HHsearch alignment for GI: 254780493 and conserved domain: cd00476
>cd00476 SAICAR_synt 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase. SAICAR synthetase (the PurC gene product) catalyzes the seventh step of the de novo biosynthesis of purine nucleotides (also reported as eighth step). It converts 5-aminoimidazole-4-carboxyribonucleotide (CAIR), ATP, and L-aspartate into 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR), ADP, and phosphate.
Probab=100.00 E-value=0 Score=498.04 Aligned_cols=228 Identities=26% Similarity=0.389 Sum_probs=208.8
Q ss_pred EEEECCEEEEEECCCCCEEEEEECCEEEECCCCC-CCCCHHHHHHHHHHHHHHHHHHH-CCCCEECCCCCCCCEEEECCC
Q ss_conf 0230440265875999489998188125557657-77878899999999999985410-233121357763000000254
Q gi|254780493|r 14 NYYSGKVRENYFLSDGTRITIATDRLSAFDQNIA-CIPYKGEVLNQITQYWFHHTSDI-CSNHTLDYPDPNVLVGQQLQM 91 (323)
Q Consensus 14 liy~GKvk~vY~~~d~~ll~v~tDriSAfD~~~~-~Ip~KG~~l~~iS~~~F~~l~~~-i~tH~i~~~~~~~~~v~k~~~ 91 (323)
T Consensus 1 ~lY~GK~K~vy~~~~~~ll~~~~DriSafD~~~~~~i~gKG~~~~~iS~~~F~~l~~~GI~tH~i~~~~~~~~~vkk~~~ 80 (230)
T cd00476 1 TLYRGKTKIVYETKDGVLLLEFKDDISAGDGARRNFLDEKGDITAKLTLFIFKYLSEAGIPTHFVERLGPRTLLVDKLKX 80 (230)
T ss_pred CCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEEECCE
T ss_conf 95302352789769998999997985142763678899878999999999999862169973564369994799998876
Q ss_pred CCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCH
Q ss_conf 65057885212244322001221024765134466321222356887402232103333457775555456665304998
Q gi|254780493|r 92 FPIELIVRGYLAGNTKTSLLTFYKNGKRKIYEYLLPDNMSDNQKLPYPVITPTTKSSESASGCDQPISPNEIIHRGILTR 171 (323)
Q Consensus 92 iPiE~VvR~y~~GS~~~~~~~~~k~~~~~~~g~~lp~gl~~~~~l~~Pi~tpstK~~~~~~~~D~~i~~~~~~~~~~~~~ 171 (323)
T Consensus 81 iplEvVvR~ya~GS~~rry~-----------------g~~eg~~l~~Pi~e~~~K~d~---~~Dp~i~~~~~~~~~~~~~ 140 (230)
T cd00476 81 IPLEVVVRNRATGSFVKRYG-----------------GFKEGREFPPPLVEFFYKDDA---EHDPIVSEDQLERLGFIGK 140 (230)
T ss_pred EEEEEEEEEEECCCHHHHCC-----------------CCCCCCCCCCCEEEEEECCCC---CCCCCCCHHHHHHHCCCCH
T ss_conf 45799997112020576617-----------------875776189866787733787---8999889999998568999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCEEEECCCCCCCCCHHHCCCHHHHHHHCCCCCCCCCHHH
Q ss_conf 99989999999999999999886797887423244550886257620004810000000000012331254444323788
Q gi|254780493|r 172 NQWETISSYALSLFERGCKLALENGLILVDSKYEFGIDKKQNIILADEIHTPDSSRYWEVETYEKSFREGITPIGLDKDF 251 (323)
Q Consensus 172 ~~~~~i~~~sl~i~~~~~~~~~~~GliLvD~K~EFG~~~~g~iiL~DEv~TPDssR~W~~~~ye~~~~~g~~~~s~DKq~ 251 (323)
T Consensus 141 ~e~~~i~~~al~v~~~l~~~~~~~Gl~LVD~K~EFG~~~~G~ivL~DEi-sPDs~R~Wd~~~~-----------~~~kd~ 208 (230)
T cd00476 141 VDVERXKELAVKINTVLKKLFSPAGLELWDFKLEFGLDEEGEIVLGDEI-SPDSSRLWRKGGE-----------PYDKDL 208 (230)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCEEEEEEE-CCCCCCCCCCCCC-----------CCCCHH
T ss_conf 9999999999999999999999789989998899878799989999970-8986433228986-----------000103
Q ss_pred HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 876553112236799999898999999999999999860
Q gi|254780493|r 252 IRNWILTRCNPYRDNIPDIPENIILRTSQTYIAAYEKIT 290 (323)
Q Consensus 252 ~R~wl~~~~~~~~~~~P~LP~~vv~~~~~~Y~~~~e~lT 290 (323)
T Consensus 209 ~r~~-----------------~~l~~~~~~Y~ev~~rl~ 230 (230)
T cd00476 209 FRRR-----------------ASLGQIIEKYEEVAELVR 230 (230)
T ss_pred HHHC-----------------CCCHHHHHHHHHHHHHHC
T ss_conf 4302-----------------651769999999999759