Query         gi|254780491|ref|YP_003064904.1| Mrp protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 101
No_of_seqs    106 out of 1506
Neff          7.9 
Searched_HMMs 33803
Date          Wed Jun  1 13:20:17 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780491.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 >3cq1_A Putative uncharacteriz  99.8 7.6E-20 2.3E-24  132.3   7.2   95    1-95      3-97  (103)
  2 >1uwd_A Hypothetical protein T  99.8 3.9E-18 1.1E-22  122.7   8.6   83    3-85      5-88  (88)
  3 >3lno_A Putative uncharacteriz  99.7 2.4E-18 7.2E-23  123.8   5.8   85    2-86      6-92  (92)
  4 >1th5_A NIFU1; iron-sulfur clu  83.2    0.72 2.1E-05   25.5   2.2   69    1-75      1-70  (74)
  5 >2z51_A NIFU-like protein 2, c  81.6     1.2 3.6E-05   24.2   2.9   71    3-77      3-75  (81)
  6 >1veh_A NIFU-like protein hiri  77.6    0.84 2.5E-05   25.1   1.0   70    5-77     14-85  (92)
  7 >1xhj_A Nitrogen fixation prot  76.6     4.5 0.00013   21.0   4.5   73    5-81      8-82  (88)
  8 >2z51_A NIFU-like protein 2, c  67.6     9.9 0.00029   19.1   6.4   66    4-76      4-71  (73)
  9 >3io1_A Aminobenzoyl-glutamate  64.4     9.5 0.00028   19.2   3.9   74    7-80     34-110 (120)
 10 >1mwy_A ZNTA; open-faced beta-  62.1     6.3 0.00019   20.2   2.7   39   38-82      2-41  (73)
 11 >2g9o_A Copper-transporting AT  60.2     7.7 0.00023   19.7   2.9   37   42-81      4-40  (90)
 12 >3dxs_X Copper-transporting AT  59.8     8.8 0.00026   19.4   3.1   37   43-82      4-40  (74)
 13 >1yj7_A ESCJ; mixed alpha/beta  59.1      13 0.00038   18.4   3.9   33   52-84     17-49  (103)
 14 >1p6t_A Potential copper-trans  58.7     8.6 0.00026   19.4   2.9   41   39-82      4-44  (72)
 15 >3cjk_B Copper-transporting AT  58.5     9.8 0.00029   19.1   3.2   38   42-82      3-40  (75)
 16 >1aw0_A Menkes copper-transpor  57.5     9.3 0.00028   19.2   2.9   24   59-82     18-41  (72)
 17 >2aj0_A Probable cadmium-trans  57.4     7.7 0.00023   19.7   2.5   24   59-82     18-41  (71)
 18 >1opz_A Potential copper-trans  56.9     8.6 0.00025   19.4   2.6   39   41-82      6-44  (76)
 19 >1qup_A Superoxide dismutase 1  56.5     4.6 0.00014   20.9   1.2   37   40-82      7-43  (73)
 20 >2ew9_A Copper-transporting AT  55.3      11 0.00032   18.9   2.9   38   42-82      5-42  (73)
 21 >1kvi_A Copper-transporting AT  54.2      14 0.00042   18.2   3.4   42   37-81      4-45  (79)
 22 >1yg0_A COP associated protein  54.1     6.5 0.00019   20.1   1.7   37   43-82      3-39  (66)
 23 >2rop_A Copper-transporting AT  51.9      12 0.00037   18.5   2.8   43   37-82     14-56  (98)
 24 >1osd_A MERP, hypothetical pro  49.8     7.1 0.00021   19.9   1.3   39   42-83      4-42  (72)
 25 >2kkh_A Putative heavy metal t  48.6      18 0.00052   17.7   3.1   46   35-83     10-55  (95)
 26 >2roe_A Heavy metal binding pr  47.8     9.4 0.00028   19.2   1.7   25   58-82     14-38  (66)
 27 >2crl_A Copper chaperone for s  47.6     8.6 0.00025   19.4   1.4   37   39-81     19-55  (98)
 28 >2qif_A Copper chaperone COPZ;  44.8      25 0.00073   16.8   3.5   35   43-80      4-38  (69)
 29 >2ew9_A Copper-transporting AT  44.0      11 0.00033   18.7   1.6   36   40-81      5-41  (76)
 30 >1a6d_A Thermosome (alpha subu  43.4      21 0.00063   17.2   2.9   65    5-69     25-96  (102)
 31 >1a6d_B Thermosome (beta subun  43.0      16 0.00047   17.9   2.2   65    5-69     26-98  (104)
 32 >1q8l_A Copper-transporting AT  42.4      13 0.00038   18.4   1.7   40   38-80      6-45  (84)
 33 >1sb6_A Copper chaperone scatx  42.3     7.4 0.00022   19.8   0.4   24   59-82     16-39  (64)
 34 >1cpz_A Protein (COPZ); copper  41.1      12 0.00034   18.7   1.3   35   44-81      3-37  (68)
 35 >1cc8_A Protein (metallochaper  40.7      12 0.00036   18.6   1.3   37   40-82      6-43  (73)
 36 >2k2p_A Uncharacterized protei  39.5      16 0.00047   17.9   1.8   43   37-82     18-60  (85)
 37 >1jk9_B CCS, copper chaperone   39.4      13 0.00037   18.5   1.2   36   40-81      8-43  (76)
 38 >1p6t_A Potential copper-trans  39.2      16 0.00047   17.9   1.7   36   42-80      3-38  (79)
 39 >2rop_A Copper-transporting AT  38.6      22 0.00064   17.2   2.3   40   40-82     19-58  (104)
 40 >1jww_A Potential copper-trans  37.2      15 0.00044   18.1   1.3   36   43-81      5-40  (80)
 41 >1fvq_A Copper-transporting AT  36.2      24 0.00071   16.9   2.3   35   43-80      4-38  (72)
 42 >2gcf_A Cation-transporting AT  36.1      11 0.00031   18.9   0.4   35   41-81      5-40  (73)
 43 >1yjr_A Copper-transporting AT  34.6      16 0.00048   17.9   1.2   23   59-81     19-41  (75)
 44 >1y3j_A Copper-transporting AT  34.3      18 0.00053   17.6   1.4   37   42-81      4-40  (77)
 45 >1q3q_A Thermosome alpha subun  29.5      36  0.0011   15.9   2.3   65    5-69     26-99  (105)
 46 >1ysj_A Protein YXEP; M20 fami  24.7      54  0.0016   14.9   4.2   73    8-80     37-115 (128)
 47 >1pjq_A CYSG, siroheme synthas  24.2      49  0.0015   15.1   2.2   32   35-66      8-39  (41)
 48 >2j8s_A ACRB, acriflavine resi  23.0      59  0.0017   14.7   6.2   45   37-81    103-148 (208)
 49 >2d5w_A Peptide ABC transporte  22.6      60  0.0018   14.7   2.6   50    3-52     36-86  (90)
 50 >2f7v_A Aectylcitrulline deace  21.3      64  0.0019   14.5   4.5   56   26-81     62-120 (122)
 51 >2ofg_X Zinc-transporting ATPa  20.4      13 0.00039   18.4  -1.4   31   47-83     12-42  (111)

No 1  
>>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A* (A:)
Probab=99.80  E-value=7.6e-20  Score=132.27  Aligned_cols=95  Identities=16%  Similarity=0.164  Sum_probs=90.1

Q ss_pred             CCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCEEEEEEEECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEE
Q ss_conf             96035899999984141879997623238701013369879999996722220689999999999853985340699997
Q gi|254780491|r    1 MNQILKNQIVDSLKVLSIPGEKNNIVEMQRLSEIFIVHNTVYLSITVPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLT   80 (101)
Q Consensus         1 Ms~~~~~~I~~~L~~v~dP~~~~~iv~~g~V~~i~i~~~~v~i~l~l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt   80 (101)
                      |+..++++|+++|++|.||++++||+++|+|+++.+++++|.|.|.+++++|+.++.++++++++|+.++|+++|+|.++
T Consensus         3 ~~~~~~~~i~~aL~~V~DP~~~~~Iv~lg~V~~i~i~~~~V~v~l~l~~~~~~~~~~i~~~i~~~l~~l~gv~~V~V~~~   82 (103)
T 3cq1_A            3 ARNPLEAQAWALLEAVYDPELGLDVVNLGLIYDLVVEPPRAYVRXTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVT   82 (103)
T ss_dssp             CCSHHHHHHHHHHTTCBCTTTCSBTTTTTCEEEEEEETTEEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEEC
T ss_pred             CCCHHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEE
T ss_conf             88378999999981688989998844457721578865835728807999986789999999999981899750899999


Q ss_pred             ECCCCCCCCCCCCCC
Q ss_conf             078987321569985
Q gi|254780491|r   81 ENKNPPQQRNNLNVK   95 (101)
Q Consensus        81 ~~~~~~~~~~~~gvK   95 (101)
                      ++.+|...+..+..|
T Consensus        83 ~~~~~~~~~~~~~~r   97 (103)
T 3cq1_A           83 FEPPWTLARLSEKAR   97 (103)
T ss_dssp             CSSCCCGGGCCSGGG
T ss_pred             ECCCCCHHHCCHHHH
T ss_conf             669999577759999


No 2  
>>1uwd_A Hypothetical protein TM0487; structural genomics, unknown function, contains PAAD domain, similar to PAAD protein, unknown activity; NMR {Thermotoga maritima} (A:1-88)
Probab=99.75  E-value=3.9e-18  Score=122.68  Aligned_cols=83  Identities=22%  Similarity=0.223  Sum_probs=80.2

Q ss_pred             CCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCC-CEEEEEEEECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
Q ss_conf             035899999984141879997623238701013369-8799999967222206899999999998539853406999970
Q gi|254780491|r    3 QILKNQIVDSLKVLSIPGEKNNIVEMQRLSEIFIVH-NTVYLSITVPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLTE   81 (101)
Q Consensus         3 ~~~~~~I~~~L~~v~dP~~~~~iv~~g~V~~i~i~~-~~v~i~l~l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt~   81 (101)
                      ..++++|+++|++|.||++++||+++|+|+++.+++ |+|.|.|++++++|+.++.++.+++++|++++|+++|+|.+++
T Consensus         5 ~~t~~~V~~aL~~v~DP~~~~div~lg~V~~i~v~~dg~V~v~i~l~~~~~~~~~~l~~~i~~~l~~l~gv~~v~V~~~~   84 (88)
T 1uwd_A            5 KVTKEDVLNALKNVIDFELGLDVVSLGLVYDIQIDDQNNVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELTF   84 (88)
T ss_dssp             CCCHHHHHHHHTTCBCTTTSSBTTTTTCCCCEEECTTCEEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEECC
T ss_pred             CCCHHHHHHHHHCCCCCCCCCCEEECCEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEE
T ss_conf             27899999998568899999371443604456651456536888637899962899999999999738997508999996


Q ss_pred             CCCC
Q ss_conf             7898
Q gi|254780491|r   82 NKNP   85 (101)
Q Consensus        82 ~~~~   85 (101)
                      |.+|
T Consensus        85 ~~pw   88 (88)
T 1uwd_A           85 DPPW   88 (88)
T ss_dssp             SSCC
T ss_pred             CCCC
T ss_conf             3999


No 3  
>>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} (A:1-92)
Probab=99.74  E-value=2.4e-18  Score=123.82  Aligned_cols=85  Identities=15%  Similarity=0.230  Sum_probs=80.2

Q ss_pred             CCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCC-CCEEEEEEEECHHHCHHHHHHHHHHHHHHH-CCCCCCCEEEEE
Q ss_conf             603589999998414187999762323870101336-987999999672222068999999999985-398534069999
Q gi|254780491|r    2 NQILKNQIVDSLKVLSIPGEKNNIVEMQRLSEIFIV-HNTVYLSITVPHTIAHQLQSLRSNAQQIIQ-NIPTVKNAVVTL   79 (101)
Q Consensus         2 s~~~~~~I~~~L~~v~dP~~~~~iv~~g~V~~i~i~-~~~v~i~l~l~~~~~~~~~~l~~~i~~~l~-~i~gv~~v~V~l   79 (101)
                      ...++++|+++|++|+||++|+||+++|+|+++.++ +|+|+|.|++++++|+....++++++++|+ .++|+.+|+|.+
T Consensus         6 ~~~~~~~V~~aL~~V~DP~~g~div~lglV~~i~v~~~~~V~v~l~lt~p~~~~~~~i~~~i~~al~~~l~gv~~v~V~~   85 (92)
T 3lno_A            6 QEAFENKLYANLEAVIDPELGVDIVNLGLVYDVTADENNNAVITXTXTSIGCPXAGQIVSDVKKVLSTNVPEVNEIEVNV   85 (92)
T ss_dssp             HHHHHHHHHHHGGGCEETTTTEEHHHHTCEEEEEECTTCCEEEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEE
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCHHHCCCEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf             78899999999808889999989445587577897449979999995899977699999999999997389974399999


Q ss_pred             EECCCCC
Q ss_conf             7078987
Q gi|254780491|r   80 TENKNPP   86 (101)
Q Consensus        80 t~~~~~~   86 (101)
                      ++|++|.
T Consensus        86 ~~~ppwt   92 (92)
T 3lno_A           86 VWNPPWS   92 (92)
T ss_dssp             CCSSCCC
T ss_pred             EECCCCC
T ss_conf             9679999


No 4  
>>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} (A:)
Probab=83.20  E-value=0.72  Score=25.46  Aligned_cols=69  Identities=13%  Similarity=0.185  Sum_probs=49.9

Q ss_pred             CCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCEEEEEEEECHHHCHHHH-HHHHHHHHHHHCCCCCCCE
Q ss_conf             96035899999984141879997623238701013369879999996722220689-9999999998539853406
Q gi|254780491|r    1 MNQILKNQIVDSLKVLSIPGEKNNIVEMQRLSEIFIVHNTVYLSITVPHTIAHQLQ-SLRSNAQQIIQNIPTVKNA   75 (101)
Q Consensus         1 Ms~~~~~~I~~~L~~v~dP~~~~~iv~~g~V~~i~i~~~~v~i~l~l~~~~~~~~~-~l~~~i~~~l~~i~gv~~v   75 (101)
                      |-+.+.+.|.++|..+.-|-...|   -|-++=+.+++|.|.+.|.=....|+... .+.+.+++.   +|++..|
T Consensus         1 ml~~~~~~I~~~L~~irp~l~~~d---GGdielv~v~~~~V~V~l~GaC~gCpTl~~~Ie~~L~~~---ipei~~V   70 (74)
T 1th5_A            1 MLELNEENVEKVLNEIRPYLAGTG---GGGLQFLMIKGPIVKVRLTGPAAVVRTVRIAVSKKLREK---IPSIQIV   70 (74)
T ss_dssp             CCCCSHHHHHHHHTTTHHHHTTTT---CCCCCCCEEETTEEEECCCSSSSSSSSHHHHHHHHHHHH---CTTCSEE
T ss_pred             CCCCCHHHHHHHHHHHCHHHHHCC---CCEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHH---CCCCCEE
T ss_conf             976689999999998563040268---971999995299999995588765405999999999987---9984089


No 5  
>>2z51_A NIFU-like protein 2, chloroplast; CNFU, iron-sulfur cluster biosynthesis, metal transport; 1.35A {Arabidopsis thaliana} PDB: 2jnv_A (A:1-81)
Probab=81.65  E-value=1.2  Score=24.20  Aligned_cols=71  Identities=10%  Similarity=0.105  Sum_probs=56.5

Q ss_pred             CCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCEEEEEEEECHHHCHHHH-HHHHHHHHHHHC-CCCCCCEEE
Q ss_conf             035899999984141879997623238701013369879999996722220689-999999999853-985340699
Q gi|254780491|r    3 QILKNQIVDSLKVLSIPGEKNNIVEMQRLSEIFIVHNTVYLSITVPHTIAHQLQ-SLRSNAQQIIQN-IPTVKNAVV   77 (101)
Q Consensus         3 ~~~~~~I~~~L~~v~dP~~~~~iv~~g~V~~i~i~~~~v~i~l~l~~~~~~~~~-~l~~~i~~~l~~-i~gv~~v~V   77 (101)
                      +.+.+.|..+|..|+ |.+..|   -|-++=+.+++|.|.+.|.=....|+... .++..++..|.. +|++..|..
T Consensus         3 ~~~~~~i~~~le~IR-P~L~~d---GGdi~lv~v~~g~V~V~l~GaC~gC~~s~~Tl~~~Ie~~L~~~~p~~~~V~~   75 (81)
T 2z51_A            3 PLTEENVESVLDEIR-PYLMSD---GGNVALHEIDGNVVRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEA   75 (81)
T ss_dssp             CSCHHHHHHHHHHHH-HHHHHT---TEEEEEEEEETTEEEEEEEHHHHTCHHHHHHHHHHHHHHHHHHCTTCCEEEE
T ss_pred             CCCHHHHHHHHHHHC-HHHHHC---CCEEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             878999999999856-798855---9847999801998999982687899437999999999999999875311100


No 6  
>>1veh_A NIFU-like protein hirip5; structural genomics, mouse cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} (A:)
Probab=77.57  E-value=0.84  Score=25.10  Aligned_cols=70  Identities=19%  Similarity=0.123  Sum_probs=56.2

Q ss_pred             CHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCEEEEEEEECHHHCHHHH-HHHHHHHHHHHC-CCCCCCEEE
Q ss_conf             5899999984141879997623238701013369879999996722220689-999999999853-985340699
Q gi|254780491|r    5 LKNQIVDSLKVLSIPGEKNNIVEMQRLSEIFIVHNTVYLSITVPHTIAHQLQ-SLRSNAQQIIQN-IPTVKNAVV   77 (101)
Q Consensus         5 ~~~~I~~~L~~v~dP~~~~~iv~~g~V~~i~i~~~~v~i~l~l~~~~~~~~~-~l~~~i~~~l~~-i~gv~~v~V   77 (101)
                      +.+.|.++|..-.-|.+..|   -|-++=+.+++|.|.+.|.=....|+... .++..+++.|.. +|++..|.-
T Consensus        14 ~~~~i~~~l~~~IrP~l~~d---GGdi~lv~v~~g~v~v~l~GaC~gCp~s~~Tl~~~Ie~~L~~~~p~v~~V~~   85 (92)
T 1veh_A           14 VVAMIKELLDTRIRPTVQED---GGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFYIPEVEGVEQ   85 (92)
T ss_dssp             HHHHHHHHHHHTTHHHHHHH---SCCCCEEEEETTEEEECCCCCCCCCHHHHHHTHHHHHHHHHHHCSSCCCEEE
T ss_pred             HHHHHHHHHHHHCCHHHHHC---CCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf             99999999998417678966---9976999960887899827878998408999999999999997898665987


No 7  
>>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structure initiative, NESG, PSI; NMR {Staphylococcus epidermidis atcc 12228} (A:)
Probab=76.64  E-value=4.5  Score=21.00  Aligned_cols=73  Identities=12%  Similarity=0.166  Sum_probs=56.3

Q ss_pred             CHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCEEEEEEEECHHHCHHHH-HHHHHHHHHHHC-CCCCCCEEEEEEE
Q ss_conf             5899999984141879997623238701013369879999996722220689-999999999853-9853406999970
Q gi|254780491|r    5 LKNQIVDSLKVLSIPGEKNNIVEMQRLSEIFIVHNTVYLSITVPHTIAHQLQ-SLRSNAQQIIQN-IPTVKNAVVTLTE   81 (101)
Q Consensus         5 ~~~~I~~~L~~v~dP~~~~~iv~~g~V~~i~i~~~~v~i~l~l~~~~~~~~~-~l~~~i~~~l~~-i~gv~~v~V~lt~   81 (101)
                      +.+.|.++|..|+ |.+..|   -|-++=+.+++|.|.+.|.=....|+... .++..+++.|.. +|++..|.-....
T Consensus         8 ~~~~I~~~Le~IR-P~L~~d---GGdv~lv~v~~g~v~Vrl~GaC~gC~~s~~Tl~~~Ie~~L~~~ip~~~~V~~v~~~   82 (88)
T 1xhj_A            8 MFDQVAEVIERLR-PFLLRD---GGDCTLVDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHEEVPGVIEVEQVFLE   82 (88)
T ss_dssp             HHHHHHHHHHHHH-HHHHHH---SCEEEEEECCSSEEEEEEESSCCSSCHHHHHHHHHHHHHHHHHSTTCCEEEEEECC
T ss_pred             HHHHHHHHHHHHH-HHHHHC---CCCEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECC
T ss_conf             9999999999866-899967---99679986679999999647888980189999999999999878997779997531


No 8  
>>2z51_A NIFU-like protein 2, chloroplast; CNFU, iron-sulfur cluster biosynthesis, metal transport; 1.35A {Arabidopsis thaliana} PDB: 2jnv_A (A:82-154)
Probab=67.58  E-value=9.9  Score=19.08  Aligned_cols=66  Identities=20%  Similarity=0.222  Sum_probs=47.9

Q ss_pred             CCHHHHHHHHHHCCCCCCCCCHHHC-CCCCCCCCCCCEEEEEEEECHHHCHHHHHHHHHHHHHHH-CCCCCCCEE
Q ss_conf             3589999998414187999762323-870101336987999999672222068999999999985-398534069
Q gi|254780491|r    4 ILKNQIVDSLKVLSIPGEKNNIVEM-QRLSEIFIVHNTVYLSITVPHTIAHQLQSLRSNAQQIIQ-NIPTVKNAV   76 (101)
Q Consensus         4 ~~~~~I~~~L~~v~dP~~~~~iv~~-g~V~~i~i~~~~v~i~l~l~~~~~~~~~~l~~~i~~~l~-~i~gv~~v~   76 (101)
                      ...+.|.++|..|+ |.+..|   - |-++=+.++++.|.+.|.=....|+..   +..+++.|. .+|++..|.
T Consensus         4 ~~~~~I~~~L~~iR-P~L~~D---ggGdielv~v~~~~V~v~l~GaC~gCpTl---~~~Ie~~l~~~ip~i~~V~   71 (73)
T 2z51_A            4 LNEENIEKVLEEIR-PYLIGT---ADGSLDLVEIEDPIVKIRITGPAAGVMTV---RVAVTQKLREKIPSIAAVQ   71 (73)
T ss_dssp             SSHHHHHHHHHHHG-GGCCGG---GCCEEEEEEEETTEEEEEEESGGGGCHHH---HHHHHHHHHHHCTTCCEEE
T ss_pred             CHHHHHHHHHHCCC-CCCCCC---CCCEEEEEEEECCEEEEEECCCCCCCCCH---HHHHHHHHHHHCCCCCEEE
T ss_conf             00245566543035-887778---88539999996998999965886677539---9999999998699961899


No 9  
>>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp} (A:225-344)
Probab=64.38  E-value=9.5  Score=19.17  Aligned_cols=74  Identities=14%  Similarity=0.079  Sum_probs=55.2

Q ss_pred             HHHHHHHHHCCCCCCCCCHHHCCCCCC---CCCCCCEEEEEEEECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEE
Q ss_conf             999999841418799976232387010---13369879999996722220689999999999853985340699997
Q gi|254780491|r    7 NQIVDSLKVLSIPGEKNNIVEMQRLSE---IFIVHNTVYLSITVPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLT   80 (101)
Q Consensus         7 ~~I~~~L~~v~dP~~~~~iv~~g~V~~---i~i~~~~v~i~l~l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt   80 (101)
                      -.++..|+.+.++......+..+++..   ..+-.+++.+.+.+-+......+.+.+.+++.++.+..-..+++.++
T Consensus        34 ~~~i~~l~~~~~~~~~~~~~~~~~~~~g~~~NvIp~~~~~~~d~R~~~~~~~~~~~~~i~~~~~~~~~~~g~~~ei~  110 (120)
T 3io1_A           34 AQAALGLHAIPPHSAGASRVNVGVXQAGTGRNVVPSSALLKVETRGESEAINQYVFERAQHVVAGAAAXYEARYELR  110 (120)
T ss_dssp             HHHHHHHHTCCCBTTBCEEEEEEEEEECSCTTSCCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred             HHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf             88765430012345532278999852543103067504899985477778887899987666554300123431689


No 10 
>>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} (A:)
Probab=62.05  E-value=6.3  Score=20.16  Aligned_cols=39  Identities=5%  Similarity=0.154  Sum_probs=26.6

Q ss_pred             CCEEEEEEE-ECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
Q ss_conf             987999999-672222068999999999985398534069999707
Q gi|254780491|r   38 HNTVYLSIT-VPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLTEN   82 (101)
Q Consensus        38 ~~~v~i~l~-l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt~~   82 (101)
                      |.++.|.+. +....|      ...++++|++++||.+++|.+..+
T Consensus         2 G~~~~l~V~gm~C~~C------~~~Ie~~l~~~~GV~~v~v~~~~~   41 (73)
T 1mwy_A            2 GTRYSWKVSGMDCAAC------ARKVENAVRQLAGVNQVQVLFATE   41 (73)
T ss_dssp             CEEEEEEEESCCSTTH------HHHHHHHHHTSSSEEEEEEETTTT
T ss_pred             CCEEEEEECCCCHHHH------HHHHHHHHHCCCCCEEEEEECCCC
T ss_conf             9889999899883889------999999986599947999989899


No 11 
>>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A (A:)
Probab=60.17  E-value=7.7  Score=19.67  Aligned_cols=37  Identities=16%  Similarity=0.195  Sum_probs=25.0

Q ss_pred             EEEEEECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
Q ss_conf             9999967222206899999999998539853406999970
Q gi|254780491|r   42 YLSITVPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLTE   81 (101)
Q Consensus        42 ~i~l~l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt~   81 (101)
                      .+.|.++.-.|..   =...++++|..+|||.++.|.+..
T Consensus         4 ~~~l~V~Gm~C~~---C~~~Ie~~l~~~~gV~~v~vn~~~   40 (90)
T 2g9o_A            4 TATFIIDGMHCKS---CVSNIESTLSALQYVSSIVVSLEN   40 (90)
T ss_dssp             EEEEEEESCCHHH---HHHHHHHHHTTCTTEEEEEEETTT
T ss_pred             EEEEEECCCCCHH---HHHHHHHHHHCCCCCEEEEEECCC
T ss_conf             6999989920478---799999997547870399999989


No 12 
>>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} (X:)
Probab=59.81  E-value=8.8  Score=19.35  Aligned_cols=37  Identities=19%  Similarity=0.261  Sum_probs=25.2

Q ss_pred             EEEEECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
Q ss_conf             9999672222068999999999985398534069999707
Q gi|254780491|r   43 LSITVPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLTEN   82 (101)
Q Consensus        43 i~l~l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt~~   82 (101)
                      +.|.++.-.|+   .=...++++|.++|||.++.|.+..+
T Consensus         4 ~~l~V~gm~C~---~C~~~Ie~~l~~~~GV~~~~v~~~~~   40 (74)
T 3dxs_X            4 IQVGVTGMTCA---ACSNSVEAALMNVNGVFKASVALLQN   40 (74)
T ss_dssp             EEEEEECCCSH---HHHHHHHHHHHTSTTEEEEEEEGGGT
T ss_pred             EEEEECCCCHH---HHHHHHHHHHHCCCCCEEEEEECCCC
T ss_conf             99998997649---99999999997299957999984499


No 13 
>>1yj7_A ESCJ; mixed alpha/beta, extended linker, protein transport; 1.80A {Escherichia coli} (A:69-171)
Probab=59.14  E-value=13  Score=18.41  Aligned_cols=33  Identities=24%  Similarity=0.339  Sum_probs=26.8

Q ss_pred             CHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC
Q ss_conf             206899999999998539853406999970789
Q gi|254780491|r   52 AHQLQSLRSNAQQIIQNIPTVKNAVVTLTENKN   84 (101)
Q Consensus        52 ~~~~~~l~~~i~~~l~~i~gv~~v~V~lt~~~~   84 (101)
                      ..+...+..++++.|+.++||.++.|.++.+.+
T Consensus        17 ~~~~~ale~eL~~ti~~i~gV~~ArV~i~~p~~   49 (103)
T 1yj7_A           17 AKINYLKEQDIERLLSKIPGVIDCSVSLNVNNN   49 (103)
T ss_dssp             HHHHHHHHHHHHHHHTTSTTEEEEEEEEEC---
T ss_pred             HHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCC
T ss_conf             999999999999999816781378999957887


No 14 
>>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} (A:1-72)
Probab=58.73  E-value=8.6  Score=19.40  Aligned_cols=41  Identities=15%  Similarity=0.242  Sum_probs=27.6

Q ss_pred             CEEEEEEEECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
Q ss_conf             87999999672222068999999999985398534069999707
Q gi|254780491|r   39 NTVYLSITVPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLTEN   82 (101)
Q Consensus        39 ~~v~i~l~l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt~~   82 (101)
                      +.-.+.+.++.-.|+.   =...++++|+++|||.++.|.+...
T Consensus         4 ~~~~~~l~V~gm~C~~---C~~~ie~~l~~~~GV~~v~v~~~~~   44 (72)
T 1p6t_A            4 EQKEIAMQVSGMTCAA---CAARIEKGLKRMPGVTDANVNLATE   44 (72)
T ss_dssp             CCEEEEEEEESCCSSH---HHHHHHHHHTTSSSEEEEEEEGGGT
T ss_pred             CCEEEEEEECCCCCHH---HHHHHHHHHHCCCCEEEEEEECCCC
T ss_conf             8608999989957689---9999999986599938999991169


No 15 
>>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A (B:)
Probab=58.50  E-value=9.8  Score=19.10  Aligned_cols=38  Identities=21%  Similarity=0.224  Sum_probs=26.5

Q ss_pred             EEEEEECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
Q ss_conf             99999672222068999999999985398534069999707
Q gi|254780491|r   42 YLSITVPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLTEN   82 (101)
Q Consensus        42 ~i~l~l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt~~   82 (101)
                      .+.+.++.-.|+.   =...++++|..+|||.+++|.+..+
T Consensus         3 ~~~l~V~gm~C~~---C~~~I~~~l~~~~GV~~v~v~~~~~   40 (75)
T 3cjk_B            3 SVTISVEGMTCNS---CVWTIEQQIGKVNGVHHIKVSLEEK   40 (75)
T ss_dssp             EEEEEECCCCSHH---HHHHHHHHHHTSTTEEEEEEETTTT
T ss_pred             EEEEEECCEECHH---HHHHHHHHHHCCCCCEEEEEECCCC
T ss_conf             9999989900189---9999999997499958999994799


No 16 
>>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} (A:)
Probab=57.50  E-value=9.3  Score=19.22  Aligned_cols=24  Identities=25%  Similarity=0.383  Sum_probs=19.8

Q ss_pred             HHHHHHHHHCCCCCCCEEEEEEEC
Q ss_conf             999999985398534069999707
Q gi|254780491|r   59 RSNAQQIIQNIPTVKNAVVTLTEN   82 (101)
Q Consensus        59 ~~~i~~~l~~i~gv~~v~V~lt~~   82 (101)
                      ...++++|+++|||.++.|.+..+
T Consensus        18 ~~~Ie~~l~~~~GV~~v~v~~~~~   41 (72)
T 1aw0_A           18 VQSIEGVISKKPGVKSIRVSLANS   41 (72)
T ss_dssp             HHHHHHHHHTSTTCCCEEEETTTT
T ss_pred             HHHHHHHHHCCCCCEEEEEECCCC
T ss_conf             999999872689967999988899


No 17 
>>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A (A:)
Probab=57.36  E-value=7.7  Score=19.68  Aligned_cols=24  Identities=17%  Similarity=0.319  Sum_probs=19.8

Q ss_pred             HHHHHHHHHCCCCCCCEEEEEEEC
Q ss_conf             999999985398534069999707
Q gi|254780491|r   59 RSNAQQIIQNIPTVKNAVVTLTEN   82 (101)
Q Consensus        59 ~~~i~~~l~~i~gv~~v~V~lt~~   82 (101)
                      ...++++|+++|||.+++|.+..+
T Consensus        18 ~~~v~~~l~~~~GV~~v~v~~~~~   41 (71)
T 2aj0_A           18 AAKFERNVKEIEGVTEAIVNFGAS   41 (71)
T ss_dssp             HHHHHHHHHHSTTEEEEEECCSSE
T ss_pred             HHHHHHHHCCCCCCEEEEEECCCC
T ss_conf             999999872379944999989899


No 18 
>>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} (A:)
Probab=56.89  E-value=8.6  Score=19.41  Aligned_cols=39  Identities=15%  Similarity=0.247  Sum_probs=25.7

Q ss_pred             EEEEEEECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
Q ss_conf             999999672222068999999999985398534069999707
Q gi|254780491|r   41 VYLSITVPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLTEN   82 (101)
Q Consensus        41 v~i~l~l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt~~   82 (101)
                      -.+.+.++.-.|..   =...++++|..+|||.++.|.+..+
T Consensus         6 ~~~~l~V~gm~C~~---C~~~ie~~l~~~~GV~~v~v~~~~~   44 (76)
T 1opz_A            6 KEIAMQVSGMTCAA---CAARIEKGLKRMPGVTDANVNLATE   44 (76)
T ss_dssp             EEEEEEEESCCSTT---HHHHHHHHHHTSTTEEEEEEEGGGT
T ss_pred             EEEEEEECCCCCHH---HHHHHHHHHHCCCCCEEEEEECCCC
T ss_conf             79999999934389---9999999997499957999987899


No 19 
>>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} (A:1-73)
Probab=56.46  E-value=4.6  Score=20.92  Aligned_cols=37  Identities=8%  Similarity=0.212  Sum_probs=25.9

Q ss_pred             EEEEEEEECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
Q ss_conf             7999999672222068999999999985398534069999707
Q gi|254780491|r   40 TVYLSITVPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLTEN   82 (101)
Q Consensus        40 ~v~i~l~l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt~~   82 (101)
                      ++.+.+.+.-..|      ...++++|.+++||.++.|.+...
T Consensus         7 ~~~l~vgm~C~~C------~~~Ie~~l~~~~GV~~v~V~~~~~   43 (73)
T 1qup_A            7 EATYAIPXHCENC------VNDIKACLKNVPGINSLNFDIEQQ   43 (73)
T ss_dssp             EEEEECCCCSTTH------HHHHHHHHTTCTTEEEEEEETTTT
T ss_pred             EEEEEEEEECHHH------HHHHHHHHHCCCCEEEEEEECCCC
T ss_conf             9999990582899------999999986699906999987899


No 20 
>>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} (A:77-149)
Probab=55.33  E-value=11  Score=18.86  Aligned_cols=38  Identities=13%  Similarity=0.174  Sum_probs=25.3

Q ss_pred             EEEEEECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
Q ss_conf             99999672222068999999999985398534069999707
Q gi|254780491|r   42 YLSITVPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLTEN   82 (101)
Q Consensus        42 ~i~l~l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt~~   82 (101)
                      .+.+.++.-.|..   =...++++|..+|||.++.+.+..+
T Consensus         5 ~~~l~V~gm~C~~---C~~~ie~~l~~l~GV~~v~vn~~~~   42 (73)
T 2ew9_A            5 NIELTITGMTCAS---CVHNIESKLTRTNGITYASVALATS   42 (73)
T ss_dssp             EEEEEEESCCSHH---HHHHHHHHHHHSSSCCEEEEETTTT
T ss_pred             EEEEECCCCCCCH---HHHHHHHHHHCCCCCEEEEECCCCC
T ss_conf             7876237887131---2689999996799908998216788


No 21 
>>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} (A:)
Probab=54.15  E-value=14  Score=18.17  Aligned_cols=42  Identities=19%  Similarity=0.164  Sum_probs=29.5

Q ss_pred             CCCEEEEEEEECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
Q ss_conf             698799999967222206899999999998539853406999970
Q gi|254780491|r   37 VHNTVYLSITVPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLTE   81 (101)
Q Consensus        37 ~~~~v~i~l~l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt~   81 (101)
                      ..+.-.+.|.++.-.|+.=   ...++++|..++||.++.|.+..
T Consensus         4 ~~~~~~~~l~V~gm~C~~C---~~~I~~~l~~~~GV~~~~v~~~~   45 (79)
T 1kvi_A            4 SMGVNSVTISVEGMTCNSC---VWTIEQQIGKVNGVHHIKVSLEE   45 (79)
T ss_dssp             TTTCEEEEEEECCCCSTTT---HHHHHHHHHHSSSCCCEEEEGGG
T ss_pred             CCCCEEEEEEECCEECHHH---HHHHHHHHHCCCCCEEEEEECCC
T ss_conf             8883599999899464899---99999998608996699999889


No 22 
>>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, metal transport; NMR {Helicobacter pylori 26695} (A:)
Probab=54.10  E-value=6.5  Score=20.09  Aligned_cols=37  Identities=14%  Similarity=0.233  Sum_probs=26.1

Q ss_pred             EEEEECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
Q ss_conf             9999672222068999999999985398534069999707
Q gi|254780491|r   43 LSITVPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLTEN   82 (101)
Q Consensus        43 i~l~l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt~~   82 (101)
                      ..+.++.-.|..   =...++++|+++|||.++.+.+..+
T Consensus         3 ~~l~V~gm~C~~---C~~~Ie~~l~~~~gV~~v~v~l~~~   39 (66)
T 1yg0_A            3 ATFQVPSITCNH---CVDKIEKFVGEIEGVSFIDVSVEKK   39 (66)
T ss_dssp             EEECCTTCSCSH---HHHHHHHHHTTSSSEEEEEEETTTT
T ss_pred             EEEEECCCCCHH---HHHHHHHHHHCCCCCEEEEEECCCC
T ss_conf             999989917589---9999999997189946999988899


No 23 
>>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} (A:105-202)
Probab=51.92  E-value=12  Score=18.51  Aligned_cols=43  Identities=14%  Similarity=0.150  Sum_probs=31.2

Q ss_pred             CCCEEEEEEEECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
Q ss_conf             6987999999672222068999999999985398534069999707
Q gi|254780491|r   37 VHNTVYLSITVPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLTEN   82 (101)
Q Consensus        37 ~~~~v~i~l~l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt~~   82 (101)
                      .++.-.+.|.++.-.|+.=   ...++++|+.++||.++.|.+..+
T Consensus        14 ~~~~~~~~l~V~gm~C~~C---~~~Ie~~l~~~~GV~~~~v~~~~~   56 (98)
T 2rop_A           14 QGTCSTTLIAIAGMTCASC---VHSIEGMISQLEGVQQISVSLAEG   56 (98)
T ss_dssp             --CCEEEEEEESCCCSTHH---HHHHHHHGGGSSSEEEEEEETTTT
T ss_pred             CCCCEEEEEECCCCCCHHH---HHHHHHHHHCCCCCEEEEEECCCC
T ss_conf             7764389996168766136---688988875389945999989899


No 24 
>>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} (A:)
Probab=49.82  E-value=7.1  Score=19.89  Aligned_cols=39  Identities=15%  Similarity=0.261  Sum_probs=26.4

Q ss_pred             EEEEEECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
Q ss_conf             999996722220689999999999853985340699997078
Q gi|254780491|r   42 YLSITVPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLTENK   83 (101)
Q Consensus        42 ~i~l~l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt~~~   83 (101)
                      .+.+.++.-.|+.   =...++++|+.+|||.++.|.+..++
T Consensus         4 ~~~l~V~gm~C~~---C~~~Ie~~l~~~~GV~~~~v~~~~~~   42 (72)
T 1osd_A            4 TVTLSVPGMTCSA---CPITVKKAISKVEGVSKVDVTFETRQ   42 (72)
T ss_dssp             EEEEECTTCCSTT---HHHHHHHHHHTSTTEEEEEEETTTTE
T ss_pred             EEEEEECCCCHHH---HHHHHHHHHHCCCCCEEEEEECCCCE
T ss_conf             8999989971089---99999999974999689999867999


No 25 
>>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana} (A:)
Probab=48.58  E-value=18  Score=17.66  Aligned_cols=46  Identities=13%  Similarity=0.032  Sum_probs=30.9

Q ss_pred             CCCCCEEEEEEEECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
Q ss_conf             3369879999996722220689999999999853985340699997078
Q gi|254780491|r   35 FIVHNTVYLSITVPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLTENK   83 (101)
Q Consensus        35 ~i~~~~v~i~l~l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt~~~   83 (101)
                      .-..+.-.+.|.++.-.|..=   ...++.+|..++||.++.|.+..++
T Consensus        10 ~~~~~~~~~~l~V~gm~C~~C---~~~Ie~~l~~~~GV~~v~v~~~~~~   55 (95)
T 2kkh_A           10 KKVKKLQKSYFDVLGICCTSE---VPIIENILKSLDGVKEYSVIVPSRT   55 (95)
T ss_dssp             CCSSCSEEEEEEETTCCTTTT---HHHHHHHHHHSSSEEEEEEETTTTE
T ss_pred             HHHHCEEEEEEEECCCCCHHH---HHHHHHHHHCCCCCEEEEEECCCCE
T ss_conf             431214899999898066889---9999999974998059998767998


No 26 
>>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A (A:)
Probab=47.75  E-value=9.4  Score=19.18  Aligned_cols=25  Identities=16%  Similarity=0.325  Sum_probs=20.6

Q ss_pred             HHHHHHHHHHCCCCCCCEEEEEEEC
Q ss_conf             9999999985398534069999707
Q gi|254780491|r   58 LRSNAQQIIQNIPTVKNAVVTLTEN   82 (101)
Q Consensus        58 l~~~i~~~l~~i~gv~~v~V~lt~~   82 (101)
                      =...++++|+.++|+.++.|.+...
T Consensus        14 C~~~ie~~l~~~~gV~~v~v~~~~~   38 (66)
T 2roe_A           14 CVMAVTKALKKVPGVEKVEVSLEKG   38 (66)
T ss_dssp             HHHHHHHHHHTSTTCCCEEECSSSC
T ss_pred             HHHHHHHHHHCCCCEEEEEEECCCC
T ss_conf             8999999986599928999986888


No 27 
>>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} (A:)
Probab=47.58  E-value=8.6  Score=19.42  Aligned_cols=37  Identities=14%  Similarity=0.252  Sum_probs=27.6

Q ss_pred             CEEEEEEEECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
Q ss_conf             8799999967222206899999999998539853406999970
Q gi|254780491|r   39 NTVYLSITVPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLTE   81 (101)
Q Consensus        39 ~~v~i~l~l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt~   81 (101)
                      ..+.+.+-++...|      ...++++|++++||.++.|.+..
T Consensus        19 ~~~~l~vgM~C~~C------~~~Ie~~l~~~~GV~~v~v~~~~   55 (98)
T 2crl_A           19 CTLEFAVQMTCQSC------VDAVRKSLQGVAGVQDVEVHLED   55 (98)
T ss_dssp             EEEEEEECCCSHHH------HHHHHHTTTTCTTCCEEEEETTT
T ss_pred             EEEEEEECCCCHHH------HHHHHHHHHCCCCCEEEEEECCC
T ss_conf             89999983298899------99999999668992389998889


No 28 
>>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} (A:)
Probab=44.77  E-value=25  Score=16.83  Aligned_cols=35  Identities=11%  Similarity=0.118  Sum_probs=23.5

Q ss_pred             EEEEECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEE
Q ss_conf             99996722220689999999999853985340699997
Q gi|254780491|r   43 LSITVPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLT   80 (101)
Q Consensus        43 i~l~l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt   80 (101)
                      +.+.++.-.|.   .=...++++|.+++||.++.|.+.
T Consensus         4 ~~l~V~gm~C~---~C~~~ie~~l~~~~GV~~v~v~~~   38 (69)
T 2qif_A            4 KTLQVEGMSCQ---HCVKAVETSVGELDGVSAVHVNLE   38 (69)
T ss_dssp             EEEEEECCCSH---HHHHHHHHHHHTSTTEEEEEEETT
T ss_pred             EEEEECCCCCH---HHHHHHHHHHHCCCCCEEEEEECC
T ss_conf             99999992368---999999999971999479999887


No 29 
>>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} (A:1-76)
Probab=44.03  E-value=11  Score=18.75  Aligned_cols=36  Identities=22%  Similarity=0.289  Sum_probs=24.7

Q ss_pred             EEEEEEE-ECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
Q ss_conf             7999999-67222206899999999998539853406999970
Q gi|254780491|r   40 TVYLSIT-VPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLTE   81 (101)
Q Consensus        40 ~v~i~l~-l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt~   81 (101)
                      ++.|.+. +..+.|      ...++++|+.++||.++.|.+..
T Consensus         5 ~~~l~v~gm~C~~C------~~~Ie~al~~~~GV~~v~v~~~~   41 (76)
T 2ew9_A            5 KCFLQIKGMTCASC------VSNIERNLQKEAGVLSVLVALMA   41 (76)
T ss_dssp             EEEEEEECCCSSSH------HHHHHHHHHTTSSCCCEEEETTT
T ss_pred             EEEEEECCCCCHHH------HHHHHHHHHCCCCHHHHEEHHCC
T ss_conf             99999899757889------99999999639984653000205


No 30 
>>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, protein folding, ATPase; 2.60A {Thermoplasma acidophilum} (A:147-213,A:367-401)
Probab=43.38  E-value=21  Score=17.18  Aligned_cols=65  Identities=12%  Similarity=0.163  Sum_probs=52.5

Q ss_pred             CHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCC-----EE--EEEEEECHHHCHHHHHHHHHHHHHHHCC
Q ss_conf             58999999841418799976232387010133698-----79--9999967222206899999999998539
Q gi|254780491|r    5 LKNQIVDSLKVLSIPGEKNNIVEMQRLSEIFIVHN-----TV--YLSITVPHTIAHQLQSLRSNAQQIIQNI   69 (101)
Q Consensus         5 ~~~~I~~~L~~v~dP~~~~~iv~~g~V~~i~i~~~-----~v--~i~l~l~~~~~~~~~~l~~~i~~~l~~i   69 (101)
                      .-+-+.+|...+.+++.++.-+++.+|+=..+.||     .+  .+++-+-+......+...+.+..||.-+
T Consensus        25 la~lvVdAv~~v~~~~~~~~~vDl~~I~I~K~~Ggsl~dS~LVka~ti~lrG~~~~~lde~eRsl~Dal~vv   96 (102)
T 1a6d_A           25 LADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDTQFIKAVSILIRGGTDHVVSEVERALNDAIRVV   96 (102)
T ss_dssp             HHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTCEEESCEEEEECCSSSTTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHH
T ss_conf             999998640121112577520233236999970771452147564599993650889999988888788878


No 31 
>>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, protein folding, ATPase; 2.60A {Thermoplasma acidophilum} (B:147-215,B:368-402)
Probab=42.95  E-value=16  Score=17.90  Aligned_cols=65  Identities=11%  Similarity=0.165  Sum_probs=50.6

Q ss_pred             CHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCE-----E---EEEEEECHHHCHHHHHHHHHHHHHHHCC
Q ss_conf             589999998414187999762323870101336987-----9---9999967222206899999999998539
Q gi|254780491|r    5 LKNQIVDSLKVLSIPGEKNNIVEMQRLSEIFIVHNT-----V---YLSITVPHTIAHQLQSLRSNAQQIIQNI   69 (101)
Q Consensus         5 ~~~~I~~~L~~v~dP~~~~~iv~~g~V~~i~i~~~~-----v---~i~l~l~~~~~~~~~~l~~~i~~~l~~i   69 (101)
                      .-+-+.+|...+.+++.++.-+++.+|+=..+.||.     +   .+++-+-++.....+.+.+.+..+|.-+
T Consensus        26 la~lvVdAv~~V~~~~~~~~~vDl~~I~I~K~~Ggs~~dS~LV~~a~ti~lRG~~~~~ldE~eRsl~Dal~vv   98 (104)
T 1a6d_B           26 LAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDTQLINKAVSILVRGETEHVVDEMERSITDSLHVV   98 (104)
T ss_dssp             HHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGCEEESSCEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCCCCEEECCCEEEEEECCCCEEECEEECEEEEEEECCCCHHHHHHHHHHHHHHHHHH
T ss_conf             7778888775420013555245304089999738702205243326999946875668987763467899999


No 32 
>>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} (A:)
Probab=42.36  E-value=13  Score=18.41  Aligned_cols=40  Identities=23%  Similarity=0.262  Sum_probs=27.8

Q ss_pred             CCEEEEEEEECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEE
Q ss_conf             9879999996722220689999999999853985340699997
Q gi|254780491|r   38 HNTVYLSITVPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLT   80 (101)
Q Consensus        38 ~~~v~i~l~l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt   80 (101)
                      ++...+.|.++.-.|+.=   ...++++|..++||.+++|.+.
T Consensus         6 ~~~~~~~l~V~gm~C~~C---~~~Ie~~l~~~~GV~~v~v~~~   45 (84)
T 1q8l_A            6 AGEVVLKMKVEGMTCHSC---TSTIEGKIGKLQGVQRIKVSLD   45 (84)
T ss_dssp             SSCEEEEEEECCTTTCSS---CHHHHHHHHTCTTEEEEEECST
T ss_pred             CCCEEEEEEECCEECHHH---HHHHHHHHHCCCCCEEEEEECC
T ss_conf             886799999799286899---9999999865799569999988


No 33 
>>1sb6_A Copper chaperone scatx1; structure, NEW metal binding motif, structural proteomics in europe, spine, structural genomics; NMR {Synechocystis SP} (A:)
Probab=42.28  E-value=7.4  Score=19.78  Aligned_cols=24  Identities=21%  Similarity=0.210  Sum_probs=19.5

Q ss_pred             HHHHHHHHHCCCCCCCEEEEEEEC
Q ss_conf             999999985398534069999707
Q gi|254780491|r   59 RSNAQQIIQNIPTVKNAVVTLTEN   82 (101)
Q Consensus        59 ~~~i~~~l~~i~gv~~v~V~lt~~   82 (101)
                      ...++++|+++||+.++.|.+..+
T Consensus        16 ~~~I~~~l~~~~GV~~v~v~~~~~   39 (64)
T 1sb6_A           16 AEAVTKAVQNEDAQATVQVDLTSK   39 (64)
T ss_dssp             THHHHHHHHHHCTTCEEEEETTTT
T ss_pred             HHHHHHHHHCCCCEEEEECCCCCC
T ss_conf             899999996499937987146876


No 34 
>>1cpz_A Protein (COPZ); copper chaperone, metal transport; NMR {Enterococcus hirae} (A:)
Probab=41.06  E-value=12  Score=18.67  Aligned_cols=35  Identities=17%  Similarity=0.235  Sum_probs=23.7

Q ss_pred             EEEECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
Q ss_conf             99967222206899999999998539853406999970
Q gi|254780491|r   44 SITVPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLTE   81 (101)
Q Consensus        44 ~l~l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt~   81 (101)
                      .+.++.-.|+.   =...++++|..+|||.++++.+..
T Consensus         3 ~l~V~gm~C~~---C~~~Ie~~l~~~~GV~~v~v~~~~   37 (68)
T 1cpz_A            3 EFSVKGMSCNH---CVARIEEAVGRISGVKKVKVQLKK   37 (68)
T ss_dssp             EEEESCCCSSS---HHHHHHHHHHTSTTEEEEEEETTT
T ss_pred             EEEECCEECHH---HHHHHHHHHHCCCCCEEEEEECCC
T ss_conf             88989863389---999999887569993799998679


No 35 
>>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination; 1.02A {Saccharomyces cerevisiae} (A:)
Probab=40.69  E-value=12  Score=18.57  Aligned_cols=37  Identities=8%  Similarity=0.282  Sum_probs=25.6

Q ss_pred             EEEEEEEECHHHCHHHHHHHHHHHHHHHCC-CCCCCEEEEEEEC
Q ss_conf             799999967222206899999999998539-8534069999707
Q gi|254780491|r   40 TVYLSITVPHTIAHQLQSLRSNAQQIIQNI-PTVKNAVVTLTEN   82 (101)
Q Consensus        40 ~v~i~l~l~~~~~~~~~~l~~~i~~~l~~i-~gv~~v~V~lt~~   82 (101)
                      .+.|...+.-..|      .+.++++|+++ +|+.++.|.+..+
T Consensus         6 ~~~~~vgM~C~~C------~~~Ie~al~~l~~GV~~v~v~l~~~   43 (73)
T 1cc8_A            6 HYQFNVVMTCSGC------SGAVNKVLTKLEPDVSKIDISLEKQ   43 (73)
T ss_dssp             EEEEEECCCSHHH------HHHHHHHHHTTTTSEEEEEEETTTT
T ss_pred             EEEEEECCCCHHH------HHHHHHHHHCCCCCEEEEEEECCCC
T ss_conf             9999983093898------9999999964767338999988998


No 36 
>>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for structural proteomics; NMR {Agrobacterium tumefaciens str} (A:)
Probab=39.47  E-value=16  Score=17.89  Aligned_cols=43  Identities=9%  Similarity=-0.039  Sum_probs=29.6

Q ss_pred             CCCEEEEEEEECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
Q ss_conf             6987999999672222068999999999985398534069999707
Q gi|254780491|r   37 VHNTVYLSITVPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLTEN   82 (101)
Q Consensus        37 ~~~~v~i~l~l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt~~   82 (101)
                      ..+.-...|.++.-.|.   .=...++.+|+.++||.++.|.+..+
T Consensus        18 ~~~~~~~~l~V~gm~C~---~C~~~Ie~~l~~~~GV~~v~v~~~~~   60 (85)
T 2k2p_A           18 YFQGAGLSFHVEDMTCG---HCAGVIKGAIEKTVPGAAVHADPASR   60 (85)
T ss_dssp             ----CEEEEECTTCCHH---HHHHHHHHHHHHHSTTCEEEEETTTT
T ss_pred             HCCCCEEEEEECCCCCH---HHHHHHHHHHHCCCCCEEEEEECCCC
T ss_conf             33688699997990968---99999999997499924999877899


No 37 
>>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} (B:1-76)
Probab=39.35  E-value=13  Score=18.49  Aligned_cols=36  Identities=8%  Similarity=0.226  Sum_probs=25.9

Q ss_pred             EEEEEEEECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
Q ss_conf             799999967222206899999999998539853406999970
Q gi|254780491|r   40 TVYLSITVPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLTE   81 (101)
Q Consensus        40 ~v~i~l~l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt~   81 (101)
                      ++.+.+.+.-..|.      ..++++|.+++||.++.+.+..
T Consensus         8 ~~~~~vgm~C~~C~------~~Ie~~l~~~~GV~~v~v~~~~   43 (76)
T 1jk9_B            8 EATYAIPMHCENCV------NDIKACLKNVPGINSLNFDIEQ   43 (76)
T ss_dssp             EEEEECCCCSSSHH------HHHHHHHTTCTTEEEEEEETTT
T ss_pred             EEEEEECEECHHHH------HHHHHHHHCCCCCEEEEEECCC
T ss_conf             89999860968999------9999998659991699998889


No 38 
>>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} (A:73-151)
Probab=39.23  E-value=16  Score=17.92  Aligned_cols=36  Identities=14%  Similarity=0.160  Sum_probs=25.0

Q ss_pred             EEEEEECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEE
Q ss_conf             999996722220689999999999853985340699997
Q gi|254780491|r   42 YLSITVPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLT   80 (101)
Q Consensus        42 ~i~l~l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt   80 (101)
                      .+.|.++.-.|+.=   ...++++|+.++||.++.|.+.
T Consensus         3 ~~~l~V~gm~C~~C---~~~Ie~~l~~~~GV~~v~v~~~   38 (79)
T 1p6t_A            3 KAEFDIEGMTCAAC---ANRIEKRLNKIEGVANAPVNFA   38 (79)
T ss_dssp             EEEEEESSCCSSSH---HHHHHHHHTTSSSEEECCEETT
T ss_pred             EEEEEECCCCCHHH---HHHHHHHHHCCCCEEEEEEECC
T ss_conf             45784068875789---9999987412798589999767


No 39 
>>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} (A:1-104)
Probab=38.55  E-value=22  Score=17.16  Aligned_cols=40  Identities=18%  Similarity=0.193  Sum_probs=27.7

Q ss_pred             EEEEEEEECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
Q ss_conf             7999999672222068999999999985398534069999707
Q gi|254780491|r   40 TVYLSITVPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLTEN   82 (101)
Q Consensus        40 ~v~i~l~l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt~~   82 (101)
                      .-.+.|.++.-.|..=   ...++++|..++||.++.|.+..+
T Consensus        19 ~~~~~l~V~Gm~C~~C---~~~ie~~l~~~~gV~~v~v~~~~~   58 (104)
T 2rop_A           19 VVTLQLRIDGMHCKSC---VLNIEENIGQLLGVQSIQVSLENK   58 (104)
T ss_dssp             -CEEEEEEESGGGSTH---HHHHHHHTTSBTTEEEEEEETTTT
T ss_pred             EEEEEEEECCEECHHH---HHHHHHHHHCCCCCEEEEEECCCC
T ss_conf             2899999899025899---999999974599907999975699


No 40 
>>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} (A:)
Probab=37.21  E-value=15  Score=18.08  Aligned_cols=36  Identities=14%  Similarity=0.154  Sum_probs=24.1

Q ss_pred             EEEEECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
Q ss_conf             999967222206899999999998539853406999970
Q gi|254780491|r   43 LSITVPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLTE   81 (101)
Q Consensus        43 i~l~l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt~   81 (101)
                      +.+.++.-.|..   =...++++|+.+|||.+++|.+..
T Consensus         5 ~~l~V~gm~C~~---C~~~Ie~~l~~~~GV~~~~v~~~~   40 (80)
T 1jww_A            5 AEFDIEGMTCAA---CANRIEKRLNKIEGVANAPVNFAL   40 (80)
T ss_dssp             EEEEEESCCCHH---HHHHHHHHHHTSTTEEECCCCSSS
T ss_pred             EEEEECCCCHHH---HHHHHHHHHHCCCCCEEEEEECCC
T ss_conf             999989976388---899999999639994799998779


No 41 
>>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} (A:)
Probab=36.20  E-value=24  Score=16.91  Aligned_cols=35  Identities=9%  Similarity=0.159  Sum_probs=24.0

Q ss_pred             EEEEECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEE
Q ss_conf             99996722220689999999999853985340699997
Q gi|254780491|r   43 LSITVPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLT   80 (101)
Q Consensus        43 i~l~l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt   80 (101)
                      +.+.++.-.|+.   =...++++|+.++||.++.|.+.
T Consensus         4 ~~l~V~gm~C~~---C~~~Ie~~l~~~~GV~~v~v~~~   38 (72)
T 1fvq_A            4 VILAVHGMTCSA---CTNTINTQLRALKGVTKCDISLV   38 (72)
T ss_dssp             EEEEECSCCSHH---HHHHHHHHHHTSSSEEEECCBTT
T ss_pred             EEEEECCCCCHH---HHHHHHHHHHCCCCCEEEEEECC
T ss_conf             999979961589---99999999975999469999888


No 42 
>>2gcf_A Cation-transporting ATPase PACS; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, structural genomics, structural proteomics in europe; NMR {Synechocystis SP} (A:)
Probab=36.06  E-value=11  Score=18.89  Aligned_cols=35  Identities=17%  Similarity=0.334  Sum_probs=23.6

Q ss_pred             EEEEEE-ECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
Q ss_conf             999999-67222206899999999998539853406999970
Q gi|254780491|r   41 VYLSIT-VPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLTE   81 (101)
Q Consensus        41 v~i~l~-l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt~   81 (101)
                      +.|.+. +..+.|.      ..++++|+.+|||.++.|.+..
T Consensus         5 ~~~~V~gm~C~~C~------~~Ie~~l~~~~gV~~v~v~~~~   40 (73)
T 2gcf_A            5 INLQLEGMRCAACA------SSIERAIAKVPGVQSCQVNFAL   40 (73)
T ss_dssp             EEEEEESCCSSTTT------HHHHHHHTTSTTEEEEEECTTT
T ss_pred             EEEEECCCCCHHHH------HHHHHHHHCCCCCEEEEEECCC
T ss_conf             99997893458999------9999998638994799998889


No 43 
>>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A (A:)
Probab=34.65  E-value=16  Score=17.87  Aligned_cols=23  Identities=9%  Similarity=0.073  Sum_probs=19.1

Q ss_pred             HHHHHHHHHCCCCCCCEEEEEEE
Q ss_conf             99999998539853406999970
Q gi|254780491|r   59 RSNAQQIIQNIPTVKNAVVTLTE   81 (101)
Q Consensus        59 ~~~i~~~l~~i~gv~~v~V~lt~   81 (101)
                      ...++++|+.++||.++.+.+..
T Consensus        19 ~~~ie~~l~~~~GV~~v~v~~~~   41 (75)
T 1yjr_A           19 VHKIESSLTKHRGILYCSVALAT   41 (75)
T ss_dssp             HHHHHHHHTTSTTEEEEEEETTT
T ss_pred             HHHHHHHHHCCCCCEEEEEECCC
T ss_conf             99999998528995699998779


No 44 
>>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A (A:)
Probab=34.30  E-value=18  Score=17.62  Aligned_cols=37  Identities=14%  Similarity=0.100  Sum_probs=25.5

Q ss_pred             EEEEEECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
Q ss_conf             9999967222206899999999998539853406999970
Q gi|254780491|r   42 YLSITVPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLTE   81 (101)
Q Consensus        42 ~i~l~l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt~   81 (101)
                      .+.+.++.-.|..-   ...++++|+.+|||.+++|.+..
T Consensus         4 ~~~~~V~gm~C~~C---~~~Ie~~l~~~~GV~~v~v~~~~   40 (77)
T 1y3j_A            4 KCYIQVTGMTCASC---VANIERNLRREEGIYSILVALMA   40 (77)
T ss_dssp             EEEEEESCGGGCSH---HHHHHHHHTTSSSEEECCCBTTT
T ss_pred             EEEEEECCCCCHHH---HHHHHHHHHHCCCCEEEEEECCC
T ss_conf             69999899106899---99999999728994799998889


No 45 
>>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} (A:149-217,A:369-404)
Probab=29.49  E-value=36  Score=15.89  Aligned_cols=65  Identities=9%  Similarity=0.185  Sum_probs=49.4

Q ss_pred             CHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCE-----E----EEEEEECHHHCHHHHHHHHHHHHHHHCC
Q ss_conf             589999998414187999762323870101336987-----9----9999967222206899999999998539
Q gi|254780491|r    5 LKNQIVDSLKVLSIPGEKNNIVEMQRLSEIFIVHNT-----V----YLSITVPHTIAHQLQSLRSNAQQIIQNI   69 (101)
Q Consensus         5 ~~~~I~~~L~~v~dP~~~~~iv~~g~V~~i~i~~~~-----v----~i~l~l~~~~~~~~~~l~~~i~~~l~~i   69 (101)
                      .-+-+.+|...+.+.+.++.-+++.+|+=..+.||.     +    .+++-+-++.....+++++.++.+|..+
T Consensus        26 la~lvvdAv~~v~~~~~~~~~vDl~~I~I~K~~Ggs~~dS~lV~~ka~TiilRG~~~~~ldE~eRsi~Dal~vv   99 (105)
T 1q3q_A           26 LAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRPKAVTILIRGGTEHVIDEVERALEDAVKVV   99 (105)
T ss_dssp             HHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGCEEESCSSEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCCCEEECCCCEEEEECCCCCCEEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHH
T ss_conf             99999999751134567740220220599843787501004423884899989997788999999999999999


No 46 
>>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural genomics, PSI, protein structure initiative; 2.40A {Bacillus subtilis} (A:196-323)
Probab=24.67  E-value=54  Score=14.90  Aligned_cols=73  Identities=15%  Similarity=0.200  Sum_probs=47.9

Q ss_pred             HHHHHHHHCCCC---CCCCCHHHCCCC---CCCCCCCCEEEEEEEECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEE
Q ss_conf             999998414187---999762323870---1013369879999996722220689999999999853985340699997
Q gi|254780491|r    8 QIVDSLKVLSIP---GEKNNIVEMQRL---SEIFIVHNTVYLSITVPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLT   80 (101)
Q Consensus         8 ~I~~~L~~v~dP---~~~~~iv~~g~V---~~i~i~~~~v~i~l~l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt   80 (101)
                      .++..|..+.+.   ..+...+..+.+   ....+-.+++.+.+.+-+......+.+...+++.+..+..-..+++.+.
T Consensus        37 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~NvvP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  115 (128)
T 1ysj_A           37 QIISGLQSVVSRNISSLQNAVVSITRVQAGTSWNVIPDQAEXEGTVRTFQKEARQAVPEHXRRVAEGIAAGYGAQAEFK  115 (128)
T ss_dssp             HHHHHHC-----------CCEEEEEEEEECSCSSSCCSEEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred             HHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             9999998631013233553002059996797453732420468760233167778888899887524533323343111


No 47 
>>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} (A:109-149)
Probab=24.23  E-value=49  Score=15.15  Aligned_cols=32  Identities=13%  Similarity=0.225  Sum_probs=26.3

Q ss_pred             CCCCCEEEEEEEECHHHCHHHHHHHHHHHHHH
Q ss_conf             33698799999967222206899999999998
Q gi|254780491|r   35 FIVHNTVYLSITVPHTIAHQLQSLRSNAQQII   66 (101)
Q Consensus        35 ~i~~~~v~i~l~l~~~~~~~~~~l~~~i~~~l   66 (101)
                      .+..|.+.+.+............+++++++.+
T Consensus         8 vv~rg~l~IaIST~G~sP~lak~iR~~ie~~l   39 (41)
T 1pjq_A            8 IIDRSPLMVAVSXGGTSPVLARLLREKLESLL   39 (41)
T ss_dssp             EEEETTEEEEEECTTSCHHHHHHHHHHHHHHS
T ss_pred             EEECCCEEEEEECCCCCCHHHHHHHHHHHHHC
T ss_conf             99728859986159988188999999998756


No 48 
>>2j8s_A ACRB, acriflavine resistance protein B; membrane protein/complex, designed ankyrin repeat protein, multidrug resistance protein; HET: LMT LMU; 2.54A {Escherichia coli} PDB: 2dhh_A 1iwg_A 2dr6_A* 2drd_A* 2hqf_A 2hqg_A 2hqd_A 2hqc_A 2i6w_A 1oy6_A* 1oy9_A* 1oyd_A* 1oy8_A* 1oye_A 2rdd_A* 2w1b_A* 3d9b_A 1t9x_A* 1t9t_A* 1t9v_A* ... (A:135-181,A:275-329,A:568-673)
Probab=23.00  E-value=59  Score=14.71  Aligned_cols=45  Identities=7%  Similarity=0.024  Sum_probs=31.4

Q ss_pred             CCCEEEEEEEECHHH-CHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
Q ss_conf             698799999967222-206899999999998539853406999970
Q gi|254780491|r   37 VHNTVYLSITVPHTI-AHQLQSLRSNAQQIIQNIPTVKNAVVTLTE   81 (101)
Q Consensus        37 ~~~~v~i~l~l~~~~-~~~~~~l~~~i~~~l~~i~gv~~v~V~lt~   81 (101)
                      +.|.+.+.+++|.-. ....++..+++++.|.+.+++..+......
T Consensus       103 D~g~i~v~v~~P~Gtsle~T~~~~~~ie~~l~~~~~v~~~~~~~G~  148 (208)
T 2j8s_A          103 DQGVFMTMVQLPAGATQERTQKVLNEVTHYYLTKEKNNVESVFAVN  148 (208)
T ss_dssp             CCSEEEEEEECCTTCCHHHHHHHHHHHHHHHHHTTTTTEEEEEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEE
T ss_conf             0567777755433013999999999999987402688605899740


No 49 
>>2d5w_A Peptide ABC transporter, peptide-binding protein; protein-peptide complex, peptide binding protein; 1.30A {Thermus thermophilus HB8} (A:63-152)
Probab=22.60  E-value=60  Score=14.67  Aligned_cols=50  Identities=10%  Similarity=-0.037  Sum_probs=40.3

Q ss_pred             CCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCC-CEEEEEEEECHHHC
Q ss_conf             035899999984141879997623238701013369-87999999672222
Q gi|254780491|r    3 QILKNQIVDSLKVLSIPGEKNNIVEMQRLSEIFIVH-NTVYLSITVPHTIA   52 (101)
Q Consensus         3 ~~~~~~I~~~L~~v~dP~~~~~iv~~g~V~~i~i~~-~~v~i~l~l~~~~~   52 (101)
                      .++-+++...+..+.+++...--..++.+.++++.+ ..+.|.+.-|++..
T Consensus        36 p~ta~Dv~~s~~~~~~~~~~~~~~~~~~i~~i~~~d~~tv~i~l~~p~~~~   86 (90)
T 2d5w_A           36 PITTEDVAFYFEVGKAKGMPVLNPDFWERVNVRIKDARNFTLIFEPAYYYD   86 (90)
T ss_dssp             BCCHHHHHHHHHHHHSTTCCCSCHHHHHHEEEEECSSSEEEEEESSCCTTT
T ss_pred             CCCHHHHHHHHHHHHCCCCCCCCCCCHHCEEEEEECCCEEEEEECCCCCCH
T ss_conf             957999999999985679874551310004799841763899955765310


No 50 
>>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A (A:165-286)
Probab=21.32  E-value=64  Score=14.52  Aligned_cols=56  Identities=5%  Similarity=0.014  Sum_probs=43.0

Q ss_pred             HHCCCCC---CCCCCCCEEEEEEEECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
Q ss_conf             3238701---0133698799999967222206899999999998539853406999970
Q gi|254780491|r   26 VEMQRLS---EIFIVHNTVYLSITVPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLTE   81 (101)
Q Consensus        26 v~~g~V~---~i~i~~~~v~i~l~l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt~   81 (101)
                      +..|.+.   ...+-.+.+.+.+.+-++.....+.+.+++++.++....-..+.+.+.+
T Consensus        62 ~~~~~i~gg~~~N~Ip~~~~~~~d~R~~~~~~~~~~~~~i~~~~~~~a~~~~~~~~~~~  120 (122)
T 2f7v_A           62 FNIGRVDGGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAGFADPAAAHFEETFRGPS  120 (122)
T ss_dssp             EEEEEEEECSSTTSCCSEEEEEEEEECCTTCCHHHHHHHHHHTCSSCCSEEEEEEEECC
T ss_pred             ECCEEEECCEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCC
T ss_conf             01203532210122365010110235788568999999999987765300564203577


No 51 
>>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, structural genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X (X:)
Probab=20.39  E-value=13  Score=18.39  Aligned_cols=31  Identities=16%  Similarity=0.230  Sum_probs=22.4

Q ss_pred             ECHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
Q ss_conf             6722220689999999999853985340699997078
Q gi|254780491|r   47 VPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLTENK   83 (101)
Q Consensus        47 l~~~~~~~~~~l~~~i~~~l~~i~gv~~v~V~lt~~~   83 (101)
                      ++...|..      .++.+|++++||.+++|.+...+
T Consensus        12 m~C~~C~~------~Ie~~L~~~~GV~~~~vn~~~~~   42 (111)
T 2ofg_X           12 MDCTSCKL------KIEGSLERLKGVAEASVTVATGR   42 (111)
T ss_dssp             EEESCCCG------GGTHHHHHHHHTTSSSEEEEEEE
T ss_pred             EEECCCCC------HHHHHHHHHHHHCCCCEEEEEEE
T ss_conf             99899035------89999999886236742589998


Done!