HHsearch results for GI: 254780490 and protein with PDBid: 3nkh_A

>3nkh_A Integrase; alpha-fold, MRSA protein, structural genomics, PSI-2, protei structure initiative; 2.50A {Staphylococcus aureus subsp}

Probab=99.53  E-value=6.3e-15  Score=96.52  Aligned_cols=57  Identities=30%  Similarity=0.470  Sum_probs=52.8

Q ss_pred             CCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHH-HHHHHCCHHHHHHHHHHHCH
Q ss_conf             2160363899999999808999999998488888999-99986399999999999582
Q gi|254780490|r    2 STTAHTLRHSFATHLLSNGGDLRSIQSILGHSRLSTT-QIYTNVNSKRMMEIYDQTHP   58 (67)
Q Consensus         2 ~~tpH~lRHt~at~l~~~G~~~~~vq~lLGH~~i~tT-~~Y~~~~~~~~~~~~~~~~p   58 (67)
                      +++||+|||||||.++++|+|+..||.+|||+|+++| .+|++++++..+++++++..
T Consensus       183 ~~~~H~lRht~at~l~~~g~~~~~i~~~lGH~s~~~t~~~Y~~~~~~~~~~~~~ki~~  240 (244)
T 3nkh_A          183 EVSSHILRHSHISLLSQQGVSLKAIMDRVGHSDHRTTLSIYSHVTEQMDKDMMNKLEQ  240 (244)
T ss_dssp             CCSHHHHHHHHHHHHHHTTCCHHHHHHHHCSTTHHHHHHHHHHHHHHHHHTHHHHHHT
T ss_pred             CCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf             4676334899999999869999999998389988999998446799999999999887