HHsearch alignment for GI: 254780493 and conserved domain: cd00476

>cd00476 SAICAR_synt 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase. SAICAR synthetase (the PurC gene product) catalyzes the seventh step of the de novo biosynthesis of purine nucleotides (also reported as eighth step). It converts 5-aminoimidazole-4-carboxyribonucleotide (CAIR), ATP, and L-aspartate into 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR), ADP, and phosphate.
Probab=100.00  E-value=0  Score=498.04  Aligned_cols=228  Identities=26%  Similarity=0.389  Sum_probs=208.8

Q ss_pred             EEEECCEEEEEECCCCCEEEEEECCEEEECCCCC-CCCCHHHHHHHHHHHHHHHHHHH-CCCCEECCCCCCCCEEEECCC
Q ss_conf             0230440265875999489998188125557657-77878899999999999985410-233121357763000000254
Q gi|254780493|r   14 NYYSGKVRENYFLSDGTRITIATDRLSAFDQNIA-CIPYKGEVLNQITQYWFHHTSDI-CSNHTLDYPDPNVLVGQQLQM   91 (323)
Q Consensus        14 liy~GKvk~vY~~~d~~ll~v~tDriSAfD~~~~-~Ip~KG~~l~~iS~~~F~~l~~~-i~tH~i~~~~~~~~~v~k~~~   91 (323)
T Consensus         1 ~lY~GK~K~vy~~~~~~ll~~~~DriSafD~~~~~~i~gKG~~~~~iS~~~F~~l~~~GI~tH~i~~~~~~~~~vkk~~~   80 (230)
T cd00476           1 TLYRGKTKIVYETKDGVLLLEFKDDISAGDGARRNFLDEKGDITAKLTLFIFKYLSEAGIPTHFVERLGPRTLLVDKLKX   80 (230)
T ss_pred             CCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEEECCE
T ss_conf             95302352789769998999997985142763678899878999999999999862169973564369994799998876


Q ss_pred             CCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCH
Q ss_conf             65057885212244322001221024765134466321222356887402232103333457775555456665304998
Q gi|254780493|r   92 FPIELIVRGYLAGNTKTSLLTFYKNGKRKIYEYLLPDNMSDNQKLPYPVITPTTKSSESASGCDQPISPNEIIHRGILTR  171 (323)
Q Consensus        92 iPiE~VvR~y~~GS~~~~~~~~~k~~~~~~~g~~lp~gl~~~~~l~~Pi~tpstK~~~~~~~~D~~i~~~~~~~~~~~~~  171 (323)
T Consensus        81 iplEvVvR~ya~GS~~rry~-----------------g~~eg~~l~~Pi~e~~~K~d~---~~Dp~i~~~~~~~~~~~~~  140 (230)
T cd00476          81 IPLEVVVRNRATGSFVKRYG-----------------GFKEGREFPPPLVEFFYKDDA---EHDPIVSEDQLERLGFIGK  140 (230)
T ss_pred             EEEEEEEEEEECCCHHHHCC-----------------CCCCCCCCCCCEEEEEECCCC---CCCCCCCHHHHHHHCCCCH
T ss_conf             45799997112020576617-----------------875776189866787733787---8999889999998568999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCEEEECCCCCCCCCHHHCCCHHHHHHHCCCCCCCCCHHH
Q ss_conf             99989999999999999999886797887423244550886257620004810000000000012331254444323788
Q gi|254780493|r  172 NQWETISSYALSLFERGCKLALENGLILVDSKYEFGIDKKQNIILADEIHTPDSSRYWEVETYEKSFREGITPIGLDKDF  251 (323)
Q Consensus       172 ~~~~~i~~~sl~i~~~~~~~~~~~GliLvD~K~EFG~~~~g~iiL~DEv~TPDssR~W~~~~ye~~~~~g~~~~s~DKq~  251 (323)
T Consensus       141 ~e~~~i~~~al~v~~~l~~~~~~~Gl~LVD~K~EFG~~~~G~ivL~DEi-sPDs~R~Wd~~~~-----------~~~kd~  208 (230)
T cd00476         141 VDVERXKELAVKINTVLKKLFSPAGLELWDFKLEFGLDEEGEIVLGDEI-SPDSSRLWRKGGE-----------PYDKDL  208 (230)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCEEEEEEE-CCCCCCCCCCCCC-----------CCCCHH
T ss_conf             9999999999999999999999789989998899878799989999970-8986433228986-----------000103


Q ss_pred             HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             876553112236799999898999999999999999860
Q gi|254780493|r  252 IRNWILTRCNPYRDNIPDIPENIILRTSQTYIAAYEKIT  290 (323)
Q Consensus       252 ~R~wl~~~~~~~~~~~P~LP~~vv~~~~~~Y~~~~e~lT  290 (323)
T Consensus       209 ~r~~-----------------~~l~~~~~~Y~ev~~rl~  230 (230)
T cd00476         209 FRRR-----------------ASLGQIIEKYEEVAELVR  230 (230)
T ss_pred             HHHC-----------------CCCHHHHHHHHHHHHHHC
T ss_conf             4302-----------------651769999999999759