HHsearch alignment for GI: 254780490 and conserved domain: COG4974
>COG4974 XerD Site-specific recombinase XerD [DNA replication, recombination, and repair].
Probab=99.91 E-value=5e-25 Score=149.63 Aligned_cols=59 Identities=58% Similarity=0.957 Sum_probs=57.4
Q ss_pred CCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCHHH
Q ss_conf 21603638999999998089999999984888889999998639999999999958211
Q gi|254780490|r 2 STTAHTLRHSFATHLLSNGGDLRSIQSILGHSRLSTTQIYTNVNSKRMMEIYDQTHPSI 60 (67)
Q Consensus 2 ~~tpH~lRHt~at~l~~~G~~~~~vq~lLGH~~i~tT~~Y~~~~~~~~~~~~~~~~p~~ 60 (67)
T Consensus 242 ~isPH~LRHsFATHLL~~GADlRvVQeLLGHadisTTQIYTHV~~e~L~~~~~~~HPra 300 (300)
T COG4974 242 KISPHTLRHSFATHLLENGADLRVVQELLGHADISTTQIYTHVTKERLRDLYAQHHPRA 300 (300)
T ss_pred CCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 86813657889999986785399999984866501557879988999999999738999