HHSEARCH alignment of GI: 254780491 and SCOP domain: d1th5a1

Alignment

Probab=90.75  E-value=0.082  Score=28.57  Aligned_cols=68  Identities=15%  Similarity=0.259  Sum_probs=50.6

Q ss_pred             CCCHHHHHHHHHHCCCCCCC-CCHHHCCCCCCCCCCCCEEEEEEEECHHHCHHHHHHHHHHHHHHH-CCCCCCCEEE
Q ss_conf             03589999998414187999-762323870101336987999999672222068999999999985-3985340699
Q gi|254780491|r    3 QILKNQIVDSLKVLSIPGEK-NNIVEMQRLSEIFIVHNTVYLSITVPHTIAHQLQSLRSNAQQIIQ-NIPTVKNAVV   77 (101)
Q Consensus         3 ~~~~~~I~~~L~~v~dP~~~-~~iv~~g~V~~i~i~~~~v~i~l~l~~~~~~~~~~l~~~i~~~l~-~i~gv~~v~V   77 (101)
                      +++++.|..+|..++ |.+. .|   -|-|+=+.++++.+.+.+.=....|+   .++..+++.|+ .+|++..|++
T Consensus         2 el~ee~V~~vL~eir-P~l~a~d---GGdvelv~i~~~~v~v~l~GaC~gC~---Tl~~gIe~~L~~~iPei~~V~~   71 (73)
T d1th5a1           2 ELNEENVEKVLNEIR-PYLAGTG---GGGLQFLMIKGPIVKVRLTGPAAVVR---TVRIAVSKKLREKIPSIQIVQL   71 (73)
T ss_dssp             CCSHHHHHHHHTTTH-HHHTTTT---CCCCCCCEEETTEEEECCCSSSSSSS---SHHHHHHHHHHHHCTTCSEEEE
T ss_pred             CCCHHHHHHHHHHHC-CCCCCCC---CCEEEEEEECCCEEEEEECCCCCCCC---HHHHHHHHHHHHHCCCCCEEEE
T ss_conf             988999999999855-2032068---93399999509999999569876510---3999999999997898658994

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: Fe-S cluster assembly (FSCA) domain-like
family: NifU C-terminal domain-like
domain: NifU-like protein 1, NIFUL1
species: Rice (Oryza sativa) [TaxId: 4530]