1 M~kiRaaIVGYGNl-G-~~-----V~~ai~~~PD--mElvgv~~Rrd~~t~~va~~~~vy~V~~----~~K~~~dvdv~i 67 (326)
T TIGR01921 1 MSKIRAAIVGYGNL-G-KS-----VEEAIQQAPD--MELVGVFRRRDAETLDVAEELAVYAVVE----DEKELEDVDVLI 67 (326)
T ss_pred CCEEEEEEECCCCH-H-HH-----HHHHHHCCCC--CEEEEEEEECCCCCCCHHHCCCHHHHHH----HHHCCCCEEEEE
T ss_conf 97057888622320-0-79-----9999840898--0489988707887576112252022222----232028825999
Q ss_pred EEEEEE---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEE
Q ss_conf 843100---2368874322112100238633342101231012567657887438850588620
Q gi|254780489|r 81 LATSTP---DHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYINSHQKPVLIIAA 141 (325)
Q Consensus 81 ~~s~t~---d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~g~~~vLVv~~ 141 (325)
.|+-|. .+.-|..|.+ +..+=+||+...-.-+-.+|+.|+. ..++|=||++
T Consensus 68 LC~gsatd~pe~~p~fA~~------~nTvDsfD~H~~Ip~~r~~~DaaA~----~~g~VSvis~ 121 (326)
T TIGR01921 68 LCTGSATDLPEQKPYFAAF------INTVDSFDIHTDIPDLRRTLDAAAK----EAGAVSVISA 121 (326)
T ss_pred ECCCCCCCCCCCCCCCEEE------EECCCCCCCCCCHHHHHHHHHHHHH----HCCCEEEEEE
T ss_conf 7388645554345100122------1012365022420789999999998----6198789983
No 218
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family; InterPro: IPR014188 This entry represents a subfamily of the alcohol dehydrogenase, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This entry includes YhdH from Escherichia coli and YhfP from Bacillus subtilis both of which bind NADPH or NAD, but not zinc. Both proteins have been studied crystallographically for insight into function. .
Probab=76.87 E-value=1.7 Score=23.03 Aligned_cols=19 Identities=11% Similarity=0.282 Sum_probs=11.9
Q ss_pred EEECCCCCHHHHHHHHHCC
Q ss_conf 6305654138999999719
Q gi|254780489|r 251 FIPHQANSRIIQKVCEKIG 269 (325)
Q Consensus 251 ~i~Hq~~~~~~~~~~~~lg 269 (325)
.+|..--..+|+.++..|.
T Consensus 275 ~~p~~~R~~~W~RLA~dl~ 293 (330)
T TIGR02823 275 YCPMALREAAWQRLATDLK 293 (330)
T ss_pred CCCHHHHHHHHHHHHHHCC
T ss_conf 1887899999998874159
No 219
>TIGR01287 nifH nitrogenase iron protein; InterPro: IPR005977 The enzyme responsible for nitrogen fixation, the nitrogenase, shows a high degree of conservation of structure, function, and amino acid sequence across wide phylogenetic ranges. All known Mo-nitrogenases consist of two components, component I (also called dinitrogenase, or Fe-Mo protein), an alpha2beta2 tetramer encoded by the nifD and nifK genes, and component II (dinitrogenase reductase, or Fe protein) a homodimer encoded by the nifH gene , . Two operons, nifDK and nifEN, encode a tetrameric (alpha2beta2 and N2E2) enzymatic complex. Nitrogenase contains two unusual rare metal clusters; one of them is the iron molybdenum cofactor (FeMo-co), which is considered to be the site of dinitrogen reduction and whose biosynthesis requires the products of nifNE and of some other nif genes . It has been proposed that NifNE might serve as a scaffold upon which FeMo-co is built and then inserted into component I .; GO: 0016163 nitrogenase activity, 0009399 nitrogen fixation, 0016612 molybdenum-iron nitrogenase complex.
Probab=75.75 E-value=6.2 Score=19.43 Aligned_cols=21 Identities=19% Similarity=0.302 Sum_probs=10.7
Q ss_pred EEEECCCCCHHHHHHHHHCCC
Q ss_conf 463056541389999997197
Q gi|254780489|r 250 RFIPHQANSRIIQKVCEKIGL 270 (325)
Q Consensus 250 ~~i~Hq~~~~~~~~~~~~lgi 270 (325)
.++|.+-...=++.+..++++
T Consensus 253 ~~iP~Pl~~~eL~~~~~~~~~ 273 (278)
T TIGR01287 253 FVIPTPLEMEELEELLMKYGV 273 (278)
T ss_pred CCCCCCCCHHHHHHHHHHHCH
T ss_conf 527998987899999987111
No 220
>TIGR01751 crot-CoA-red crotonyl-CoA reductase; InterPro: IPR010085 Crotonyl-CoA reductase is responsible for the conversion of crotonyl-CoA to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate , . In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae ..
Probab=75.34 E-value=2.2 Score=22.42 Aligned_cols=30 Identities=17% Similarity=0.139 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHCCCCCC-CEEEEEEECCCCCC
Q ss_conf 99999999980678999-89999986155102
Q gi|254780489|r 290 IPLSLSLENQRKPFQKG-EKILTISCRRGNDR 320 (325)
Q Consensus 290 i~~~L~~~~~~g~i~~G-d~vll~~~G~G~s~ 320 (325)
||-+-..++.++.. .| .=||+++-++|+.-
T Consensus 377 ig~Ah~~~~~N~~~-~Gn~aVLv~A~rpGLgv 407 (409)
T TIGR01751 377 IGKAHQKVLANQHH-QGNVAVLVLAPRPGLGV 407 (409)
T ss_pred HHHHHHHHHHCCCC-CCCEEEEEECCCCCCCC
T ss_conf 27999999847896-57646887327888856
No 221
>PRK13410 molecular chaperone DnaK; Provisional
Probab=74.97 E-value=3.2 Score=21.29 Aligned_cols=56 Identities=18% Similarity=0.251 Sum_probs=32.1
Q ss_pred CHHHHHHHC----CCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHH---HHHHHHHCCCCHHH
Q ss_conf 145434320----100367898899740120012246305654138---99999971978657
Q gi|254780489|r 219 GADIFYNAV----KIMAQSAKQSLRKSDLQPQDINRFIPHQANSRI---IQKVCEKIGLSKRI 274 (325)
Q Consensus 219 g~~v~~~~~----~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~---~~~~~~~lgi~~~~ 274 (325)
.|.-|+..+ ....+.++++|++++++++|||.++.-=++-+| .+.+.+-+|-.+.+
T Consensus 296 TR~eFE~L~~~L~~Rt~~pv~~aL~dAgl~~~dId~VILVGGSTRIP~Vq~~V~e~FGkep~~ 358 (719)
T PRK13410 296 TRSQFEDLCGDLVSRLRRPVKRALKDAGLSPVQIDEVVLVGGSTRMPMVKQLVRSLIDREPNQ 358 (719)
T ss_pred EHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCCHHHHHHHHHHHCCCCCC
T ss_conf 599999889999999999999999983899414139999788255488999999984999788
No 222
>TIGR01090 apt adenine phosphoribosyltransferase; InterPro: IPR005764 Adenine phosphoribosyltransferase (APRTase, 2.4.2.7 from EC) is a widely distributed enzyme, and its deficiency in humans causes the accumulation of 2,8-dihydroxyadenine. It is the sole catalyst for adenine recycling in most eukaryotes. AMP + diphosphate = adenine + 5-phospho-alpha-D-ribose 1-diphosphate ; GO: 0003999 adenine phosphoribosyltransferase activity, 0006168 adenine salvage.
Probab=74.95 E-value=2.6 Score=21.91 Aligned_cols=81 Identities=17% Similarity=0.409 Sum_probs=48.9
Q ss_pred CCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC--EEEECCCCCHHHH-HHHHHCCC-----------CHHHHHHHHH-H
Q ss_conf 451454343201003678988997401200122--4630565413899-99997197-----------8657002185-4
Q gi|254780489|r 217 TNGADIFYNAVKIMAQSAKQSLRKSDLQPQDIN--RFIPHQANSRIIQ-KVCEKIGL-----------SKRIMVNSLK-D 281 (325)
Q Consensus 217 ~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did--~~i~Hq~~~~~~~-~~~~~lgi-----------~~~~~~~~l~-~ 281 (325)
.+.++.|+.++..|.+.++ +.+ + +|| +++..-+-+.+.= ++|-+||+ |.+-+...|+ |
T Consensus 25 L~~~~~f~~~id~l~~~~~----~~~--~-~id~d~iVG~EaRGFifG~~LA~~LgvGFVPVRK~GKLP~~t~~~~Y~LE 97 (175)
T TIGR01090 25 LNNPELFRFLIDLLVERYK----DAN--G-EIDADLIVGLEARGFIFGAALAYKLGVGFVPVRKPGKLPGETVSASYDLE 97 (175)
T ss_pred CCCHHHHHHHHHHHHHHHH----HCC--C-CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEECEE
T ss_conf 0687789999999999998----607--9-51513687676672577889999708980675478766842266740300
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCC-CCCEEEEEE
Q ss_conf 09330005999999999806789-998999998
Q gi|254780489|r 282 FGNSSSASIPLSLSLENQRKPFQ-KGEKILTIS 313 (325)
Q Consensus 282 ~GN~~sAsi~~~L~~~~~~g~i~-~Gd~vll~~ 313 (325)
||.= .|+ +++.-++ +|+||+++=
T Consensus 98 YG~d-------~lE--Ih~DA~~~~g~RVliVD 121 (175)
T TIGR01090 98 YGKD-------SLE--IHKDAIKIPGQRVLIVD 121 (175)
T ss_pred CCCC-------EEE--EEHHHHHCCCCEEEEEE
T ss_conf 4730-------353--41113640789089983
No 223
>PRK09275 aspartate aminotransferase; Provisional
Probab=74.53 E-value=4.5 Score=20.34 Aligned_cols=95 Identities=21% Similarity=0.203 Sum_probs=51.2
Q ss_pred EEECCCCCEEEE--ECCCC--CHHHHHHHHHHHHHHHCCCCCCCC-----CEEEEEEE-EECCCCCCCCCCCCCCCC---
Q ss_conf 311147508899--48988--799999999999864301322234-----42588431-002368874322112100---
Q gi|254780489|r 36 IEQKTGIKYRYW--AEKHE--TLTDIAIQAGDIALRNANIKKDSI-----SLTLLATS-TPDHLLPPSSPLITHRLG--- 102 (325)
Q Consensus 36 i~~~tGI~~R~~--~~~~e--~~~~la~~Aa~~aL~~a~~~~~dI-----d~ii~~s~-t~d~~~P~~a~~v~~~Lg--- 102 (325)
+-++.||.+|.. ..++. .-.++-.++..-+..+-|+++++. |-+|-+.. .||+..|-+-..|++-|.
T Consensus 77 ~p~~~Gi~~Rf~~fl~~~~~~pG~~fL~~~~~y~~~~~g~d~d~~v~El~dgiiGdnYPvP~RmL~~~E~Iv~~YL~~em 156 (531)
T PRK09275 77 MPQKEGIAERFETFLEEHKDVPGIDFLRAAISYVRDELGFDPDEFVYEMVDGIIGDNYPVPDRMLVHTEKIVKDYLRQEM 156 (531)
T ss_pred CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 75702299999999985899836899999999999886999889999999886338899967888989999999999996
Q ss_pred -CCC--CCCCCCCCCCCCCHHHHHHHHHHHHC
Q ss_conf -238--63334210123101256765788743
Q gi|254780489|r 103 -LMQ--SGAIDLTGACAGFLYALVMADSYINS 131 (325)
Q Consensus 103 -~~~--~~~~di~~~C~g~l~aL~~A~~~i~~ 131 (325)
-.. ...||+ .+--|++.|+--..+-++.
T Consensus 157 ~~~~~~~~~fdl-FatEGgTAAM~YiF~sL~~ 187 (531)
T PRK09275 157 CGNRPPPGEFDL-FAVEGGTAAMCYIFDSLKE 187 (531)
T ss_pred CCCCCCCCCCCE-EECCCCHHHHHHHHHHHHH
T ss_conf 289999887316-7416720579999999997
No 224
>TIGR00151 ispF 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; InterPro: IPR003526 This entry represents MECDP (2-C-methyl-D-erythritol 2,4-cyclodiphosphate) synthetase, an enzyme in the non-mevalonate pathway of isoprenoid synthesis, isoprenoids being essential in all organisms. Isoprenoids can also be synthesized through the mevalonate pathway. The non-mevolante route is used by many bacteria and human pathogens, including Mycobacterium tuberculosis and Plasmodium falciparum. This route appears to involve seven enzymes. MECDP synthetase catalyses the intramolecular attack by a phosphate group on a diphosphate, with cytidine monophosphate (CMP) acting as the leaving group to give the cyclic diphosphate product MEDCP. The enzyme is a trimer with three active sites shared between adjacent copies of the protein. The enzyme also has two metal binding sites, the metals playing key roles in catalysis. A number of proteins from eukaryotes and prokaryotes share this common N-terminal signature and appear to be involved in terpenoid biosynthesis. The ygbB protein is a putative enzyme of this type .; GO: 0008685 2-C-methyl-D-erythritol 24-cyclodiphosphate synthase activity, 0016114 terpenoid biosynthetic process.
Probab=74.22 E-value=4.5 Score=20.35 Aligned_cols=67 Identities=9% Similarity=0.168 Sum_probs=44.4
Q ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCC------CCHHHHHHHHHCCCCHHHHH---HHHHHCC
Q ss_conf 23224514543432010036789889974012001224630565------41389999997197865700---2185409
Q gi|254780489|r 213 YMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFIPHQA------NSRIIQKVCEKIGLSKRIMV---NSLKDFG 283 (325)
Q Consensus 213 ~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i~Hq~------~~~~~~~~~~~lgi~~~~~~---~~l~~~G 283 (325)
.++-.+++.+. +.+-+.+++.|+....||-.|.=|- =..|.+.+++-|++|.|++- .+=++.|
T Consensus 70 ~wKgaDS~~lL--------~~~~~~~~~~gy~~~N~D~tiia~~PKl~P~i~~mR~~iA~~L~i~~d~vnvKATT~EkLG 141 (159)
T TIGR00151 70 RWKGADSRVLL--------RKAVELVKEKGYRIGNVDVTIIAQRPKLAPHIEAMRENIAELLGIPLDQVNVKATTTEKLG 141 (159)
T ss_pred HHCCCCHHHHH--------HHHHHHHHHCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
T ss_conf 45688778999--------9999999855880456899997318986222689999998884687021132587676775
Q ss_pred CCCC
Q ss_conf 3300
Q gi|254780489|r 284 NSSS 287 (325)
Q Consensus 284 N~~s 287 (325)
-||-
T Consensus 142 ~~Gr 145 (159)
T TIGR00151 142 FTGR 145 (159)
T ss_pred CCCC
T ss_conf 4423
No 225
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=73.36 E-value=6.9 Score=19.14 Aligned_cols=30 Identities=17% Similarity=0.224 Sum_probs=18.5
Q ss_pred CEEEEEEEEECCCCCCCHHHHHHHHCCCHHHE
Q ss_conf 20999999735886138889998809997683
Q gi|254780489|r 5 SSCILGFGHAVPNQCIHNSIIERHLNLKLGVI 36 (325)
Q Consensus 5 ~~~I~g~g~~lP~~~i~n~~l~~~~~~~~~~i 36 (325)
+..|..+--|.|...+ +++.++++...+.|
T Consensus 8 ~~~~~~~~~y~~g~~~--~~~a~~~g~~~~~i 37 (369)
T PRK00950 8 RAIVKEIKEYVPGKSK--EEIARNYGIDPESI 37 (369)
T ss_pred HHHHHCCCCCCCCCCH--HHHHHHCCCCCCCE
T ss_conf 6886379998999999--99999809896898
No 226
>KOG1794 consensus
Probab=73.26 E-value=7.2 Score=19.03 Aligned_cols=123 Identities=16% Similarity=0.104 Sum_probs=63.4
Q ss_pred ECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCC-CCEEEEEEEEECCCCCCCCCCCCCCCCCC---CCCCCCCCC
Q ss_conf 11475088994898879999999999986430132223-44258843100236887432211210023---863334210
Q gi|254780489|r 38 QKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDS-ISLTLLATSTPDHLLPPSSPLITHRLGLM---QSGAIDLTG 113 (325)
Q Consensus 38 ~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~d-Id~ii~~s~t~d~~~P~~a~~v~~~Lg~~---~~~~~di~~ 113 (325)
+..|-.+-||.-+.+...+=-.++.++|++++|+++++ +.-|...-+-.|+ |..--.+.+.+.-+ .+..|-+.+
T Consensus 29 ~a~~~~Tnh~~ig~~~~~~rie~~i~~A~~k~g~d~~~~lr~lgL~lSg~d~--e~~~~~lv~~~R~~fps~ae~~~v~s 106 (336)
T KOG1794 29 RAVGGGTNHWLIGSTTCASRIEDMIREAKEKAGWDKKGPLRSLGLGLSGTDQ--EDKNRKLVTEFRDKFPSVAENFYVTS 106 (336)
T ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCC--HHHHHHHHHHHHHHCCCHHHEEEEEH
T ss_conf 7512654444578468999999999998866399845761014563146774--46788999999884502315046611
Q ss_pred CCCCCHHHHHHHHHHHHC--C--CCEEEEEEECCCCCCCCCCCCCC-----CCCCCCCEEEEEECCC
Q ss_conf 123101256765788743--8--85058862012244446222443-----4325442001122057
Q gi|254780489|r 114 ACAGFLYALVMADSYINS--H--QKPVLIIAANLLSRRINLEDKDT-----AIIFGDAAGAVVLAPS 171 (325)
Q Consensus 114 ~C~g~l~aL~~A~~~i~~--g--~~~vLVv~~e~~S~~~d~~d~~~-----~~lfGDgA~A~il~~~ 171 (325)
- ....+... | ..-||+-+.....+.+++.-... .-+.||+++|.-+++.
T Consensus 107 D---------a~~sl~a~t~g~~~GiVLiaGTgs~crl~~~DGs~~~~ggwg~~iGd~GSaywia~~ 164 (336)
T KOG1794 107 D---------ADGSLAAATPGGEGGIVLIAGTGSNCRLVNPDGSEKGAGGWGHMIGDGGSAYWIARQ 164 (336)
T ss_pred H---------HHHHHHHCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 5---------777875248777786799953785048888988826799887743888520011453
No 227
>TIGR02482 PFKA_ATP 6-phosphofructokinase; InterPro: IPR012828 6-phosphofructokinase (2.7.1.11 from EC) catalyses the addition of phosphate from ATP to fructose 6-phosphate to give fructose 1,6-bisphosphate. This represents a key control step in glycolysis. This entry contains bacterial ATP-dependent 6-phosphofructokinases, which lack a beta-hairpin loop present in IPR012829 from INTERPRO family members. IPR012829 from INTERPRO contains members that are ATP-dependent as well as members that are pyrophosphate-dependent. IPR011183 from INTERPRO represents the pyrophosphate-dependent phosphofructokinase, diphosphate--fructose-6-phosphate 1-phosphotransferase (2.7.1.90 from EC).; GO: 0003872 6-phosphofructokinase activity, 0005524 ATP binding, 0006002 fructose 6-phosphate metabolic process, 0006096 glycolysis.
Probab=73.11 E-value=3.4 Score=21.17 Aligned_cols=27 Identities=22% Similarity=0.205 Sum_probs=13.9
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCEEEE
Q ss_conf 101231012567657887438850588
Q gi|254780489|r 112 TGACAGFLYALVMADSYINSHQKPVLI 138 (325)
Q Consensus 112 ~~~C~g~l~aL~~A~~~i~~g~~~vLV 138 (325)
..+|+.-+.|++=.++=..||.+..+|
T Consensus 139 DTALNTi~~avdKiRDTA~SHeR~f~i 165 (302)
T TIGR02482 139 DTALNTILDAVDKIRDTATSHERAFVI 165 (302)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCEEEE
T ss_conf 667437998776542130121656899
No 228
>TIGR02446 FadI acetyl-CoA C-acyltransferase FadI; InterPro: IPR012806 This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (2.3.1.16 from EC) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (IPR012802 from INTERPRO). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in Escherichia coli.; GO: 0008415 acyltransferase activity, 0016740 transferase activity, 0006631 fatty acid metabolic process, 0016042 lipid catabolic process.
Probab=73.09 E-value=3.9 Score=20.74 Aligned_cols=88 Identities=17% Similarity=0.109 Sum_probs=59.9
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 887999999999998643013222344258843100236887432211210023-8633342101231012567657887
Q gi|254780489|r 51 HETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADSYI 129 (325)
Q Consensus 51 ~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~~i 129 (325)
.-...||+.-...++|.+..++|+=|..++|+.+..--..|..|..|.---|+. +.-+|.+.-+|+...++...+..-+
T Consensus 28 ~~~a~dlGkmvv~~ll~r~~~~~~~ieq~v~GqvvqmP~aPniareivlGtGm~~~tdaysv~raCatsfq~~~nvaes~ 107 (430)
T TIGR02446 28 GIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVTRACATSFQSAVNVAESI 107 (430)
T ss_pred CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEECCCCCCHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 56413445788987775216777897776610013157764023342102673000120244567777788899888777
Q ss_pred HCCCCEEEE
Q ss_conf 438850588
Q gi|254780489|r 130 NSHQKPVLI 138 (325)
Q Consensus 130 ~~g~~~vLV 138 (325)
-+|.-.+-+
T Consensus 108 m~G~i~~Gi 116 (430)
T TIGR02446 108 MAGAIEIGI 116 (430)
T ss_pred HHCCEEEEE
T ss_conf 515301311
No 229
>PRK07409 threonine synthase; Validated
Probab=72.51 E-value=5.9 Score=19.57 Aligned_cols=35 Identities=17% Similarity=0.188 Sum_probs=28.8
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
Q ss_conf 30005999999999806789998999998615510
Q gi|254780489|r 285 SSSASIPLSLSLENQRKPFQKGEKILTISCRRGND 319 (325)
Q Consensus 285 ~~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~G~s 319 (325)
.+|+.-.-++-++.++|++.||++|+++-.|.|+-
T Consensus 289 pssaaa~Aa~~kl~~~g~i~~~~~VV~iltg~GlK 323 (350)
T PRK07409 289 PASAASVAGLLKAKEQGKVPKGSTVVCTLTGNGLK 323 (350)
T ss_pred CCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
T ss_conf 20899999999999759999999699995889886
No 230
>TIGR02470 sucr_synth sucrose synthase; InterPro: IPR012820 This entry represents sucrose synthase an enzyme that despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyses the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.; GO: 0016157 sucrose synthase activity.
Probab=72.30 E-value=1.6 Score=23.35 Aligned_cols=95 Identities=24% Similarity=0.320 Sum_probs=67.0
Q ss_pred CEEEEEEEEECCCCC--CCHHHHHHHHCCCHHHEEEC-----CCCCEEEEECCCC---CHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 209999997358861--38889998809997683111-----4750889948988---7999999999998643013222
Q gi|254780489|r 5 SSCILGFGHAVPNQC--IHNSIIERHLNLKLGVIEQK-----TGIKYRYWAEKHE---TLTDIAIQAGDIALRNANIKKD 74 (325)
Q Consensus 5 ~~~I~g~g~~lP~~~--i~n~~l~~~~~~~~~~i~~~-----tGI~~R~~~~~~e---~~~~la~~Aa~~aL~~a~~~~~ 74 (325)
+-+|+=+=.-+|+-. -.|+.||+..|+...||.|- .|+-.|.|...=| ....-|..|++++++.-+-.|+
T Consensus 314 ~PkIlIvTRLiPdA~GT~CnqRLEKv~Gt~~~~ILRVPFr~~nG~~~~~WISRFeiWPYLE~FA~D~~~e~~~el~g~PD 393 (790)
T TIGR02470 314 TPKILIVTRLIPDAEGTTCNQRLEKVSGTEHAHILRVPFRTENGIILRKWISRFEIWPYLETFAEDAEKEILAELQGKPD 393 (790)
T ss_pred CCEEEEEECCCCCCCCCCCCCEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf 55289985017689886057245201279853164216643477300366330124720456689999999998468997
Q ss_pred CCCEEEEEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 34425884310023688743221121002386
Q gi|254780489|r 75 SISLTLLATSTPDHLLPPSSPLITHRLGLMQS 106 (325)
Q Consensus 75 dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~~~ 106 (325)
||| +..+-..+ .|++++++||.++|
T Consensus 394 ---LII-GNYSDGNL---VA~LLA~kLgVTQC 418 (790)
T TIGR02470 394 ---LII-GNYSDGNL---VASLLARKLGVTQC 418 (790)
T ss_pred ---EEE-ECCCCHHH---HHHHHHHHCCCCCC
T ss_conf ---067-32563589---99999853362222
No 231
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=71.35 E-value=7.9 Score=18.75 Aligned_cols=85 Identities=20% Similarity=0.239 Sum_probs=36.2
Q ss_pred CCCCHHHH---HHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC--CC----CCCCCC--------
Q ss_conf 98879999---99999998643013222344258843100236887432211210023--86----333421--------
Q gi|254780489|r 50 KHETLTDI---AIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLM--QS----GAIDLT-------- 112 (325)
Q Consensus 50 ~~e~~~~l---a~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~--~~----~~~di~-------- 112 (325)
+.++..++ ...+..+.|++ ..|+ +|++..-|--.+. ++.++..+.++ +. .++|..
T Consensus 69 ~~~tl~~~t~~~i~~~~~vl~~--~kPD---~VlVhGDT~t~lA---~alaa~~~~IpV~HvEAGlRt~~~~~PEE~NR~ 140 (383)
T COG0381 69 PGQTLGEITGNIIEGLSKVLEE--EKPD---LVLVHGDTNTTLA---GALAAFYLKIPVGHVEAGLRTGDLYFPEEINRR 140 (383)
T ss_pred CCCCHHHHHHHHHHHHHHHHHH--HCCC---EEEEECCCCHHHH---HHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHH
T ss_conf 6888899999999999999986--2999---8999178536889---999999868936887425444787783798787
Q ss_pred --CCCCCCHH-HHHHH-HHHHHCCC--CEEEEEEEC
Q ss_conf --01231012-56765-78874388--505886201
Q gi|254780489|r 113 --GACAGFLY-ALVMA-DSYINSHQ--KPVLIIAAN 142 (325)
Q Consensus 113 --~~C~g~l~-aL~~A-~~~i~~g~--~~vLVv~~e 142 (325)
..++-.-. .-.+| .++++.|. +++.|++.-
T Consensus 141 l~~~~S~~hfapte~ar~nLl~EG~~~~~IfvtGnt 176 (383)
T COG0381 141 LTSHLSDLHFAPTEIARKNLLREGVPEKRIFVTGNT 176 (383)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCH
T ss_conf 887765230377199999999769995516885973
No 232
>PRK06260 threonine synthase; Validated
Probab=70.88 E-value=6.2 Score=19.44 Aligned_cols=61 Identities=18% Similarity=0.159 Sum_probs=40.2
Q ss_pred HHHHHHHHHCC----CCHHHHHH---HHH-HCCC---CCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
Q ss_conf 38999999719----78657002---185-4093---30005999999999806789998999998615510
Q gi|254780489|r 259 RIIQKVCEKIG----LSKRIMVN---SLK-DFGN---SSSASIPLSLSLENQRKPFQKGEKILTISCRRGND 319 (325)
Q Consensus 259 ~~~~~~~~~lg----i~~~~~~~---~l~-~~GN---~~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~G~s 319 (325)
..++.+.+.-| ++.+.+.. .+. +-|- ..+|...-.|.++.++|.|+++++|++.-.|.|+-
T Consensus 301 ~~l~al~~s~G~~v~VtD~ei~~A~~~La~~eGi~vEpasA~alAgl~kl~e~G~i~~~~~VV~~lTG~GlK 372 (400)
T PRK06260 301 KALRAIRESGGTAESVSDEEILAAQRLLARKEGIGVEPASAASVAGLIKLVEMGVIDKDEKVVCVTTGHLLK 372 (400)
T ss_pred HHHHHHHHHCCEEEEECHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC
T ss_conf 999999983998999889999999999997489067836899999999999739999999799990788768
No 233
>PRK06721 threonine synthase; Reviewed
Probab=70.84 E-value=6.7 Score=19.23 Aligned_cols=34 Identities=18% Similarity=0.210 Sum_probs=28.0
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
Q ss_conf 0005999999999806789998999998615510
Q gi|254780489|r 286 SSASIPLSLSLENQRKPFQKGEKILTISCRRGND 319 (325)
Q Consensus 286 ~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~G~s 319 (325)
++|.-.-++-++.++|.++||++|+++-.|.|+-
T Consensus 286 ssa~alAallkl~~~g~i~~g~~VV~iltg~GlK 319 (352)
T PRK06721 286 GSNASLAGVMKHVQSGKIKKGETVVAVLTGNGLK 319 (352)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC
T ss_conf 8899999999999839989879899995899877
No 234
>pfam01295 Adenylate_cycl Adenylate cyclase, class-I.
Probab=69.80 E-value=8.5 Score=18.53 Aligned_cols=15 Identities=13% Similarity=0.160 Sum_probs=8.5
Q ss_pred HHHHHHHCCCHHHEE
Q ss_conf 899988099976831
Q gi|254780489|r 23 SIIERHLNLKLGVIE 37 (325)
Q Consensus 23 ~~l~~~~~~~~~~i~ 37 (325)
+.+.+.++|+.+.|.
T Consensus 358 ~~Lv~~W~Ws~~~l~ 372 (830)
T pfam01295 358 SELVNQWNWSEELLQ 372 (830)
T ss_pred HHHHHHCCCCHHHHH
T ss_conf 999986599989998
No 235
>PRK06352 threonine synthase; Validated
Probab=69.54 E-value=7.3 Score=18.98 Aligned_cols=35 Identities=17% Similarity=0.201 Sum_probs=28.7
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
Q ss_conf 30005999999999806789998999998615510
Q gi|254780489|r 285 SSSASIPLSLSLENQRKPFQKGEKILTISCRRGND 319 (325)
Q Consensus 285 ~~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~G~s 319 (325)
.+||...-+|-++.++|.++||++|+++-.|.|+-
T Consensus 285 pssa~alAallkl~~~G~l~~g~~VV~vltg~GlK 319 (351)
T PRK06352 285 PGSAASLAGVIQHVANGTIKKGETVVCVFTGNGLK 319 (351)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
T ss_conf 77899999999999749999859899995889986
No 236
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=69.13 E-value=5.8 Score=19.61 Aligned_cols=49 Identities=12% Similarity=0.202 Sum_probs=34.5
Q ss_pred CHHHHHHHHHHHHCCCCCCCCEEEECC---------CCCHHHHHHHHHCCCCHHHHHHH
Q ss_conf 003678988997401200122463056---------54138999999719786570021
Q gi|254780489|r 229 IMAQSAKQSLRKSDLQPQDINRFIPHQ---------ANSRIIQKVCEKIGLSKRIMVNS 278 (325)
Q Consensus 229 ~~~~~i~~~l~~~gl~~~did~~i~Hq---------~~~~~~~~~~~~lgi~~~~~~~~ 278 (325)
.+...+.+.|.+.|...++| +++||. ++..|+...++.++++.++.+.+
T Consensus 69 ~i~~~m~~~l~~~g~~id~i-y~CPh~p~~~c~cRKP~pGMl~~a~~~~~id~~~s~mI 126 (181)
T PRK08942 69 ALHEKMDWSLADRGGDLDGI-YYCPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMV 126 (181)
T ss_pred HHHHHHHHHHHHCCCCEEEE-EECCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHCEEE
T ss_conf 99999999999769943137-87689971447788998499999999809884218476
No 237
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=68.66 E-value=3.1 Score=21.45 Aligned_cols=56 Identities=13% Similarity=0.220 Sum_probs=36.4
Q ss_pred CHHHHHHHCC----CHHHHHHHHHHHHCCCCCCCCEEEECCCCCHH---HHHHHHHCCCCHHH
Q ss_conf 1454343201----00367898899740120012246305654138---99999971978657
Q gi|254780489|r 219 GADIFYNAVK----IMAQSAKQSLRKSDLQPQDINRFIPHQANSRI---IQKVCEKIGLSKRI 274 (325)
Q Consensus 219 g~~v~~~~~~----~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~---~~~~~~~lgi~~~~ 274 (325)
.|+-|+..+. .....++++|++++++++|||.++.-=++-+| .+.+.+.+|-++.+
T Consensus 301 tR~~FE~l~~~L~~rt~~~v~~aL~dA~l~~~dId~ViLVGGSTRiP~Vq~~v~~~Fgk~~~~ 363 (621)
T PRK05183 301 TREQFEALIAPLVKRTLLACRRALRDAGVEADEVLEVVMVGGSTRVPLVREAVGEFFGRTPLT 363 (621)
T ss_pred EHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEEEECCCCCCHHHHHHHHHHHCCCCCC
T ss_conf 499999999999999999999999871368300209999288545668999999985989666
No 238
>pfam02887 PK_C Pyruvate kinase, alpha/beta domain. As well as being found in pyruvate kinase this family is found as an isolated domain in some bacterial proteins.
Probab=68.11 E-value=7.5 Score=18.91 Aligned_cols=27 Identities=15% Similarity=0.240 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHCCCCCCCEEEEEEECC
Q ss_conf 999999999806789998999998615
Q gi|254780489|r 290 IPLSLSLENQRKPFQKGEKILTISCRR 316 (325)
Q Consensus 290 i~~~L~~~~~~g~i~~Gd~vll~~~G~ 316 (325)
+-.++..+.++|.+++||+|++++--+
T Consensus 77 i~~a~~~l~~~g~~~~GD~vVvv~G~p 103 (117)
T pfam02887 77 IAEALRVAKDAGLIKKGDLVVVTAGVP 103 (117)
T ss_pred HHHHHHHHHHCCCCCCCCEEEEEECCC
T ss_conf 999999999869999999899984635
No 239
>PRK03910 D-cysteine desulfhydrase; Validated
Probab=67.54 E-value=9.5 Score=18.23 Aligned_cols=46 Identities=15% Similarity=0.138 Sum_probs=32.0
Q ss_pred HHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECC
Q ss_conf 99999971978657002185409330005999999999806789998999998615
Q gi|254780489|r 261 IQKVCEKIGLSKRIMVNSLKDFGNSSSASIPLSLSLENQRKPFQKGEKILTISCRR 316 (325)
Q Consensus 261 ~~~~~~~lgi~~~~~~~~l~~~GN~~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~ 316 (325)
++.+++.-||+.|.++ ++-.+..|.+++++|.+.+|++|+++=.|.
T Consensus 273 i~~la~~eGI~ldPvY----------TgKa~~gl~~li~~g~i~~g~~Vv~ihTGG 318 (331)
T PRK03910 273 IKLLARLEGILLDPVY----------TGKAMAGLIDLIRKGRFKDGGNVLFIHTGG 318 (331)
T ss_pred HHHHHHHHCCCCCHHH----------HHHHHHHHHHHHHCCCCCCCCEEEEEECCC
T ss_conf 9999997593025326----------799999999999849989989299998996
No 240
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=67.34 E-value=4.5 Score=20.32 Aligned_cols=32 Identities=16% Similarity=0.224 Sum_probs=17.3
Q ss_pred CCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCHHH
Q ss_conf 68874322112100238-6333421012310125
Q gi|254780489|r 89 LLPPSSPLITHRLGLMQ-SGAIDLTGACAGFLYA 121 (325)
Q Consensus 89 ~~P~~a~~v~~~Lg~~~-~~~~di~~~C~g~l~a 121 (325)
..|.+.+++.+.|.++. ...++|-.|| |+..|
T Consensus 56 s~P~~vA~m~~~L~~~~g~~VLEIGtGs-GY~aA 88 (209)
T COG2518 56 SAPHMVARMLQLLELKPGDRVLEIGTGS-GYQAA 88 (209)
T ss_pred CCCHHHHHHHHHHCCCCCCEEEEECCCC-HHHHH
T ss_conf 5747999999974899998688877783-09999
No 241
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=66.93 E-value=2.7 Score=21.78 Aligned_cols=43 Identities=14% Similarity=0.234 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEECCCCCHH---HHHHHHHCCCCHH
Q ss_conf 367898899740120012246305654138---9999997197865
Q gi|254780489|r 231 AQSAKQSLRKSDLQPQDINRFIPHQANSRI---IQKVCEKIGLSKR 273 (325)
Q Consensus 231 ~~~i~~~l~~~gl~~~did~~i~Hq~~~~~---~~~~~~~lgi~~~ 273 (325)
...++++|++++++++|||.++.-=++-+| .+.+.+.+|-++.
T Consensus 337 ~~~v~~aL~dAgl~~~dId~VILVGGSTRIP~Vq~~l~~~Fgkep~ 382 (657)
T PTZ00186 337 IAPCKQCMKDAGVELKEINDVVLVGGMTRMPKVVEEVKKFFQKDPF 382 (657)
T ss_pred HHHHHHHHHHHCCCHHHEEEEEEECCCCCCHHHHHHHHHHHCCCCC
T ss_conf 9999999998189987800899957841547999999998589977
No 242
>PRK00055 ribonuclease Z; Reviewed
Probab=66.70 E-value=9.8 Score=18.12 Aligned_cols=68 Identities=19% Similarity=0.246 Sum_probs=43.5
Q ss_pred CCCCCEEEEEEEEECCCCCCCHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf 96662099999973588613888999880999768311147508899489887999999999998643013222344258
Q gi|254780489|r 1 MIKSSSCILGFGHAVPNQCIHNSIIERHLNLKLGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTL 80 (325)
Q Consensus 1 M~~~~~~I~g~g~~lP~~~i~n~~l~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii 80 (325)
|| ++.++|+|..+|.... . ....+.+ ++ .++.+.+.++.. ..-|.+.++++.+||.|+
T Consensus 1 mm--kit~LGtg~~~p~~~R--------~--~s~~li~-~~-~~~iliD~G~G~--------~~~l~~~~~~~~~l~~I~ 58 (259)
T PRK00055 1 MM--ELTFLGTGSGVPTPTR--------N--VSSILLR-LG-GELWLFDCGEGT--------QRQMLRAGIGPRKIDRIF 58 (259)
T ss_pred CC--EEEEEECCCCCCCCCC--------C--CCEEEEE-EC-CEEEEEECCCHH--------HHHHHHCCCCHHHCCEEE
T ss_conf 94--8999906899889999--------6--4889999-99-908999588159--------999998199955765899
Q ss_pred EEEEEECCCC
Q ss_conf 8431002368
Q gi|254780489|r 81 LATSTPDHLL 90 (325)
Q Consensus 81 ~~s~t~d~~~ 90 (325)
..+.-.|+..
T Consensus 59 iTH~H~DH~~ 68 (259)
T PRK00055 59 ITHLHGDHIF 68 (259)
T ss_pred EECCCHHHHC
T ss_conf 9643357665
No 243
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=66.05 E-value=5 Score=20.06 Aligned_cols=35 Identities=20% Similarity=0.142 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCC
Q ss_conf 9999999998643013222344258843100236887
Q gi|254780489|r 56 DIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPP 92 (325)
Q Consensus 56 ~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~ 92 (325)
+-.....++||++|+++++|||+|-+ |..| -+.|+
T Consensus 52 e~i~~li~~al~eA~~~~~dID~IA~-T~gP-GL~ga 86 (342)
T COG0533 52 ENIPPLIEEALAEAGVSLEDIDAIAV-TAGP-GLGGA 86 (342)
T ss_pred HHHHHHHHHHHHHCCCCHHCCCEEEE-ECCC-CCHHH
T ss_conf 98999999999984998301888998-1699-94477
No 244
>TIGR02350 prok_dnaK chaperone protein DnaK; InterPro: IPR012725 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolysing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. In prokaryotes, the grpE protein is a co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold . DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for the Mycoplasma sequence) found clustered with other genes of this systems. This entry excludes DnaK homologues that are not DnaK itself, such as the heat shock cognate protein HscA (IPR010236 from INTERPRO). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of DnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; the lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.; GO: 0005524 ATP binding, 0051082 unfolded protein binding, 0006457 protein folding.
Probab=65.87 E-value=3 Score=21.54 Aligned_cols=43 Identities=23% Similarity=0.347 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHCCCCCCCCCEEEE-EEEEECCCCCCCCCCCCCCCCC
Q ss_conf 999999986430132223442588-4310023688743221121002
Q gi|254780489|r 58 AIQAGDIALRNANIKKDSISLTLL-ATSTPDHLLPPSSPLITHRLGL 103 (325)
Q Consensus 58 a~~Aa~~aL~~a~~~~~dId~ii~-~s~t~d~~~P~~a~~v~~~Lg~ 103 (325)
..+-.++||.+|+++++|||-||. +..|+ +|..-..|.+-+|-
T Consensus 308 ~~~p~~~aL~DA~l~~~~I~~v~LVGG~TR---iP~V~~~V~~~~GK 351 (598)
T TIGR02350 308 TKEPVRQALKDAGLSASDIDEVILVGGSTR---IPAVQELVKEFFGK 351 (598)
T ss_pred HHHHHHHHHHHCCCCHHHCCEEEEECCCCC---HHHHHHHHHHHHCC
T ss_conf 899999999753788436666898558841---24899999987298
No 245
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=64.80 E-value=8.1 Score=18.69 Aligned_cols=47 Identities=11% Similarity=0.140 Sum_probs=21.8
Q ss_pred EEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECC
Q ss_conf 31114750889948988799999999999864301322234425884310023
Q gi|254780489|r 36 IEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDH 88 (325)
Q Consensus 36 i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~ 88 (325)
|..+.||..-++..+ ..+---.-..+.|++.|+ .||-+.+|--.|+.
T Consensus 52 VTNQsGIgrG~~t~e---d~~~ih~~m~~~L~~~Gi---~id~Iy~CPH~p~d 98 (354)
T PRK05446 52 VTNQDGLGTDSFPQE---DFDGPHNLMMQIFESQGI---KFDDVLICPHFPED 98 (354)
T ss_pred EECCCCCCCCCCCHH---HHHHHHHHHHHHHHHCCC---CCCEEEECCCCCCC
T ss_conf 948851147988999---999999999999997797---34759988998857
No 246
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase; InterPro: IPR012793 Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.; GO: 0016747 transferase activity transferring groups other than amino-acyl groups, 0019619 protocatechuate catabolic process.
Probab=64.74 E-value=4.5 Score=20.33 Aligned_cols=94 Identities=17% Similarity=0.170 Sum_probs=59.9
Q ss_pred CHHHHHHHHHHHHHHHC-CCCCCCCCEEEEEEEEECCCCCCCCCCCCCCC-CCCC-CCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 79999999999986430-13222344258843100236887432211210-0238-633342101231012567657887
Q gi|254780489|r 53 TLTDIAIQAGDIALRNA-NIKKDSISLTLLATSTPDHLLPPSSPLITHRL-GLMQ-SGAIDLTGACAGFLYALVMADSYI 129 (325)
Q Consensus 53 ~~~~la~~Aa~~aL~~a-~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~L-g~~~-~~~~di~~~C~g~l~aL~~A~~~i 129 (325)
...||+.--.+..+++. .++...||-|++++...---.--..++...-| |++. ++...++--|.+.+.++..+..-+
T Consensus 24 rad~l~a~P~~~l~~~~~~~~~~~~d~v~~G~anqaGednrnvarm~~llaGlP~~v~~~t~nrlC~s~lda~~~~~ra~ 103 (400)
T TIGR02430 24 RADDLAAVPIKALLARNPSLDAAAIDDVILGCANQAGEDNRNVARMAALLAGLPVSVPGTTVNRLCGSGLDAIGLAARAI 103 (400)
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 10002233699998532202656531443123211351035799999997068641101456665421378999988876
Q ss_pred HCCCCEEEEEEE-CCCCC
Q ss_conf 438850588620-12244
Q gi|254780489|r 130 NSHQKPVLIIAA-NLLSR 146 (325)
Q Consensus 130 ~~g~~~vLVv~~-e~~S~ 146 (325)
++|....+|.++ |.+|+
T Consensus 104 ~~G~~~l~iaGGvesmsr 121 (400)
T TIGR02430 104 KAGEADLVIAGGVESMSR 121 (400)
T ss_pred HCCCCCEEEECCCHHHCC
T ss_conf 327643577647211203
No 247
>cd01451 vWA_Magnesium_chelatase Magnesium chelatase: Mg-chelatase catalyses the insertion of Mg into protoporphyrin IX (Proto). In chlorophyll biosynthesis, insertion of Mg2+ into protoporphyrin IX is catalysed by magnesium chelatase in an ATP-dependent reaction. Magnesium chelatase is a three sub-unit (BchI, BchD and BchH) enzyme with a novel arrangement of domains: the C-terminal helical domain is located behind the nucleotide binding site. The BchD domain contains a AAA domain at its N-terminus and a VWA domain at its C-terminus. The VWA domain has been speculated to be involved in mediating protein-protein interactions.
Probab=64.23 E-value=11 Score=17.82 Aligned_cols=87 Identities=21% Similarity=0.293 Sum_probs=48.7
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
Q ss_conf 87999999999998643013222344258843100236887432211210023863334210123101256765788743
Q gi|254780489|r 52 ETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYINS 131 (325)
Q Consensus 52 e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~ 131 (325)
+...+.+-.|+...|.++-..-+.|.+|.|.....+...|++-..-.-+-.+.... ..|++..-.||..|..+++.
T Consensus 16 ~~rl~~aK~a~~~ll~d~~~~~D~v~lv~F~g~~a~~~lppT~~~~~~~~~l~~L~----~gG~T~l~~gL~~a~~~~~~ 91 (178)
T cd01451 16 RHRMAAAKGAVLSLLRDAYQRRDKVALIAFRGTEAEVLLPPTRSVELAKRRLARLP----TGGGTPLAAGLLAAYELAAE 91 (178)
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEECCCCCCHHHHHHHHHCCC----CCCCCCHHHHHHHHHHHHHH
T ss_conf 56799999999999997434678899999759755585688765799999872167----88985199999999999998
Q ss_pred C-----CCEEEEEEEC
Q ss_conf 8-----8505886201
Q gi|254780489|r 132 H-----QKPVLIIAAN 142 (325)
Q Consensus 132 g-----~~~vLVv~~e 142 (325)
. ..+++|+-+|
T Consensus 92 ~~~~~~~~~~iiLlTD 107 (178)
T cd01451 92 QARDPGQRPLIVVITD 107 (178)
T ss_pred HCCCCCCCEEEEEECC
T ss_conf 5027898439999846
No 248
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=63.93 E-value=11 Score=17.78 Aligned_cols=24 Identities=25% Similarity=0.351 Sum_probs=17.4
Q ss_pred EEEEEEEEECCCCCCCHHHHHHHHCC
Q ss_conf 09999997358861388899988099
Q gi|254780489|r 6 SCILGFGHAVPNQCIHNSIIERHLNL 31 (325)
Q Consensus 6 ~~I~g~g~~lP~~~i~n~~l~~~~~~ 31 (325)
-.|.++.-|.|...+ +++++++|.
T Consensus 8 p~i~~~~~y~~g~~~--~~~~~~~g~ 31 (367)
T PRK02731 8 PGILDIAPYVPGKPI--EELVREYGI 31 (367)
T ss_pred CCCCCCCCCCCCCCH--HHHHHHCCC
T ss_conf 212048998999998--999986098
No 249
>pfam01968 Hydantoinase_A Hydantoinase/oxoprolinase. This family includes the enzymes hydantoinase and oxoprolinase EC:3.5.2.9. Both reactions involve the hydrolysis of 5-membered rings via hydrolysis of their internal imide bonds.
Probab=63.39 E-value=11 Score=17.72 Aligned_cols=53 Identities=19% Similarity=0.255 Sum_probs=41.1
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCH
Q ss_conf 45434320100367898899740120012246305654138999999719786
Q gi|254780489|r 220 ADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSK 272 (325)
Q Consensus 220 ~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~ 272 (325)
+.+.+.+...|.+.+++...+.|+++.|+..+.+--++..+...++++||++.
T Consensus 209 ~~ii~~~~~~m~~ai~~~~~~~g~dp~~~~lv~~GGag~~~~~~la~~lg~~~ 261 (285)
T pfam01968 209 EGILRIANETMADAVRLLSVERGLDPRDFPLVVFGGAGPLHAPELAEELGIKE 261 (285)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCE
T ss_conf 99999999999999999999849997787899987829999999999859998
No 250
>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=62.79 E-value=4.9 Score=20.13 Aligned_cols=42 Identities=17% Similarity=0.306 Sum_probs=32.7
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE-EEECCCCCC
Q ss_conf 887999999999998643013222344258843-100236887
Q gi|254780489|r 51 HETLTDIAIQAGDIALRNANIKKDSISLTLLAT-STPDHLLPP 92 (325)
Q Consensus 51 ~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s-~t~d~~~P~ 92 (325)
.|+.++|--....+++++|+++.+|+|.|+-+| ++..+..|-
T Consensus 62 resV~elV~dtl~e~~k~A~l~i~DL~FVVRSTGV~Agf~spe 104 (445)
T TIGR03285 62 RESVAELVKDTLKESLKKAGLDIDDLDFVVRSTGVTAGFASPE 104 (445)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHCCEEEEECCEEECCCCHH
T ss_conf 8899999999999999973998022557995064430568979
No 251
>COG3072 CyaA Adenylate cyclase [Nucleotide transport and metabolism]
Probab=62.73 E-value=7.7 Score=18.84 Aligned_cols=36 Identities=22% Similarity=0.280 Sum_probs=18.0
Q ss_pred CCHHHHHHHHHHH---HCCCCCCCCEEEECCCCCHHHHH
Q ss_conf 1003678988997---40120012246305654138999
Q gi|254780489|r 228 KIMAQSAKQSLRK---SDLQPQDINRFIPHQANSRIIQK 263 (325)
Q Consensus 228 ~~~~~~i~~~l~~---~gl~~~did~~i~Hq~~~~~~~~ 263 (325)
..|+++.+.++.+ -.-.|+.|+.|+..|--+..++.
T Consensus 618 qA~leaLk~~l~k~h~ga~pP~sv~Vfcys~~~r~~ir~ 656 (853)
T COG3072 618 QAMLEALKTILGKMHQGAPPPDSVQVFCYSQHLRGLIRT 656 (853)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHH
T ss_conf 689999999988873689999516777537778999999
No 252
>PRK09605 O-sialoglycoprotein endopeptidase/protein kinase; Reviewed
Probab=62.70 E-value=9.4 Score=18.25 Aligned_cols=79 Identities=22% Similarity=0.261 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCC--CCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHCCC
Q ss_conf 9999999986430132223442588431002368874--32211210023-86333421012310125676578874388
Q gi|254780489|r 57 IAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPS--SPLITHRLGLM-QSGAIDLTGACAGFLYALVMADSYINSHQ 133 (325)
Q Consensus 57 la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~--a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~~i~~g~ 133 (325)
-...-.++||++|+++++|||.|-+ |.-| -+.|+. ....++.|-.. +.+-..||. |-|= +....+.++.
T Consensus 52 ~i~~vv~~aL~~A~i~~~dIdaIA~-T~GP-GL~g~L~VG~~~Ak~La~~~~~PligVnH-~~gH-----i~~~rl~~~~ 123 (536)
T PRK09605 52 AIPKVIKEALEEAGIKKGDIDLVAF-SQGP-GLGPCLRVVATAARALALSLDVPLIGVNH-CIAH-----VEIGRLTTGA 123 (536)
T ss_pred HHHHHHHHHHHHCCCCHHHCCEEEE-CCCC-CCHHHHHHHHHHHHHHHHHHCCCEEECCH-HHHH-----HHHHHHCCCC
T ss_conf 9999999999984999888989999-0699-81786899999999999984998500340-8988-----7442310698
Q ss_pred -CE-EEEEEECC
Q ss_conf -50-58862012
Q gi|254780489|r 134 -KP-VLIIAANL 143 (325)
Q Consensus 134 -~~-vLVv~~e~ 143 (325)
.+ +|+|++-.
T Consensus 124 ~~Pl~L~VSGGh 135 (536)
T PRK09605 124 RDPVTLYVSGGN 135 (536)
T ss_pred CCCCEEEEECCC
T ss_conf 788569997686
No 253
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family; InterPro: IPR014189 Members of this family are putative quinone oxidoreductases that belong to the broader superfamily of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxidoreductases. An alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, consequently members of this entry are likely to be quinone oxidoreductases. A member of this family in Homo sapiens (Human), PIG3, is induced by p53 but is otherwise uncharacterised..
Probab=61.94 E-value=6.6 Score=19.24 Aligned_cols=38 Identities=5% Similarity=0.152 Sum_probs=25.8
Q ss_pred HHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 998643013222344258843100236887432211210023
Q gi|254780489|r 63 DIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLM 104 (325)
Q Consensus 63 ~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~ 104 (325)
-++++.+++.+-+- +||.+.++. .-++|.++++.+|++
T Consensus 134 ~NLF~~g~L~~GEt-vLiHGGaSG---IGttAIqLAKA~Ga~ 171 (334)
T TIGR02824 134 SNLFQRGGLKAGET-VLIHGGASG---IGTTAIQLAKAFGAR 171 (334)
T ss_pred HHHHHHCCCCCCCE-EEEEECCCC---HHHHHHHHHHHCCCE
T ss_conf 86872211378972-899713673---679999999856975
No 254
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=61.05 E-value=12 Score=17.46 Aligned_cols=57 Identities=19% Similarity=0.212 Sum_probs=37.2
Q ss_pred CHHHHHHHC----CCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHH---HHHHHHHCCCCHHHH
Q ss_conf 145434320----100367898899740120012246305654138---999999719786570
Q gi|254780489|r 219 GADIFYNAV----KIMAQSAKQSLRKSDLQPQDINRFIPHQANSRI---IQKVCEKIGLSKRIM 275 (325)
Q Consensus 219 g~~v~~~~~----~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~---~~~~~~~lgi~~~~~ 275 (325)
.|.-|+..+ ......++++|++++++++|||.+++-=++-+| .+.+.+.+|-++.+.
T Consensus 296 TR~~FE~l~~~l~~r~~~~v~~aL~~A~l~~~dId~ViLVGGsTRiP~Vq~~v~~~Fgk~~~~~ 359 (631)
T PRK00290 296 TRAKFEELTEDLVERTIEPCRQALKDAGLSVSDIDEVILVGGSTRMPAVQELVKEFFGKEPNKG 359 (631)
T ss_pred EHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCCHHHHHHHHHHHCCCCCCC
T ss_conf 8999999899999999999999999808982221599991782456799999999968897779
No 255
>TIGR00289 TIGR00289 conserved hypothetical protein TIGR00289; InterPro: IPR005237 This family of conserved hypothetical proteins has no known function. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs in the family, the much longer protein YLR143W from Saccharomyces cerevisiae (Baker's yeast), and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group..
Probab=60.60 E-value=6.5 Score=19.31 Aligned_cols=31 Identities=10% Similarity=0.172 Sum_probs=15.5
Q ss_pred CCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 23442588431002368874322112100238
Q gi|254780489|r 74 DSISLTLLATSTPDHLLPPSSPLITHRLGLMQ 105 (325)
Q Consensus 74 ~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~~ 105 (325)
.-+|.|+.+...-.|+= +=--.||++||++-
T Consensus 88 rGvea~~~Ga~~S~YQK-~Rid~vCrelGlks 118 (227)
T TIGR00289 88 RGVEAVVIGAIESEYQK-SRIDKVCRELGLKS 118 (227)
T ss_pred CCCCEEEECCEECCHHH-HHHHHHHHHHCCHH
T ss_conf 05454788534101123-35778877714100
No 256
>CHL00094 dnaK heat shock protein 70
Probab=59.78 E-value=12 Score=17.52 Aligned_cols=57 Identities=16% Similarity=0.194 Sum_probs=36.6
Q ss_pred CHHHHHHHC----CCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHH---HHHHHHHCCCCHHHH
Q ss_conf 145434320----100367898899740120012246305654138---999999719786570
Q gi|254780489|r 219 GADIFYNAV----KIMAQSAKQSLRKSDLQPQDINRFIPHQANSRI---IQKVCEKIGLSKRIM 275 (325)
Q Consensus 219 g~~v~~~~~----~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~---~~~~~~~lgi~~~~~ 275 (325)
.|.-|+..+ ....+.++++|++++++++|||.+++-=++-+| .+.+.+.+|.++.+.
T Consensus 296 tR~~FE~l~~~l~~r~~~~v~~~L~~a~l~~~dId~ViLVGGstRiP~V~~~l~~~fgk~~~~~ 359 (622)
T CHL00094 296 TRAKFEELCSDLIDRCRIPVENALKDAKLDKSDIDEVVLVGGSTRIPAIQELVKSLLGKDPNQS 359 (622)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCEEEEEECCCCCCHHHHHHHHHHHCCCCCCC
T ss_conf 3999998999999999999999999819998894399993881256789999999858996779
No 257
>COG3894 Uncharacterized metal-binding protein [General function prediction only]
Probab=58.46 E-value=8.9 Score=18.42 Aligned_cols=65 Identities=25% Similarity=0.273 Sum_probs=43.2
Q ss_pred CHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHH-HHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHH
Q ss_conf 0036789889974012001224630565413899-99997197865700218540933000599999
Q gi|254780489|r 229 IMAQSAKQSLRKSDLQPQDINRFIPHQANSRIIQ-KVCEKIGLSKRIMVNSLKDFGNSSSASIPLSL 294 (325)
Q Consensus 229 ~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~-~~~~~lgi~~~~~~~~l~~~GN~~sAsi~~~L 294 (325)
.+..-...+++++|+.++|++.+-+--+....++ .-+..+|+=++-.. .+..+|||+-|--..+|
T Consensus 475 AirAG~~tL~~kaGie~eDie~~ymAGAfGtyid~~~A~~iGliPd~~~-kV~q~GNtslagAr~aL 540 (614)
T COG3894 475 AIRAGHMTLIEKAGIELEDIERIYMAGAFGTYIDAKKAMVIGLIPDCDL-KVKQIGNTSLAGAREAL 540 (614)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHEEECCCCCCCCCHHHHHEEECCCCCCH-HHHHHCCCHHHHHHHHH
T ss_conf 8998899999980997554244032145523026567303505678515-46543660688899998
No 258
>TIGR02445 fadA acetyl-CoA C-acyltransferase FadA; InterPro: IPR012805 This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (2.3.1.16 from EC) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (IPR012799 from INTERPRO). The FadBA complex is the major complex active for beta-oxidation of fatty acids in Escherichia coli.; GO: 0003988 acetyl-CoA C-acyltransferase activity, 0006631 fatty acid metabolic process, 0016042 lipid catabolic process.
Probab=57.29 E-value=10 Score=17.99 Aligned_cols=93 Identities=13% Similarity=0.109 Sum_probs=59.4
Q ss_pred CCCHHHHHHHHHHHHHHHC-CCCCCCCCEEEEEEEEECCCCCC-CCCCCCCCC-CCC-CCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 8879999999999986430-13222344258843100236887-432211210-023-8633342101231012567657
Q gi|254780489|r 51 HETLTDIAIQAGDIALRNA-NIKKDSISLTLLATSTPDHLLPP-SSPLITHRL-GLM-QSGAIDLTGACAGFLYALVMAD 126 (325)
Q Consensus 51 ~e~~~~la~~Aa~~aL~~a-~~~~~dId~ii~~s~t~d~~~P~-~a~~v~~~L-g~~-~~~~~di~~~C~g~l~aL~~A~ 126 (325)
+..+.||+..-.++.|++. .++|.+|+-|+.+.+.. .+.-+ ..++.+.-| .++ ...+..++--|.+.++||..+.
T Consensus 22 ~~raedlsahl~~~~l~rn~~~~~~~~~d~~WGCv~q-tleqG~n~ar~a~ll~~~P~~~~a~tv~rlCGssm~alh~~a 100 (385)
T TIGR02445 22 NTRAEDLSAHLIKKLLARNPKVDPAEVEDIYWGCVQQ-TLEQGFNIARNAALLAEVPHEVAAVTVNRLCGSSMQALHDAA 100 (385)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 0136777899999998513355723443454554677-775347888888898734302222455544203589999887
Q ss_pred HHHHCCCCEEEEEEE-CCC
Q ss_conf 887438850588620-122
Q gi|254780489|r 127 SYINSHQKPVLIIAA-NLL 144 (325)
Q Consensus 127 ~~i~~g~~~vLVv~~-e~~ 144 (325)
..+-++...+.+|++ |.+
T Consensus 101 ~~imt~~~~~~~~GGvehm 119 (385)
T TIGR02445 101 RAIMTGDAEVCLIGGVEHM 119 (385)
T ss_pred HHHHCCCCCEEEECCCCCC
T ss_conf 8763178757998260000
No 259
>COG2073 CbiG Cobalamin biosynthesis protein CbiG [Coenzyme metabolism]
Probab=56.83 E-value=15 Score=16.99 Aligned_cols=84 Identities=15% Similarity=0.210 Sum_probs=56.7
Q ss_pred CHHHHHHHHHHHHCCCCCCCCEEEECC--CCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC
Q ss_conf 003678988997401200122463056--541389999997197865700218540933000599999999980678999
Q gi|254780489|r 229 IMAQSAKQSLRKSDLQPQDINRFIPHQ--ANSRIIQKVCEKIGLSKRIMVNSLKDFGNSSSASIPLSLSLENQRKPFQKG 306 (325)
Q Consensus 229 ~~~~~i~~~l~~~gl~~~did~~i~Hq--~~~~~~~~~~~~lgi~~~~~~~~l~~~GN~~sAsi~~~L~~~~~~g~i~~G 306 (325)
.+...++++|+..++.+.+++.+.-+. .+.+.+....+.++.|..-+-..+++.|=-+. +-|.++-. .+.
T Consensus 210 ~~~~~i~~~l~~~~l~~~~i~~i~s~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~gv~~v-ae~~al~~---~~~---- 281 (298)
T COG2073 210 LLECAIEKALEGLGLAPKRIDGIASIALKADEPGLIQLAKKLGVPFITFEFVLKEVGVPGV-AEPAALLA---SGG---- 281 (298)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHEEEHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCH-HHHHHHHH---CCC----
T ss_conf 9999999999875998556322340787535777899999809994411678887387303-56889985---798----
Q ss_pred CEEEEEEECCCCCCC
Q ss_conf 899999861551020
Q gi|254780489|r 307 EKILTISCRRGNDRG 321 (325)
Q Consensus 307 d~vll~~~G~G~s~g 321 (325)
.+..-.++.|.|.+
T Consensus 282 -l~~~~~~~~~vTia 295 (298)
T COG2073 282 -LLVKKAKGNGVTIA 295 (298)
T ss_pred -CEEEEECCCCEEEE
T ss_conf -26665037741788
No 260
>TIGR01120 rpiB ribose 5-phosphate isomerase B; InterPro: IPR004785 Ribose 5-phosphate isomerase (5.3.1.6 from EC) forms a homodimer and catalyses the interconversion of D-ribose 5-phosphate and D-ribulose 5-phosphate in the non-oxidative branch of the pentose phosphate pathway. This reaction permits the synthesis of ribose from other sugars, as well as the recycling of sugars from nucleotide breakdown. Two unrelated enzymes can catalyse this reaction: RpiA (found in most organisms) and RpiB (found in some bacteria and eukaryotes). RpiB is also involved in metabolism of the rare sugar, allose, in addition to ribose sugars. The structures of RpiA and RpiB are distinct, RpiB having a Rossmann-type alpha/beta/alpha sandwich topology . This entry represents the RpiB enzyme.; GO: 0004751 ribose-5-phosphate isomerase activity, 0006098 pentose-phosphate shunt.
Probab=56.56 E-value=8.4 Score=18.58 Aligned_cols=75 Identities=7% Similarity=0.005 Sum_probs=34.2
Q ss_pred HHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 99999864301322234425884310023688743221121002386333421012310125676578874388505886
Q gi|254780489|r 60 QAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYINSHQKPVLII 139 (325)
Q Consensus 60 ~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~g~~~vLVv 139 (325)
+-++.=|+.-++..-|.+..- +.. .-+|.-|..|+.+.-- +.....| --|..+ -++.++++.+++ -|+.|
T Consensus 15 e~ik~fL~~~g~kvid~GT~~--~er--tdYP~YAk~V~~av~~-g~~~~GI-LiCgTG-iGmSi~ANkF~G--IRAal- 84 (143)
T TIGR01120 15 EKIKEFLEDKGFKVIDVGTLA--SER--TDYPDYAKEVVRAVLE-GKAERGI-LICGTG-IGMSIAANKFKG--IRAAL- 84 (143)
T ss_pred HHHHHHHCCCCEEEEEECCCC--CCC--CCCCHHHHHHHHHHHC-CCCCCCE-EEEECC-CCHHHHCCCCCC--CEEEE-
T ss_conf 889998613985798753788--676--3660689999999744-8766766-885053-211001012475--05663-
Q ss_pred EECCC
Q ss_conf 20122
Q gi|254780489|r 140 AANLL 144 (325)
Q Consensus 140 ~~e~~ 144 (325)
|.|.+
T Consensus 85 C~~~Y 89 (143)
T TIGR01120 85 CLDEY 89 (143)
T ss_pred CCCHH
T ss_conf 26524
No 261
>pfam03377 Avirulence Xanthomonas avirulence protein, Avr/PthA.
Probab=55.76 E-value=15 Score=16.88 Aligned_cols=42 Identities=17% Similarity=0.313 Sum_probs=26.2
Q ss_pred HHHHHCCCCCCCCEEEECCCCCHHHHHHHHHC-------CCCHHHHHHH
Q ss_conf 89974012001224630565413899999971-------9786570021
Q gi|254780489|r 237 SLRKSDLQPQDINRFIPHQANSRIIQKVCEKI-------GLSKRIMVNS 278 (325)
Q Consensus 237 ~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~l-------gi~~~~~~~~ 278 (325)
++...|+++++|--+.-|-+++..++.+.+.+ ++.+++++.+
T Consensus 204 l~~~~gL~~~qVVaIASh~GgkqALe~v~~~l~~L~~~~~Ls~~qvvai 252 (289)
T pfam03377 204 LCQAHGLTPDQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPDQVVAI 252 (289)
T ss_pred HHHHCCCCHHHEEHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEH
T ss_conf 8751499988911002168727899999988687653502898784200
No 262
>TIGR01991 HscA Fe-S protein assembly chaperone HscA; InterPro: IPR010236 Iron-sulphur (FeS) clusters are important cofactors for numerous proteins involved in electron transfer, in redox and non-redox catalysis, in gene regulation, and as sensors of oxygen and iron. These functions depend on the various FeS cluster prosthetic groups, the most common being [2Fe-2S] and [4Fe-4S] . FeS cluster assembly is a complex process involving the mobilisation of Fe and S atoms from storage sources, their assembly into [Fe-S] form, their transport to specific cellular locations, and their transfer to recipient apoproteins. So far, three FeS assembly machineries have been identified, which are capable of synthesising all types of [Fe-S] clusters: ISC (iron-sulphur cluster), SUF (sulphur assimilation), and NIF (nitrogen fixation) systems. The ISC system is conserved in eubacteria and eukaryotes (mitochondria), and has broad specificity, targeting general FeS proteins , . It is encoded by the isc operon (iscRSUA-hscBA-fdx-iscX). IscS is a cysteine desulphurase, which obtains S from cysteine (converting it to alanine) and serves as a S donor for FeS cluster assembly. IscU and IscA act as scaffolds to accept S and Fe atoms, assembling clusters and transfering them to recipient apoproteins. HscA is a molecular chaperone and HscB is a co-chaperone. Fdx is a [2Fe-2S]-type ferredoxin. IscR is a transcription factor that regulates expression of the isc operon. IscX (also known as YfhJ) appears to interact with IscS and may function as an Fe donor during cluster assembly . The SUF system is an alternative pathway to the ISC system that operates under iron starvation and oxidative stress. It is found in eubacteria, archaea and eukaryotes (plastids). The SUF system is encoded by the suf operon (sufABCDSE), and the six encoded proteins are arranged into two complexes (SufSE and SufBCD) and one protein (SufA). SufS is a pyridoxal-phosphate (PLP) protein displaying cysteine desulphurase activity. SufE acts as a scaffold protein that accepts S from SufS and donates it to SufA . SufC is an ATPase with an unorthodox ATP-binding cassette (ABC)-like component. No specific functions have been assigned to SufB and SufD. SufA is homologous to IscA , acting as a scaffold protein in which Fe and S atoms are assembled into [FeS] cluster forms, which can then easily be transferred to apoproteins targets. In the NIF system, NifS and NifU are required for the formation of metalloclusters of nitrogenase in Azotobacter vinelandii, and other organisms, as well as in the maturation of other FeS proteins. Nitrogenase catalyses the fixation of nitrogen. It contains a complex cluster, the FeMo cofactor, which contains molybdenum, Fe and S. NifS is a cysteine desulphurase. NifU binds one Fe atom at its N-terminal, assembling an FeS cluster that is transferred to nitrogenase apoproteins . Nif proteins involved in the formation of FeS clusters can also be found in organisms that do not fix nitrogen . This entry represents the HscA chaperone protein from the SUF system. HscA (or Hsc66) is a specialised bacterial Hsp70-class molecular chaperone that participates in the assembly of iron-sulphur cluster proteins. HscA resembles DnaK, but belongs to a separate clade. HscA interacts with IscU, which is believed to serve as a template for Fe-S cluster formation. The HscA-IscU interaction is facilitated by the J-type co-chaperone protein HscB (or Hsc20), which binds to both HscA and IscU, bringing them into contact with each other. HscA recognises a conserved LPPVK sequence motif at positions 99-103 of IscU .; GO: 0005524 ATP binding, 0016887 ATPase activity, 0051082 unfolded protein binding, 0016226 iron-sulfur cluster assembly.
Probab=55.13 E-value=6.1 Score=19.48 Aligned_cols=104 Identities=18% Similarity=0.262 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHCCCCCCCCCEEE-EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH--HHHHHCCCC
Q ss_conf 99999998643013222344258-843100236887432211210023863334210123101256765--788743885
Q gi|254780489|r 58 AIQAGDIALRNANIKKDSISLTL-LATSTPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMA--DSYINSHQK 134 (325)
Q Consensus 58 a~~Aa~~aL~~a~~~~~dId~ii-~~s~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A--~~~i~~g~~ 134 (325)
..+++|+||++||+++++|--|| ++.+|+ +|-.=..|++-.|-++-- ||+= --+.||-.| ++.+.+|.+
T Consensus 322 tl~~crrAlkDaGV~~~e~~~VvmVGGSTR---vp~Vr~~VaelFg~~PL~--~ldP---D~VVAlGAAiQAd~LaGNk~ 393 (628)
T TIGR01991 322 TLLPCRRALKDAGVEKEEVKGVVMVGGSTR---VPKVREAVAELFGREPLT--DLDP---DKVVALGAAIQADVLAGNKR 393 (628)
T ss_pred HHHHHHHHHHHCCCCHHHCCEEEEECCCCC---HHHHHHHHHHHHCCCCCC--CCCC---CHHHHHHHHHHHHHHCCCCC
T ss_conf 216788888752788325326578626546---167999998863778788--8875---14246558998755326888
Q ss_pred --EEEE-------EEECCCC----CCCCCCC---CC----CCCCCCCCEEEEEECC
Q ss_conf --0588-------6201224----4446222---44----3432544200112205
Q gi|254780489|r 135 --PVLI-------IAANLLS----RRINLED---KD----TAIIFGDAAGAVVLAP 170 (325)
Q Consensus 135 --~vLV-------v~~e~~S----~~~d~~d---~~----~~~lfGDgA~A~il~~ 170 (325)
--|+ .+-|++- +.+ |.+ |. --++|=||=.||.+.-
T Consensus 394 ~~elLLLDV~PLSLGlETmGGL~EKiI-PRN~tiP~ARAQ~FTTFKDgQTAM~IhV 448 (628)
T TIGR01991 394 DEELLLLDVIPLSLGLETMGGLMEKII-PRNSTIPVARAQDFTTFKDGQTAMVIHV 448 (628)
T ss_pred CCCEEHHCCCCHHCCHHHCCCCEEEEC-CCCCCCCCCCCCCCCCCCCCCEEEEEEE
T ss_conf 864001101211100232067356652-7862998512665545455852668876
No 263
>PRK13411 molecular chaperone DnaK; Provisional
Probab=53.17 E-value=17 Score=16.61 Aligned_cols=50 Identities=22% Similarity=0.365 Sum_probs=29.5
Q ss_pred CHHHHHHHC----CCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHH---HHHHHHHC
Q ss_conf 145434320----100367898899740120012246305654138---99999971
Q gi|254780489|r 219 GADIFYNAV----KIMAQSAKQSLRKSDLQPQDINRFIPHQANSRI---IQKVCEKI 268 (325)
Q Consensus 219 g~~v~~~~~----~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~---~~~~~~~l 268 (325)
.|.-|+..+ ....+.++++|++++++++|||.++.-=++-+| .+.+.+.+
T Consensus 295 TR~~FE~L~~~L~~rt~~pv~~aL~dA~l~~~dId~ViLVGGSTRIP~Vq~~v~~~F 351 (655)
T PRK13411 295 TRAKFEELAKDLVEATIEPVQQALKDAGLTPEDIDRIILVGGSTRIPAVQEAIQQFF 351 (655)
T ss_pred EHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCCHHHHHHHHHHH
T ss_conf 099999999999999998899999980998311789999888146579999999982
No 264
>TIGR02810 agaZ_gatZ D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit; InterPro: IPR012062 Escherichia coli and other enteric bacteria contain two closely related D-tagatose 1,6-bisphosphate (TagBP)-specific aldolases involved in catabolism of galactitol (genes gatY gatZ) and of N-acetyl-galactosamine and D-galactosamine (genes kbaY, kbaZ, also called agaY, agaZ). The catalytic subunits GatY/KbaY alone are sufficient to show aldolase activity and contain most or all of the residues that have been identified as essential in substrate/product recognition and catalysis for class II aldolases , . However, these aldolases differ from other Class II aldolases (which are homodimeric enzymes) in that they require subunits GatZ/KbaZ for full activity and for good in vivo and in vitro stability. The Z subunits alone do not show any aldolase activity . It should be noted that the previous suggestion of a tagatose 6P-kinase function for AgaZ and other members of this family turned out to be erroneous , .; GO: 0009024 tagatose-6-phosphate kinase activity, 0019402 galactitol metabolic process.
Probab=52.36 E-value=3.3 Score=21.21 Aligned_cols=33 Identities=18% Similarity=0.379 Sum_probs=18.8
Q ss_pred HHHHHHHCCCCCC-CCEEEECCCCCHHHHHHHHHC
Q ss_conf 9889974012001-224630565413899999971
Q gi|254780489|r 235 KQSLRKSDLQPQD-INRFIPHQANSRIIQKVCEKI 268 (325)
Q Consensus 235 ~~~l~~~gl~~~d-id~~i~Hq~~~~~~~~~~~~l 268 (325)
++.|++ ++|.+| |.|++||+-=....+.+.+.|
T Consensus 347 ~q~L~r-~ySySDRIRYYWP~P~~~~Av~~L~~nL 380 (430)
T TIGR02810 347 EQRLDR-HYSYSDRIRYYWPHPRIAAAVETLMANL 380 (430)
T ss_pred HHHHHH-CCCCCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 999986-0772135335797078999999999853
No 265
>PRK09450 cyaA adenylate cyclase; Provisional
Probab=52.31 E-value=17 Score=16.52 Aligned_cols=15 Identities=7% Similarity=0.009 Sum_probs=9.3
Q ss_pred HHHHHHHCCCHHHEE
Q ss_conf 899988099976831
Q gi|254780489|r 23 SIIERHLNLKLGVIE 37 (325)
Q Consensus 23 ~~l~~~~~~~~~~i~ 37 (325)
+.+.+.++|+.+.|.
T Consensus 353 ~~Lv~~WgWs~~~l~ 367 (833)
T PRK09450 353 SQLVSEWGWSDELLA 367 (833)
T ss_pred HHHHHHCCCCHHHHH
T ss_conf 999986699989998
No 266
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=52.24 E-value=17 Score=16.51 Aligned_cols=25 Identities=24% Similarity=0.391 Sum_probs=16.6
Q ss_pred EEEEEEEEECCCCCCCHHHHHHHHCCC
Q ss_conf 099999973588613888999880999
Q gi|254780489|r 6 SCILGFGHAVPNQCIHNSIIERHLNLK 32 (325)
Q Consensus 6 ~~I~g~g~~lP~~~i~n~~l~~~~~~~ 32 (325)
--|.++..|.|...+ +++.+.+|.+
T Consensus 5 ~~~~~~~~y~~g~~~--~~~~~~~g~~ 29 (359)
T PRK03158 5 EQLLGLRPYQPGKPI--EEVKREYGLS 29 (359)
T ss_pred HHHCCCCCCCCCCCH--HHHHHHHCCC
T ss_conf 344389998999998--9999870999
No 267
>PTZ00340 O-sialoglycoprotein endopeptidase; Provisional
Probab=51.95 E-value=18 Score=16.49 Aligned_cols=33 Identities=30% Similarity=0.284 Sum_probs=23.3
Q ss_pred HHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCC
Q ss_conf 99999986430132223442588431002368874
Q gi|254780489|r 59 IQAGDIALRNANIKKDSISLTLLATSTPDHLLPPS 93 (325)
Q Consensus 59 ~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~ 93 (325)
....++||++++++++|||.|- .|.-| -+.++.
T Consensus 61 ~~lv~~aL~~a~i~~~did~IA-vT~gP-GL~g~L 93 (348)
T PTZ00340 61 LSLVQEALEEAGITLSDISLIC-YTKGP-GMGAPL 93 (348)
T ss_pred HHHHHHHHHHCCCCHHCCCEEE-ECCCC-CCHHHH
T ss_conf 9999999998599841185799-72799-851658
No 268
>KOG2707 consensus
Probab=51.91 E-value=13 Score=17.34 Aligned_cols=30 Identities=17% Similarity=0.099 Sum_probs=22.8
Q ss_pred HHHHHHHHHHCCCCCCCCCEEEEEEEEECCC
Q ss_conf 9999998643013222344258843100236
Q gi|254780489|r 59 IQAGDIALRNANIKKDSISLTLLATSTPDHL 89 (325)
Q Consensus 59 ~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~ 89 (325)
.+..++||++||.+|.|+|+|- .|..|...
T Consensus 87 ~~~iqral~aa~~~p~dldaIA-VT~gPGl~ 116 (405)
T KOG2707 87 PRLIQRALDAAGLSPKDLDAIA-VTRGPGLP 116 (405)
T ss_pred HHHHHHHHHHCCCCCCCCEEEE-EECCCCCE
T ss_conf 8999999997089945511699-96389964
No 269
>TIGR00329 gcp metalloendopeptidase, putative, glycoprotease family; InterPro: IPR000905 Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site . The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases . Peptidases are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry. Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues . Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 , . Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion , . Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis . The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region .; GO: 0008450 O-sialoglycoprotein endopeptidase activity, 0006508 proteolysis.
Probab=50.87 E-value=18 Score=16.38 Aligned_cols=75 Identities=23% Similarity=0.324 Sum_probs=39.1
Q ss_pred HHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCC--CCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHCC----
Q ss_conf 9999986430132223442588431002368874--32211210023-8633342101231012567657887438----
Q gi|254780489|r 60 QAGDIALRNANIKKDSISLTLLATSTPDHLLPPS--SPLITHRLGLM-QSGAIDLTGACAGFLYALVMADSYINSH---- 132 (325)
Q Consensus 60 ~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~--a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~~i~~g---- 132 (325)
.=.++||+++|++..|||+|-| |.-| -+.|++ ...+++-|-+. +.|..-|+ =|.|=+.+ .+|..+
T Consensus 59 ~L~~~Al~~~~~~~~~I~~IA~-t~~P-GL~g~L~vGat~Ar~La~~l~kPligv~-H~~GH~~~-----~~l~~~~~~~ 130 (337)
T TIGR00329 59 PLLERALKESNVDISEIDLIAV-TSGP-GLGGALIVGATFARSLALSLDKPLIGVN-HLLGHIYA-----PLLDTNLNQL 130 (337)
T ss_pred HHHHHHHHHHCCCCCCCCEEEE-ECCC-CCCCHHHHHHHHHHHHHHHHCCCCCCHH-HHHHHHHH-----HHHCCCCCCC
T ss_conf 9999999982887010257898-5587-9851468999999999898728955145-78999988-----7414777453
Q ss_pred C-CE-EEEEEEC
Q ss_conf 8-50-5886201
Q gi|254780489|r 133 Q-KP-VLIIAAN 142 (325)
Q Consensus 133 ~-~~-vLVv~~e 142 (325)
. .. .|+|++-
T Consensus 131 ~~P~~~LlVSGG 142 (337)
T TIGR00329 131 QFPFVSLLVSGG 142 (337)
T ss_pred CCCCEEEEEECC
T ss_conf 667316777540
No 270
>COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]
Probab=50.81 E-value=10 Score=18.02 Aligned_cols=25 Identities=28% Similarity=0.357 Sum_probs=11.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 2112100238633342101231012
Q gi|254780489|r 96 LITHRLGLMQSGAIDLTGACAGFLY 120 (325)
Q Consensus 96 ~v~~~Lg~~~~~~~di~~~C~g~l~ 120 (325)
.|+-..++..+..+|+-..|.|...
T Consensus 64 ~i~~d~~~~~~~~~~~v~v~~g~~~ 88 (328)
T COG4977 64 SIAPDGGLEAAPPIDILPVCGGLGP 88 (328)
T ss_pred EEECCCCCCCCCCCEEEEEECCCCC
T ss_conf 6716876455676329998068775
No 271
>cd04333 ProX_deacylase This CD, composed mainly of bacterial single-domain proteins, includes the Thermus thermophilus (Tt) YbaK-like protein, a homolog of the trans-acting Escherichia coli YbaK Cys-tRNA(Pro) deacylase and the Agrobacterium tumefaciens ProX Ala-tRNA(Pro) deacylase and also the cis-acting prolyl-tRNA synthetase-editing domain (ProRS-INS). While ProX and ProRS-INS hydrolyze misacylated Ala-tRNA(Pro), the E. coli YbaK hydrolyzes misacylated Cys-tRNA(Pro). A few CD members are N-terminal, YbaK-ProX-like domains of an uncharacterized protein with a C-terminal, predicted Fe-S protein domain.
Probab=50.78 E-value=18 Score=16.37 Aligned_cols=14 Identities=7% Similarity=-0.033 Sum_probs=7.4
Q ss_pred HHHHHHHHHCCCCC
Q ss_conf 99999864301322
Q gi|254780489|r 60 QAGDIALRNANIKK 73 (325)
Q Consensus 60 ~Aa~~aL~~a~~~~ 73 (325)
+-.++.|++.|++-
T Consensus 2 e~v~~~L~~~gi~~ 15 (148)
T cd04333 2 ERVRAFLAARGLDL 15 (148)
T ss_pred HHHHHHHHHCCCCC
T ss_conf 77999999769996
No 272
>PRK09604 putative DNA-binding/iron metalloprotein/AP endonuclease; Reviewed
Probab=50.66 E-value=18 Score=16.35 Aligned_cols=33 Identities=21% Similarity=0.215 Sum_probs=23.7
Q ss_pred HHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCC
Q ss_conf 99999986430132223442588431002368874
Q gi|254780489|r 59 IQAGDIALRNANIKKDSISLTLLATSTPDHLLPPS 93 (325)
Q Consensus 59 ~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~ 93 (325)
..-.++||++++++++|||.|- .|.-| -+.|+.
T Consensus 56 ~~lv~~al~~a~i~~~~id~IA-vT~gP-GL~g~L 88 (335)
T PRK09604 56 PPLLEEALKEAGLSLEDIDAIA-VTAGP-GLVGAL 88 (335)
T ss_pred HHHHHHHHHHCCCCHHHCCEEE-EECCC-CCCHHH
T ss_conf 9999999986599987897899-94799-961139
No 273
>pfam00814 Peptidase_M22 Glycoprotease family. The Peptidase M22 proteins are part of the HSP70-actin superfamily. The region represented here is an insert into the fold and is not found in the rest of the family (beyond the Peptidase M22 family). Included in this family are the Rhizobial NodU proteins and the HypF regulator. This region also contains the histidine dyad believed to coordinate the metal ion and hence provide catalytic activity. Interestingly the histidines are not well conserved, and there is a lack of experimental evidence to support peptidase activity as a general property of this family. There also appear to be instances of this domain outside of the HSP70-actin superfamily.
Probab=50.10 E-value=13 Score=17.36 Aligned_cols=34 Identities=18% Similarity=0.218 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCC
Q ss_conf 999999998643013222344258843100236887
Q gi|254780489|r 57 IAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPP 92 (325)
Q Consensus 57 la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~ 92 (325)
--....+++|++++++++|||.|-+ |.-| -+.++
T Consensus 31 ~i~~~i~~~l~~a~i~~~did~IAv-t~GP-Gl~~~ 64 (225)
T pfam00814 31 RLLPLIEEALAEAGLSLEDLDAIAV-TAGP-GLFTG 64 (225)
T ss_pred HHHHHHHHHHHHCCCCHHHCCEEEE-ECCC-CHHHH
T ss_conf 9999999999984999656899998-0599-81886
No 274
>TIGR02316 propion_prpE propionate--CoA ligase; InterPro: IPR012694 This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterised members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.; GO: 0050218 propionate-CoA ligase activity, 0019629 propionate catabolic process 2-methylcitrate cycle.
Probab=49.80 E-value=19 Score=16.27 Aligned_cols=52 Identities=13% Similarity=0.220 Sum_probs=39.0
Q ss_pred CCHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEC
Q ss_conf 997683111475088994898879999999999986430132223442588431002
Q gi|254780489|r 31 LKLGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPD 87 (325)
Q Consensus 31 ~~~~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d 87 (325)
++...|...+-.--++|.-.++|+ |...|..+-|++ .++.+-||..+|.|..
T Consensus 33 TP~~~~LD~s~~PF~~WF~~G~TN--LC~NA~DRhL~~---~ge~lALv~vSsET~~ 84 (634)
T TIGR02316 33 TPYARVLDDSNPPFARWFVGGRTN--LCHNAVDRHLEK---RGEQLALVAVSSETGE 84 (634)
T ss_pred CCHHHHHCCCCCCHHHHCCCCCCC--CHHHHHHHHHHC---CCCCEEEEEEECCCCC
T ss_conf 875787114577746740478434--227677888631---7761788887515786
No 275
>TIGR01341 aconitase_1 aconitate hydratase 1; InterPro: IPR006249 Aconitase (aconitate hydratase; 4.2.1.3 from EC) is an iron-sulphur protein that contains a [4Fe-4S]-cluster and catalyses the interconversion of isocitrate and citrate via a cis-aconitate intermediate. Aconitase functions in both the TCA and glyoxylate cycles, however unlike the majority of iron-sulphur proteins that function as electron carriers, the [4Fe-4S]-cluster of aconitase reacts directly with an enzyme substrate. In eukaryotes there is a cytosolic form (cAcn) and a mitochondrial form (mAcn) of the enzyme. In bacteria there are also 2 forms, aconitase A (AcnA) and B (AcnB). Several aconitases are known to be multi-functional enzymes with a second non-catalytic, but essential function that arises when the cellular environment changes, such as when iron levels drop , . Eukaryotic cAcn and mAcn, and bacterial AcnA have the same domain organisation, consisting of three N-terminal alpha/beta/alpha domains, a linker region, followed by a C-terminal 'swivel' domain with a beta/beta/alpha structure (1-2-3-linker-4), although mAcn is small than cAcn. However, bacterial AcnB has a different organisation: it contains an N-terminal HEAT-like domain, followed by the 'swivel' domain, then the three alpha/beta/alpha domains (HEAT-4-1-2-3) . Below is a description of some of the multi-functional activities associated with different aconitases. Eukaryotic mAcn catalyses the second step of the mitochondrial TCA cycle, which is important for energy production, providing high energy electrons in the form of NADH and FADH2 to the mitochondrial oxidative phosphorylation pathway . The TCA cycle also provides precursors for haem and amino acid production. This enzyme has a second, non-catalytic but essential role in mitochondrial DNA (mtDNA) maintenance: mAcn acts to stabilise mtDNA, forming part of mtDNA protein-DNA complexes known as nucleoids. mAcn is thought to reversibly model nucleoids to directly influence mitochondrial gene expression in response to changes in the cellular environment. Therefore, mAcn can influence the expression of components of the oxidative phosphorylation pathway encoded in mtDNA. Eukaryotic cAcn enzyme balances the amount of citrate and isocitrate in the cytoplasm, which in turn creates a balance between the amount of NADPH generated from isocitrate by isocitrate dehydrogenase with the amount of acetyl-CoA generated from citrate by citrate lyase. Fatty acid synthesis requires both NADPH and acetyl-CoA, as do other metabolic processes, including the need for NADPH to combat oxidative stress. The enzymatic form of cAcn predominates when iron levels are normal, but if they drop sufficiently to cause the disassembly of the [4Fe-4S]-cluster, then cAcn undergoes a conformational change from a compact enzyme to a more open L-shaped protein known as iron regulatory protein 1 (IRP1; or IRE-binding protein 1, IREBP1) , . As IRP1, the catalytic site and the [4Fe-4S]-cluster are lost, and two new RNA-binding sites appear. IRP1 functions in the post-transcriptional regulation of genes involved in iron metabolism - it binds to mRNA iron-responsive elements (IRE), 30-nucleotide stem-loop structures at the 3' or 5' end of specific transcripts. Transcripts containing an IRE include ferritin L and H subunits (iron storage), transferrin (iron plasma chaperone), transferrin receptor (iron uptake into cells), ferroportin (iron exporter), mAcn, succinate dehydrogenase, erythroid aminolevulinic acid synthetase (tetrapyrrole biosynthesis), among others. If the IRE is in the 5'-UTR of the transcript (e.g. in ferritin mRNA), then IRP1-binding prevents its translation by blocking the transcript from binding to the ribosome. If the IRE is in the 3'-UTR of the transcript (e.g. transferrin receptor), then IRP1-binding protects it from endonuclease degradation, thereby prolonging the half-life of the transcript and enabling it to be translated . IRP2 is another IRE-binding protein that binds to the same transcripts as IRP1. However, since IRP1 is predominantly in the enzymatic cAcn form, it is IRP2 that acts as the major metabolic regulator that maintains iron homeostasis . Although IRP2 is homologous to IRP1, IPR2 lacks aconitase activity, and is known only to have a single function in the post-transcriptional regulation of iron metabolism genes . In iron-replete cells, IRP2 activity is regulated primarily by iron-dependent degradation through the ubiquitin-proteasomal system. Bacterial AcnB is also known to be multi-functional. In addition to its role in the TCA cycle, AcnB was shown to be a post-transcriptional regulator of gene expression in Escherichia coli and Salmonella enterica , . In S.enterica, AcnB initiates a regulatory cascade controlling flagella biosynthesis through an interaction with the ftsH transcript, an alternative RNA polymerase sigma factor. This binding lowers the intracellular concentration of FtsH protease, which in turn enhances the amount of RNA polymerase sigma32 factor (normally degraded by FtsH protease), and sigma32 then increases the synthesis of chaperone DnaK, which in turn promotes the synthesis of the flagellar protein FliC. AcnB regulates the synthesis of other proteins as well, such as superoxide dismutase (SodA) and other enzymes involved in oxidative stress. This entry represents bacterial aconitase A (AcnA), eukaryotic cytosolic aconitase (cAcn/IRP1), iron regulatory protein 2 (IRP2), and a few mitochondrial aconitases (certain mAcn proteins, but not the majority of these enzymes). More information about these proteins can be found at Protein of the Month: Aconitase .; GO: 0051539 4 iron 4 sulfur cluster binding, 0008152 metabolic process.
Probab=49.24 E-value=19 Score=16.21 Aligned_cols=70 Identities=19% Similarity=0.180 Sum_probs=43.6
Q ss_pred CCCCCHHHHHHHHCCCHHHEEECCCCCEE--EEECCCC----CHHHHHHHHHHHHHHHCCCCCCCC------CEEEEEEE
Q ss_conf 86138889998809997683111475088--9948988----799999999999864301322234------42588431
Q gi|254780489|r 17 NQCIHNSIIERHLNLKLGVIEQKTGIKYR--YWAEKHE----TLTDIAIQAGDIALRNANIKKDSI------SLTLLATS 84 (325)
Q Consensus 17 ~~~i~n~~l~~~~~~~~~~i~~~tGI~~R--~~~~~~e----~~~~la~~Aa~~aL~~a~~~~~dI------d~ii~~s~ 84 (325)
+..|+.+|+++..+|..+...+ .-|.-| ||.-.|= -..||| |-|+++.+-|-||+-| ||||=+|+
T Consensus 39 G~~i~~eD~e~i~~W~~~~~~d-~Ei~FkP~RV~mQDFTGVPAVVDLA--~mR~am~~LGgDp~kINP~vPVDLVIDHSV 115 (896)
T TIGR01341 39 GFSIKEEDVEAILKWKKEELKD-VEIAFKPARVVMQDFTGVPAVVDLA--AMRDAMKNLGGDPEKINPLVPVDLVIDHSV 115 (896)
T ss_pred CCCCCHHHHHHHHCCCCCCCCC-CCCCCCCCEEEEECCCCCCHHHHHH--HHHHHHHHHCCCCCCCCCCCCCCEEECCCE
T ss_conf 8420678998884431135466-1467564136752437872788889--999999982788120488765233775606
Q ss_pred EECCC
Q ss_conf 00236
Q gi|254780489|r 85 TPDHL 89 (325)
Q Consensus 85 t~d~~ 89 (325)
+=|+.
T Consensus 116 QVD~~ 120 (896)
T TIGR01341 116 QVDYY 120 (896)
T ss_pred EECCC
T ss_conf 75456
No 276
>KOG2708 consensus
Probab=48.59 E-value=12 Score=17.60 Aligned_cols=95 Identities=22% Similarity=0.336 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCC-CCCCCCCCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CC
Q ss_conf 999999986430132223442588431002368874-3221121002-38633342101231012567657887438-85
Q gi|254780489|r 58 AIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPS-SPLITHRLGL-MQSGAIDLTGACAGFLYALVMADSYINSH-QK 134 (325)
Q Consensus 58 a~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~-a~~v~~~Lg~-~~~~~~di~~~C~g~l~aL~~A~~~i~~g-~~ 134 (325)
-..-.+++|+.++++++|||.+.|. --|..-.|=. .+.+++-|-+ .+.+-..+| -|-|- + -....-+| ..
T Consensus 53 il~Lv~~al~ea~v~~~diD~icyT-KGPGmgaPL~~vaivaRtlsllw~kPlv~VN-HCigH---I--EMGR~iTgA~n 125 (336)
T KOG2708 53 ILGLVKQALEEAGVTSDDIDCICYT-KGPGMGAPLSVVAIVARTLSLLWNKPLVGVN-HCIGH---I--EMGREITGAQN 125 (336)
T ss_pred HHHHHHHHHHHCCCCHHHCCEEEEC-CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCH-HHHHH---H--HHCCEECCCCC
T ss_conf 9999999998739975228789972-7898787626689999999998279832301-21111---3--22102216889
Q ss_pred E-EEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 0-58862012244446222443432544
Q gi|254780489|r 135 P-VLIIAANLLSRRINLEDKDTAIIFGD 161 (325)
Q Consensus 135 ~-vLVv~~e~~S~~~d~~d~~~~~lfGD 161 (325)
+ +|-|++. .++.+-|.++. +-+||.
T Consensus 126 PvvLYvSGG-NTQvIAYse~r-YrIFGE 151 (336)
T KOG2708 126 PVVLYVSGG-NTQVIAYSEKR-YRIFGE 151 (336)
T ss_pred CEEEEEECC-CEEEEEECCCE-EEEECC
T ss_conf 779999079-66999971541-454032
No 277
>PRK03321 putative aminotransferase; Provisional
Probab=48.36 E-value=20 Score=16.13 Aligned_cols=16 Identities=19% Similarity=0.364 Sum_probs=10.7
Q ss_pred EEEEEEEECCCCCCCH
Q ss_conf 9999997358861388
Q gi|254780489|r 7 CILGFGHAVPNQCIHN 22 (325)
Q Consensus 7 ~I~g~g~~lP~~~i~n 22 (325)
-|..+-.|.|.+.++.
T Consensus 8 ~i~~l~~Y~pg~~~~~ 23 (352)
T PRK03321 8 ELAGLPAYVPGKTVPG 23 (352)
T ss_pred HHHCCCCCCCCCCCCC
T ss_conf 6517999899899999
No 278
>TIGR02177 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family; InterPro: IPR011896 A number of anaerobic and microaerophilic species lack pyruvate dehydrogenase and have instead a four subunit, oxygen-sensitive pyruvate oxidoreductase, with either ferredoxins or flavodoxins used as the acceptor. Several related four-subunit enzymes may exist in the same species. This entry describes the beta subunits, representing mostly pyruvate and 2-ketoisovalerate specific enzymes..
Probab=48.28 E-value=20 Score=16.16 Aligned_cols=40 Identities=18% Similarity=0.200 Sum_probs=27.4
Q ss_pred HHHHHHHHHHCCCCCCCCCEEEEEE-----EEECCCCCCCCCCCCCC
Q ss_conf 9999998643013222344258843-----10023688743221121
Q gi|254780489|r 59 IQAGDIALRNANIKKDSISLTLLAT-----STPDHLLPPSSPLITHR 100 (325)
Q Consensus 59 ~~Aa~~aL~~a~~~~~dId~ii~~s-----~t~d~~~P~~a~~v~~~ 100 (325)
..|.++||+.-+++|+++ +|++. -||.|.--+..+-+|.|
T Consensus 13 L~AL~~AL~EL~LdP~qv--vVVSGIGCS~ktPhY~n~~g~h~LHGR 57 (302)
T TIGR02177 13 LSALQKALAELNLDPEQV--VVVSGIGCSAKTPHYVNVNGFHGLHGR 57 (302)
T ss_pred HHHHHHHHHHHCCCCCCE--EEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 999999998628898527--998131311347730013664523356
No 279
>TIGR02651 RNase_Z ribonuclease Z; InterPro: IPR013471 All tRNA molecules are synthesised as long precursors with extra sequence at both the 5' and 3' ends, which undergo several processing steps to form the mature tRNA molecule. In many bacteria the tRNA precursors do not contain the CCA sequence which forms the 3' end of the mature tRNA and is essential for aminoacylation. In these organisms ribonucleotide Z cleaves the precursor to form a 3' end to which CCA is added. Species where all tRNA sequences already have the CCA tail, such as E. coli, do not generally posses this form of ribonuclease Z. ; GO: 0016891 endoribonuclease activity producing 5'-phosphomonoesters, 0042779 removal of tRNA 3'-trailer sequence.
Probab=46.91 E-value=8.7 Score=18.47 Aligned_cols=68 Identities=21% Similarity=0.194 Sum_probs=46.4
Q ss_pred CEEEEEEEEECCCCCC-CHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
Q ss_conf 2099999973588613-888999880999768311147508899489887999999999998643013222344258843
Q gi|254780489|r 5 SSCILGFGHAVPNQCI-HNSIIERHLNLKLGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTLLAT 83 (325)
Q Consensus 5 ~~~I~g~g~~lP~~~i-~n~~l~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s 83 (325)
.+.|+|||.-+|.... ...-+.+ +.++ ..++...|-+|-+ +.=|.++++.|.+||.|.-.+
T Consensus 1 ~i~fLGTGg~~Pt~~Rn~~si~l~---~~~e-------~g~~~LFDCGEGT--------Q~Q~~~~~~~~~~i~~IFITH 62 (327)
T TIGR02651 1 EITFLGTGGGVPTKERNVSSIALK---LEDE-------RGELWLFDCGEGT--------QRQMLRSGISPMKIDRIFITH 62 (327)
T ss_pred CEEEEECCCCCCCCCCCCCEEEEE---CHHH-------CCCEEEEECCCHH--------HHHHHHCCCCCCCCCEEEEEC
T ss_conf 958985277887756477589996---0224-------2874255477189--------999997168863111368706
Q ss_pred EEECCCC
Q ss_conf 1002368
Q gi|254780489|r 84 STPDHLL 90 (325)
Q Consensus 84 ~t~d~~~ 90 (325)
.-+|+.+
T Consensus 63 ~HGDHi~ 69 (327)
T TIGR02651 63 LHGDHIL 69 (327)
T ss_pred CCHHHHH
T ss_conf 6314554
No 280
>TIGR01418 PEP_synth phosphoenolpyruvate synthase; InterPro: IPR006319 This family represents phosphoenolpyruvate synthase; also called pyruvate,water dikinase and PEP synthase. The member from Methanococcus jannaschii contains a large intein. This enzyme generates phosphoenolpyruvate (PEP) from pyruvate, hydrolyzing ATP to AMP and releasing inorganic phosphate in the process. The enzyme shows extensive homology to other enzymes that use PEP as substrate or product. This enzyme may provide PEP for gluconeogenesis, for PTS-type carbohydrate transport systems, or for other processes. ; GO: 0008986 pyruvate water dikinase activity, 0006094 gluconeogenesis.
Probab=45.91 E-value=6.6 Score=19.25 Aligned_cols=32 Identities=19% Similarity=0.433 Sum_probs=18.4
Q ss_pred CCCCCCCCEEEEEEEEECCCCC----------------CCCCCCCCCCCCC
Q ss_conf 1322234425884310023688----------------7432211210023
Q gi|254780489|r 70 NIKKDSISLTLLATSTPDHLLP----------------PSSPLITHRLGLM 104 (325)
Q Consensus 70 ~~~~~dId~ii~~s~t~d~~~P----------------~~a~~v~~~Lg~~ 104 (325)
.+.+-|| |+.--++||+ .| |+|+.|+++||+|
T Consensus 426 ~~~~Gdi--LVT~mTDPDW-eP~MK~AsAIVTn~GG~TcHAAIVaRELGiP 473 (877)
T TIGR01418 426 KFEEGDI--LVTDMTDPDW-EPVMKRASAIVTNEGGRTCHAAIVARELGIP 473 (877)
T ss_pred CCCCCCE--EEECCCCCCC-HHHCCCCCEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 4388646--8757874281-2122130304707887500899998755888
No 281
>pfam09887 DUF2114 Uncharacterized protein conserved in archaea (DUF2114). This domain, found in various hypothetical archaeal proteins, has no known function.
Probab=45.58 E-value=14 Score=17.09 Aligned_cols=41 Identities=12% Similarity=0.220 Sum_probs=31.4
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCC-CCCEEEEEE-EEECCCCC
Q ss_conf 887999999999998643013222-344258843-10023688
Q gi|254780489|r 51 HETLTDIAIQAGDIALRNANIKKD-SISLTLLAT-STPDHLLP 91 (325)
Q Consensus 51 ~e~~~~la~~Aa~~aL~~a~~~~~-dId~ii~~s-~t~d~~~P 91 (325)
.|+.++|--....+++++|+++.+ |+|.|+-+| ++..+..|
T Consensus 64 resV~elVrdtl~e~~k~A~l~i~~DL~FVVRSTGVvAgf~sp 106 (448)
T pfam09887 64 RESVAELVRDTLLESLKKAGLDIENDLDFVVRSTGVVAGFDSP 106 (448)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEECCCCH
T ss_conf 8899999999999999973888655766799506444056897
No 282
>pfam00862 Sucrose_synth Sucrose synthase. Sucrose synthases catalyse the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534.
Probab=44.93 E-value=18 Score=16.34 Aligned_cols=35 Identities=14% Similarity=0.336 Sum_probs=14.6
Q ss_pred HHHHHHHHHCCCCCCCCEEEECCCCCHHHH-HHHHHCCC
Q ss_conf 789889974012001224630565413899-99997197
Q gi|254780489|r 233 SAKQSLRKSDLQPQDINRFIPHQANSRIIQ-KVCEKIGL 270 (325)
Q Consensus 233 ~i~~~l~~~gl~~~did~~i~Hq~~~~~~~-~~~~~lgi 270 (325)
+.++.+++.+=.| |.+|-+...+.+.. .++++||+
T Consensus 390 a~~ei~~el~g~P---DLIIGNYSDGNLVAsLla~klgV 425 (550)
T pfam00862 390 VASEIAAELQAKP---DLIIGNYSDGNLVASLLAHKLGV 425 (550)
T ss_pred HHHHHHHHHCCCC---CEEEECCCCCHHHHHHHHHHCCC
T ss_conf 9999999848998---87984177722999999865387
No 283
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=44.82 E-value=23 Score=15.77 Aligned_cols=53 Identities=8% Similarity=0.125 Sum_probs=37.3
Q ss_pred CHHHHHHHHHHHHCCCCCCCCEEEECCCC---------CHHHHHHHHHCCCCHHHHHHHHHHC
Q ss_conf 00367898899740120012246305654---------1389999997197865700218540
Q gi|254780489|r 229 IMAQSAKQSLRKSDLQPQDINRFIPHQAN---------SRIIQKVCEKIGLSKRIMVNSLKDF 282 (325)
Q Consensus 229 ~~~~~i~~~l~~~gl~~~did~~i~Hq~~---------~~~~~~~~~~lgi~~~~~~~~l~~~ 282 (325)
.+...+...|++.|...++| +++||.+. ..|++.+.+..+++.++++.+-++.
T Consensus 71 ~~~~~m~~~l~~~gv~id~i-~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~ 132 (181)
T COG0241 71 KLHNKMLKILASQGVKIDGI-LYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRL 132 (181)
T ss_pred HHHHHHHHHHHHCCCCCCEE-EECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCH
T ss_conf 89999999999749703649-987889877776669975899999998288822017840768
No 284
>TIGR01371 met_syn_B12ind 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; InterPro: IPR006276 This group represents cobalamin-independent methionine synthase. A family of uncharacterised archaeal proteins having substantial homology to the C-terminal region of this family, are not included in this group, though they are contained in a larger family of vitamin-B12 independent methionine synthase.; GO: 0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, 0009086 methionine biosynthetic process.
Probab=44.71 E-value=23 Score=15.76 Aligned_cols=10 Identities=20% Similarity=0.421 Sum_probs=4.1
Q ss_pred HHHHHHHHHC
Q ss_conf 3899999971
Q gi|254780489|r 259 RIIQKVCEKI 268 (325)
Q Consensus 259 ~~~~~~~~~l 268 (325)
-|.+.+.|+|
T Consensus 512 DMVEYFGE~L 521 (778)
T TIGR01371 512 DMVEYFGEKL 521 (778)
T ss_pred CHHHHHHHHH
T ss_conf 3368888721
No 285
>pfam03702 UPF0075 Uncharacterized protein family (UPF0075). The proteins is this family are about 370 amino acids long and have no known function.
Probab=43.06 E-value=24 Score=15.60 Aligned_cols=62 Identities=21% Similarity=0.173 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCC----------CCCCCCCCCCCCCCC---CCCCCCCCCCCC
Q ss_conf 999999999864301322234425884310023688----------743221121002386---333421012310
Q gi|254780489|r 56 DIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLP----------PSSPLITHRLGLMQS---GAIDLTGACAGF 118 (325)
Q Consensus 56 ~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P----------~~a~~v~~~Lg~~~~---~~~di~~~C~g~ 118 (325)
..-.+|+++.|.+++++++|||+|=++.-|- +..| +.+..|++++|++-+ ..-|+..|--|.
T Consensus 68 ~~~a~ai~~~i~~~~~~~~~Id~Ig~HGQTi-~H~P~~~~~~TlQiG~~~~iA~~tgi~VV~DFR~~Dia~GGqGA 142 (363)
T pfam03702 68 LLFADAVNELLQKQNLKPSQIRAIGCHGQTV-RHEPNGRFPFTMQIGDPNLIAERTGITVVADFRRRDVAAGGQGA 142 (363)
T ss_pred HHHHHHHHHHHHHCCCCCCCEEEEECCCCEE-EECCCCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHHCCCCCC
T ss_conf 9999999999998399820224895588605-77889999644663979999788699773876633776689899
No 286
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=42.97 E-value=11 Score=17.69 Aligned_cols=117 Identities=16% Similarity=0.242 Sum_probs=48.1
Q ss_pred EEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEE--ECCCCCCCCC--CCCCCCCCCC-CCCCC
Q ss_conf 31114750889948988799999999999864301322234425884310--0236887432--2112100238-63334
Q gi|254780489|r 36 IEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTLLATST--PDHLLPPSSP--LITHRLGLMQ-SGAID 110 (325)
Q Consensus 36 i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t--~d~~~P~~a~--~v~~~Lg~~~-~~~~d 110 (325)
|.+..|.+-++|.=-+...-.+-.+.--..|+++ ...+| |+.+.|+ |--.-|+.+- .|.+-+.-++ .+.||
T Consensus 136 If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a--~~~~v--vLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D 211 (396)
T COG1448 136 IFEAAGLEVETYPYYDAETKGLDFDGMLADLKTA--PEGSV--VLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFD 211 (396)
T ss_pred HHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHC--CCCCE--EEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE
T ss_conf 9996698145310354666642579999999737--89988--9983677898899999999999999999769823663
Q ss_pred CCCCCCCCHHHHHH---HHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 21012310125676---57887438850588620122444462224434325442001122
Q gi|254780489|r 111 LTGACAGFLYALVM---ADSYINSHQKPVLIIAANLLSRRINLEDKDTAIIFGDAAGAVVL 168 (325)
Q Consensus 111 i~~~C~g~l~aL~~---A~~~i~~g~~~vLVv~~e~~S~~~d~~d~~~~~lfGDgA~A~il 168 (325)
+. --||-.+|+. +-+++.......+|+.+ +|+.+ -++|+=.+|..+
T Consensus 212 ~A--YQGF~~GleeDa~~lR~~a~~~~~~lva~S--~SKnf--------gLYgERVGa~~v 260 (396)
T COG1448 212 IA--YQGFADGLEEDAYALRLFAEVGPELLVASS--FSKNF--------GLYGERVGALSV 260 (396)
T ss_pred HH--HHHHCCCHHHHHHHHHHHHHHCCCEEEEEH--HHHHH--------HHHHHCCCEEEE
T ss_conf 24--444212467789999999972985899710--00124--------434300231588
No 287
>TIGR00417 speE spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (), spermine synthase () and putrescine N-methyltransferase () . The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain . The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) . ; GO: 0003824 catalytic activity.
Probab=42.89 E-value=15 Score=16.93 Aligned_cols=54 Identities=4% Similarity=0.027 Sum_probs=22.6
Q ss_pred CHHHHHHHHHHHHCCCCCC-CCEEEECCCCCHHHHHHHHHCCCCHHHHH-HHHHHC
Q ss_conf 0036789889974012001-22463056541389999997197865700-218540
Q gi|254780489|r 229 IMAQSAKQSLRKSDLQPQD-INRFIPHQANSRIIQKVCEKIGLSKRIMV-NSLKDF 282 (325)
Q Consensus 229 ~~~~~i~~~l~~~gl~~~d-id~~i~Hq~~~~~~~~~~~~lgi~~~~~~-~~l~~~ 282 (325)
..-+.++++|...|+=... =+-.++|+--.+=+...++..++|.-..+ ..++.|
T Consensus 176 ~Fy~~~~~aL~~~Gv~v~Qss~s~~~~~~~~~d~~r~~~~~~F~~~~~y~~~iPTY 231 (284)
T TIGR00417 176 EFYELLKKALNEDGVIVAQSSESPWLQLELIKDLKRKVKEVPFPITEYYTAAIPTY 231 (284)
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCC
T ss_conf 99999998529998899802788432748888788877526897530466407865
No 288
>pfam06406 StbA StbA protein. This family consists of several bacterial StbA plasmid stability proteins.
Probab=42.50 E-value=21 Score=16.04 Aligned_cols=30 Identities=17% Similarity=0.224 Sum_probs=24.9
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCEEEE
Q ss_conf 879999999999986430132223442588
Q gi|254780489|r 52 ETLTDIAIQAGDIALRNANIKKDSISLTLL 81 (325)
Q Consensus 52 e~~~~la~~Aa~~aL~~a~~~~~dId~ii~ 81 (325)
..-+++..-++.-||.++|+.|.+|+++..
T Consensus 72 yq~s~~N~l~vhHAL~~aGl~~~~V~lvvg 101 (318)
T pfam06406 72 YQYSDVNVLAIHHALLTSGLVPQPVDLVVT 101 (318)
T ss_pred CCCCHHHHHHHHHHHHHCCCCCCEEEEEEC
T ss_conf 575367899999999972889870589965
No 289
>TIGR01485 SPP_plant-cyano sucrose phosphatase; InterPro: IPR012847 This entry describes the sucrose phosphate phosphohydrolase from plants and cyanobacteria (SPP). However, a closely related group of sequences from bacteria and archaea may prove to catalyze the same reaction. SPP is a member of the Class IIB subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain, which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain..
Probab=42.39 E-value=25 Score=15.53 Aligned_cols=40 Identities=20% Similarity=0.483 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHCCCC-------CCCCEEEECCCCC-HHHHHHHHHCCC
Q ss_conf 0367898899740120-------0122463056541-389999997197
Q gi|254780489|r 230 MAQSAKQSLRKSDLQP-------QDINRFIPHQANS-RIIQKVCEKIGL 270 (325)
Q Consensus 230 ~~~~i~~~l~~~gl~~-------~did~~i~Hq~~~-~~~~~~~~~lgi 270 (325)
+-+.+.+.|++.|+.. .|+| ++||-+++ ..+..+.++|.+
T Consensus 137 V~~~L~~~L~~~g~~vk~iYSsG~dlD-ilP~~s~KG~A~~YL~~kL~~ 184 (257)
T TIGR01485 137 VIKQLEEELKKSGLDVKLIYSSGKDLD-ILPQGSGKGQALQYLLQKLKI 184 (257)
T ss_pred HHHHHHHHHHHCCCCEEEEEECCEEEE-EECCCCCHHHHHHHHHHHHHH
T ss_conf 999899888742897589975882377-502778856799999999984
No 290
>PRK09206 pyruvate kinase; Provisional
Probab=42.25 E-value=25 Score=15.52 Aligned_cols=30 Identities=27% Similarity=0.288 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHCCCCCCCEEEEEEE---CCCCC
Q ss_conf 9999999998067899989999986---15510
Q gi|254780489|r 290 IPLSLSLENQRKPFQKGEKILTISC---RRGND 319 (325)
Q Consensus 290 i~~~L~~~~~~g~i~~Gd~vll~~~---G~G~s 319 (325)
+-.+...+.+.|.+++||+|++++- |+|.|
T Consensus 430 ~~~~~~~~~~~g~~~~GD~vVv~~G~~~~~G~T 462 (470)
T PRK09206 430 YRLGKELALQSGLAQKGDVVVMVSGALVPSGTT 462 (470)
T ss_pred HHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC
T ss_conf 999999999869989989899977777899877
No 291
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=41.51 E-value=25 Score=15.45 Aligned_cols=22 Identities=0% Similarity=-0.058 Sum_probs=12.2
Q ss_pred EEEEEEECCCCCCCHHHHHHHHCC
Q ss_conf 999997358861388899988099
Q gi|254780489|r 8 ILGFGHAVPNQCIHNSIIERHLNL 31 (325)
Q Consensus 8 I~g~g~~lP~~~i~n~~l~~~~~~ 31 (325)
|.++-.|.|... .+++.++.+.
T Consensus 16 i~~l~pY~~~~~--~~~~~~~~~~ 37 (374)
T PRK05166 16 VRSLPPYNAGLT--IEEVRARYHV 37 (374)
T ss_pred HCCCCCCCCCCC--HHHHHHHHCC
T ss_conf 447899999998--6999987389
No 292
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=41.17 E-value=24 Score=15.55 Aligned_cols=27 Identities=7% Similarity=0.278 Sum_probs=12.2
Q ss_pred HHHHHHHHHHCCCCCCCCEEEECCCCC
Q ss_conf 678988997401200122463056541
Q gi|254780489|r 232 QSAKQSLRKSDLQPQDINRFIPHQANS 258 (325)
Q Consensus 232 ~~i~~~l~~~gl~~~did~~i~Hq~~~ 258 (325)
..++++|++++++++|||.+++.=++-
T Consensus 317 ~~i~~aL~~a~l~~~dId~ViLVGGsT 343 (657)
T PTZ00009 317 QPVEKVLQDAKMDKRSVHDVVLVGGST 343 (657)
T ss_pred HHHHHHHHHHCCCHHHEEEEEECCCCC
T ss_conf 999999997379952514999808814
No 293
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=40.83 E-value=26 Score=15.38 Aligned_cols=49 Identities=18% Similarity=0.230 Sum_probs=31.5
Q ss_pred CCHHHHHHH----HHHCCCC---CCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCC
Q ss_conf 786570021----8540933---000599999999980678999899999861551
Q gi|254780489|r 270 LSKRIMVNS----LKDFGNS---SSASIPLSLSLENQRKPFQKGEKILTISCRRGN 318 (325)
Q Consensus 270 i~~~~~~~~----l~~~GN~---~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~G~ 318 (325)
++.+..... .++.|-. +++..+-++.++.+++.+.+|++|+++-.|+|+
T Consensus 267 V~d~e~~~a~~~l~~~egi~vepssg~~lAa~~~~~~~~~~~~~~~Vv~il~G~G~ 322 (324)
T cd01563 267 VSDEEILEAQKLLARTEGIFVEPASAASLAGLKKLREEGIIDKGERVVVVLTGHGL 322 (324)
T ss_pred ECHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
T ss_conf 89999999999999982974527999999999999984799972989999698988
No 294
>pfam00012 HSP70 Hsp70 protein. Hsp70 chaperones help to fold many proteins. Hsp70 assisted folding involves repeated cycles of substrate binding and release. Hsp70 activity is ATP dependent. Hsp70 proteins are made up of two regions: the amino terminus is the ATPase domain and the carboxyl terminus is the substrate binding region.
Probab=40.64 E-value=26 Score=15.36 Aligned_cols=57 Identities=16% Similarity=0.207 Sum_probs=38.5
Q ss_pred CHHHHHHHC----CCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHH---HHHHHHHCCCCHHHH
Q ss_conf 145434320----100367898899740120012246305654138---999999719786570
Q gi|254780489|r 219 GADIFYNAV----KIMAQSAKQSLRKSDLQPQDINRFIPHQANSRI---IQKVCEKIGLSKRIM 275 (325)
Q Consensus 219 g~~v~~~~~----~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~---~~~~~~~lgi~~~~~ 275 (325)
.|+-|+..+ ..+...++++|+++|++++|||.+++.=++-+| .+.+.+.+|.+..+.
T Consensus 293 tR~eFE~l~~~l~~r~~~~i~~~L~~a~l~~~dId~ViLvGGssRiP~Vq~~l~~~fg~~~~~~ 356 (598)
T pfam00012 293 TRAKFEELCADLFERTLEPVEKALKDAKLSKSEIDEVVLVGGSTRIPAVQELVKEFFGKEPSKT 356 (598)
T ss_pred EHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCHHHHHHHHHHHCCCCCCC
T ss_conf 7999999999999999999987898728995451257861886567689999999868996668
No 295
>cd06188 NADH_quinone_reductase Na+-translocating NADH:quinone oxidoreductase (Na+-NQR) FAD/NADH binding domain. (Na+-NQR) provides a means of storing redox reaction energy via the transmembrane translocation of Na2+ ions. The C-terminal domain resembles ferredoxin:NADP+ oxidoreductase, and has NADH and FAD binding sites. (Na+-NQR) is distinct from H+-translocating NADH:quinone oxidoreductases and noncoupled NADH:quinone oxidoreductases. The NAD(P) binding domain of ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding domain of the alpha/beta class and a discrete (usually N-terminal) domain which vary in orientation with respect to the NAD(P) binding domain. The N-terminal domain of this group typically contains an iron-sulfur cluster binding domain.
Probab=40.59 E-value=26 Score=15.35 Aligned_cols=44 Identities=16% Similarity=0.249 Sum_probs=27.7
Q ss_pred HHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHH---CCCCHHHHHH
Q ss_conf 678988997401200122463056541389999997---1978657002
Q gi|254780489|r 232 QSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEK---IGLSKRIMVN 277 (325)
Q Consensus 232 ~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~---lgi~~~~~~~ 277 (325)
+.+.+.+.+....++|.+.++| +...|++++.+. +|+|++++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~vYlC--GPp~Mv~a~~~~L~~~Gv~~~~I~~ 280 (283)
T cd06188 234 QVLLENYLKKHPAPEDIEFYLC--GPPPMNSAVIKMLDDLGVPRENIAF 280 (283)
T ss_pred HHHHHHHHHHCCCCCCCEEEEE--CCHHHHHHHHHHHHHCCCCHHHEEE
T ss_conf 8999999964899678799994--9899999999999985998899573
No 296
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=40.49 E-value=26 Score=15.35 Aligned_cols=20 Identities=10% Similarity=0.067 Sum_probs=11.6
Q ss_pred EEEEEEEEECCCCCCCHHHH
Q ss_conf 09999997358861388899
Q gi|254780489|r 6 SCILGFGHAVPNQCIHNSII 25 (325)
Q Consensus 6 ~~I~g~g~~lP~~~i~n~~l 25 (325)
-.|..+.-|.|.+.-.-+++
T Consensus 7 p~i~~l~pY~~~~~~~~~~i 26 (353)
T PRK05387 7 PIVRQLEPYVPGEQPKLANL 26 (353)
T ss_pred CCCCCCCCCCCCCCCCCCCE
T ss_conf 44346899999876799984
No 297
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=40.32 E-value=24 Score=15.64 Aligned_cols=33 Identities=12% Similarity=0.186 Sum_probs=12.5
Q ss_pred HHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 4301322234425884310023688743221121002
Q gi|254780489|r 67 RNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGL 103 (325)
Q Consensus 67 ~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~ 103 (325)
+.+++.+.|- .+|.+.+.+ .-..+..+++.+|+
T Consensus 98 ~~~~i~~g~~-VlI~gg~G~---vG~~aiqlak~~Ga 130 (288)
T smart00829 98 DLARLRPGES-VLIHAAAGG---VGQAAIQLAQHLGA 130 (288)
T ss_pred HHCCCCCCCE-EEEECCCCH---HHHHHHHHHHHCCC
T ss_conf 7508899999-999789867---77999999997398
No 298
>pfam01890 CbiG_C Cobalamin synthesis G C-terminus. Members of this family are involved in cobalamin synthesis. A member from Synechocystis sp. PCC 6803 has been designated cbiH but in fact represents a fusion between cbiH and cbiG. As other multi-functional proteins involved in cobalamin biosynthesis catalyse adjacent steps in the pathway, including CysG, CobL (CbiET), CobIJ and CobA-HemD, it is therefore possible that CbiG catalyses a reaction step adjacent to CbiH. In the anaerobic pathway such a step could be the formation of a gamma lactone, which is thought to help to mediate the anaerobic ring contraction process. Within the cobalamin synthesis pathway CbiG catalyses the both the opening of the lactone ring and the extrusion of the two-carbon fragment of cobalt-precorrin-5A from C-20 and its associated methyl group (deacylation) to give cobalt-precorrin-5B. This family is the C-terminal region, and the mid- and N-termival parts are conserved independently in other families.
Probab=38.71 E-value=28 Score=15.17 Aligned_cols=42 Identities=12% Similarity=0.360 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEECC--CCCHHHHHHHHHCCCC
Q ss_conf 03678988997401200122463056--5413899999971978
Q gi|254780489|r 230 MAQSAKQSLRKSDLQPQDINRFIPHQ--ANSRIIQKVCEKIGLS 271 (325)
Q Consensus 230 ~~~~i~~~l~~~gl~~~did~~i~Hq--~~~~~~~~~~~~lgi~ 271 (325)
+...+.++|++.++++++|+.+.... .+..-+..+++.+|+|
T Consensus 17 i~~~i~~~l~~~~l~~~~i~~iasid~K~~E~gl~~~a~~l~~p 60 (121)
T pfam01890 17 IEAAIEEALAEAGLSPEAVAAIATIDLKADEPGLLELAARLGVP 60 (121)
T ss_pred HHHHHHHHHHHCCCCHHHCCEEEEEECCCCCHHHHHHHHHHCCC
T ss_conf 99999999998599978840568632147988999999992998
No 299
>TIGR01393 lepA GTP-binding protein LepA; InterPro: IPR006297 LepA (GUF1 in Saccaromyces) is a GTP-binding membrane protein related to EF-G and EF-Tu. Two types of phylogenetic tree, rooted by other GTP-binding proteins, suggest that eukaryotic homologs (including GUF1 of yeast) originated within the bacterial LepA family. The function of the proteins in this family are unknown. ; GO: 0005525 GTP binding.
Probab=38.07 E-value=18 Score=16.34 Aligned_cols=76 Identities=17% Similarity=0.200 Sum_probs=35.6
Q ss_pred CCCCCEE-EEEEEEECCCCCCCHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 9666209-999997358861388899988099976831114750889948988799999999999864301322234425
Q gi|254780489|r 1 MIKSSSC-ILGFGHAVPNQCIHNSIIERHLNLKLGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLT 79 (325)
Q Consensus 1 M~~~~~~-I~g~g~~lP~~~i~n~~l~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~i 79 (325)
|-..+.| +..+|...|+-.+..++|.. | ..|||. .|||+-.=+.=+.|. +.+-.=|+++| .|..+ +--+
T Consensus 227 Mstgk~y~V~evG~~~P~~~~~~~~L~a--G-eVGy~~--AgIK~v~D~~VGDTi-T~~~~Pa~epl--pGF~~--~KP~ 296 (598)
T TIGR01393 227 MSTGKEYEVDEVGVFTPKLEVKTQELSA--G-EVGYII--AGIKDVSDVKVGDTI-TSVKNPAKEPL--PGFKE--VKPM 296 (598)
T ss_pred EECCCEEEEEEEEEECCCCCCCCCCEEC--C-CEEEEE--EEEEECCCEECCCEE-ECCCCCCCCCC--CCCCC--CCCE
T ss_conf 5348766675500343452014662001--6-305999--865310411205445-25678737678--88612--5765
Q ss_pred EEEEEEE
Q ss_conf 8843100
Q gi|254780489|r 80 LLATSTP 86 (325)
Q Consensus 80 i~~s~t~ 86 (325)
+||+..|
T Consensus 297 VFaGlYP 303 (598)
T TIGR01393 297 VFAGLYP 303 (598)
T ss_pred EEECCCC
T ss_conf 8601258
No 300
>KOG1015 consensus
Probab=37.97 E-value=20 Score=16.13 Aligned_cols=90 Identities=14% Similarity=0.227 Sum_probs=45.2
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEE------EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 750889948988799999999999864301322234425884------31002368874322112100238633342101
Q gi|254780489|r 41 GIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTLLA------TSTPDHLLPPSSPLITHRLGLMQSGAIDLTGA 114 (325)
Q Consensus 41 GI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~------s~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~ 114 (325)
+|..-++.++++.+..-+++.-|..+.+ +.|.+++-|=|- |...-.-.|+..|++++-+|+... |.|
T Consensus 641 ~it~~lVld~deet~e~~VqV~rslv~k--LKpHQv~GvqFMwd~~~eSlkr~~~~~GsGcILAHcMGLGKT--lQV--- 713 (1567)
T KOG1015 641 PITTKLVLDEDEETKEPLVQVHRSLVIK--LKPHQVDGVQFMWDCCCESLKRTKKSPGSGCILAHCMGLGKT--LQV--- 713 (1567)
T ss_pred CCCEEEEECCHHHHCCCHHHCCHHHHHH--CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCE--EHH---
T ss_conf 5310378544143042202145767764--472201302589999999988612799863177875045640--014---
Q ss_pred CCCCHHHHHHHHHHHHCCCCEEEEEEE
Q ss_conf 231012567657887438850588620
Q gi|254780489|r 115 CAGFLYALVMADSYINSHQKPVLIIAA 141 (325)
Q Consensus 115 C~g~l~aL~~A~~~i~~g~~~vLVv~~ 141 (325)
-.|++-+-++ .+.|-++||||+.
T Consensus 714 -vtflhTvL~c---~klg~ktaLvV~P 736 (1567)
T KOG1015 714 -VTFLHTVLLC---DKLGFKTALVVCP 736 (1567)
T ss_pred -HHHHHHHHHH---HCCCCCEEEEECC
T ss_conf -6788899874---2047856899723
No 301
>cd06449 ACCD Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of 1-aminocyclopropane-L-carboxylate (ACC), a precursor of the plant hormone ethylene, to alpha-ketobutyrate and ammonia.
Probab=37.54 E-value=29 Score=15.05 Aligned_cols=30 Identities=17% Similarity=0.131 Sum_probs=24.8
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCEEEEEEEC
Q ss_conf 000599999999980678999899999861
Q gi|254780489|r 286 SSASIPLSLSLENQRKPFQKGEKILTISCR 315 (325)
Q Consensus 286 ~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G 315 (325)
.++-.+..|.+++++|++++|++|+++=.|
T Consensus 277 YTgKa~~gl~~~i~~g~~~~~~~IlfiHTG 306 (307)
T cd06449 277 YEGKSMQGMIDLVRNGEFKEGSKVLFIHLG 306 (307)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEEECC
T ss_conf 789999999999986999997918999599
No 302
>PRK13929 rod-share determining protein MreBH; Provisional
Probab=37.32 E-value=18 Score=16.48 Aligned_cols=71 Identities=8% Similarity=0.086 Sum_probs=38.2
Q ss_pred CCCHHHHHHHHHHHH--CCCCCCCCE-EEECCCCCHH---HHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 010036789889974--012001224-6305654138---99999971978657002185409330005999999999
Q gi|254780489|r 227 VKIMAQSAKQSLRKS--DLQPQDINR-FIPHQANSRI---IQKVCEKIGLSKRIMVNSLKDFGNSSSASIPLSLSLEN 298 (325)
Q Consensus 227 ~~~~~~~i~~~l~~~--gl~~~did~-~i~Hq~~~~~---~~~~~~~lgi~~~~~~~~l~~~GN~~sAsi~~~L~~~~ 298 (325)
+..+.+.++++|+++ .+..+.+|. ++..=++.++ .+.+.+.+|+|.....+ -.+.==.|+|-..=.++.+.
T Consensus 255 ~~~i~~~i~~~L~~~~pel~~di~d~gIvLvGG~srip~i~~~l~~~~~~~v~~~~n-P~~~Va~GAa~~~~~i~~~~ 331 (335)
T PRK13929 255 LLHILEAIRATLEDCPPELSGDIVDRGVILTGGGALLNGIKEWLSQEIVVPVHVAAN-PLESVAIGTGRSLEVIDKLQ 331 (335)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCC-HHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999838843325432782999774043267999999997819877988-67679998999997699999
No 303
>TIGR02362 dhaK1b probable dihydroxyacetone kinase DhaK1b subunit; InterPro: IPR012735 Two types of dihydroxyacetone kinase (glycerone kinase) are described. In yeast and a few bacteria, e.g. Citrobacter freundii, the enzyme is a single chain that uses ATP as phosphoryl donor and is designated 2.7.1.29 from EC. By contract, Escherichia coli and many other bacterial species have a multisubunit form with a phosphoprotein donor related to PTS transport proteins. This family represents a protein, unique to the firmicutes (low GC Gram-positives), that appears to be a divergent second copy of the K subunit of that complex; its gene is always found in operons with the other three proteins of the complex..
Probab=37.16 E-value=19 Score=16.27 Aligned_cols=74 Identities=18% Similarity=0.199 Sum_probs=43.4
Q ss_pred CCCCCCCCCEE----EEEEEEECCCCCCCCCCCCCCCCC-C-CCCCCCC----CCCCCCCHHHHHHHHHHHHCCCCEEEE
Q ss_conf 01322234425----884310023688743221121002-3-8633342----101231012567657887438850588
Q gi|254780489|r 69 ANIKKDSISLT----LLATSTPDHLLPPSSPLITHRLGL-M-QSGAIDL----TGACAGFLYALVMADSYINSHQKPVLI 138 (325)
Q Consensus 69 a~~~~~dId~i----i~~s~t~d~~~P~~a~~v~~~Lg~-~-~~~~~di----~~~C~g~l~aL~~A~~~i~~g~~~vLV 138 (325)
+|++|.-.++| +.|-..+|-+.|++|..|-+.+.- . .-..|=| ..--..|++|.++|+. -|..-.+|
T Consensus 52 SGHePAH~GYVG~GML~AAi~G~vF~PP~A~~il~~~r~~~~gkGVf~IiKNF~AD~~~F~~A~~qar~---EG~~~~~~ 128 (328)
T TIGR02362 52 SGHEPAHLGYVGEGMLSAAIMGDVFVPPTAQDILEAIRQVDRGKGVFVIIKNFEADLSEFSQAIEQARQ---EGRDIKYI 128 (328)
T ss_pred CCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHH---CCCCEEEE
T ss_conf 876667665203004333100674799985899999987524976899971767778999999999986---38950379
Q ss_pred EEECCCC
Q ss_conf 6201224
Q gi|254780489|r 139 IAANLLS 145 (325)
Q Consensus 139 v~~e~~S 145 (325)
|+.|-.|
T Consensus 129 iv~DDiS 135 (328)
T TIGR02362 129 IVHDDIS 135 (328)
T ss_pred EECCCCC
T ss_conf 9727533
No 304
>TIGR02478 6PF1K_euk 6-phosphofructokinase; InterPro: IPR009161 Members of this family are eukaryotic (with one exception) ATP-dependent 6-phosphofructokinases (2.7.1.11 from EC) in which two tandem copies of the phosphofructokinase are found . Members are found, often including several isozymes, in animals and fungi and in the bacterium Propionibacterium acnes KPA171202 (a human skin commensal). Phosphofructokinase (PFK) catalyses the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate, which then enters the Embden-Meyerhof pathway. PFK is a key regulatory enzyme in glycolysis. For additional information please see , , .; GO: 0003872 6-phosphofructokinase activity, 0006096 glycolysis, 0005737 cytoplasm.
Probab=37.12 E-value=29 Score=15.01 Aligned_cols=62 Identities=13% Similarity=0.057 Sum_probs=31.2
Q ss_pred CCEEEEEEEEECC-CCCCCHHHHHHHHCCCHHHEEECCCCCEE-----EEECCC-------CCHHHHHHHHHHHHHHHCC
Q ss_conf 6209999997358-86138889998809997683111475088-----994898-------8799999999999864301
Q gi|254780489|r 4 SSSCILGFGHAVP-NQCIHNSIIERHLNLKLGVIEQKTGIKYR-----YWAEKH-------ETLTDIAIQAGDIALRNAN 70 (325)
Q Consensus 4 ~~~~I~g~g~~lP-~~~i~n~~l~~~~~~~~~~i~~~tGI~~R-----~~~~~~-------e~~~~la~~Aa~~aL~~a~ 70 (325)
.++.|++=|+-=- .++||.+++=+. |.++.++.+| ||=.-+ -=++-|+++|.+..|+.
T Consensus 243 ~~iViVAEGA~D~~~~pItse~VK~v-------l~~~L~lDtRiT~LGHVQRGG~PsA~DR~Lat~~GvEAV~avL~~-- 313 (777)
T TIGR02478 243 KNIVIVAEGAIDRELNPITSEDVKDV-------LVERLGLDTRITVLGHVQRGGAPSAYDRILATLQGVEAVLAVLES-- 313 (777)
T ss_pred CEEEEEEECEECCCCCCCCHHHHHHH-------HHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC--
T ss_conf 40799842105467779688989888-------644018402476605224688722899999986449999999726--
Q ss_pred CCCCC
Q ss_conf 32223
Q gi|254780489|r 71 IKKDS 75 (325)
Q Consensus 71 ~~~~d 75 (325)
+|+.
T Consensus 314 -tpe~ 317 (777)
T TIGR02478 314 -TPET 317 (777)
T ss_pred -CCCC
T ss_conf -8776
No 305
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed
Probab=37.07 E-value=21 Score=15.96 Aligned_cols=59 Identities=14% Similarity=0.033 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHCCC-CCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 9999999998643013-2223442588431002368874322112100238633342101231012
Q gi|254780489|r 56 DIAIQAGDIALRNANI-KKDSISLTLLATSTPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLY 120 (325)
Q Consensus 56 ~la~~Aa~~aL~~a~~-~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~ 120 (325)
.-|.+|.+++.++.+. +++|.|++|+-.--+-.+ ...+.+.-.+.+.+.||.|-.||+.
T Consensus 5 ~~a~~a~~~l~~~y~~~~~~eaDliIvlGGDGT~L------~a~r~~~~~~~PilGIN~G~lGFL~ 64 (246)
T PRK04761 5 PEAQAALEELVKRYGDVPIEEADVIVALGGDGFML------QTLHRYMNSGKPVYGMNRGTVGFLM 64 (246)
T ss_pred HHHHHHHHHHHHHHCCCCHHHCCEEEEECCCHHHH------HHHHHHHCCCCCEEEEECCCCCCCC
T ss_conf 89999999999985899965799999989879999------9999874149937989779777544
No 306
>cd04493 BRCA2DBD_OB1 BRCA2DBD_OB1: A subfamily of OB folds corresponding to the first OB fold (OB1) of the 800-amino acid C-terminal ssDNA binding domain (DBD) of BRCA2 (breast cancer susceptibility gene 2) protein, called BRCA2DBD. BRCA2 participates in homologous recombination-mediated repair of double-strand DNA breaks. It stimulates the displacement of Replication protein A (RPA), the most abundant eukaryotic ssDNA binding protein. It also facilitates filament formation. Mutations that map throughout the BRCA2 protein are associated with breast cancer susceptibility. BRCA2 is a large nuclear protein and its most conserved region is the C-terminal BRCA2DBD. BRCA2DBD binds ssDNA in vitro, and is composed of five structural domains, three of which are OB folds (OB1, OB2, and OB3). BRCA2DBD OB2 and OB3 are arranged in tandem, and their mode of binding can be considered qualitatively similar to two OB folds of RPA1, DBD-A and DBD-B (the major DBDs of RPA). BRCA2DBD OB1 binds DNA weakly.
Probab=36.32 E-value=30 Score=14.93 Aligned_cols=37 Identities=22% Similarity=0.230 Sum_probs=20.2
Q ss_pred CCCCCCCCCCCHHHHHHH-HHHHHCCC----CEEEEEEECCC
Q ss_conf 334210123101256765-78874388----50588620122
Q gi|254780489|r 108 AIDLTGACAGFLYALVMA-DSYINSHQ----KPVLIIAANLL 144 (325)
Q Consensus 108 ~~di~~~C~g~l~aL~~A-~~~i~~g~----~~vLVv~~e~~ 144 (325)
...++.|..+.-..|+.. ..+++.|. .+..|.++|..
T Consensus 24 ~ieltDGWY~i~a~lD~~L~~~l~~Gkl~vGqKL~i~GA~L~ 65 (100)
T cd04493 24 IIELTDGWYSIRAQLDPPLTNLVRKGKLRVGQKLRICGAELL 65 (100)
T ss_pred EEEEECCCEEEEEECCHHHHHHHHCCCCCCCCEEEEECCEEE
T ss_conf 799954818986872998999998597214758999887864
No 307
>PRK05464 Na(+)-translocating NADH-quinone reductase subunit F; Provisional
Probab=36.18 E-value=31 Score=14.91 Aligned_cols=44 Identities=20% Similarity=0.439 Sum_probs=28.6
Q ss_pred HHHHHHHCCCCCCCCEEEECCCCCHHHHHHH---HHCCCCHHHHHHHHHHCC
Q ss_conf 9889974012001224630565413899999---971978657002185409
Q gi|254780489|r 235 KQSLRKSDLQPQDINRFIPHQANSRIIQKVC---EKIGLSKRIMVNSLKDFG 283 (325)
Q Consensus 235 ~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~---~~lgi~~~~~~~~l~~~G 283 (325)
+..|++. -.++|.++++|-+ ..|++++. +.+|+++|++. +++||
T Consensus 361 ~~yL~dh-~~ped~e~YlCGP--P~Mi~Av~~~L~~lGV~~E~I~--~D~FG 407 (408)
T PRK05464 361 ENYLKDH-PAPEDCEYYMCGP--PMMNAAVIKMLKDLGVEDENIL--LDDFG 407 (408)
T ss_pred HHHHHHC-CCCCCCEEEEECC--HHHHHHHHHHHHHCCCCHHHEE--ECCCC
T ss_conf 9898637-8855868999899--8999999999998699989964--33568
No 308
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones]
Probab=35.61 E-value=22 Score=15.89 Aligned_cols=62 Identities=21% Similarity=0.208 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCC----------CCCCCCCCCCCCCCCCCC---CCCCCCCC
Q ss_conf 9999999999864301322234425884310023688----------743221121002386333---42101231
Q gi|254780489|r 55 TDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLP----------PSSPLITHRLGLMQSGAI---DLTGACAG 117 (325)
Q Consensus 55 ~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P----------~~a~~v~~~Lg~~~~~~~---di~~~C~g 117 (325)
..+-.+|++.+|++-++.|+||+.|.+..-|= +..| ....+++++.|++.+..| |+-.+--|
T Consensus 72 ~~~~a~av~~ll~~~~l~~~~i~~iG~HGQTV-~H~p~~~~~~t~Qlgd~~~iA~~TGi~~v~dfR~~D~a~GGqG 146 (371)
T COG2377 72 ALLHAQAVAALLAEQGLLPRDIRAIGCHGQTV-LHRPPGHAPDTVQLGDGPLIAELTGITVVGDFRRRDMAAGGQG 146 (371)
T ss_pred HHHHHHHHHHHHHHCCCCHHHCCEEECCCCCC-CCCCCCCCCEEEECCCHHHHHHHHCCCCHHHHCCCCCCCCCCC
T ss_conf 99999999999997299977682640478422-5789988880223486377799869764766123344568888
No 309
>COG0013 AlaS Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=35.17 E-value=32 Score=14.81 Aligned_cols=13 Identities=8% Similarity=0.302 Sum_probs=7.2
Q ss_pred CCCCEEEEEEECC
Q ss_conf 9998999998615
Q gi|254780489|r 304 QKGEKILTISCRR 316 (325)
Q Consensus 304 ~~Gd~vll~~~G~ 316 (325)
+.|+.|=++.+|.
T Consensus 651 kY~~~VRVV~ig~ 663 (879)
T COG0013 651 KYGDEVRVVEIGD 663 (879)
T ss_pred CCCCEEEEEEECC
T ss_conf 6798689999899
No 310
>PRK13980 NAD synthetase; Provisional
Probab=34.95 E-value=16 Score=16.74 Aligned_cols=71 Identities=21% Similarity=0.292 Sum_probs=36.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH--------HHHH-------CCCCEEEEEEECCCCCCCCCCCCCCC
Q ss_conf 74322112100238633342101231012567657--------8874-------38850588620122444462224434
Q gi|254780489|r 92 PSSPLITHRLGLMQSGAIDLTGACAGFLYALVMAD--------SYIN-------SHQKPVLIIAANLLSRRINLEDKDTA 156 (325)
Q Consensus 92 ~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~--------~~i~-------~g~~~vLVv~~e~~S~~~d~~d~~~~ 156 (325)
..|..+++.||++. ...||+..+.+|...+.... ..++ ++..+.||+++...|-.. -.-.
T Consensus 73 ~dA~~la~~lgi~~-~~i~I~~~~~~~~~~~~~~~~~~~~NiqaR~Rm~~Ly~~An~~~~lVlgTgNksE~~----~Gy~ 147 (264)
T PRK13980 73 EDALLVAERLGIEY-KVIEITPIVDAFFSAVPDADRLRRGNIMARTRMVLLYDYANRDNRLVLGTSNKSELL----LGYF 147 (264)
T ss_pred HHHHHHHHHHCCCE-EEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHH----HHHC
T ss_conf 99999999869984-998279999999986310006688875898999999998643397765588674798----7210
Q ss_pred CCCCCCEEEEE
Q ss_conf 32544200112
Q gi|254780489|r 157 IIFGDAAGAVV 167 (325)
Q Consensus 157 ~lfGDgA~A~i 167 (325)
+.+||+++.+.
T Consensus 148 TkyGD~~~d~~ 158 (264)
T PRK13980 148 TKYGDGAVDIN 158 (264)
T ss_pred CCCCCCCCCHH
T ss_conf 01687665624
No 311
>cd00288 Pyruvate_Kinase Pyruvate kinase (PK): Large allosteric enzyme that regulates glycolysis through binding of the substrate, phosphoenolpyruvate, and one or more allosteric effectors. Like other allosteric enzymes, PK has a high substrate affinity R state and a low affinity T state. PK exists as several different isozymes, depending on organism and tissue type. In mammals, there are four PK isozymes: R, found in red blood cells, L, found in liver, M1, found in skeletal muscle, and M2, found in kidney, adipose tissue, and lung. PK forms a homotetramer, with each subunit containing three domains. The T state to R state transition of PK is more complex than in most allosteric enzymes, involving a concerted rotation of all 3 domains of each monomer in the homotetramer.
Probab=34.69 E-value=32 Score=14.76 Aligned_cols=24 Identities=8% Similarity=0.425 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHCCCCCCCEEEEEE
Q ss_conf 999999999806789998999998
Q gi|254780489|r 290 IPLSLSLENQRKPFQKGEKILTIS 313 (325)
Q Consensus 290 i~~~L~~~~~~g~i~~Gd~vll~~ 313 (325)
+-.+++.+.+.|.+++||+|++++
T Consensus 440 i~~a~~~l~~~g~v~~GD~VVv~a 463 (480)
T cd00288 440 LKAAVNVAKEKGLLKKGDLVVVVQ 463 (480)
T ss_pred HHHHHHHHHHCCCCCCCCEEEEEC
T ss_conf 999999999869989989899962
No 312
>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it. Related proteins include the BadF/BadG/BcrA/BcrD ATPase family (pfam01869), which includes an activator for (R)-2-hydroxyglutaryl-CoA dehydratase.
Probab=34.40 E-value=27 Score=15.23 Aligned_cols=25 Identities=20% Similarity=0.234 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 9999999999864301322234425
Q gi|254780489|r 55 TDIAIQAGDIALRNANIKKDSISLT 79 (325)
Q Consensus 55 ~~la~~Aa~~aL~~a~~~~~dId~i 79 (325)
..=|.+|.++||+.+|++.+||+.+
T Consensus 178 ~~sa~~~~~~al~~ag~~~~di~ai 202 (404)
T TIGR03286 178 IESAEEAVERALEEAGVSLEDVEAI 202 (404)
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 8889999999999739757765321
No 313
>TIGR00263 trpB tryptophan synthase, beta subunit; InterPro: IPR006654 Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan , : L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H_2O It has two functional domains, each found in bacteria and plants on a separate subunit: alpha chain (IPR002028 from INTERPRO) is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and beta chain is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together on a single multifunctional protein . The beta chain of the enzyme, represented here, requires pyridoxal-phosphate as a cofactor. The pyridoxal-phosphate group is attached to a lysine residue. The region around this lysine residue also contains two histidine residues which are part of the pyridoxal-phosphate binding site.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process.
Probab=33.97 E-value=33 Score=14.68 Aligned_cols=129 Identities=19% Similarity=0.180 Sum_probs=79.0
Q ss_pred HHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCC--------CC-CCCCCCCCCCCCC-HHHHHHHHHH
Q ss_conf 999999864301322234425884310023688743221121002--------38-6333421012310-1256765788
Q gi|254780489|r 59 IQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGL--------MQ-SGAIDLTGACAGF-LYALVMADSY 128 (325)
Q Consensus 59 ~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~--------~~-~~~~di~~~C~g~-l~aL~~A~~~ 128 (325)
-+|+.+||++|==+.+|.=+|| +|..+++.+|.+...-|.-+|- .. -.-=|.--||-|+ .||+=+=..|
T Consensus 167 KDA~N~AlrDWv~~~~dThYvl-GSa~GPhPfP~mVr~FQsvIG~E~k~Qi~~~e~grLPD~viACvGGGSNAiG~F~~F 245 (412)
T TIGR00263 167 KDAVNEALRDWVTSVDDTHYVL-GSAVGPHPFPTMVRDFQSVIGEEAKEQILEKEEGRLPDAVIACVGGGSNAIGIFYAF 245 (412)
T ss_pred HHHHHHHHHHHHCCCCCEEEEE-EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHCCHHH
T ss_conf 7899999987413637511232-111487767221178877898999999999962799738998516772035201232
Q ss_pred HH--------CCCCE----EEEEEECCCCC--CCCCC--CCCCCCCCCCCE-EEEEECCCCC---CCCCCCEEEEEEECC
Q ss_conf 74--------38850----58862012244--44622--244343254420-0112205765---444531135532136
Q gi|254780489|r 129 IN--------SHQKP----VLIIAANLLSR--RINLE--DKDTAIIFGDAA-GAVVLAPSPL---KDKSGILGIELTSDG 188 (325)
Q Consensus 129 i~--------~g~~~----vLVv~~e~~S~--~~d~~--d~~~~~lfGDgA-~A~il~~~~~---~~~~~il~~~~~s~~ 188 (325)
|+ +|... |=+|+.|..=. .+|-. ....+..+.-|- .-++=+.... .|...|..++-.|.|
T Consensus 246 i~saslPGaPaGD~~PaPDV~LiGVEAgG~rlGidt~aGy~~HaA~l~~G~t~Gv~HG~kt~lLQDedGQi~~~hSvSAG 325 (412)
T TIGR00263 246 IDSASLPGAPAGDPSPAPDVELIGVEAGGLRLGIDTDAGYDKHAATLSKGSTVGVLHGMKTYLLQDEDGQILEAHSVSAG 325 (412)
T ss_pred HCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 12335788888645888860589873376401545446762125301368632364133201020656760321127851
No 314
>PRK03566 consensus
Probab=33.69 E-value=33 Score=14.66 Aligned_cols=22 Identities=23% Similarity=0.353 Sum_probs=11.6
Q ss_pred EEEEEEECCCCCCCHHHHHHHHCC
Q ss_conf 999997358861388899988099
Q gi|254780489|r 8 ILGFGHAVPNQCIHNSIIERHLNL 31 (325)
Q Consensus 8 I~g~g~~lP~~~i~n~~l~~~~~~ 31 (325)
|..+--|.|...+ ++++++.|.
T Consensus 10 ~~~l~~y~~g~~~--~~~~~~~g~ 31 (365)
T PRK03566 10 VRALSPYQPGKPI--EELARELGL 31 (365)
T ss_pred HCCCCCCCCCCCH--HHHHHHHCC
T ss_conf 5277998899898--999987099
No 315
>PRK06851 hypothetical protein; Provisional
Probab=33.62 E-value=33 Score=14.65 Aligned_cols=55 Identities=13% Similarity=0.225 Sum_probs=31.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHC--------CCCCCCCCEEEEE--------EEEECCCCCCCCCCCCCCCCC
Q ss_conf 898879999999999986430--------1322234425884--------310023688743221121002
Q gi|254780489|r 49 EKHETLTDIAIQAGDIALRNA--------NIKKDSISLTLLA--------TSTPDHLLPPSSPLITHRLGL 103 (325)
Q Consensus 49 ~~~e~~~~la~~Aa~~aL~~a--------~~~~~dId~ii~~--------s~t~d~~~P~~a~~v~~~Lg~ 103 (325)
+|+.--++|--+-++..+++. -.+|+.+|-|+.- .+.|....|..-.-|-+-+++
T Consensus 39 GpGtGKStlmK~ig~~~~~~GydVE~~hcssD~~SlDGvvip~lk~aivDGTaPHvvdP~~PGaveeiInL 109 (368)
T PRK06851 39 GPGTGKSTLMKKIGEEFLEKGYDVEFLHCSSDNDSLDGVIIPELKIAILDGTAPHVVDPKAPGAVEEIINL 109 (368)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCEEEEEEH
T ss_conf 99977899999999999968983799975899886435997578779974888766589999843479777
No 316
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=33.47 E-value=18 Score=16.44 Aligned_cols=30 Identities=7% Similarity=-0.030 Sum_probs=14.4
Q ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC
Q ss_conf 02185409330005999999999806789998
Q gi|254780489|r 276 VNSLKDFGNSSSASIPLSLSLENQRKPFQKGE 307 (325)
Q Consensus 276 ~~~l~~~GN~~sAsi~~~L~~~~~~g~i~~Gd 307 (325)
-.+..++|+--+|.-.. +..+++...+|++
T Consensus 346 ~~~~~~~~~p~aa~~I~--~~il~~~~~~~~~ 375 (388)
T PRK13609 346 KEAMKSIYLPEPADHIV--DTILAENHVEPNH 375 (388)
T ss_pred HHHHHHCCCCCHHHHHH--HHHHHHHCCCCCC
T ss_conf 99998627985899999--9999863579764
No 317
>PRK07027 cobalamin biosynthesis protein CbiG; Provisional
Probab=33.29 E-value=34 Score=14.61 Aligned_cols=27 Identities=11% Similarity=0.046 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEE
Q ss_conf 999999999986430132223442588
Q gi|254780489|r 55 TDIAIQAGDIALRNANIKKDSISLTLL 81 (325)
Q Consensus 55 ~~la~~Aa~~aL~~a~~~~~dId~ii~ 81 (325)
.+--.++.+++|+++|+++++|+.|-.
T Consensus 16 ~e~I~~ai~~~l~~~~l~~~~I~~iaS 42 (126)
T PRK07027 16 AEQIEAAIRAALAQLPLASAEVRVVAT 42 (126)
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHEEE
T ss_conf 999999999999986999788111474
No 318
>PRK00768 nadE NAD synthetase; Reviewed
Probab=32.95 E-value=34 Score=14.58 Aligned_cols=32 Identities=16% Similarity=0.282 Sum_probs=16.4
Q ss_pred CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 388505886201224444622244343254420011
Q gi|254780489|r 131 SHQKPVLIIAANLLSRRINLEDKDTAIIFGDAAGAV 166 (325)
Q Consensus 131 ~g~~~vLVv~~e~~S~~~d~~d~~~~~lfGDgA~A~ 166 (325)
++....||++....|-.+ ..=.+.||||++.+
T Consensus 150 An~~g~LVlGTgNksE~~----vGYfTkYGDg~~Di 181 (274)
T PRK00768 150 AGARGGLVVGTDHAAEAI----TGFFTKFGDGGADL 181 (274)
T ss_pred HHCCCCEEECCCCHHHHH----CCCEEEECCCCCCH
T ss_conf 827899886488640444----08501026775173
No 319
>pfam02353 CMAS Cyclopropane-fatty-acyl-phospholipid synthase. This family consist of Cyclopropane-fatty-acyl-phospholipid synthase or CFA synthase EC:2.1.1.79 this enzyme catalyse the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid <= S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid.
Probab=32.53 E-value=35 Score=14.53 Aligned_cols=106 Identities=14% Similarity=0.114 Sum_probs=53.5
Q ss_pred CHHHHHHHHCCCHHHEEECCCCCEE-----EEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE-EECCCCCCCC
Q ss_conf 8889998809997683111475088-----994898879999999999986430132223442588431-0023688743
Q gi|254780489|r 21 HNSIIERHLNLKLGVIEQKTGIKYR-----YWAEKHETLTDIAIQAGDIALRNANIKKDSISLTLLATS-TPDHLLPPSS 94 (325)
Q Consensus 21 ~n~~l~~~~~~~~~~i~~~tGI~~R-----~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~-t~d~~~P~~a 94 (325)
+.+.+..+++.+.++.....| +++ +|.+++++..+--..-.+..++++++.|.+= |+=..| .+ +.+
T Consensus 6 ~~~nI~~HYDl~ndFy~~~Ld-~~m~YSca~f~~~~~tLe~AQ~~Kl~~i~~~l~l~~g~~--vLDiGCGWG-----~~a 77 (273)
T pfam02353 6 DAENIQAHYDLSNDFFALFLD-PTMTYSCAYFERPDMTLEEAQQAKLDLILDKLGLKPGMT--LLDIGCGWG-----GLM 77 (273)
T ss_pred HHHHHHHHCCCCHHHHHHHCC-CCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCE--EEEECCCCH-----HHH
T ss_conf 999999975898899998769-699886557179999999999999999998658899998--999788808-----999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC-C-CCEEEEEEE
Q ss_conf 2211210023863334210123101256765788743-8-850588620
Q gi|254780489|r 95 PLITHRLGLMQSGAIDLTGACAGFLYALVMADSYINS-H-QKPVLIIAA 141 (325)
Q Consensus 95 ~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~-g-~~~vLVv~~ 141 (325)
..++++.|. ++....++.. -.+.|...++. | .+++-|...
T Consensus 78 ~~~a~~~g~-~v~giTlS~~------Q~~~~~~r~~~~gl~~~v~v~~~ 119 (273)
T pfam02353 78 RRAAERYDV-NVVGLTLSKN------QYKLARQRVAAEGLQRKVEVLLQ 119 (273)
T ss_pred HHHHHHCCC-EEEEEECCHH------HHHHHHHHHHHCCCCCCCCEEEC
T ss_conf 999984795-1899979789------99999999987087432120006
No 320
>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion]
Probab=32.42 E-value=35 Score=14.52 Aligned_cols=33 Identities=18% Similarity=0.293 Sum_probs=23.9
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECC
Q ss_conf 88799999999999864301322234425884310023
Q gi|254780489|r 51 HETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDH 88 (325)
Q Consensus 51 ~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~ 88 (325)
++...+.-.++.++.+ +|++||+||.+++-||+
T Consensus 53 ~~~f~~~~l~~l~~~i-----d~k~iDYIi~~H~ePDh 85 (388)
T COG0426 53 GEKFFDEYLENLSKYI-----DPKEIDYIIVNHTEPDH 85 (388)
T ss_pred CCCHHHHHHHHHHHHC-----CHHCCEEEEECCCCCCH
T ss_conf 8016999999998634-----80017199978889633
No 321
>TIGR00761 argB acetylglutamate kinase; InterPro: IPR004662 N -Acetylglutamate (NAG) fulfils distinct biological roles in lower and higher organisms. In prokaryotes, lower eukaryotes and plants it is the first intermediate in the biosynthesis of arginine, whereas in ureotelic (excreting nitrogen mostly in the form of urea) vertebrates, it is an essential allosteric cofactor for carbamyl phosphate synthetase I (CPSI), the first enzyme of the urea cycle. The pathway that leads from glutamate to arginine in lower organisms employs eight steps, starting with the acetylation of glutamate to form NAG. In these species, NAG can be produced by two enzymatic reactions: one catalysed by NAG synthase (NAGS) and the other by ornithine acetyltransferase (OAT). In ureotelic species, NAG is produced exclusively by NAGS. In lower organisms, NAGS is feedback-inhibited by L-arginine, whereas mammalian NAGS activity is significantly enhanced by this amino acid. The NAGS genes of bacteria, fungi and mammals are more diverse than other arginine-biosynthesis and urea-cycle genes. The evolutionary relationship between the distinctly different roles of NAG and its metabolism in lower and higher organisms remains to be determined . The pathway from glutamate to arginine is: NAGS; N-acetylglutamate synthase (2.3.1.1 from EC) (glutamate to N-acetylglutamate) NAGK; N-acetylglutamate kinase (2.7.2.8 from EC) (N-acetylglutamate to N-acetylglutamate-5P) NAGSA; N-acetyl-gamma-glutamyl-phosphate reductase (1.2.1.38 from EC) (N-acetylglutamate-5P to N-acetylglumate semialdehyde) Acetylornithine aminotransferase (2.6.1.11 from EC) (N-acetylglumate semialdehyde to N-acetylornithine) Acetylornithine deacetylase (3.5.1.16 from EC) (N-acetylornithine to ornithine) Arginase (3.5.3.1 from EC) (ornithine to arginine) This entry describes N-acetylglutamate kinases (ArgB) of many prokaryotes and the N-acetylglutamate kinase domains of multifunctional proteins from yeasts as well as some, as yet, uncharacterised proteins.; GO: 0003991 acetylglutamate kinase activity, 0006526 arginine biosynthetic process, 0005737 cytoplasm.
Probab=32.01 E-value=34 Score=14.59 Aligned_cols=63 Identities=13% Similarity=0.096 Sum_probs=26.1
Q ss_pred HHHHHHCC-----CCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEE
Q ss_conf 99864301-----322234425884310023688743221121002386333421012310125676578874388505
Q gi|254780489|r 63 DIALRNAN-----IKKDSISLTLLATSTPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYINSHQKPV 136 (325)
Q Consensus 63 ~~aL~~a~-----~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~g~~~v 136 (325)
=..|+|.| ++..|=+++.---=+. ++.+...-.++.++|..+... .++. ++...+++.|+-+|
T Consensus 91 V~~l~~~g~~A~GL~g~Dg~L~~a~rk~~-~~~~~~~~vv~~~~G~VG~~~-~Vn~---------~~~~~Ll~~G~~PV 158 (254)
T TIGR00761 91 VALLNKHGINAIGLTGLDGQLFTADRKTA-SLDKEVIKVVAIDLGYVGEIK-KVNK---------ALLEALLKAGIIPV 158 (254)
T ss_pred HHHHHHCCCCEEEECCCCCCEEEEEEEEE-EEEECCCEEEEEECCCEEEEC-CCCH---------HHHHHHHHCCCCCE
T ss_conf 99999679928631135773579998789-885157689999748412313-2788---------99999996498517
No 322
>cd06221 sulfite_reductase_like Anaerobic sulfite reductase contains an FAD and NADPH binding module with structural similarity to ferredoxin reductase and sequence similarity to dihydroorotate dehydrogenases. Clostridium pasteurianum inducible dissimilatory type sulfite reductase is linked to ferredoxin and reduces NH2OH and SeO3 at a lesser rate than it's normal substate SO3(2-). Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+.
Probab=31.77 E-value=36 Score=14.45 Aligned_cols=53 Identities=19% Similarity=0.270 Sum_probs=31.1
Q ss_pred HHHHHHCCCCCCCCEEEECCCCCHHHHHH---HHHCCCCHHHHHHHHHHC-----CCCCCCHH
Q ss_conf 88997401200122463056541389999---997197865700218540-----93300059
Q gi|254780489|r 236 QSLRKSDLQPQDINRFIPHQANSRIIQKV---CEKIGLSKRIMVNSLKDF-----GNSSSASI 290 (325)
Q Consensus 236 ~~l~~~gl~~~did~~i~Hq~~~~~~~~~---~~~lgi~~~~~~~~l~~~-----GN~~sAsi 290 (325)
+.+.+.....++-..+++ +-..|++++ .+.+|+|.++++..++++ |-++++.+
T Consensus 179 ~~l~~~~~~~~~~~vy~C--GP~pMm~av~~~l~~~GVp~e~I~vSle~~M~CG~G~C~~C~v 239 (253)
T cd06221 179 DLLPELTLDPDNTVAIVC--GPPIMMRFVAKELLKLGVPEEQIWVSLERRMKCGVGKCGHCQI 239 (253)
T ss_pred HHHHHHCCCCCCCEEEEE--CCHHHHHHHHHHHHHCCCCHHEEEEECCCCCCCCCEECCCCCC
T ss_conf 999873778688599993--9999999999999984998000799315536683605487246
No 323
>pfam01902 ATP_bind_4 ATP-binding region. This family of proteins probably binds ATP. This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N terminus.In some members of this family, this domain is associated with pfam01042.
Probab=31.74 E-value=34 Score=14.58 Aligned_cols=113 Identities=9% Similarity=0.007 Sum_probs=52.0
Q ss_pred EEEEEEEECCCCCCCHHHHHHHHCCCHHH---EEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
Q ss_conf 99999973588613888999880999768---311147508899489887999999999998643013222344258843
Q gi|254780489|r 7 CILGFGHAVPNQCIHNSIIERHLNLKLGV---IEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTLLAT 83 (325)
Q Consensus 7 ~I~g~g~~lP~~~i~n~~l~~~~~~~~~~---i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s 83 (325)
.|..+-+..|++.-+- + ..+.+.+. ..+..||.-.....+++. +--+++.++++++- +|+.++++-
T Consensus 25 ~v~~L~t~~~~~~ds~--~--~H~~~~~l~~~qA~algiPl~~~~~~~~~--e~~~~~L~~~l~~~-----~i~~vv~Gd 93 (219)
T pfam01902 25 EVPYLVSMKSENKESY--M--FHEPNLHLTKLLAEALGIPIIKLYTKGEE--EKEVEDLAGFLESL-----DVDALVAGA 93 (219)
T ss_pred CCEEEEEEEECCCCCC--C--CCCCCHHHHHHHHHHCCCCEEEEECCCCH--HHHHHHHHHHHHHC-----CCCEEEECC
T ss_conf 8379999963799810--2--61578899999999759968999679861--79999999999875-----986999986
Q ss_pred EEECCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 10023688743221121002386-333421012310125676578874388505886
Q gi|254780489|r 84 STPDHLLPPSSPLITHRLGLMQS-GAIDLTGACAGFLYALVMADSYINSHQKPVLII 139 (325)
Q Consensus 84 ~t~d~~~P~~a~~v~~~Lg~~~~-~~~di~~~C~g~l~aL~~A~~~i~~g~~~vLVv 139 (325)
..-+++- .---.+++++|+... +-.. ..--+++..++..|-+.++|.
T Consensus 94 I~s~~qr-~~~e~~c~~lgl~~~~PLW~--------~d~~~ll~e~i~~Gf~aiIv~ 141 (219)
T pfam01902 94 IYSEYQK-SRIESVCRELGLKPFAPLWG--------RDPRKLAEEIVREGFEVAIVA 141 (219)
T ss_pred CCCHHHH-HHHHHHHHHCCCEEEECCCC--------CCHHHHHHHHHHCCCEEEEEE
T ss_conf 0368899-99999999729889710348--------999999999998799499999
No 324
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=31.40 E-value=23 Score=15.75 Aligned_cols=18 Identities=17% Similarity=0.237 Sum_probs=9.6
Q ss_pred CCCCCCCCCCCHHHHHHHHH
Q ss_conf 33421012310125676578
Q gi|254780489|r 108 AIDLTGACAGFLYALVMADS 127 (325)
Q Consensus 108 ~~di~~~C~g~l~aL~~A~~ 127 (325)
.+|+ ||.++..++..|..
T Consensus 77 VLDL--GcG~G~d~~~aA~~ 94 (258)
T PRK11873 77 VLDL--GSGAGFDCFLAARR 94 (258)
T ss_pred EEEE--CCCCCHHHHHHHHH
T ss_conf 9994--78877759999998
No 325
>TIGR01163 rpe ribulose-phosphate 3-epimerase; InterPro: IPR000056 Ribulose-phosphate 3-epimerase (5.1.3.1 from EC) (also known as pentose-5-phosphate 3-epimerase or PPE) is the enzyme that converts D-ribulose 5-phosphate into D-xylulose 5-phosphate in Calvin's reductive pentose phosphate cycle. In Alcaligenes eutrophus two copies of the gene coding for PPE are known , one is chromosomally encoded P40117 from SWISSPROT, the other one is on a plasmid Q04539 from SWISSPROT. PPE has been found in a wide range of bacteria, archaebacteria, fungi and plants. All the proteins have from 209 to 241 amino acid residues. The enzyme has a TIM barrel structure.; GO: 0004750 ribulose-phosphate 3-epimerase activity, 0005975 carbohydrate metabolic process.
Probab=30.65 E-value=37 Score=14.33 Aligned_cols=98 Identities=16% Similarity=0.215 Sum_probs=47.4
Q ss_pred CCCCCCCCCHHHHHHHCCCHHHHHHHHHHHH--CCCCCCCCEEEECCCCCHHHHHHHHH------CCCC----HHHHHHH
Q ss_conf 5523224514543432010036789889974--01200122463056541389999997------1978----6570021
Q gi|254780489|r 211 DFYMRITNGADIFYNAVKIMAQSAKQSLRKS--DLQPQDINRFIPHQANSRIIQKVCEK------IGLS----KRIMVNS 278 (325)
Q Consensus 211 ~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~--gl~~~did~~i~Hq~~~~~~~~~~~~------lgi~----~~~~~~~ 278 (325)
..|...|||..|...+. -|.++ +.+++. .+.. |+ |+..-.+. ++++.+++. +... .+|+..-
T Consensus 28 ~iH~DVMDGHFVPNlT~--Gp~v~-~~~r~~g~~~P~-DV-HLMv~~pd-~~~~~Fa~aGA~~I~vH~Ea~~h~~R~l~~ 101 (216)
T TIGR01163 28 LIHVDVMDGHFVPNLTF--GPPVL-EALRKYGTKLPI-DV-HLMVENPD-RYIEDFAEAGADIITVHAEATEHIHRLLQL 101 (216)
T ss_pred EEEEEECCCCCCCCCCC--CHHHH-HHHHHHCCCCCE-EE-EECCCCHH-HHHHHHHHHCCCEEEEECCCCCCHHHHHHH
T ss_conf 89986247971771002--77899-988740795212-66-30357857-778899970899899843776267999999
Q ss_pred HHHCCCCC-----CCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
Q ss_conf 85409330-----005999999999806789998999998615510
Q gi|254780489|r 279 LKDFGNSS-----SASIPLSLSLENQRKPFQKGEKILTISCRRGND 319 (325)
Q Consensus 279 l~~~GN~~-----sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~G~s 319 (325)
.+++|-.. .+++.-.|.+.++. =|.||++|+-|||+
T Consensus 102 Ik~~G~~AG~v~NP~TPl~~~~~~L~~-----~D~VLlMSVnPGFg 142 (216)
T TIGR01163 102 IKELGAKAGIVLNPATPLEALEYVLED-----VDLVLLMSVNPGFG 142 (216)
T ss_pred HHHCCCCEEEEECCCCCHHHHHHHHHH-----CCEEEEEEEECCCC
T ss_conf 997189706886799998789989876-----29899887607998
No 326
>pfam12244 DUF3606 Protein of unknown function (DUF3606). This family of proteins is found in bacteria. Proteins in this family are typically between 58 and 85 amino acids in length. There is a single completely conserved residue G that may be functionally important.
Probab=30.61 E-value=37 Score=14.33 Aligned_cols=44 Identities=20% Similarity=0.366 Sum_probs=31.4
Q ss_pred CCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
Q ss_conf 0120012246305654138999999719786570021854093300
Q gi|254780489|r 242 DLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNSLKDFGNSSS 287 (325)
Q Consensus 242 gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~l~~~GN~~s 287 (325)
...+.|-+++-+++ ..-.+.|+++||+++++.-.-+...||...
T Consensus 6 k~~~~Dr~~I~~~e--~~ev~yW~~~~gvt~~~L~~AV~~vG~~~~ 49 (57)
T pfam12244 6 KRGPQDRSRINLNE--EYEVKYWAKRLGVSEEQLKAAVRKVGNSAK 49 (57)
T ss_pred CCCCCCHHHCCCCC--HHHHHHHHHHHCCCHHHHHHHHHHHCCCHH
T ss_conf 05887423067675--899999999979499999999999885699
No 327
>PRK12390 1-aminocyclopropane-1-carboxylate deaminase; Provisional
Probab=30.14 E-value=38 Score=14.28 Aligned_cols=46 Identities=13% Similarity=0.096 Sum_probs=31.3
Q ss_pred HHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECC
Q ss_conf 99999971978657002185409330005999999999806789998999998615
Q gi|254780489|r 261 IQKVCEKIGLSKRIMVNSLKDFGNSSSASIPLSLSLENQRKPFQKGEKILTISCRR 316 (325)
Q Consensus 261 ~~~~~~~lgi~~~~~~~~l~~~GN~~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~ 316 (325)
++.+++.-||..|.++ ++--+..|-+++++|.+.+|++|+++=.|.
T Consensus 279 i~~~a~~eGI~LDPVY----------TgKa~~GL~~~i~~g~~~~g~~VlfiHTGG 324 (337)
T PRK12390 279 IRLCARLEGMLTDPVY----------EGKSMHGMIDLVRKGEFPEGSKVLYAHLGG 324 (337)
T ss_pred HHHHHHHHCCCCCCHH----------HHHHHHHHHHHHHCCCCCCCCEEEEEECCC
T ss_conf 9999997495236237----------899999999999769989999089998987
No 328
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=30.10 E-value=38 Score=14.27 Aligned_cols=66 Identities=15% Similarity=0.149 Sum_probs=32.9
Q ss_pred HHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEE
Q ss_conf 99986430132223442588431002368874322112100238-633342101231012567657887438850588
Q gi|254780489|r 62 GDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLMQ-SGAIDLTGACAGFLYALVMADSYINSHQKPVLI 138 (325)
Q Consensus 62 a~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~~-~~~~di~~~C~g~l~aL~~A~~~i~~g~~~vLV 138 (325)
.+++|.+. ....|+.++++-..-+++- .---.+++++|+.. .+-... .--++...++..|.+.++|
T Consensus 77 l~~~L~~~--k~~gi~~vv~GdI~s~~qr-~~~e~~c~~lgl~~~~PLW~~--------~~~~ll~e~i~~Gf~aiiv 143 (194)
T cd01994 77 LKELLRKL--KEEGVDAVVFGAILSEYQR-TRVERVCERLGLEPLAPLWGR--------DQEELLREMIEAGFKAIII 143 (194)
T ss_pred HHHHHHHH--HHCCCCEEEECCCCCHHHH-HHHHHHHHHCCCEEECHHCCC--------CHHHHHHHHHHCCCEEEEE
T ss_conf 99999999--9759959999963328899-999999997398887001079--------9999999999879909999
No 329
>pfam09103 BRCA-2_OB1 BRCA2, oligonucleotide/oligosaccharide-binding, domain 1. Members of this family assume an OB fold, which consists of a highly curved five-stranded beta-sheet that closes on itself to form a beta-barrel. OB1 has a shallow groove formed by one face of the curved sheet and is demarcated by two loops, one between beta 1 and beta 2 and another between beta 4 and beta 5, which allows for weak single strand DNA binding. The domain also binds the 70-amino acid DSS1 (deleted in split-hand/split foot syndrome) protein, which was originally identified as one of three genes that map to a 1.5-Mb locus deleted in an inherited developmental malformation syndrome.
Probab=29.86 E-value=39 Score=14.25 Aligned_cols=71 Identities=15% Similarity=0.168 Sum_probs=31.1
Q ss_pred HHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHCCC----CE
Q ss_conf 99998643013222344258843100236887432211210023863334210123101256765-78874388----50
Q gi|254780489|r 61 AGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMA-DSYINSHQ----KP 135 (325)
Q Consensus 61 Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A-~~~i~~g~----~~ 135 (325)
|.|+-+|+- ++..--+|++.+.....-. . .+....+.++.|..+.-..++.. ..+++.|. .+
T Consensus 2 alrkI~E~D--~~~~~~mVL~Vs~i~~~~~---~--------~~~~~~ielTDGWY~ika~lD~~L~~~l~~gkl~vGqK 68 (118)
T pfam09103 2 ALKKILEGD--DSAASPMVLLVSGISDEEE---D--------SNSNRIIELTDGWYSVKAQLDIPLTNLLRKGKLRVGQK 68 (118)
T ss_pred HHHHHHCCC--CCCCCEEEEEEEEECCCCC---C--------CCCCEEEEEECCEEEEEECCCHHHHHHHHCCCCCCCCE
T ss_conf 547645068--8767648999987345677---7--------88501899954668873416989999998099535737
Q ss_pred EEEEEECCC
Q ss_conf 588620122
Q gi|254780489|r 136 VLIIAANLL 144 (325)
Q Consensus 136 vLVv~~e~~ 144 (325)
..|.+++..
T Consensus 69 L~v~GA~L~ 77 (118)
T pfam09103 69 LRVCGAKLI 77 (118)
T ss_pred EEEECCEEE
T ss_conf 899885840
No 330
>PRK02628 nadE NAD synthetase; Reviewed
Probab=29.52 E-value=39 Score=14.21 Aligned_cols=51 Identities=16% Similarity=0.282 Sum_probs=25.0
Q ss_pred HHHHHHHCCCCCCCCEEEE-CCCCC----HHHHHHHHHCCCCHH-----HHH-HHHHHCCCC
Q ss_conf 9889974012001224630-56541----389999997197865-----700-218540933
Q gi|254780489|r 235 KQSLRKSDLQPQDINRFIP-HQANS----RIIQKVCEKIGLSKR-----IMV-NSLKDFGNS 285 (325)
Q Consensus 235 ~~~l~~~gl~~~did~~i~-Hq~~~----~~~~~~~~~lgi~~~-----~~~-~~l~~~GN~ 285 (325)
..+++..|+..++|--+.+ -+.+. .--..+++.||+.-. ..+ ..+...||.
T Consensus 383 a~A~d~Lg~~r~~V~~vtMPs~~TS~~S~~dA~~La~~LGi~~~~I~I~~a~~~~~~di~~~ 444 (678)
T PRK02628 383 AKAFDRLGLPRKNILAYTMPGFGTTDRTKNNAVALMKALGVTAREIDIRPAALQMLKDIGHP 444 (678)
T ss_pred HHHHHHHCCCHHCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCH
T ss_conf 99999848971224899778876578789999999997299779976299999999984442
No 331
>PRK11872 antC anthranilate dioxygenase reductase; Provisional
Probab=29.10 E-value=40 Score=14.16 Aligned_cols=41 Identities=12% Similarity=0.261 Sum_probs=21.5
Q ss_pred HHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHH---HCCCCHHHHH
Q ss_conf 898899740120012246305654138999999---7197865700
Q gi|254780489|r 234 AKQSLRKSDLQPQDINRFIPHQANSRIIQKVCE---KIGLSKRIMV 276 (325)
Q Consensus 234 i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~---~lgi~~~~~~ 276 (325)
+.+.+.+..+...+.+.+++ +...|++++.+ .+|+|+++++
T Consensus 288 v~~~~~~~~~~~~~~~vYlC--GPp~mv~a~~~~L~~~Gv~~~~I~ 331 (340)
T PRK11872 288 IHEHFDKDQLREQAFDMYLC--GPPPMVEAVKQWLDEQALQNYRLY 331 (340)
T ss_pred HHHHHHHHCCCCCCCEEEEE--CCHHHHHHHHHHHHHCCCCHHHEE
T ss_conf 88998853578889999990--999999999999998699889968
No 332
>TIGR02684 dnstrm_HI1420 probable addiction module antidote protein; InterPro: IPR014057 Members of this strictly bacterial protein family are small, at roughly 100 amino acids. The gene is almost invariably the downstream member of a gene pair. It is a predicted DNA-binding protein from a clade within the helix-turn-helix family IPR001387 from INTERPRO. These gene pairs, when found on the bacterial chromosome, are located often with prophage regions, but also both in integrated plasmid regions and in housekeeping gene regions. Analysis suggests that the gene pair may serve as an addiction module..
Probab=29.04 E-value=20 Score=16.16 Aligned_cols=64 Identities=23% Similarity=0.270 Sum_probs=49.5
Q ss_pred CCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHH
Q ss_conf 1003678988997401200122463056541389999997197865700218540933000599
Q gi|254780489|r 228 KIMAQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNSLKDFGNSSSASIP 291 (325)
Q Consensus 228 ~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~l~~~GN~~sAsi~ 291 (325)
+.|.....+++++.|=+|.-|.+-+-+=+-.|-+.++++.-|+..|..+.-|..=||=.=.+|.
T Consensus 15 E~~a~YL~~a~e~gGdDp~~~~~ALG~iArArGMtqlA~~tGlsREsLYkALs~~GnP~f~T~l 78 (91)
T TIGR02684 15 EEVAEYLAQALEDGGDDPALIAAALGVIARARGMTQLAKKTGLSRESLYKALSGGGNPTFDTIL 78 (91)
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHH
T ss_conf 8999999999743699988999998899865165789998287678878873568895668889
No 333
>PRK09483 response regulator; Provisional
Probab=28.59 E-value=39 Score=14.23 Aligned_cols=95 Identities=9% Similarity=0.040 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC-CE
Q ss_conf 99999999864301322234425884310023688743221121002386333421012310125676578874388-50
Q gi|254780489|r 57 IAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYINSHQ-KP 135 (325)
Q Consensus 57 la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~g~-~~ 135 (325)
+--++.+..|++. .+++.+-.+++..+.+ ..... .-++..-.|++.. ...+++.+..+.+..+ -+
T Consensus 12 l~r~gl~~~L~~~----~~~~vv~~a~~~~~~l------~~~~~-~~pDvvllDl~lp---~~~Gl~~~~~i~~~~p~~~ 77 (216)
T PRK09483 12 LVRAGIRRILEDI----KGIKVVGEASCGEDAV------KWCRT-NAVDVVLMDMNMP---GIGGLEATRKILRSTPDVK 77 (216)
T ss_pred HHHHHHHHHHHHC----CCCEEEEEECCHHHHH------HHHHH-CCCCEEEECCCCC---CCCCHHHHHHHHHHCCCCC
T ss_conf 9999999999748----9958999989999999------99985-5999999868898---9875237788874089985
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf 5886201224444622244343254420011220576
Q gi|254780489|r 136 VLIIAANLLSRRINLEDKDTAIIFGDAAGAVVLAPSP 172 (325)
Q Consensus 136 vLVv~~e~~S~~~d~~d~~~~~lfGDgA~A~il~~~~ 172 (325)
++|+++..- ... ..-.+..||.++|.-..+
T Consensus 78 vivls~~~~-----~~~--~~~al~~Ga~gyl~K~~~ 107 (216)
T PRK09483 78 IIMLTVHTE-----NPL--PAKVMQAGAAGYLSKGAA 107 (216)
T ss_pred EEEECCCCC-----HHH--HHHHHHCCCCEEEECCCC
T ss_conf 786305663-----288--999997488789947999
No 334
>PRK03202 6-phosphofructokinase; Provisional
Probab=27.69 E-value=34 Score=14.58 Aligned_cols=72 Identities=19% Similarity=0.278 Sum_probs=35.5
Q ss_pred CCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC-----CCCCCCCC--CCCCCCHHHHHHHHHHHHC-----C-CCEEE
Q ss_conf 3222344258843100236887432211210023-----86333421--0123101256765788743-----8-85058
Q gi|254780489|r 71 IKKDSISLTLLATSTPDHLLPPSSPLITHRLGLM-----QSGAIDLT--GACAGFLYALVMADSYINS-----H-QKPVL 137 (325)
Q Consensus 71 ~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~-----~~~~~di~--~~C~g~l~aL~~A~~~i~~-----g-~~~vL 137 (325)
+...+||.|++..--. .+ ..|..++++++++ ..--=|+. .-|-||-+|++.+...+.. . .+++.
T Consensus 90 l~~~~Id~Li~IGGdg--S~-~~a~~L~~~~~i~vigIPkTIDNDl~~tD~t~Gf~TA~~~~~~aid~i~~ta~s~~rv~ 166 (323)
T PRK03202 90 LKKHGIDALVVIGGDG--SY-DGAKKLSEEYGIPCIGIPKTIDNDLAGTDYTIGFDTALNTVVEAIDKLRDTASSHERVF 166 (323)
T ss_pred HHHCCCCEEEEECCCH--HH-HHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 9982999999937946--99-99999984379748972144468987776788889999999999866577650668779
Q ss_pred EEEECCCCCC
Q ss_conf 8620122444
Q gi|254780489|r 138 IIAANLLSRR 147 (325)
Q Consensus 138 Vv~~e~~S~~ 147 (325)
|| |+|-+.
T Consensus 167 iv--EvMGR~ 174 (323)
T PRK03202 167 IV--EVMGRH 174 (323)
T ss_pred EE--EECCCC
T ss_conf 99--935866
No 335
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=27.48 E-value=42 Score=13.98 Aligned_cols=14 Identities=29% Similarity=0.100 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHCC
Q ss_conf 99999999864301
Q gi|254780489|r 57 IAIQAGDIALRNAN 70 (325)
Q Consensus 57 la~~Aa~~aL~~a~ 70 (325)
-|+++|-+.=++.+
T Consensus 40 ~AlE~AlrlkE~~g 53 (256)
T PRK03359 40 NAIEAACQLKQQAA 53 (256)
T ss_pred HHHHHHHHHHHHCC
T ss_conf 99999999888519
No 336
>PRK00561 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=27.46 E-value=42 Score=13.98 Aligned_cols=62 Identities=8% Similarity=0.081 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 99999999998643013222344258843100236887432211210023863334210123101256
Q gi|254780489|r 55 TDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYAL 122 (325)
Q Consensus 55 ~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL 122 (325)
+.=-....+++|++..+.++|.|++|+-.--+-.+ ..++.+...+++.+.|+.|-.||++-+
T Consensus 13 s~~~~~~l~~~~~~~~~~~d~~DlviviGGDGT~L------~a~~~~~~~~iPilGIN~G~lGFLt~~ 74 (259)
T PRK00561 13 TEPVLPKLKKVLKKKLAVEDGADYLFVLGGDGFFV------STAANYNCAGCKVVGINTGHLGFYTSF 74 (259)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHH------HHHHHHCCCCCCEEEEECCCCEEEECC
T ss_conf 79999999999854786788999999989719999------999985547996899966973364158
No 337
>PRK02947 hypothetical protein; Provisional
Probab=27.40 E-value=21 Score=16.04 Aligned_cols=14 Identities=29% Similarity=0.594 Sum_probs=6.7
Q ss_pred HHHHHHHHHHHCCCC
Q ss_conf 367898899740120
Q gi|254780489|r 231 AQSAKQSLRKSDLQP 245 (325)
Q Consensus 231 ~~~i~~~l~~~gl~~ 245 (325)
.++++. |.+.|+.|
T Consensus 204 ~e~~~~-L~~~G~~p 217 (247)
T PRK02947 204 AEAAEE-LVERGIDP 217 (247)
T ss_pred HHHHHH-HHHCCCCC
T ss_conf 999999-99779999
No 338
>PRK05826 pyruvate kinase; Provisional
Probab=27.39 E-value=43 Score=13.97 Aligned_cols=25 Identities=16% Similarity=0.207 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHCCCCCCCEEEEEE
Q ss_conf 5999999999806789998999998
Q gi|254780489|r 289 SIPLSLSLENQRKPFQKGEKILTIS 313 (325)
Q Consensus 289 si~~~L~~~~~~g~i~~Gd~vll~~ 313 (325)
.+-.++..+.+.|.+++||+|++++
T Consensus 432 ~~~~a~~~~~~~g~~~~GD~vVvv~ 456 (461)
T PRK05826 432 AAEEALRLLLERGLVESGDLVVLTQ 456 (461)
T ss_pred HHHHHHHHHHHCCCCCCCCEEEEEE
T ss_conf 9999999999879989989899992
No 339
>PRK13385 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional
Probab=27.24 E-value=43 Score=13.95 Aligned_cols=10 Identities=20% Similarity=0.325 Sum_probs=4.5
Q ss_pred CCCCEEEEEE
Q ss_conf 2344258843
Q gi|254780489|r 74 DSISLTLLAT 83 (325)
Q Consensus 74 ~dId~ii~~s 83 (325)
..||-++.+.
T Consensus 44 ~~i~~Ivvv~ 53 (238)
T PRK13385 44 SEFNEIIIAT 53 (238)
T ss_pred CCCCEEEEEC
T ss_conf 7678799967
No 340
>TIGR00689 rpiB_lacA_lacB sugar-phosphate isomerases, RpiB/LacA/LacB family; InterPro: IPR003500 This entry represents the sugar isomerase enzymes ribose 5-phosphate isomerase B (rpiB), galactose isomerase subunit A (LacA) and galactose isomerase subunit B (LacB). Galactose-6-phosphate isomerase (5.3.1.26 from EC) is a heteromultimeric protein consisting of subunits LacA and LacB, and catalyses the conversion of D-galactose 6-phosphate to D-tagatose and 6-phosphate in the tagatose 6-phosphate pathway of lactose catabolism . Galactose-6-phosphate isomerase is induced by galactose or lactose. This entry represents the LacB subunit. Ribose 5-phosphate isomerase (5.3.1.6 from EC) forms a homodimer and catalyses the interconversion of D-ribose 5-phosphate and D-ribulose 5-phosphate in the non-oxidative branch of the pentose phosphate pathway. This reaction permits the synthesis of ribose from other sugars, as well as the recycling of sugars from nucleotide breakdown. Two unrelated enzymes can catalyse this reaction: RpiA (found in most organisms) and RpiB (found in some bacteria and eukaryotes). RpiB is also involved in metabolism of the rare sugar, allose, in addition to ribose sugars. The structures of RpiA and RpiB are distinct, RpiB having a Rossmann-type alpha/beta/alpha sandwich topology .; GO: 0005975 carbohydrate metabolic process.
Probab=27.20 E-value=43 Score=13.95 Aligned_cols=64 Identities=8% Similarity=0.076 Sum_probs=28.2
Q ss_pred HHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 9999864301322234425884310023688743221121002386333421012310125676578874
Q gi|254780489|r 61 AGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYIN 130 (325)
Q Consensus 61 Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~ 130 (325)
-+.+-|++-++.+=|++..-+. ...-+|.-|..|+.+.--.. ..+.|- =|.++ .++++|++.++
T Consensus 15 ~I~~hL~~~~~~~iD~G~~~~~---~~~DYPdYA~~Va~~v~~~~-~~~GIL-ICGTG-iG~siaANK~~ 78 (146)
T TIGR00689 15 KIIEHLEQKGLEVIDLGTLEYD---ESVDYPDYAKLVAQKVVEGE-ASLGIL-ICGTG-IGMSIAANKVK 78 (146)
T ss_pred HHHHHHHHCCCCEEEECCCCCC---CCCCCHHHHHHHHHHHHCCC-CCCCEE-EECCC-CCEEECCCCCC
T ss_conf 9999874368415750676788---99887478999999986288-873247-73687-51211013523
No 341
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=27.06 E-value=43 Score=13.93 Aligned_cols=105 Identities=15% Similarity=0.122 Sum_probs=50.9
Q ss_pred CCHHHHHHHHCCCHHHEEE---CCCCC-EEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE-EECCCCCCCC
Q ss_conf 3888999880999768311---14750-88994898879999999999986430132223442588431-0023688743
Q gi|254780489|r 20 IHNSIIERHLNLKLGVIEQ---KTGIK-YRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTLLATS-TPDHLLPPSS 94 (325)
Q Consensus 20 i~n~~l~~~~~~~~~~i~~---~tGI~-~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~-t~d~~~P~~a 94 (325)
-+++.+..+++.+.+.... .+-.. .-+|-+++++..+=-..+.+..+++.++.|.+- |+=-.| .+ +++
T Consensus 15 ~~~~~i~~HYDl~n~fy~l~Ld~~~~Yscayf~~~~~tL~eAQ~~k~~~~~~kl~L~~G~~--lLDiGCGWG-----~l~ 87 (283)
T COG2230 15 RAAENIQAHYDLSNDFYRLFLDPSMTYSCAYFEDPDMTLEEAQRAKLDLILEKLGLKPGMT--LLDIGCGWG-----GLA 87 (283)
T ss_pred CHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCE--EEEECCCHH-----HHH
T ss_conf 1445206675065689998628987624577579988858999999999997569999998--987478844-----999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC-C-CCEEEE
Q ss_conf 2211210023863334210123101256765788743-8-850588
Q gi|254780489|r 95 PLITHRLGLMQSGAIDLTGACAGFLYALVMADSYINS-H-QKPVLI 138 (325)
Q Consensus 95 ~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~-g-~~~vLV 138 (325)
.+.+++.|. ++...+++ -+....+...++. | ..++=|
T Consensus 88 ~~aA~~y~v-~V~GvTlS------~~Q~~~~~~r~~~~gl~~~v~v 126 (283)
T COG2230 88 IYAAEEYGV-TVVGVTLS------EEQLAYAEKRIAARGLEDNVEV 126 (283)
T ss_pred HHHHHHCCC-EEEEEECC------HHHHHHHHHHHHHCCCCCCCEE
T ss_conf 999998499-79996689------9999999999997599766079
No 342
>TIGR01258 pgm_1 phosphoglycerate mutase 1 family; InterPro: IPR005952 Most members of this family are phosphoglycerate mutase (5.4.2.1 from EC). This enzyme interconverts 2-phosphoglycerate and 3-phosphoglycerate. 2-phospho-D-glycerate + 2,3-diphosphoglycerate = 3-phospho-D-glycerate + 2,3-diphosphoglycerate. The enzyme is transiently phosphorylated on an active site histidine by 2,3-diphosphoglyerate, which is both substrate and product. Some members of this family have are phosphoglycerate mutase as a minor activity and act primarily as a bisphoglycerate mutase, interconverting 2,3-diphosphoglycerate and 1,3-diphosphoglycerate (5.4.2.4 from EC). ; GO: 0016868 intramolecular transferase activity phosphotransferases, 0006096 glycolysis.
Probab=26.99 E-value=32 Score=14.81 Aligned_cols=175 Identities=15% Similarity=0.204 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 9999999864301322234425884310023688743221121002---3863334210123101256765788743885
Q gi|254780489|r 58 AIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGL---MQSGAIDLTGACAGFLYALVMADSYINSHQK 134 (325)
Q Consensus 58 a~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~---~~~~~~di~~~C~g~l~aL~~A~~~i~~g~~ 134 (325)
|.+|+ ++|.+.|+.++ |.|.|... +.. .|...|-++|.= +=..+.=+|-==.|.|+||+=+...-+=|..
T Consensus 35 A~~AG-~lLke~g~~FD----~ayTS~Lk-RAI-~Tl~~~L~~ldq~WlPV~ksWRLNERHYGaLQGLnK~ETa~KYGee 107 (248)
T TIGR01258 35 AKRAG-KLLKEEGYEFD----IAYTSLLK-RAI-HTLNIVLDELDQLWLPVKKSWRLNERHYGALQGLNKAETAAKYGEE 107 (248)
T ss_pred HHHHH-HHHHHCCCCCC----EEEHHHHH-HHH-HHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHH
T ss_conf 99999-99996599876----21101267-899-9999999985880113102242334403313798879999760601
Q ss_pred EEEEE--EECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 05886--2012244446222443432544200112205765444531135532136776527830698667654455655
Q gi|254780489|r 135 PVLII--AANLLSRRINLEDKDTAIIFGDAAGAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDF 212 (325)
Q Consensus 135 ~vLVv--~~e~~S~~~d~~d~~~~~lfGDgA~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (325)
.|.+= +=|+.-.-+|..|+.. ..+..|.+|.....-
T Consensus 108 QV~~WRRSfDv~PPpld~~d~~~--------------------------psi~~D~RYa~~~~~---------------- 145 (248)
T TIGR01258 108 QVKIWRRSFDVPPPPLDEKDPRS--------------------------PSIGKDPRYAGLDPK---------------- 145 (248)
T ss_pred HEEEEECCCCCCCCCCCCCCCCC--------------------------CCCCCCCCCCCCCCC----------------
T ss_conf 03012213578517898887767--------------------------655678310057743----------------
Q ss_pred CCCCCCC-HHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHC-CCCHHHHHH-HHHHCCCCCCCH
Q ss_conf 2322451-4543432010036789889974012001224630565413899999971-978657002-185409330005
Q gi|254780489|r 213 YMRITNG-ADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKI-GLSKRIMVN-SLKDFGNSSSAS 289 (325)
Q Consensus 213 ~~~~~~g-~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~l-gi~~~~~~~-~l~~~GN~~sAs 289 (325)
-+=.++. .++.+++++++.+.|..-|... -. | .++-| +| -++++.|-| +++.+.+.. |++ ..
T Consensus 146 ~lP~tEsLk~T~~RvlPYW~d~I~p~l~~G-K~---V-LI~AH-GN--SLRALvKhL~~~Sd~~Il~LNIP-------TG 210 (248)
T TIGR01258 146 VLPLTESLKDTVARVLPYWNDEIAPELKSG-KR---V-LIAAH-GN--SLRALVKHLEGISDEEILELNIP-------TG 210 (248)
T ss_pred CCCCCCCHHHHHHHHCCCHHHEEHHHHHCC-CE---E-EEEEC-CH--HHHHHHHHHHCCCHHHHHHCCCC-------CC
T ss_conf 577555778899650653111101354468-97---9-99822-80--48999998612794688504598-------75
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q gi|254780489|r 290 IPLSLSL 296 (325)
Q Consensus 290 i~~~L~~ 296 (325)
||+.++.
T Consensus 211 iPLvyeL 217 (248)
T TIGR01258 211 IPLVYEL 217 (248)
T ss_pred CCHHHHC
T ss_conf 5334100
No 343
>PRK13930 rod shape-determining protein MreB; Provisional
Probab=26.97 E-value=39 Score=14.19 Aligned_cols=46 Identities=22% Similarity=0.347 Sum_probs=25.1
Q ss_pred CHHHHHHHHHHHH--CCCCCCCCE-EEECCCCCH---HHHHHHHHCCCCHHH
Q ss_conf 0036789889974--012001224-630565413---899999971978657
Q gi|254780489|r 229 IMAQSAKQSLRKS--DLQPQDINR-FIPHQANSR---IIQKVCEKIGLSKRI 274 (325)
Q Consensus 229 ~~~~~i~~~l~~~--gl~~~did~-~i~Hq~~~~---~~~~~~~~lgi~~~~ 274 (325)
.+.+.++++|+++ .+..+.++. ++.-=++.+ +.+.+.+.+|+|...
T Consensus 260 ~i~~~i~~~L~~~~~el~~Di~~~gIiLvGGsSriP~i~~~l~e~~g~~v~~ 311 (336)
T PRK13930 260 QIVEAIKSVLEKTPPELAADIIDRGIVLTGGGALLRGLDKLLSEETGLPVHI 311 (336)
T ss_pred HHHHHHHHHHHCCCHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCC
T ss_conf 9999899887506723212112683999877455147999999997839888
No 344
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=26.88 E-value=43 Score=13.91 Aligned_cols=116 Identities=16% Similarity=0.173 Sum_probs=53.7
Q ss_pred EEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEE--ECCCCCCC--CCCCCCCCCCCC-CCCCC
Q ss_conf 31114750889948988799999999999864301322234425884310--02368874--322112100238-63334
Q gi|254780489|r 36 IEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTLLATST--PDHLLPPS--SPLITHRLGLMQ-SGAID 110 (325)
Q Consensus 36 i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t--~d~~~P~~--a~~v~~~Lg~~~-~~~~d 110 (325)
|.+..|.+-+.|.=-+.....+-.++..+.|+++ .+.|| ||...|+ |--..|+. -..|++-+.-++ .+-||
T Consensus 136 If~~aGl~v~~Y~y~d~~t~~ldf~~~~~~L~~a--~~gsv--vlLh~ccHNPTG~D~t~eqW~~ia~~~~~k~l~p~~D 211 (397)
T PRK09257 136 IFEAAGLEVKTYPYYDAATKGLDFDGMLADLSQA--PAGDV--VLLHGCCHNPTGADLTPEQWDEVAELLKERGLIPFLD 211 (397)
T ss_pred HHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHC--CCCCE--EEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE
T ss_conf 9997798057765564545762899999999828--99998--9972566798899989999999999999669868884
Q ss_pred CCCCCCCCHHHHHH---HHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 21012310125676---5788743885058862012244446222443432544200112
Q gi|254780489|r 111 LTGACAGFLYALVM---ADSYINSHQKPVLIIAANLLSRRINLEDKDTAIIFGDAAGAVV 167 (325)
Q Consensus 111 i~~~C~g~l~aL~~---A~~~i~~g~~~vLVv~~e~~S~~~d~~d~~~~~lfGDgA~A~i 167 (325)
+ +.-||-.+++. +-+++......++|+- -+|+.+ .++|+-.+|+.
T Consensus 212 ~--AYqGf~sGl~~Da~~iR~f~~~~~e~lva~--SfSKnf--------gLY~eRvG~l~ 259 (397)
T PRK09257 212 I--AYQGFGDGLEEDAYGLRLFAAAGLELLVAS--SFSKNF--------GLYGERVGALS 259 (397)
T ss_pred H--HCCCCCCCHHHHHHHHHHHHHHCCCEEEEE--ECCCCC--------CCCCCCCEEEE
T ss_conf 0--014334668999999999997288579984--037543--------33467750389
No 345
>cd01781 AF6_RA_repeat2 The AF-6 protein (also known as afadin and canoe) is a multidomain cell junction protein that contains two N-terminal Ras-associating (RA) domains in addition to FHA (forkhead-associated), DIL (class V myosin homology region), and PDZ domains and a proline-rich region. AF6 acts downstream of the Egfr (Epidermal Growth Factor-receptor)/Ras signalling pathway and provides a link from Egfr to cytoskeletal elements.
Probab=26.85 E-value=39 Score=14.20 Aligned_cols=28 Identities=14% Similarity=0.216 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEECCCC
Q ss_conf 0367898899740120012246305654
Q gi|254780489|r 230 MAQSAKQSLRKSDLQPQDINRFIPHQAN 257 (325)
Q Consensus 230 ~~~~i~~~l~~~gl~~~did~~i~Hq~~ 257 (325)
..++++++|++-|+..+|.+.|+..+.+
T Consensus 28 A~~vV~EaLekYgL~kedp~~YcLv~V~ 55 (100)
T cd01781 28 ADRIVGEALEKYGLEKSDPDDYCLVEVS 55 (100)
T ss_pred HHHHHHHHHHHHCCCCCCHHHEEEEEEE
T ss_conf 9999999999848895882026999974
No 346
>pfam07736 CM_1 Chorismate mutase type I. Chorismate mutase EC:5.4.99.5 catalyses the conversion of chorismate to prephenate in the pathway of tyrosine and phenylalanine biosynthesis. This enzyme is negatively regulated by tyrosine, tryptophan and phenylalanine.
Probab=26.43 E-value=44 Score=13.86 Aligned_cols=45 Identities=20% Similarity=0.347 Sum_probs=28.9
Q ss_pred HHHHHHHHCCCCCCCCCEEEEEEEEEC--CCCCCCCCCCCCCC-CCCCCCCC
Q ss_conf 999986430132223442588431002--36887432211210-02386333
Q gi|254780489|r 61 AGDIALRNANIKKDSISLTLLATSTPD--HLLPPSSPLITHRL-GLMQSGAI 109 (325)
Q Consensus 61 Aa~~aL~~a~~~~~dId~ii~~s~t~d--~~~P~~a~~v~~~L-g~~~~~~~ 109 (325)
-.++.+++-+++++||-.+++ |+|+| -.+|+.|+ +++ |..+++.+
T Consensus 25 Ll~~ii~~N~l~~~diiSv~F-T~T~DL~a~FPA~aa---R~~~G~~~Vplm 72 (118)
T pfam07736 25 LLDEIIERNGLDPEDIVSVIF-TVTPDLDAAFPAAAA---RELPGWKNVPLL 72 (118)
T ss_pred HHHHHHHHCCCCHHHEEEEEE-EECCCCCCCCCHHHH---HHHCCCCCCCCC
T ss_conf 999999975999889789999-876643330859999---864699664701
No 347
>pfam02261 Asp_decarbox Aspartate decarboxylase. Decarboxylation of aspartate is the major route of beta-alanine production in bacteria, and is catalysed by the enzyme aspartate decarboxylase EC:4.1.1.11 which requires a pyruvoyl group for its activity. It is synthesized initially as a proenzyme which is then proteolytically cleaved to an alpha (C-terminal) and beta (N-terminal) subunit and a pyruvoyl group. This family contains both chains of aspartate decarboxylase.
Probab=26.35 E-value=24 Score=15.60 Aligned_cols=10 Identities=30% Similarity=0.338 Sum_probs=4.9
Q ss_pred CEEEEEEECC
Q ss_conf 5058862012
Q gi|254780489|r 134 KPVLIIAANL 143 (325)
Q Consensus 134 ~~vLVv~~e~ 143 (325)
.++.|+....
T Consensus 42 E~V~V~Nv~N 51 (116)
T pfam02261 42 EKVQIVNVNN 51 (116)
T ss_pred CEEEEEECCC
T ss_conf 8899998989
No 348
>PRK09629 bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional
Probab=26.13 E-value=38 Score=14.30 Aligned_cols=47 Identities=19% Similarity=0.152 Sum_probs=28.2
Q ss_pred HHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999998643013222344258843100236887432211210023863334
Q gi|254780489|r 60 QAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLMQSGAID 110 (325)
Q Consensus 60 ~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~~~~~~d 110 (325)
+-.++.|++.|++|++ +.|.||.+-. +. +....|.+.||.+++.+||
T Consensus 209 eeL~ell~~~GItpDk-eIItYCqt~~-RS--s~TylVlklLGyp~VR~Yd 255 (610)
T PRK09629 209 QDMPEILRDLGITPDK-EVITHCQTHH-RS--GFTYLVAKALGYPRVKAYA 255 (610)
T ss_pred HHHHHHHHHCCCCCCC-CEEEECCCCC-EE--HHHHHHHHHCCCCCCCCCC
T ss_conf 9999999975999899-8999899762-50--9999999975965021337
No 349
>COG4065 Uncharacterized protein conserved in archaea [Function unknown]
Probab=25.91 E-value=45 Score=13.80 Aligned_cols=42 Identities=17% Similarity=0.269 Sum_probs=32.4
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCC-CCCEEEEEE-EEECCCCCC
Q ss_conf 887999999999998643013222-344258843-100236887
Q gi|254780489|r 51 HETLTDIAIQAGDIALRNANIKKD-SISLTLLAT-STPDHLLPP 92 (325)
Q Consensus 51 ~e~~~~la~~Aa~~aL~~a~~~~~-dId~ii~~s-~t~d~~~P~ 92 (325)
.|+.++|-.....+.|++|+++.+ |++.++-.+ ++..+..|-
T Consensus 94 resVaelVk~tl~eslkkA~l~i~~Dl~FVVRSTGVtAGF~SPE 137 (480)
T COG4065 94 RESVAELVKDTLLESLKKASLDIDTDLHFVVRSTGVTAGFASPE 137 (480)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHH
T ss_conf 88999999999999998647752355238996144014779979
No 350
>PRK05449 aspartate alpha-decarboxylase; Provisional
Probab=25.76 E-value=24 Score=15.60 Aligned_cols=36 Identities=19% Similarity=0.206 Sum_probs=13.7
Q ss_pred CEEEEEEECCCCCC---CCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 50588620122444---4622244343254420011220
Q gi|254780489|r 134 KPVLIIAANLLSRR---INLEDKDTAIIFGDAAGAVVLA 169 (325)
Q Consensus 134 ~~vLVv~~e~~S~~---~d~~d~~~~~lfGDgA~A~il~ 169 (325)
.++.|+.-..-.|+ .=+..+.+..+-=-||+|-+..
T Consensus 42 E~V~V~Nv~NG~Rf~TYvI~g~~GSg~I~lNGaAAr~~~ 80 (126)
T PRK05449 42 EKVDIVNVNNGARFETYVIKGERGSGVICLNGAAARLVQ 80 (126)
T ss_pred CEEEEEECCCCCEEEEEEEECCCCCCEEEECCHHHHCCC
T ss_conf 889999898995899999864798875875667872279
No 351
>TIGR01011 rpsB_bact ribosomal protein S2; InterPro: IPR005706 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites , . About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many of ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome , . This family describes the bacterial, mitochondrial and chloroplast forms of ribosomal protein S2.; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0015935 small ribosomal subunit.
Probab=25.69 E-value=34 Score=14.59 Aligned_cols=58 Identities=19% Similarity=0.214 Sum_probs=37.9
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC---CCCEEEEEEEC-CC
Q ss_conf 843100236887432211210023863334210123101256765788743---88505886201-22
Q gi|254780489|r 81 LATSTPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYINS---HQKPVLIIAAN-LL 144 (325)
Q Consensus 81 ~~s~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~---g~~~vLVv~~e-~~ 144 (325)
+++.|+ |.-|=+..+|-.+=. .+.+-+||.-. ++.|+.|+.+++. ..+.+|-||.= ..
T Consensus 14 FGHqtR-RWNPkMk~fIf~eRK-ngihIIDL~kT----~~~~~~Ay~~v~~~~~~gg~iLFVGTKNkQ 75 (227)
T TIGR01011 14 FGHQTR-RWNPKMKPFIFGERK-NGIHIIDLQKT----LQLLEEAYNFVREVVANGGKILFVGTKNKQ 75 (227)
T ss_pred CCCEEC-CCCCCCCCCCCCCCC-CCCEEECHHHH----HHHHHHHHHHHHHHHHCCCEEEEEECHHHH
T ss_conf 375422-368889885532012-78512257899----999999999999999819958885165889
No 352
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=25.58 E-value=46 Score=13.76 Aligned_cols=11 Identities=18% Similarity=0.078 Sum_probs=6.7
Q ss_pred EEEEEEECCCC
Q ss_conf 05886201224
Q gi|254780489|r 135 PVLIIAANLLS 145 (325)
Q Consensus 135 ~vLVv~~e~~S 145 (325)
.=||+|++..+
T Consensus 109 ~DLIl~G~~s~ 119 (202)
T cd01714 109 VDLILTGKQSI 119 (202)
T ss_pred CCEEEEEEECC
T ss_conf 98899954545
No 353
>PRK00782 hypothetical protein; Provisional
Probab=25.43 E-value=46 Score=13.74 Aligned_cols=63 Identities=6% Similarity=0.178 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHC-----CCCCCCCEEEECCCCCHHHHHHHHH-CCCCHHHHHHHHHHCCCCCCCHHHHH
Q ss_conf 367898899740-----1200122463056541389999997-19786570021854093300059999
Q gi|254780489|r 231 AQSAKQSLRKSD-----LQPQDINRFIPHQANSRIIQKVCEK-IGLSKRIMVNSLKDFGNSSSASIPLS 293 (325)
Q Consensus 231 ~~~i~~~l~~~g-----l~~~did~~i~Hq~~~~~~~~~~~~-lgi~~~~~~~~l~~~GN~~sAsi~~~ 293 (325)
.+.+...+++.+ +--.|+.|+-+++...+..+.+.++ +.++.+.++..+.+++||.+...|++
T Consensus 162 ~~~l~~~~~~~~~~~liV~SSD~sHy~~~~~a~~~D~~~i~~I~~lD~~~~~~~~~~~~~t~CG~~pi~ 230 (272)
T PRK00782 162 GEAIAEAVSELGRDVVIIASSDFTHYELPERAKEKDMRIIDAILDLDVDGMYEEIYRMNHTACGYGPIA 230 (272)
T ss_pred HHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEECHHHHH
T ss_conf 999999998449987999957776888899999999999999981698999999985387488789999
No 354
>TIGR01136 cysKM cysteine synthases; InterPro: IPR005856 This model discriminates cysteine synthases (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblance to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded. Cysteine synthase (O-acetylserine (thiol)-lyase) is the enzyme responsible for the formation of cysteine from O-acetyl-serine and hydrogen sulphide with the concomitant release of acetic acid. In bacteria such two forms of the enzyme are known (genes cysK and cysM). CysM differs from CysK in that it can also use thiosulphate instead of sulphide, to produce cysteine thiosulphonate instead of cysteine. ; GO: 0004124 cysteine synthase activity, 0006535 cysteine biosynthetic process from serine.
Probab=25.37 E-value=39 Score=14.19 Aligned_cols=75 Identities=25% Similarity=0.190 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHCCCCCCCCCEEEEEEE--EECCCCCCCCCCCCCCCCCC------CC---------CC----CCCCCCC
Q ss_conf 9999999986430132223442588431--00236887432211210023------86---------33----3421012
Q gi|254780489|r 57 IAIQAGDIALRNANIKKDSISLTLLATS--TPDHLLPPSSPLITHRLGLM------QS---------GA----IDLTGAC 115 (325)
Q Consensus 57 la~~Aa~~aL~~a~~~~~dId~ii~~s~--t~d~~~P~~a~~v~~~Lg~~------~~---------~~----~di~~~C 115 (325)
.|..=+.+|.++-.+.|.+. ||=+|+ |+--+ ++|+...|.+ .. .+ +=+..+=
T Consensus 45 ~A~~MI~~AE~~G~lk~G~~--iiEaTSGNTGIaL-----AMvAAarGYkliL~MPetmS~ERr~~l~ayGA~L~LT~~~ 117 (315)
T TIGR01136 45 IALNMILDAEKRGLLKPGTT--IIEATSGNTGIAL-----AMVAAARGYKLILTMPETMSLERRKLLKAYGAELILTPAE 117 (315)
T ss_pred HHHHHHHHHHHCCCCCCCCE--EEECCCCCHHHHH-----HHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCEEEEECCC
T ss_conf 88999999986588788888--9842778448999-----9999861991899858871789999998709669883733
Q ss_pred CCCHHHHHHHHHHHHCCC-CEEEE
Q ss_conf 310125676578874388-50588
Q gi|254780489|r 116 AGFLYALVMADSYINSHQ-KPVLI 138 (325)
Q Consensus 116 ~g~l~aL~~A~~~i~~g~-~~vLV 138 (325)
-|+--|++.|..+.+.+. +++++
T Consensus 118 ~GM~GAi~kA~el~~~~p~~~~~l 141 (315)
T TIGR01136 118 EGMKGAIDKAEELAAETPNKYVML 141 (315)
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEC
T ss_conf 575778999999998588962103
No 355
>COG0853 PanD Aspartate 1-decarboxylase [Coenzyme metabolism]
Probab=25.24 E-value=33 Score=14.68 Aligned_cols=10 Identities=20% Similarity=0.255 Sum_probs=4.5
Q ss_pred CCEEEEEECC
Q ss_conf 4200112205
Q gi|254780489|r 161 DAAGAVVLAP 170 (325)
Q Consensus 161 DgA~A~il~~ 170 (325)
.||+|-+...
T Consensus 71 NGAAArl~~~ 80 (126)
T COG0853 71 NGAAARLVQV 80 (126)
T ss_pred CHHHHHHCCC
T ss_conf 6698852688
No 356
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=25.24 E-value=46 Score=13.72 Aligned_cols=25 Identities=4% Similarity=0.053 Sum_probs=16.2
Q ss_pred CCEEEEEEEEECCCCCCCHHHHHHHHC
Q ss_conf 620999999735886138889998809
Q gi|254780489|r 4 SSSCILGFGHAVPNQCIHNSIIERHLN 30 (325)
Q Consensus 4 ~~~~I~g~g~~lP~~~i~n~~l~~~~~ 30 (325)
-...|.++..|.|... -+++.+.+|
T Consensus 3 ~r~~i~~l~pY~~g~~--~~~~~~~~g 27 (366)
T PRK01533 3 VKDQLSSLQPYKPGKS--PEQMKEVYG 27 (366)
T ss_pred CCHHHHCCCCCCCCCC--HHHHHHHHC
T ss_conf 4857508999999999--899998618
No 357
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase; InterPro: IPR010237 This family of proteins includes the SDT1/SSM1 gene from yeast, which has been shown to code for a pyrimidine (UMP/CMP) 5'nucleotidase. The family spans plants, fungi and bacteria. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily..
Probab=25.08 E-value=28 Score=15.16 Aligned_cols=30 Identities=10% Similarity=0.039 Sum_probs=13.8
Q ss_pred CCCHHHHHHHHHCC-CCHHHHHHHHHHCCCC
Q ss_conf 54138999999719-7865700218540933
Q gi|254780489|r 256 ANSRIIQKVCEKIG-LSKRIMVNSLKDFGNS 285 (325)
Q Consensus 256 ~~~~~~~~~~~~lg-i~~~~~~~~l~~~GN~ 285 (325)
|+..+.+.+++..| ++++|.+..=+-..|+
T Consensus 162 P~~~ay~~~~~~~~~vd~~~~~f~DDS~rNi 192 (205)
T TIGR01993 162 PSPEAYEKALREAGVVDPERAIFFDDSARNI 192 (205)
T ss_pred CCHHHHHHHHHHHCCCCCCCEEEECCCHHHH
T ss_conf 8889999999985588720017530468788
No 358
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=25.02 E-value=47 Score=13.69 Aligned_cols=20 Identities=10% Similarity=0.154 Sum_probs=8.9
Q ss_pred HHHHHHHCCCCCCC-CCEEEE
Q ss_conf 99986430132223-442588
Q gi|254780489|r 62 GDIALRNANIKKDS-ISLTLL 81 (325)
Q Consensus 62 a~~aL~~a~~~~~d-Id~ii~ 81 (325)
....|.+-++..++ ||.-+.
T Consensus 20 i~~fL~~~~l~~d~~ve~~v~ 40 (352)
T COG3053 20 IAEFLHQNDLRVDTTVEYFVA 40 (352)
T ss_pred HHHHHHHCCCEECCCCEEEEE
T ss_conf 999886347511365208999
No 359
>TIGR02802 Pal_lipo peptidoglycan-associated lipoprotein; InterPro: IPR014169 Members in this entry represent the peptidoglycan-associated lipoprotein (Pal or OprL) protein of the Tol-Pal system. The system appears to be involved both in the maintenance of outer membrane integrity and in the import of certain organic molecules as nutrients. Members of this family contain a hydrodrophobic lipoprotein signal sequence, a conserved N-terminal cleavage and modification site, a poorly conserved low-complexity region, together comprising about 65 amino acids, and a well-conserved C-terminal domain. The entry represents only the conserved C-terminal domain..
Probab=24.70 E-value=48 Score=13.65 Aligned_cols=49 Identities=12% Similarity=0.065 Sum_probs=34.5
Q ss_pred CCCCHHHHH---HHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCC
Q ss_conf 988799999---9999998643013222344258843100236887432211
Q gi|254780489|r 50 KHETLTDIA---IQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLIT 98 (325)
Q Consensus 50 ~~e~~~~la---~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~ 98 (325)
..|.+.-|+ +.|+++.|...|+.++.|..|-|+-.=|-...-+-+||=+
T Consensus 45 TrEYNlALGeRRA~AV~~yL~~~GV~~~q~~~vSYGkErP~~~G~~E~~wak 96 (104)
T TIGR02802 45 TREYNLALGERRANAVKDYLQAKGVSASQIETVSYGKERPAALGHDEAAWAK 96 (104)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHH
T ss_conf 8777777889999999999997389611004630266568778988577754
No 360
>cd06919 Asp_decarbox Aspartate alpha-decarboxylase or L-aspartate 1-decarboxylase, a pyruvoyl group-dependent decarboxylase in beta-alanine production. Decarboxylation of aspartate is the major route of beta-alanine production in bacteria, and is catalyzed by the enzyme L-aspartate decarboxylase (ADC), EC:4.1.1.11 which requires a pyruvoyl group for its activity. The pyruvoyl cofactor is covalently bound to the enzyme. The protein is synthesized as a proenzyme and cleaved via self-processing at Gly23-Ser24 to yield an alpha chain (C-terminal fragment) and beta chain (N-terminal fragment), and the pyruvoyl group. Beta-alanine is required for the biosynthesis of pantothenate, in which the enzyme plays a critical regulatory role. The active site of the tetrameric enzyme is located at the interface of two subunits, with a Lysine and a Histidine from the beta chain of one subunit forming the active site with residues from the alpha chain of the adjacent subunit. This alignment
Probab=24.63 E-value=24 Score=15.54 Aligned_cols=10 Identities=30% Similarity=0.494 Sum_probs=4.7
Q ss_pred CEEEEEEECC
Q ss_conf 5058862012
Q gi|254780489|r 134 KPVLIIAANL 143 (325)
Q Consensus 134 ~~vLVv~~e~ 143 (325)
.++.|+.-+.
T Consensus 41 E~V~V~N~~N 50 (111)
T cd06919 41 EKVLVVNVNN 50 (111)
T ss_pred CEEEEEECCC
T ss_conf 8899998989
No 361
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=24.61 E-value=48 Score=13.64 Aligned_cols=16 Identities=6% Similarity=-0.141 Sum_probs=8.1
Q ss_pred HHHHHHHCCCHHHEEE
Q ss_conf 8999880999768311
Q gi|254780489|r 23 SIIERHLNLKLGVIEQ 38 (325)
Q Consensus 23 ~~l~~~~~~~~~~i~~ 38 (325)
.+.++++|.+.+.|.+
T Consensus 11 ~~~a~~~G~~~~~iid 26 (358)
T PRK07392 11 AWAAAIAGCPPSAILD 26 (358)
T ss_pred HHHHHHHCCCHHHCEE
T ss_conf 9999982979998466
No 362
>PRK05472 redox-sensing transcriptional repressor Rex; Provisional
Probab=24.45 E-value=48 Score=13.62 Aligned_cols=11 Identities=18% Similarity=0.232 Sum_probs=5.9
Q ss_pred CCEEEEEEECC
Q ss_conf 85058862012
Q gi|254780489|r 133 QKPVLIIAANL 143 (325)
Q Consensus 133 ~~~vLVv~~e~ 143 (325)
..++.+|++..
T Consensus 84 ~~~v~lvGaGn 94 (211)
T PRK05472 84 TTNVALVGAGN 94 (211)
T ss_pred CCEEEEECCCH
T ss_conf 75089988877
No 363
>COG2971 Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=24.40 E-value=48 Score=13.62 Aligned_cols=109 Identities=18% Similarity=0.075 Sum_probs=50.7
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
Q ss_conf 87999999999998643013222344258843100236887432211210023863334210123101256765788743
Q gi|254780489|r 52 ETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYINS 131 (325)
Q Consensus 52 e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~ 131 (325)
|.+..=..+|+++|+.++|.+|++|+.....-..-+... ...+.+.+..++-+.-+++ |+-...||+-+ .
T Consensus 45 e~A~~ni~~ai~~A~~~aG~~~~~i~~~~agla~ag~~~--~~~~~~~~~~l~~a~~v~v---~~Dg~iAl~ga-----~ 114 (301)
T COG2971 45 EEAVRNIKDAIREALDEAGLKPDEIAAIVAGLALAGANV--EEAREELERLLPFAGKVDV---ENDGLIALRGA-----L 114 (301)
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEEECCCCCH--HHHHHHHHHHCCCCCEEEE---ECCHHHHHHHC-----C
T ss_conf 789999999999998762899778170124550357662--6778889873686646999---55769998613-----2
Q ss_pred CCCEEEEEEECCCCCCCCCCCC-CC-----CCCCCCCEEEEEECC
Q ss_conf 8850588620122444462224-43-----432544200112205
Q gi|254780489|r 132 HQKPVLIIAANLLSRRINLEDK-DT-----AIIFGDAAGAVVLAP 170 (325)
Q Consensus 132 g~~~vLVv~~e~~S~~~d~~d~-~~-----~~lfGDgA~A~il~~ 170 (325)
+...-.|+.+-+-|-.+-..+. .. .++.||=+++.-+++
T Consensus 115 ~~~~Gii~i~GTGSi~~~~~gg~~~r~GG~Gf~IgDegSga~ig~ 159 (301)
T COG2971 115 GDDDGIIVIAGTGSIGYGRKGGRRERVGGWGFPIGDEGSGAWIGR 159 (301)
T ss_pred CCCCCEEEEECCCEEEEEEECCEEEEECCCCCCCCCCCHHHHHHH
T ss_conf 799878999258769999708866775686751156520779999
No 364
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=24.31 E-value=48 Score=13.61 Aligned_cols=31 Identities=29% Similarity=0.369 Sum_probs=16.7
Q ss_pred CCCCCCCCCC-CCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 2112100238-63334210123101256765788
Q gi|254780489|r 96 LITHRLGLMQ-SGAIDLTGACAGFLYALVMADSY 128 (325)
Q Consensus 96 ~v~~~Lg~~~-~~~~di~~~C~g~l~aL~~A~~~ 128 (325)
.++++|++++ -..+|| ||.-+-.++..|..+
T Consensus 158 ~i~~kl~l~~G~~VLeI--GcGWGgla~~aA~~~ 189 (383)
T PRK11705 158 LICRKLQLKPGMRVLDI--GCGWGGLARYAAEHY 189 (383)
T ss_pred HHHHHCCCCCCCEEEEE--CCCHHHHHHHHHHHC
T ss_conf 99986489999979885--787499999999974
No 365
>TIGR01743 purR_Bsub pur operon repressor; InterPro: IPR010078 This entry represents the pur operon repressor PurR of low-GC Gram-positive bacteria. This homodimeric repressor contains a large region homologous to phosphoribosyltransferases and is inhibited by 5-phosphoribosyl 1-pyrophosphate.; GO: 0003677 DNA binding, 0016564 transcription repressor activity, 0016481 negative regulation of transcription, 0045982 negative regulation of purine base metabolic process.
Probab=24.31 E-value=48 Score=13.61 Aligned_cols=70 Identities=10% Similarity=0.209 Sum_probs=47.0
Q ss_pred HHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC------CC-----CCCCCC--CCCC-CCHHHHHHHHHHH
Q ss_conf 98643013222344258843100236887432211210023------86-----333421--0123-1012567657887
Q gi|254780489|r 64 IALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLM------QS-----GAIDLT--GACA-GFLYALVMADSYI 129 (325)
Q Consensus 64 ~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~------~~-----~~~di~--~~C~-g~l~aL~~A~~~i 129 (325)
+.|... .--.|||.|+..-+=+ . +.|..+|+-|+.+ +. -...|| +|.+ .=.+.+.+|++-+
T Consensus 118 ~ila~~-F~d~~ID~V~TV~TKG---v-PLA~~~A~~LnV~lvivRkD~kvTEGStVSiNYVSGssG~~I~~M~LarrSL 192 (269)
T TIGR01743 118 KILASV-FIDKEIDAVMTVETKG---V-PLAYAVAKVLNVPLVIVRKDSKVTEGSTVSINYVSGSSGDRIQKMSLARRSL 192 (269)
T ss_pred HHHHHH-CCCCCCCEEEEEECCC---H-HHHHHHHHHCCCCEEEEECCCCEECCCEEEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 887543-2685578789952188---2-3898998764961799984681210532899556768743678888888888
Q ss_pred HCCCCEEEE
Q ss_conf 438850588
Q gi|254780489|r 130 NSHQKPVLI 138 (325)
Q Consensus 130 ~~g~~~vLV 138 (325)
+.|.|..+|
T Consensus 193 k~GS~vL~v 201 (269)
T TIGR01743 193 KKGSKVLIV 201 (269)
T ss_pred HHCCEEEEE
T ss_conf 608908999
No 366
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=24.30 E-value=44 Score=13.87 Aligned_cols=37 Identities=19% Similarity=0.124 Sum_probs=15.7
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf 3899999971978657002185409330005999999
Q gi|254780489|r 259 RIIQKVCEKIGLSKRIMVNSLKDFGNSSSASIPLSLS 295 (325)
Q Consensus 259 ~~~~~~~~~lgi~~~~~~~~l~~~GN~~sAsi~~~L~ 295 (325)
.-++.+.+++||.+++.+..+.+-|+..++-.+..|.
T Consensus 65 ~~l~~~l~~~GI~~~~~VV~Y~~~~~~~a~r~~w~L~ 101 (122)
T cd01448 65 EEFAELLGSLGISNDDTVVVYDDGGGFFAARAWWTLR 101 (122)
T ss_pred HHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHH
T ss_conf 9999999980988897599980898738999999999
No 367
>TIGR01428 HAD_type_II haloacid dehalogenase, type II; InterPro: IPR006328 These proteins catalyze the hydrolytic dehalogenation of small L-2-haloalkanoic acids to yield the corresponding D-2-hydroxyalkanoic acids . They belong to the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases, class (subfamily) I. Note that the Type I HAD enzymes have not yet been fully characterised, but clearly utilise a substantially different catalytic mechanism and are thus unlikely to be related.; GO: 0019120 hydrolase activity acting on acid halide bonds in C-halide compounds, 0008152 metabolic process.
Probab=24.00 E-value=49 Score=13.57 Aligned_cols=19 Identities=16% Similarity=0.146 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHHHHCCCC
Q ss_conf 9999999999986430132
Q gi|254780489|r 54 LTDIAIQAGDIALRNANIK 72 (325)
Q Consensus 54 ~~~la~~Aa~~aL~~a~~~ 72 (325)
-.++..+|.+.++++.++.
T Consensus 62 f~~~~~~al~~~~~~~~~~ 80 (207)
T TIGR01428 62 FWDLTAEALRYLLGRLGLA 80 (207)
T ss_pred HHHHHHHHHHHHHHHCCCC
T ss_conf 8999999999999755877
No 368
>cd03749 proteasome_alpha_type_1 proteasome_alpha_type_1. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming an elongated alpha-beta-beta-alpha cylinder with a central cavity. The proteasome alpha and beta subunits are members of the N-terminal nucleophile (Ntn)-hydrolase superfamily. Their N-terminal threonine residues are exposed as a nucleophile in peptide bond hydrolysis. Mammals have 7 alpha and 7 beta proteasome subunits while archaea have one of each.
Probab=23.98 E-value=49 Score=13.57 Aligned_cols=27 Identities=15% Similarity=0.268 Sum_probs=14.3
Q ss_pred HCCCHHHHHHHHHHH-HCCCCCCCCEEE
Q ss_conf 201003678988997-401200122463
Q gi|254780489|r 226 AVKIMAQSAKQSLRK-SDLQPQDINRFI 252 (325)
Q Consensus 226 ~~~~~~~~i~~~l~~-~gl~~~did~~i 252 (325)
+++...++++..+.. ..++.++|+--+
T Consensus 182 av~lA~~aL~~~~~~~~~l~~~~ieiav 209 (211)
T cd03749 182 LIKHALRALRETLPGEQELTIKNVSIAI 209 (211)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCEEEEE
T ss_conf 9999999999985166764867359999
No 369
>pfam06723 MreB_Mbl MreB/Mbl protein. This family consists of bacterial MreB and Mbl proteins as well as two related archaeal sequences. MreB is known to be a rod shape-determining protein in bacteria and goes to make up the bacterial cytoskeleton. Genes coding for MreB/Mbl are only found in elongated bacteria, not in coccoid forms. It has been speculated that constituents of the eukaryotic cytoskeleton (tubulin, actin) may have evolved from prokaryotic precursor proteins closely related to today's bacterial proteins FtsZ and MreB/Mbl.
Probab=23.96 E-value=45 Score=13.81 Aligned_cols=49 Identities=16% Similarity=0.321 Sum_probs=27.7
Q ss_pred CCHHHHHHHHHHHH--CCCCCCCCE-EEECCCCCH---HHHHHHHHCCCCHHHHH
Q ss_conf 10036789889974--012001224-630565413---89999997197865700
Q gi|254780489|r 228 KIMAQSAKQSLRKS--DLQPQDINR-FIPHQANSR---IIQKVCEKIGLSKRIMV 276 (325)
Q Consensus 228 ~~~~~~i~~~l~~~--gl~~~did~-~i~Hq~~~~---~~~~~~~~lgi~~~~~~ 276 (325)
..+.+.++++|+++ .+..+.+|. ++.-=++-+ +.+.+.+.+|.+.....
T Consensus 251 ~~~~~~i~~~L~~~~~~l~~d~~d~~ViLvGGsSriP~v~~~l~~~fg~~~~~~~ 305 (327)
T pfam06723 251 SAIVEAVKEVLEKTPPELAADIVDRGIVLTGGGALLRGLDKLLSDETGLPVHIAE 305 (327)
T ss_pred HHHHHHHHHHHHHCCHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCC
T ss_conf 9999999999985626452121478299977624414799999999784988898
No 370
>pfam01650 Peptidase_C13 Peptidase C13 family. Members of this family are asparaginyl peptidases. The blood fluke parasite Schistosoma mansoni has at least five Clan CA cysteine peptidases in its digestive tract including cathepsins B (2 isoforms), C, F and L. All have been recombinantly expressed as active enzymes, albeit in various stages of activation. In addition, a Clan CD peptidase, termed asparaginyl endopeptidase or 'legumain' has been identified. This has formerly been characterized as a 'haemoglobinase', but this term is probably incorrect. Two cDNAs have been described for Schistosoma mansoni legumain; one encodes an active enzyme whereas the active site cysteine residue encoded by the second cDNA is substituted by an asparagine residue. Both forms have been recombinantly expressed.
Probab=23.66 E-value=38 Score=14.30 Aligned_cols=20 Identities=20% Similarity=0.296 Sum_probs=9.2
Q ss_pred HHHHHHHCCCCCCCCCEEEE
Q ss_conf 99986430132223442588
Q gi|254780489|r 62 GDIALRNANIKKDSISLTLL 81 (325)
Q Consensus 62 a~~aL~~a~~~~~dId~ii~ 81 (325)
+-+.|++.|+..+.|=++.+
T Consensus 24 ~Y~~lk~~Gipd~~Iilm~~ 43 (258)
T pfam01650 24 AYQLLKKFGIKDENIIVMMY 43 (258)
T ss_pred HHHHHHHCCCCHHHEEEEEC
T ss_conf 99999985999899798605
No 371
>KOG0820 consensus
Probab=23.56 E-value=50 Score=13.51 Aligned_cols=14 Identities=21% Similarity=0.444 Sum_probs=8.1
Q ss_pred HHHHHHCCCCCCCC
Q ss_conf 99864301322234
Q gi|254780489|r 63 DIALRNANIKKDSI 76 (325)
Q Consensus 63 ~~aL~~a~~~~~dI 76 (325)
.+-.++|.+.|.|+
T Consensus 48 ~~I~~ka~~k~tD~ 61 (315)
T KOG0820 48 DQIVEKADLKPTDV 61 (315)
T ss_pred HHHHHCCCCCCCCE
T ss_conf 99986047899877
No 372
>PRK04841 transcriptional regulator MalT; Provisional
Probab=23.13 E-value=51 Score=13.46 Aligned_cols=20 Identities=15% Similarity=0.152 Sum_probs=13.1
Q ss_pred CCCCCCHHHHHHHHHHHHCC
Q ss_conf 01231012567657887438
Q gi|254780489|r 113 GACAGFLYALVMADSYINSH 132 (325)
Q Consensus 113 ~~C~g~l~aL~~A~~~i~~g 132 (325)
.-.-||..+|+++.-....+
T Consensus 213 ~~TeGW~a~l~L~~l~~~~~ 232 (903)
T PRK04841 213 DRVEGWPTALQLIALSARQN 232 (903)
T ss_pred HHHCCHHHHHHHHHHHHHCC
T ss_conf 97087899999999985307
No 373
>KOG0024 consensus
Probab=22.89 E-value=51 Score=13.43 Aligned_cols=11 Identities=27% Similarity=0.603 Sum_probs=5.1
Q ss_pred CCCEEEECCCC
Q ss_conf 12246305654
Q gi|254780489|r 247 DINRFIPHQAN 257 (325)
Q Consensus 247 did~~i~Hq~~ 257 (325)
|+++++.|.-.
T Consensus 317 ~~k~lIT~r~~ 327 (354)
T KOG0024 317 DVKPLITHRYK 327 (354)
T ss_pred CCHHHEECCCC
T ss_conf 71133001246
No 374
>PRK13928 rod shape-determining protein Mbl; Provisional
Probab=22.77 E-value=50 Score=13.52 Aligned_cols=50 Identities=18% Similarity=0.272 Sum_probs=27.1
Q ss_pred HCCCHHHHHHHHHHHH--CCCCCCCCE-EEECCCCCHH---HHHHHHHCCCCHHHH
Q ss_conf 2010036789889974--012001224-6305654138---999999719786570
Q gi|254780489|r 226 AVKIMAQSAKQSLRKS--DLQPQDINR-FIPHQANSRI---IQKVCEKIGLSKRIM 275 (325)
Q Consensus 226 ~~~~~~~~i~~~l~~~--gl~~~did~-~i~Hq~~~~~---~~~~~~~lgi~~~~~ 275 (325)
.+..+.+.++++|+++ .++.+.+|. ++.-=++.++ .+.+.+.+|+|....
T Consensus 251 ~~~~i~~~i~~~Le~~~~el~~di~d~GIvLvGGssrip~v~~~l~~~~g~~~~~~ 306 (325)
T PRK13928 251 PVSAIVQAVKSVLERTPPELSADIIDKGIIMTGGGALLHGLDKLLAEETKVPVYIA 306 (325)
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999997285544121126949998751332679999999978398778
No 375
>PRK04346 tryptophan synthase subunit beta; Validated
Probab=22.30 E-value=53 Score=13.35 Aligned_cols=87 Identities=18% Similarity=0.192 Sum_probs=48.1
Q ss_pred HHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC---CC-----CCCCCCCCCCCC-HHHHHHHHHHH
Q ss_conf 9999998643013222344258843100236887432211210023---86-----333421012310-12567657887
Q gi|254780489|r 59 IQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLM---QS-----GAIDLTGACAGF-LYALVMADSYI 129 (325)
Q Consensus 59 ~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~---~~-----~~~di~~~C~g~-l~aL~~A~~~i 129 (325)
.+|..+|++.+=-++++--++| +|+...+.+|.+...-|.-+|.. +. .-=|.--+|.|+ .+++-+...|+
T Consensus 171 kdAi~EA~r~wv~~~~~t~Y~i-GSv~gPHP~P~~Vr~fQsvIG~E~k~Q~~e~~G~~PD~vvaCVGGGSNa~G~f~pFl 249 (392)
T PRK04346 171 KDAVNEALRDWVTNVEDTHYII-GSVAGPHPYPTMVRDFQSVIGEEAKAQILEKEGRLPDAVVACVGGGSNAIGIFHPFI 249 (392)
T ss_pred HHHHHHHHHHHHHCCCCEEEEE-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHCCCC
T ss_conf 9999999999984877728951-675789833889998999854999999999738999999987787611665321013
Q ss_pred HCCCCEEEEEEECCCCCCC
Q ss_conf 4388505886201224444
Q gi|254780489|r 130 NSHQKPVLIIAANLLSRRI 148 (325)
Q Consensus 130 ~~g~~~vLVv~~e~~S~~~ 148 (325)
.- +.+=+|+.|...+.+
T Consensus 250 ~d--~~v~ligVEa~G~g~ 266 (392)
T PRK04346 250 DD--PSVRLIGVEAAGKGL 266 (392)
T ss_pred CC--CCEEEEEEECCCCCC
T ss_conf 68--751599985366777
No 376
>TIGR00014 arsC arsenate reductase; InterPro: IPR006659 This entry describes a distinct clade, including ArsC itself, of the broader family of ArsC and related proteins. This clade is almost completely restricted to the proteobacteria. An anion-translocating ATPase has been identified as the product of the arsenical resistance operon of resistance plasmid R773 . When expressed in Escherichia coli this ATP-driven oxyanion pump catalyses extrusion of the oxyanions arsenite, antimonite and arsenate. The pump is composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate. ; GO: 0008794 arsenate reductase (glutaredoxin) activity, 0006118 electron transport.
Probab=22.27 E-value=53 Score=13.35 Aligned_cols=50 Identities=16% Similarity=0.424 Sum_probs=37.1
Q ss_pred HHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHH-HHH----HHHHCC
Q ss_conf 789889974012001224630565413899999971978657-002----185409
Q gi|254780489|r 233 SAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRI-MVN----SLKDFG 283 (325)
Q Consensus 233 ~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~-~~~----~l~~~G 283 (325)
..-.+|++.|+.++=+ .++=.|+++.-++.+.++||++.-| ... .|.+.|
T Consensus 14 ~tLalL~dkgi~P~vV-~YL~~pp~~seL~~~~~~LG~~~ar~~~R~ke~~y~eLg 68 (114)
T TIGR00014 14 QTLALLEDKGIEPEVV-KYLKNPPTKSELKALLAKLGISSAREMIRTKEELYKELG 68 (114)
T ss_pred HHHHHHHHCCCCCEEE-ECCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCC
T ss_conf 9999998569995474-145897486889999987089703630117652100047
No 377
>pfam02685 Glucokinase Glucokinase. This is a family of glucokinases or glucose kinases EC:2.7.1.2. These enzymes phosphorylate glucose using ATP as a donor to give glucose-6-phosphate and ADP.
Probab=22.16 E-value=53 Score=13.34 Aligned_cols=48 Identities=19% Similarity=0.102 Sum_probs=24.4
Q ss_pred HHHHHHHHHCCCCCCCCCEEEEEEEEE---CCCCCCC------CCCCCCCCCCCCCC
Q ss_conf 999998643013222344258843100---2368874------32211210023863
Q gi|254780489|r 60 QAGDIALRNANIKKDSISLTLLATSTP---DHLLPPS------SPLITHRLGLMQSG 107 (325)
Q Consensus 60 ~Aa~~aL~~a~~~~~dId~ii~~s~t~---d~~~P~~------a~~v~~~Lg~~~~~ 107 (325)
++.++.|++.+.+..+++..+.+-.-| +.....+ ...+++++|++++.
T Consensus 40 ~~l~~~l~~~~~~~~~~~~~~~avAGPv~~~~~~lTN~~W~i~~~~l~~~~g~~~v~ 96 (316)
T pfam02685 40 EALQDYLAEADAGVARPRHACFAVAGPVDGDEVRLTNLPWVISIEELRAALGLDAVH 96 (316)
T ss_pred HHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEECCCCEECHHHHHHHHCCCEEE
T ss_conf 999999984686667867699998677539978874786065599999972998599
No 378
>TIGR02365 dha_L_ycgS dihydroxyacetone kinase, L subunit; InterPro: IPR012737 Two types of dihydroxyacetone kinase (glycerone kinase) are described. In yeast and a few bacteria, e.g. Citrobacter freundii, the enzyme is a single chain that uses ATP as phosphoryl donor and is designated 2.7.1.29 from EC. By contract, Escherichia coli and many other bacterial species have a multisubunit form (2.7.1 from EC) with a phosphoprotein donor related to PTS transport proteins. The sequences in this entry represent the subunit homologous to the E. coli YcgS subunit..
Probab=22.05 E-value=42 Score=14.02 Aligned_cols=16 Identities=25% Similarity=0.194 Sum_probs=9.3
Q ss_pred CCCC--CCCHHHHHHHHH
Q ss_conf 0933--000599999999
Q gi|254780489|r 282 FGNS--SSASIPLSLSLE 297 (325)
Q Consensus 282 ~GN~--~sAsi~~~L~~~ 297 (325)
.||. |+.|..+.|..+
T Consensus 181 iGH~DPGA~SS~~~~~al 198 (200)
T TIGR02365 181 IGHIDPGATSSYLLLNAL 198 (200)
T ss_pred CCCCCCHHHHHHHHHHHH
T ss_conf 455081678999999997
No 379
>KOG2865 consensus
Probab=22.02 E-value=21 Score=15.91 Aligned_cols=64 Identities=13% Similarity=0.156 Sum_probs=28.3
Q ss_pred HHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCC-------CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
Q ss_conf 99999986430132223442588431002368874-------32211210023863334210123101256765788743
Q gi|254780489|r 59 IQAGDIALRNANIKKDSISLTLLATSTPDHLLPPS-------SPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYINS 131 (325)
Q Consensus 59 ~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~-------a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~ 131 (325)
.+.+|++.+.+|+-.+=|+.= -.|..+.+-.. -++|+++.|..+- |.-.|.| .-+.--.+|+++
T Consensus 121 edSIr~vvk~sNVVINLIGrd---~eTknf~f~Dvn~~~aerlAricke~GVerf----IhvS~Lg--anv~s~Sr~Lrs 191 (391)
T KOG2865 121 EDSIRAVVKHSNVVINLIGRD---YETKNFSFEDVNVHIAERLARICKEAGVERF----IHVSCLG--ANVKSPSRMLRS 191 (391)
T ss_pred HHHHHHHHHHCCEEEEEECCC---CCCCCCCCCCCCCHHHHHHHHHHHHHCHHHE----EEHHHCC--CCCCCHHHHHHH
T ss_conf 799999987475799840353---4458866120014589999999986283525----4165456--654576788776
No 380
>PRK04152 consensus
Probab=21.62 E-value=54 Score=13.27 Aligned_cols=34 Identities=9% Similarity=0.091 Sum_probs=23.1
Q ss_pred CCCEEEEEEEEECCCCCCCHHHHHHHHCCCHHHEEE
Q ss_conf 662099999973588613888999880999768311
Q gi|254780489|r 3 KSSSCILGFGHAVPNQCIHNSIIERHLNLKLGVIEQ 38 (325)
Q Consensus 3 ~~~~~I~g~g~~lP~~~i~n~~l~~~~~~~~~~i~~ 38 (325)
+-+-.|..+..|.|+..+ +++.+++|.+.+.|.+
T Consensus 2 ~~~~~i~~~~~y~~G~~i--~~~~~~~g~~p~~ii~ 35 (364)
T PRK04152 2 KFNEFLNNLKTYEAGKPI--ELVVREYGIDPKDVIK 35 (364)
T ss_pred CCCHHHCCCCCCCCCCCH--HHHHHHHCCCCCCEEE
T ss_conf 705665389998999999--9999982968124788
No 381
>CHL00181 cbbX CbbX; Provisional
Probab=21.59 E-value=55 Score=13.26 Aligned_cols=15 Identities=20% Similarity=0.328 Sum_probs=8.8
Q ss_pred CCCCCHHHHHHHHHC
Q ss_conf 565413899999971
Q gi|254780489|r 254 HQANSRIIQKVCEKI 268 (325)
Q Consensus 254 Hq~~~~~~~~~~~~l 268 (325)
+-+|.+..+.+.++.
T Consensus 236 ~FGNaR~vrnl~e~a 250 (287)
T CHL00181 236 LFANARSVRNAIDRA 250 (287)
T ss_pred CCCCHHHHHHHHHHH
T ss_conf 987489999999999
No 382
>PRK05452 anaerobic nitric oxide reductase flavorubredoxin; Provisional
Probab=21.29 E-value=43 Score=13.93 Aligned_cols=20 Identities=20% Similarity=0.358 Sum_probs=16.8
Q ss_pred CCCCCCCCEEEEEEEEECCC
Q ss_conf 13222344258843100236
Q gi|254780489|r 70 NIKKDSISLTLLATSTPDHL 89 (325)
Q Consensus 70 ~~~~~dId~ii~~s~t~d~~ 89 (325)
-+++++||+||..+.-||+.
T Consensus 66 ~id~~~IDYIIvnH~EpDHS 85 (479)
T PRK05452 66 EIDLADIDYIVINHAEEDHA 85 (479)
T ss_pred HCCCCCCCEEEECCCCCCHH
T ss_conf 45966798899689997547
No 383
>pfam11212 DUF2999 Protein of unknown function (DUF2999). This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
Probab=21.18 E-value=49 Score=13.56 Aligned_cols=43 Identities=9% Similarity=0.242 Sum_probs=24.6
Q ss_pred HHHHHHHHCCCCCCCCEEEE-CCCCCHHHHHHHHHCCCCHHHHH
Q ss_conf 89889974012001224630-56541389999997197865700
Q gi|254780489|r 234 AKQSLRKSDLQPQDINRFIP-HQANSRIIQKVCEKIGLSKRIMV 276 (325)
Q Consensus 234 i~~~l~~~gl~~~did~~i~-Hq~~~~~~~~~~~~lgi~~~~~~ 276 (325)
|-..|++++++-+.|.-++- -.-|..+--.+...||||+||.-
T Consensus 4 Iia~LKehNvSdeqi~elFqalteNP~~AM~~i~qLGip~eKLQ 47 (82)
T pfam11212 4 IIAILKEHNVSDEQIKELFQALTENPLMAMATIQQLGIPPEKLQ 47 (82)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHH
T ss_conf 99999982887999999999985297999999998089999999
No 384
>TIGR00878 purM phosphoribosylformylglycinamidine cyclo-ligase; InterPro: IPR004733 The purine biosynthetic pathway in procaryotes enlists eleven enzymes, six of which use ATP. Enzymes 5 and 6 of this pathway, formylglycinamide ribonucleotide (FGAR) amidotransferase (PurL) and aminoimidazole ribonucleotide (AIR) synthetase (PurM) utilise ATP to activate the oxygen of an amide within their substrate toward nucleophilic attack by a nitrogen. AIR synthetase uses the product of PurL, formylglycinamidine ribonucleotide (FGAM) and ATP to make AIR, ADP and P(i).; GO: 0004641 phosphoribosylformylglycinamidine cyclo-ligase activity, 0006189 'de novo' IMP biosynthetic process, 0005737 cytoplasm.
Probab=21.14 E-value=55 Score=13.25 Aligned_cols=66 Identities=6% Similarity=0.222 Sum_probs=39.6
Q ss_pred CCHHHHHHHCCCH---HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCC-----------CCHHHHHHHHHHCC
Q ss_conf 5145434320100---367898899740120012246305654138999999719-----------78657002185409
Q gi|254780489|r 218 NGADIFYNAVKIM---AQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIG-----------LSKRIMVNSLKDFG 283 (325)
Q Consensus 218 ~g~~v~~~~~~~~---~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lg-----------i~~~~~~~~l~~~G 283 (325)
.|+.|-+..++.- .+-|.+++++ -.||+ =+.|=-+.-+++.+.+.|. .|..++++-+++.|
T Consensus 215 ~gk~lgE~LL~PTRIYVKpiL~li~~----~~ev~-GlAHiTGGGl~eNl~r~L~~~~~a~~D~~~~~~~piF~~i~~~G 289 (338)
T TIGR00878 215 EGKTLGEELLEPTRIYVKPILALIKS----EKEVH-GLAHITGGGLLENLLRRLPDGLKAVIDKGSWPQPPIFKWIQELG 289 (338)
T ss_pred CCCCHHHHHCCCCCCCHHHHHHHHHC----CCCEE-EEEEECCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCC
T ss_conf 67231442238962044789999737----78604-77755164034569986589978998568988316889998608
Q ss_pred CCCCC
Q ss_conf 33000
Q gi|254780489|r 284 NSSSA 288 (325)
Q Consensus 284 N~~sA 288 (325)
|.-..
T Consensus 290 ~V~~~ 294 (338)
T TIGR00878 290 NVEEE 294 (338)
T ss_pred CCCHH
T ss_conf 98755
No 385
>COG1889 NOP1 Fibrillarin-like rRNA methylase [Translation, ribosomal structure and biogenesis]
Probab=21.08 E-value=52 Score=13.41 Aligned_cols=36 Identities=17% Similarity=0.308 Sum_probs=16.3
Q ss_pred CHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEC
Q ss_conf 145434320100367898899740120012246305
Q gi|254780489|r 219 GADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFIPH 254 (325)
Q Consensus 219 g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i~H 254 (325)
.+++|+..+..+.+---+.++..+|.|=|=||.+++
T Consensus 191 p~~vf~~ev~kL~~~~f~i~e~~~LePye~DH~~i~ 226 (231)
T COG1889 191 PEEVFKDEVEKLEEGGFEILEVVDLEPYEKDHALIV 226 (231)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEE
T ss_conf 899999999999856950467763677666428999
No 386
>PRK11921 metallo-beta-lactamase/flavodoxin domain-containing protein; Provisional
Probab=20.95 E-value=43 Score=13.97 Aligned_cols=18 Identities=28% Similarity=0.362 Sum_probs=15.8
Q ss_pred CCCCCCCEEEEEEEEECC
Q ss_conf 322234425884310023
Q gi|254780489|r 71 IKKDSISLTLLATSTPDH 88 (325)
Q Consensus 71 ~~~~dId~ii~~s~t~d~ 88 (325)
+++++||+||..+.-||+
T Consensus 65 i~~~~IdYiVvnH~EPDH 82 (395)
T PRK11921 65 IDLDKIDYIVANHGEIDH 82 (395)
T ss_pred CCCCCCCEEEECCCCCCH
T ss_conf 596569999938999757
No 387
>cd06209 BenDO_FAD_NAD Benzoate dioxygenase reductase (BenDO) FAD/NAD binding domain. Oxygenases oxidize hydrocarbons using dioxygen as the oxidant. As a Class I bacterial dioxygenases, benzoate dioxygenase like proteins combine an [2Fe-2S] cluster containing N-terminal ferredoxin at the end fused to an FAD/NADP(P) domain. In dioxygenase FAD/NAD(P) binding domain, the reductase transfers 2 electrons from NAD(P)H to the oxygenase which insert into an aromatic substrate, an initial step in microbial aerobic degradation of aromatic rings. Flavin oxidoreductases use flavins as substrates, unlike flavoenzymes which have a flavin prosthetic group.
Probab=20.28 E-value=58 Score=13.09 Aligned_cols=39 Identities=15% Similarity=0.329 Sum_probs=23.1
Q ss_pred HHHHHCCCCCCCCEEEECCCCCHHHHHH---HHHCCCCHHHHHH
Q ss_conf 8997401200122463056541389999---9971978657002
Q gi|254780489|r 237 SLRKSDLQPQDINRFIPHQANSRIIQKV---CEKIGLSKRIMVN 277 (325)
Q Consensus 237 ~l~~~gl~~~did~~i~Hq~~~~~~~~~---~~~lgi~~~~~~~ 277 (325)
.+.+..+...+.+.++| +...|++.+ .+++|+|++++..
T Consensus 183 ~l~~~~~~~~~~~~yiC--GP~~m~~~v~~~L~~~Gv~~~~Ih~ 224 (228)
T cd06209 183 HLEAEDLNDGDVDVYLC--GPPPMVDAVRSWLDEQGIEPANFYY 224 (228)
T ss_pred HHHHHCCCCCCCEEEEE--CCHHHHHHHHHHHHHCCCCHHHEEE
T ss_conf 88752478899799995--9999999999999986998899388
No 388
>KOG2112 consensus
Probab=20.22 E-value=58 Score=13.08 Aligned_cols=18 Identities=17% Similarity=0.087 Sum_probs=9.2
Q ss_pred CCCCCHHHHHHHHHHHHC
Q ss_conf 123101256765788743
Q gi|254780489|r 114 ACAGFLYALVMADSYINS 131 (325)
Q Consensus 114 ~C~g~l~aL~~A~~~i~~ 131 (325)
-|.++..+.+...++++.
T Consensus 67 d~~~~~~aa~~i~~Li~~ 84 (206)
T KOG2112 67 DEEGLHRAADNIANLIDN 84 (206)
T ss_pred HHHHHHHHHHHHHHHHHH
T ss_conf 156788999999999998
No 389
>PRK12613 galactose-6-phosphate isomerase subunit LacA; Provisional
Probab=20.18 E-value=58 Score=13.07 Aligned_cols=22 Identities=5% Similarity=-0.074 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99999999999864301322234
Q gi|254780489|r 54 LTDIAIQAGDIALRNANIKKDSI 76 (325)
Q Consensus 54 ~~~la~~Aa~~aL~~a~~~~~dI 76 (325)
-.+|= +..++-|++.|++..|+
T Consensus 11 G~~lK-~~i~~~L~~~g~~v~D~ 32 (141)
T PRK12613 11 GNALK-ELIKSFLQEEGYDIIDV 32 (141)
T ss_pred HHHHH-HHHHHHHHHCCCEEEEC
T ss_conf 49999-99999999879986807
Done!