HHsearch alignment of GI: 254780490 and MMDB domain: 1ae9_A_

>1ae9_A (A:) Lambda integrase; DNA recombination, site-specific recombination; 1.90A {Bacteriophage lambda}

Probab=99.03  E-value=9.1e-12  Score=81.08  Aligned_cols=50  Identities=12%  Similarity=0.141  Sum_probs=45.5

Q ss_pred             CCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHH
Q ss_conf             21603638999999998089999999984888889999998639999999
Q gi|254780490|r    2 STTAHTLRHSFATHLLSNGGDLRSIQSILGHSRLSTTQIYTNVNSKRMME   51 (67)
Q Consensus         2 ~~tpH~lRHt~at~l~~~G~~~~~vq~lLGH~~i~tT~~Y~~~~~~~~~~   51 (67)
                      ..++|.+||++++.+.++|+|+..||++|||++++||++|++++.+++++
T Consensus       127 ~~~~~~~r~~~~~~~~~~g~~~~~i~~~lGH~~~~tT~~Y~~~~~~~~~~  176 (179)
T 1ae9_A          127 DPPTFHELRSLSARLYEKQISDKFAQHLLGHKSDTMASQFRDDRGREWDK  176 (179)
T ss_dssp             SCCCTTHHHHHHHHHHHHHTCHHHHHHHHTC--------CEECSSCEEEE
T ss_pred             CHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHH
T ss_conf             30268899888999999499999999993899999999987367876862