HHsearch alignment for GI: 254780489 and conserved domain: pfam08392

>pfam08392 FAE1_CUT1_RppA FAE1/Type III polyketide synthase-like protein. The members of this family are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region featured in this family contains the active site residues, as well as motifs involved in substrate binding.
Probab=95.70  E-value=0.057  Score=32.74  Aligned_cols=83  Identities=13%  Similarity=0.216  Sum_probs=37.3

Q ss_pred             HHHHHHHHHHHHCCCCCCCCEEEECC----CCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf             03678988997401200122463056----54138999999719786570021854093300059999999998067899
Q gi|254780489|r  230 MAQSAKQSLRKSDLQPQDINRFIPHQ----ANSRIIQKVCEKIGLSKRIMVNSLKDFGNSSSASIPLSLSLENQRKPFQK  305 (325)
Q Consensus       230 ~~~~i~~~l~~~gl~~~did~~i~Hq----~~~~~~~~~~~~lgi~~~~~~~~l~~~GN~~sAsi~~~L~~~~~~g~i~~  305 (325)
T Consensus        87 ~f~avd~Lf~ktgv~P~dIdiLVvNcSlf~PtPSLsamivNrykmR~di~s~nL---sGMGCSAglIsIdLAk~lL~~~~  163 (290)
T pfam08392        87 MFGAVDELFAKTGVRPRDIGILVVNCSLFNPTPSLSAMIVNRYKMRGDIKSYNL---SGMGCSAGLISIDLAKDLLQVHP  163 (290)
T ss_pred             HHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEECC---CCCCCHHHHHHHHHHHHHHHHCC
T ss_conf             999999999973998768999999677888885289999886068643006336---67651134757999999998489


Q ss_pred             CCEEEEEEEC
Q ss_conf             9899999861
Q gi|254780489|r  306 GEKILTISCR  315 (325)
Q Consensus       306 Gd~vll~~~G  315 (325)
T Consensus       164 ns~ALVvSTE  173 (290)
T pfam08392       164 NTYALVVSTE  173 (290)
T ss_pred             CCEEEEEEEE
T ss_conf             9659999853