HHsearch alignment for GI: 254780490 and conserved domain: COG0582

>COG0582 XerC Integrase [DNA replication, recombination, and repair].

Probab=98.51  E-value=2.6e-07  Score=58.43  Aligned_cols=54  Identities=44%  Similarity=0.605  Sum_probs=41.3

Q ss_pred             CCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHH-HCCHHHHHHHHHHH
Q ss_conf             21603638999999998089999999984888889999998-63999999999995
Q gi|254780490|r    2 STTAHTLRHSFATHLLSNGGDLRSIQSILGHSRLSTTQIYT-NVNSKRMMEIYDQT   56 (67)
Q Consensus         2 ~~tpH~lRHt~at~l~~~G~~~~~vq~lLGH~~i~tT~~Y~-~~~~~~~~~~~~~~   56 (67)
T Consensus       248 ~~~~h~lRht~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~~~~~~  302 (309)
T COG0582         248 KITPHGLRHTFATLLLAGG-DERVIQKLLGHASLNTTQTVYYHASDERLKEAALKL  302 (309)
T ss_pred             CCCCCCCHHHHHHHHHHCC-CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             8787740789999998568-765899983787087899999987106678999864