HHsearch results for GI: 254780491 and protein with PDBid: 1th5_A

>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=94.69  E-value=0.019  Score=33.45  Aligned_cols=71  Identities=14%  Similarity=0.200  Sum_probs=54.0

Q ss_pred             CCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCEEEEEEEECHHHCHHHHHHHHHHHHHHHC-CCCCCCEEE
Q ss_conf             96035899999984141879997623238701013369879999996722220689999999999853-985340699
Q gi|254780491|r    1 MNQILKNQIVDSLKVLSIPGEKNNIVEMQRLSEIFIVHNTVYLSITVPHTIAHQLQSLRSNAQQIIQN-IPTVKNAVV   77 (101)
Q Consensus         1 Ms~~~~~~I~~~L~~v~dP~~~~~iv~~g~V~~i~i~~~~v~i~l~l~~~~~~~~~~l~~~i~~~l~~-i~gv~~v~V   77 (101)
                      |-+++++.|..+|..++-+-...|   -|-|+=+.++++.|.+.+.=....|.   .++..+++.|+. +|++..|++
T Consensus         1 m~elt~e~V~~vL~eirP~L~a~d---GGdvelv~i~~~~V~v~l~GaC~gC~---Tl~~~Ie~~L~~~iPei~~V~~   72 (74)
T 1th5_A            1 MLELNEENVEKVLNEIRPYLAGTG---GGGLQFLMIKGPIVKVRLTGPAAVVR---TVRIAVSKKLREKIPSIQIVQL   72 (74)
T ss_dssp             CCCCSHHHHHHHHTTTHHHHTTTT---CCCCCCCEEETTEEEECCCSSSSSSS---SHHHHHHHHHHHHCTTCSEEEE
T ss_pred             CCCCCHHHHHHHHHHHCCCHHHCC---CCEEEEEEEECCEEEEEECCCCCCCH---HHHHHHHHHHHHHCCCCCEEEE
T ss_conf             976589999999998552231158---97199999609999999737877626---6999999999997998408995