HHsearch alignment for GI: 254780490 and conserved domain: TIGR02224
>TIGR02224 recomb_XerC tyrosine recombinase XerC; InterPro: IPR011931 The phage integrase family describes a number of recombinases with tyrosine active sites that transiently bind covalently to DNA. Many are associated with mobile DNA elements, including phage, transposons, and phase variation loci. This entry represents XerC, which is closely related to the other chromosomal protein XerD (IPR011932 from INTERPRO). XerC and XerD are site-specific recombinases which help resolve chromosome dimers to monomers for cell division after DNA replication. XerC and XerD interact with cell division protein FtsK .; GO: 0003677 DNA binding, 0006310 DNA recombination, 0007049 cell cycle, 0007059 chromosome segregation, 0015074 DNA integration, 0051301 cell division.
Probab=99.97 E-value=1.8e-32 Score=187.88 Aligned_cols=61 Identities=54% Similarity=0.932 Sum_probs=59.4
Q ss_pred CCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCHHHHH
Q ss_conf 2160363899999999808999999998488888999999863999999999995821133
Q gi|254780490|r 2 STTAHTLRHSFATHLLSNGGDLRSIQSILGHSRLSTTQIYTNVNSKRMMEIYDQTHPSITQ 62 (67)
Q Consensus 2 ~~tpH~lRHt~at~l~~~G~~~~~vq~lLGH~~i~tT~~Y~~~~~~~~~~~~~~~~p~~~~ 62 (67)
T Consensus 253 ~~hPH~LRHSFATHLL~~gaDLRaVQELLGH~SLSTTQiYTHv~~~~L~~~Y~~AHPRA~k 313 (313)
T TIGR02224 253 HVHPHALRHSFATHLLENGADLRAVQELLGHASLSTTQIYTHVDFQHLAKVYDKAHPRAKK 313 (313)
T ss_pred CCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 6787531131799997468835589897444643566798884099999999973777779