HHsearch alignment for GI: 254780489 and conserved domain: smart00825
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.41 E-value=1.5e-12 Score=101.93 Aligned_cols=222 Identities=19% Similarity=0.234 Sum_probs=131.7
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCE----EEEEEEEECCC--------------C----CC-CCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999986430132223442----58843100236--------------8----87-43221121002386333421
Q gi|254780489|r 56 DIAIQAGDIALRNANIKKDSISL----TLLATSTPDHL--------------L----PP-SSPLITHRLGLMQSGAIDLT 112 (325)
Q Consensus 56 ~la~~Aa~~aL~~a~~~~~dId~----ii~~s~t~d~~--------------~----P~-~a~~v~~~Lg~~~~~~~di~ 112 (325)
T Consensus 89 rl~L~~a~~Al~dAG~~~~~l~~~r~GV~vG~~~~d~~~~~~~~~~~~~~~~~~~~~~s~~a~ris~~~~l~G-p~~~vd 167 (424)
T smart00825 89 RLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLRG-PSVTVD 167 (424)
T ss_pred HHHHHHHHHHHHHCCCCHHHCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-CEEEEC
T ss_conf 9999999999997399835658874389997516637777641755578520245317689999999858999-635141
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCE-EEEEEECCC-CC----------CCC------CCC-CCCCCCCCCCEEEEEECCCCC
Q ss_conf 01231012567657887438850-588620122-44----------446------222-443432544200112205765
Q gi|254780489|r 113 GACAGFLYALVMADSYINSHQKP-VLIIAANLL-SR----------RIN------LED-KDTAIIFGDAAGAVVLAPSPL 173 (325)
Q Consensus 113 ~~C~g~l~aL~~A~~~i~~g~~~-vLVv~~e~~-S~----------~~d------~~d-~~~~~lfGDgA~A~il~~~~~ 173 (325)
T Consensus 168 tACsSsl~Al~~A~~~i~~G~~D~alvGg~~~~~~p~~~~~~~~~~~lS~~g~~rpFD~~adG~v~gEGa~~lvLk~l~~ 247 (424)
T smart00825 168 TACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADADGYVRGEGVGVVVLKRLSD 247 (424)
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHH
T ss_conf 47289999999999999769963300142667348789999861578799998755778899841047657997465999
Q ss_pred C--CCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEE
Q ss_conf 4--44531135532136776527830698667654455655232245145434320100367898899740120012246
Q gi|254780489|r 174 K--DKSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQDINRF 251 (325)
Q Consensus 174 ~--~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~ 251 (325)
T Consensus 248 A~~~g~~Iya~I~G~-~~~~d------G----------~~~~~~~P~~--------~~~~~~~~~Al~~a~i~p~~I~yi 302 (424)
T smart00825 248 ALRDGDPILAVIRGS-AVNQD------G----------RSNGLTAPSG--------PAQARLIRQALARAGVDPADVDYV 302 (424)
T ss_pred HHHCCCCEEEEEECE-EEECC------C----------CCCCCCCCCH--------HHHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 987699179999343-78258------9----------8787789998--------999999999999829896646879
Q ss_pred EECCCCCHH-----HHHHHHHCCCC--HHH-H-HH-HHHHCCCCCCCHHHHHHHH---HHHHCCC
Q ss_conf 305654138-----99999971978--657-0-02-1854093300059999999---9980678
Q gi|254780489|r 252 IPHQANSRI-----IQKVCEKIGLS--KRI-M-VN-SLKDFGNSSSASIPLSLSL---ENQRKPF 303 (325)
Q Consensus 252 i~Hq~~~~~-----~~~~~~~lgi~--~~~-~-~~-~l~~~GN~~sAsi~~~L~~---~~~~g~i 303 (325)
T Consensus 303 eaHgtgt~~gD~~E~~al~~~f~~~~~~~~~~~igS~K~~~GH~~~AaG~~~lik~~lal~~~~i 367 (424)
T smart00825 303 EAHGTGTPLGDPIEAEALAAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLIKVVLALRHGTI 367 (424)
T ss_pred EECCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 96036687779999999999962368877842520453442333777899999999999856970