HHsearch alignment for GI: 254780491 and conserved domain: TIGR03406
>TIGR03406 FeS_long_SufT probable FeS assembly SUF system protein SufT. The function is unknown for this protein family, but members are found almost always in operons for the the SUF system of iron-sulfur cluster biosynthesis. The SUF system is present elsewhere on the chromosome for those few species where SUF genes are not adjacent. This family shares this property of association with the SUF system with a related family, TIGR02945. TIGR02945 consists largely of a DUF59 domain (see pfam01883), while this protein is about double the length, with a unique N-terminal domain and DUF59 C-terminal domain. A location immediately downstream of the cysteine desulfurase gene sufS in many contexts suggests the gene symbol sufT. Note that some other homologs of this family and of TIGR02945, but no actual members of this family, are found in operons associated with phenylacetic acid (or other ring-hydroxylating) degradation pathways.
Probab=99.67 E-value=1.2e-16 Score=114.63 Aligned_cols=91 Identities=14% Similarity=0.115 Sum_probs=84.1
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCC-----CCEEEEEEEECHHHCHHHHHHHHHHHHHHHCCCCCCCEEE
Q ss_conf 03589999998414187999762323870101336-----9879999996722220689999999999853985340699
Q gi|254780491|r 3 QILKNQIVDSLKVLSIPGEKNNIVEMQRLSEIFIV-----HNTVYLSITVPHTIAHQLQSLRSNAQQIIQNIPTVKNAVV 77 (101)
Q Consensus 3 ~~~~~~I~~~L~~v~dP~~~~~iv~~g~V~~i~i~-----~~~v~i~l~l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V 77 (101)
T Consensus 72 ~~~E~~vweaLk~V~DPEIpVnIVdLGLIY~v~i~~~~~~~~~V~I~MTLTapgCpmg~~i~~dv~~~v~~v~~v~~v~V 151 (174)
T TIGR03406 72 EDNEDQVWEQLRTVYDPEIPVNIVDLGLVYGCRVEKLGEGQFRVDIEMTLTAPGCGMGPVLVEDVEDKVLAVPNVDEVEV 151 (174)
T ss_pred CHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEE
T ss_conf 42099999998415598887544863025799987647889779999960479998317999999999977999664999
Q ss_pred EEEECCCCCCCCCCCC
Q ss_conf 9970789873215699
Q gi|254780491|r 78 TLTENKNPPQQRNNLN 93 (101)
Q Consensus 78 ~lt~~~~~~~~~~~~g 93 (101)
T Consensus 152 elV~dPpW~~dmmSee 167 (174)
T TIGR03406 152 ELVFDPPWSREMMSEA 167 (174)
T ss_pred EEEECCCCCHHHCCHH
T ss_conf 9998899893347799