HHsearch alignment for GI: 254780489 and conserved domain: pfam08392
>pfam08392 FAE1_CUT1_RppA FAE1/Type III polyketide synthase-like protein. The members of this family are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region featured in this family contains the active site residues, as well as motifs involved in substrate binding.
Probab=95.70 E-value=0.057 Score=32.74 Aligned_cols=83 Identities=13% Similarity=0.216 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEECC----CCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 03678988997401200122463056----54138999999719786570021854093300059999999998067899
Q gi|254780489|r 230 MAQSAKQSLRKSDLQPQDINRFIPHQ----ANSRIIQKVCEKIGLSKRIMVNSLKDFGNSSSASIPLSLSLENQRKPFQK 305 (325)
Q Consensus 230 ~~~~i~~~l~~~gl~~~did~~i~Hq----~~~~~~~~~~~~lgi~~~~~~~~l~~~GN~~sAsi~~~L~~~~~~g~i~~ 305 (325)
T Consensus 87 ~f~avd~Lf~ktgv~P~dIdiLVvNcSlf~PtPSLsamivNrykmR~di~s~nL---sGMGCSAglIsIdLAk~lL~~~~ 163 (290)
T pfam08392 87 MFGAVDELFAKTGVRPRDIGILVVNCSLFNPTPSLSAMIVNRYKMRGDIKSYNL---SGMGCSAGLISIDLAKDLLQVHP 163 (290)
T ss_pred HHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEECC---CCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 999999999973998768999999677888885289999886068643006336---67651134757999999998489
Q ss_pred CCEEEEEEEC
Q ss_conf 9899999861
Q gi|254780489|r 306 GEKILTISCR 315 (325)
Q Consensus 306 Gd~vll~~~G 315 (325)
T Consensus 164 ns~ALVvSTE 173 (290)
T pfam08392 164 NTYALVVSTE 173 (290)
T ss_pred CCEEEEEEEE
T ss_conf 9659999853