Query gi|254780493|ref|YP_003064906.1| phosphoribosylaminoimidazole-succinocarboxamide synthase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 323
No_of_seqs 170 out of 1571
Neff 6.2
Searched_HMMs 33803
Date Wed Jun 1 17:08:02 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780493.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >2cnq_A Phosphoribosylaminoimi 100.0 0 0 316.3 9.8 162 3-295 1-164 (165)
2 >2gqr_A Phosphoribosylaminoimi 100.0 1.4E-45 0 310.6 11.2 149 91-291 1-149 (152)
3 >3kre_A Phosphoribosylaminoimi 100.0 2.8E-45 0 308.5 9.8 133 89-253 1-136 (136)
4 >2z02_A Phosphoribosylaminoimi 100.0 8.4E-45 0 305.2 10.7 131 91-253 1-131 (131)
5 >2ywv_A Phosphoribosylaminoimi 100.0 4.5E-44 0 300.4 10.0 131 91-253 1-131 (131)
6 >2cnq_A Phosphoribosylaminoimi 100.0 1.4E-44 0 303.6 4.0 138 91-237 1-139 (140)
7 >2h31_A Multifunctional protei 100.0 2.2E-42 0 289.6 7.4 143 88-254 1-144 (145)
8 >1kut_A Phosphoribosylaminoimi 100.0 4.7E-41 1.4E-45 281.2 9.7 121 91-233 1-121 (121)
9 >2z02_A Phosphoribosylaminoimi 99.9 4.6E-26 1.4E-30 185.6 6.5 88 5-92 4-93 (111)
10 >3kre_A Phosphoribosylaminoimi 99.9 1.1E-25 3.2E-30 183.2 8.0 89 3-91 16-107 (127)
11 >2ywv_A Phosphoribosylaminoimi 99.9 1.4E-25 4.1E-30 182.6 7.0 85 7-91 2-89 (113)
12 >2gqr_A Phosphoribosylaminoimi 99.9 1.1E-24 3.2E-29 176.8 8.0 81 10-90 2-85 (85)
13 >1kut_A Phosphoribosylaminoimi 99.9 5.3E-24 1.6E-28 172.5 6.8 82 15-97 2-85 (109)
14 >2h31_A Multifunctional protei 99.9 1.8E-23 5.4E-28 169.0 5.9 82 7-88 5-90 (146)
15 >2h31_A Multifunctional protei 91.7 0.17 4.9E-06 29.1 3.3 77 128-218 24-100 (145)
16 >1vbg_A Pyruvate,orthophosphat 33.0 30 0.0009 14.7 4.3 48 246-293 35-83 (83)
17 >2pzi_A Probable serine/threon 25.3 41 0.0012 13.9 9.9 123 168-319 46-173 (208)
18 >1jdw_A L-arginine\:glycine am 25.2 22 0.00065 15.6 0.5 29 266-294 4-32 (33)
19 >3cxj_A Uncharacterized protei 25.0 29 0.00085 14.8 1.1 16 158-173 61-76 (165)
20 >2dyi_A Probable 16S rRNA-proc 22.6 46 0.0014 13.5 2.1 29 16-44 18-46 (75)
21 >3gni_B Strad alpha; kinase fo 20.0 52 0.0015 13.2 5.9 40 276-315 111-150 (282)
No 1
>>2cnq_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; ligase, phosphoribosylaminoimidazolesuccinocarboxamide (saicar) SYN ligase; HET: ADP AMZ AMP; 1.00A {Saccharomyces cerevisiae} (A:1-112,A:253-305)
Probab=100.00 E-value=0 Score=316.31 Aligned_cols=162 Identities=28% Similarity=0.470 Sum_probs=144.3
Q ss_pred CCCCCCCCC-CCEEEECCEEEEEECCCCCEEEEEECCEEEECCCCC-CCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCC
Q ss_conf 300054889-960230440265875999489998188125557657-778788999999999999854102331213577
Q gi|254780493|r 3 ILSKAYIPE-LPNYYSGKVRENYFLSDGTRITIATDRLSAFDQNIA-CIPYKGEVLNQITQYWFHHTSDICSNHTLDYPD 80 (323)
Q Consensus 3 ~l~~~~~~~-l~liy~GKvk~vY~~~d~~ll~v~tDriSAfD~~~~-~Ip~KG~~l~~iS~~~F~~l~~~i~tH~i~~~~ 80 (323)
+|++++||+ ++++|+||||+||+++++.+||+|||||||||++++ .|||||++||+||+|||++|+++|+|||++.++
T Consensus 1 ~l~~t~l~~~~~li~~GKvKdvY~~~~~~lllv~tDriSAfD~v~~~~Ip~KG~vl~~iS~~wF~~L~~gI~tH~i~~~~ 80 (165)
T 2cnq_A 1 SITKTELDGILPLVARGKVRDIYEVDAGTLLFVATDRISAYDVIMENSIPEKGILLTKLSEFWFKFLSNDVRNHLVDIAP 80 (165)
T ss_dssp -CCCSCCCTTSSCEEEECSSEEEEEEETTEEEEEECSCCEETTEECSSCCTTHHHHHHHHHHHHHHHTTTTSEESBCCCC
T ss_pred CCCEEECCCCCCCCEECCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCC
T ss_conf 96333126777851001576168970899699998488505464157889976899999999999986545766511368
Q ss_pred CCCCEEEECCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCH
Q ss_conf 63000000254650578852122443220012210247651344663212223568874022321033334577755554
Q gi|254780493|r 81 PNVLVGQQLQMFPIELIVRGYLAGNTKTSLLTFYKNGKRKIYEYLLPDNMSDNQKLPYPVITPTTKSSESASGCDQPISP 160 (323)
Q Consensus 81 ~~~~~v~k~~~iPiE~VvR~y~~GS~~~~~~~~~k~~~~~~~g~~lp~gl~~~~~l~~Pi~tpstK~~~~~~~~D~~i~~ 160 (323)
++.|++++|+++|+|++.|....+|.
T Consensus 81 ~~~~~~~k~~~~~~~~~~~~~~gRs~------------------------------------------------------ 106 (165)
T 2cnq_A 81 GKTIFDYLPAKLSEPKYKTQLEDRSL------------------------------------------------------ 106 (165)
T ss_dssp TTCCGGGGSCGGGGSHHHHHHHTTSE------------------------------------------------------
T ss_pred CCHHHHHCCCCCCCCCCHHHCCCCCE------------------------------------------------------
T ss_conf 84001001321124631121158842------------------------------------------------------
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCEEEECCCCCCCCCHHHCCCHHHHHHHC
Q ss_conf 56665304998999899999999999999998867978874232445508862576200048100000000000123312
Q gi|254780493|r 161 NEIIHRGILTRNQWETISSYALSLFERGCKLALENGLILVDSKYEFGIDKKQNIILADEIHTPDSSRYWEVETYEKSFRE 240 (323)
Q Consensus 161 ~~~~~~~~~~~~~~~~i~~~sl~i~~~~~~~~~~~GliLvD~K~EFG~~~~g~iiL~DEv~TPDssR~W~~~~ye~~~~~ 240 (323)
+.= .
T Consensus 107 -------------------------------------------------------~vk---------------------k 110 (165)
T 2cnq_A 107 -------------------------------------------------------LVH---------------------K 110 (165)
T ss_dssp -------------------------------------------------------EEE---------------------E
T ss_pred -------------------------------------------------------EEE---------------------E
T ss_conf -------------------------------------------------------799---------------------8
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 5444432378887655311223679999989899999999999999986088664
Q gi|254780493|r 241 GITPIGLDKDFIRNWILTRCNPYRDNIPDIPENIILRTSQTYIAAYEKITGLKFI 295 (323)
Q Consensus 241 g~~~~s~DKq~~R~wl~~~~~~~~~~~P~LP~~vv~~~~~~Y~~~~e~lTG~~f~ 295 (323)
-.+|+||||||+||||.+++|++.++| +||+|||..|++||+++||+|||++|+
T Consensus 111 ~~~q~s~dKq~vRdwl~~~~~~~~~~p-~lp~~iv~~t~~~Y~e~~e~ltG~~~~ 164 (165)
T 2cnq_A 111 HKSQDSYDKQFLRDWLTANKLNGVNGV-KMPQDIVDRTRAKYIEAYETLTGSKWS 164 (165)
T ss_dssp CCSCCCCSSTHHHHHHHHHTTCTTCTT-CCCCHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred ECCCCCCCCHHHHHHHHHHCCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 508754524599998998668678988-889999999999999999999867767
No 2
>>2gqr_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; PURC, ADE2, ADE1, nucleotide complex, octahedral magnesium coordination; HET: ADP; 2.00A {Escherichia coli} PDB: 2gqs_A* (A:86-237)
Probab=100.00 E-value=1.4e-45 Score=310.57 Aligned_cols=149 Identities=28% Similarity=0.399 Sum_probs=139.5
Q ss_pred CCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf 46505788521224432200122102476513446632122235688740223210333345777555545666530499
Q gi|254780493|r 91 MFPIELIVRGYLAGNTKTSLLTFYKNGKRKIYEYLLPDNMSDNQKLPYPVITPTTKSSESASGCDQPISPNEIIHRGILT 170 (323)
Q Consensus 91 ~iPiE~VvR~y~~GS~~~~~~~~~k~~~~~~~g~~lp~gl~~~~~l~~Pi~tpstK~~~~~~~~D~~i~~~~~~~~~~~~ 170 (323)
.||||||||||+|||++++| |+.+|++||+|+|||+||+|+ .|||+|+.+++.++++++
T Consensus 1 ~IPlEvVvRn~a~GS~~kry------------------gl~eg~~l~~Pive~~~K~d~---~~Dp~i~~~~~~~~~~~~ 59 (152)
T 2gqr_A 1 XVPVECVVRNRAAGSLVKRL------------------GIEEGIELNPPLFDLFLKNDA---XHDPXVNESYCETFGWVS 59 (152)
T ss_dssp ECSEEEEEEEECCHHHHHHH------------------CCCTTCEEEEEEEEEEECCGG---GTCCEECHHHHHHTTSSC
T ss_pred CCCEEEEEHHHHHCCCCCCC------------------CCCCCCCCCCCCCCCCCCCCC---CCCCCCCHHHHHHHCCCH
T ss_conf 21179997434130204256------------------864223446443322122344---688764588999846210
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCEEEECCCCCCCCCHHHCCCHHHHHHHCCCCCCCCCHH
Q ss_conf 89998999999999999999988679788742324455088625762000481000000000001233125444432378
Q gi|254780493|r 171 RNQWETISSYALSLFERGCKLALENGLILVDSKYEFGIDKKQNIILADEIHTPDSSRYWEVETYEKSFREGITPIGLDKD 250 (323)
Q Consensus 171 ~~~~~~i~~~sl~i~~~~~~~~~~~GliLvD~K~EFG~~~~g~iiL~DEv~TPDssR~W~~~~ye~~~~~g~~~~s~DKq 250 (323)
+++++.|++.|+++|..++++|+++||+|||||+|||++ +|+|+|+||| ||||||||++++|+ ++|||
T Consensus 60 ~~e~~~i~~~al~v~~~l~~~~~~~gi~LvD~KlEFG~~-~g~i~L~DEI-tpDs~Rlw~~~~~e----------~lDKe 127 (152)
T 2gqr_A 60 KENLARXKELTYKANDVLKKLFDDAGLILVDFKLEFGLY-KGEVVLGDEF-SPDGSRLWDKETLE----------KXDKD 127 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEEEE-TTEEEEESCC-STTSEEEEETTTCC----------BCSTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEC-CCCEEEEEEE-CCCCCCCCCCCCCC----------CCCHH
T ss_conf 345888988888888998888986795886416899745-9978999945-79864240677677----------45869
Q ss_pred HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 88765531122367999998989999999999999998608
Q gi|254780493|r 251 FIRNWILTRCNPYRDNIPDIPENIILRTSQTYIAAYEKITG 291 (323)
Q Consensus 251 ~~R~wl~~~~~~~~~~~P~LP~~vv~~~~~~Y~~~~e~lTG 291 (323)
++|+|+. .+.+.|.++++||--
T Consensus 128 ~~R~~l~-------------------~~~~~Y~ev~~rl~~ 149 (152)
T 2gqr_A 128 RFRQSLG-------------------GLIEAYEAVARRLGV 149 (152)
T ss_dssp HHHTTCC-------------------CHHHHHHHHHHHHTC
T ss_pred HHHHHHH-------------------HHHHHHHHHHHHHCC
T ss_conf 9872123-------------------366999999998488
No 3
>>3kre_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ATP-binding, ligase; 1.80A {Ehrlichia chaffeensis str} (A:105-240)
Probab=100.00 E-value=2.8e-45 Score=308.47 Aligned_cols=133 Identities=34% Similarity=0.544 Sum_probs=127.4
Q ss_pred CCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHC
Q ss_conf 25465057885212244322001221024765134466321222356887402232103333457775555456665304
Q gi|254780493|r 89 LQMFPIELIVRGYLAGNTKTSLLTFYKNGKRKIYEYLLPDNMSDNQKLPYPVITPTTKSSESASGCDQPISPNEIIHRGI 168 (323)
Q Consensus 89 ~~~iPiE~VvR~y~~GS~~~~~~~~~k~~~~~~~g~~lp~gl~~~~~l~~Pi~tpstK~~~~~~~~D~~i~~~~~~~~~~ 168 (323)
|+|||||||||||+|||+|++| |+.++++||+|++||+||+++ .|||+||++++.++|+
T Consensus 1 ~~~iPiEvIvR~~a~GS~~rr~------------------g~~eg~~l~~Pive~~~K~d~---~~Dp~i~~~~~~~~~~ 59 (136)
T 3kre_A 1 ITIIPIEVVIRNLAAGNFSKRF------------------QIADGTPFKSPIIEFYYKNDE---LSDPMVSEGHILSFQW 59 (136)
T ss_dssp EEECSEEEEEEEECCHHHHHHH------------------TCCTTCEEEEEEEEEEECCTT---TTCCEECHHHHHHTTS
T ss_pred CCCCCEEEEEEEEECHHHHHHH------------------HCCCCCCCCCCCCCCCCCCCC---CCCCCCCHHHHHHHHH
T ss_conf 3678818999989817655140------------------304563047887765223556---7545555778988500
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEE---CCCCCEEEECCCCCCCCCHHHCCCHHHHHHHCCCCCC
Q ss_conf 9989998999999999999999988679788742324455---0886257620004810000000000012331254444
Q gi|254780493|r 169 LTRNQWETISSYALSLFERGCKLALENGLILVDSKYEFGI---DKKQNIILADEIHTPDSSRYWEVETYEKSFREGITPI 245 (323)
Q Consensus 169 ~~~~~~~~i~~~sl~i~~~~~~~~~~~GliLvD~K~EFG~---~~~g~iiL~DEv~TPDssR~W~~~~ye~~~~~g~~~~ 245 (323)
+++++++.|+++|+++|+.+++++.++||+|||||+|||+ +.+|+|+|+||| ||||||||++++|+
T Consensus 60 ~~~~e~~~i~~~a~~i~~~l~~~~~~~gl~LvD~K~EFG~~~dd~~g~iiL~DEI-tPDs~R~w~~~~~e---------- 128 (136)
T 3kre_A 60 LTNQELEKIKILSLKINNILSELFFNVGIKLVDFKLEFGKLHNDEQSDLFLADEI-SPDTCRLWDISTNK---------- 128 (136)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEECEEEETTCTTCCCEECSCC-STTTEEEEETTTCC----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCEEEEEEEE-CCCCCCCCCCCCCC----------
T ss_conf 1378898999999999999999998739488711146743126988869999953-79853132788887----------
Q ss_pred CCCHHHHH
Q ss_conf 32378887
Q gi|254780493|r 246 GLDKDFIR 253 (323)
Q Consensus 246 s~DKq~~R 253 (323)
++|||++|
T Consensus 129 ~ldKe~~R 136 (136)
T 3kre_A 129 RLDKDRYR 136 (136)
T ss_dssp BCSTHHHH
T ss_pred CCCHHHHH
T ss_conf 56748876
No 4
>>2z02_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; 2-layer sandwich, ligase, purine biosynthesis, structural genomics; HET: ATP CIT; 2.03A {Methanocaldococcus jannaschii} PDB: 2yzl_A* (A:92-222)
Probab=100.00 E-value=8.4e-45 Score=305.21 Aligned_cols=131 Identities=37% Similarity=0.583 Sum_probs=126.3
Q ss_pred CCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf 46505788521224432200122102476513446632122235688740223210333345777555545666530499
Q gi|254780493|r 91 MFPIELIVRGYLAGNTKTSLLTFYKNGKRKIYEYLLPDNMSDNQKLPYPVITPTTKSSESASGCDQPISPNEIIHRGILT 170 (323)
Q Consensus 91 ~iPiE~VvR~y~~GS~~~~~~~~~k~~~~~~~g~~lp~gl~~~~~l~~Pi~tpstK~~~~~~~~D~~i~~~~~~~~~~~~ 170 (323)
|||||||||||+|||++++| |+.+|++||+|++||+||+++ .|||+|+.+++.+.|+++
T Consensus 1 miPlEvIvR~~a~GS~~kry------------------g~~eg~~l~~Pive~~~K~d~---~~Dp~i~~~~~~~~~~~~ 59 (131)
T 2z02_A 1 IIPIEVIVRNIAAGSLCRRY------------------PFEEGKELPFPIVQFDYKNDE---YGDPMLNEDIAVALGLAT 59 (131)
T ss_dssp ECSEEEEEEEECCTHHHHHS------------------SCCTTCEEEEEEEEEEECCGG---GTCCBCCHHHHHHTTSSC
T ss_pred EEEEEEEEEEEECHHHHHHH------------------HHHHCCCCCCCCCCCCCCCHH---CCCCCHHHHHHHHHHCCC
T ss_conf 62479999768714443110------------------111045478532244554010---376311457899971077
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCEEEECCCCCCCCCHHHCCCHHHHHHHCCCCCCCCCHH
Q ss_conf 89998999999999999999988679788742324455088625762000481000000000001233125444432378
Q gi|254780493|r 171 RNQWETISSYALSLFERGCKLALENGLILVDSKYEFGIDKKQNIILADEIHTPDSSRYWEVETYEKSFREGITPIGLDKD 250 (323)
Q Consensus 171 ~~~~~~i~~~sl~i~~~~~~~~~~~GliLvD~K~EFG~~~~g~iiL~DEv~TPDssR~W~~~~ye~~~~~g~~~~s~DKq 250 (323)
++++++|+++++++|..++++++++|++|||||+|||++.+|+|+|+||| ||||||||++++|+ ++|||
T Consensus 60 ~~e~~~i~~~~~~i~~~l~~~~~~~gl~LvD~K~EFG~~~~g~ivL~DEi-tpDs~R~wd~~~~~----------~ldK~ 128 (131)
T 2z02_A 60 REELNKIKEIALKVNEVLKKLFDEKGIILVDFKIEIGKDREGNLLVADEI-SPDTMRLWDKETRD----------VLDKD 128 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEECEEEETTCCEEECSCC-STTTEEEEETTTCC----------BCSTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCEEEEECC-CCCCCCCCCCCCCC----------CCCHH
T ss_conf 88999999999999999999998579678640258733589868999834-79753323588763----------23728
Q ss_pred HHH
Q ss_conf 887
Q gi|254780493|r 251 FIR 253 (323)
Q Consensus 251 ~~R 253 (323)
++|
T Consensus 129 ~~R 131 (131)
T 2z02_A 129 VFR 131 (131)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 888
No 5
>>2ywv_A Phosphoribosylaminoimidazole succinocarboxamide synthetase; ADP complex, structural genomics, NPPSFA; HET: ADP; 1.75A {Geobacillus kaustophilus} (A:89-219)
Probab=100.00 E-value=4.5e-44 Score=300.43 Aligned_cols=131 Identities=29% Similarity=0.462 Sum_probs=125.8
Q ss_pred CCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf 46505788521224432200122102476513446632122235688740223210333345777555545666530499
Q gi|254780493|r 91 MFPIELIVRGYLAGNTKTSLLTFYKNGKRKIYEYLLPDNMSDNQKLPYPVITPTTKSSESASGCDQPISPNEIIHRGILT 170 (323)
Q Consensus 91 ~iPiE~VvR~y~~GS~~~~~~~~~k~~~~~~~g~~lp~gl~~~~~l~~Pi~tpstK~~~~~~~~D~~i~~~~~~~~~~~~ 170 (323)
|||||||||||+|||+|++| |+.++++|++|++||++|+++ .|||+|+++++.+.|+++
T Consensus 1 miPiE~IvR~~~~GS~~rry------------------~~~eg~~~~~Pi~e~~~K~d~---~~D~~i~~~~~~~~~~~~ 59 (131)
T 2ywv_A 1 IIPLEVVVRNVVAGSLAKRI------------------GLEEGTPLEAPLVEFYYKNDD---LGDPLLLEDHIFILKLAS 59 (131)
T ss_dssp ECSEEEEEEEEECHHHHHHH------------------TCCTTEEEEEEEEEEEECCGG---GTCCEECHHHHHHHTSSC
T ss_pred CCCEEEEEEEEEECCCCCCC------------------CCCCCCCCCCCCCCCCCCCCC---CCCCCCCHHHHHHHHHHH
T ss_conf 55479999999843641037------------------887886789875665315622---365434214677751035
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCEEEECCCCCCCCCHHHCCCHHHHHHHCCCCCCCCCHH
Q ss_conf 89998999999999999999988679788742324455088625762000481000000000001233125444432378
Q gi|254780493|r 171 RNQWETISSYALSLFERGCKLALENGLILVDSKYEFGIDKKQNIILADEIHTPDSSRYWEVETYEKSFREGITPIGLDKD 250 (323)
Q Consensus 171 ~~~~~~i~~~sl~i~~~~~~~~~~~GliLvD~K~EFG~~~~g~iiL~DEv~TPDssR~W~~~~ye~~~~~g~~~~s~DKq 250 (323)
++++++|+++++++|..++++|+++|++|||||||||++.+|+|+|+||| ||||||||++++|+ ++|||
T Consensus 60 ~~e~~~i~~~~l~i~~~l~~~~~~~Gl~LvD~K~EFG~d~~g~iiL~DEi-tpDs~R~w~~~~~~----------~ldKe 128 (131)
T 2ywv_A 60 REEVAALKQAALAVNDVLRLHFAERNVRLIDFKLEFGRTADGAILLADEI-SPDTCRLWDAKTNE----------KLDKD 128 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEECEEECTTSCEEECSCC-STTTEEEEETTTCC----------BCSTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEC-CCCCCCCCCCCCCC----------CCCHH
T ss_conf 87653357777778899999998779841111359737689938999942-89864445089864----------33859
Q ss_pred HHH
Q ss_conf 887
Q gi|254780493|r 251 FIR 253 (323)
Q Consensus 251 ~~R 253 (323)
++|
T Consensus 129 ~~R 131 (131)
T 2ywv_A 129 VFR 131 (131)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 997
No 6
>>2cnq_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; ligase, phosphoribosylaminoimidazolesuccinocarboxamide (saicar) SYN ligase; HET: ADP AMZ AMP; 1.00A {Saccharomyces cerevisiae} (A:113-252)
Probab=100.00 E-value=1.4e-44 Score=303.60 Aligned_cols=138 Identities=30% Similarity=0.616 Sum_probs=129.3
Q ss_pred CCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf 46505788521224432200122102476513446632122235688740223210333345777555545666530499
Q gi|254780493|r 91 MFPIELIVRGYLAGNTKTSLLTFYKNGKRKIYEYLLPDNMSDNQKLPYPVITPTTKSSESASGCDQPISPNEIIHRGILT 170 (323)
Q Consensus 91 ~iPiE~VvR~y~~GS~~~~~~~~~k~~~~~~~g~~lp~gl~~~~~l~~Pi~tpstK~~~~~~~~D~~i~~~~~~~~~~~~ 170 (323)
|||||||||||+|||+|++|. ..+++||+++|+|+.++++||+|+|||+||++. +|+.++.+++.++++++
T Consensus 1 miPlE~IvR~y~~GS~~~ry~-----~~~~~~g~~l~~g~~eg~~l~~pi~e~~~K~d~----~D~~i~~~~~~~~~~~~ 71 (140)
T 2cnq_A 1 LIPLEVIVRGYITGSAWKEYV-----KTGTVHGLKQPQGLKESQEFPEPIFTPSTKAEQ----GEHDENISPAQAAELVG 71 (140)
T ss_dssp EECSSBEEEEEECCHHHHHHH-----HHHSEETTEECCTTCCTTCEEEEEEECCBCCCC-------CCCBCCHHHHHHHH
T ss_pred CCCEEEEEEECCEECCCEEEC-----CCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCHHHHHHHHHHHHHC
T ss_conf 201048999555411212212-----458615276688774224457743467421210----01014456578898752
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECC-CCCEEEECCCCCCCCCHHHCCCHHHHH
Q ss_conf 8999899999999999999998867978874232445508-862576200048100000000000123
Q gi|254780493|r 171 RNQWETISSYALSLFERGCKLALENGLILVDSKYEFGIDK-KQNIILADEIHTPDSSRYWEVETYEKS 237 (323)
Q Consensus 171 ~~~~~~i~~~sl~i~~~~~~~~~~~GliLvD~K~EFG~~~-~g~iiL~DEv~TPDssR~W~~~~ye~~ 237 (323)
++++++|+++++++|+.++++|+++||+|||||+|||++. +|+|+|+|||+||||||||++++|+++
T Consensus 72 ~~e~~~i~~~~~~i~~~l~~~~~~~Gl~LvD~K~EFG~~~~~g~ivL~DEi~tpDs~R~w~~~~~~~~ 139 (140)
T 2cnq_A 72 EDLSRRVAELAVKLYSKCKDYAKEKGIIIADTKFEFGIDEKTNEIILVDEVLTPDSSRFWNGASYKVG 139 (140)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEEEETTTTEEEEESCCSCTTTEEEEETTTCCT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCC
T ss_conf 58999999999999999999998746905763268988613656404632321686432013533347
No 7
>>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens} (A:90-234)
Probab=100.00 E-value=2.2e-42 Score=289.64 Aligned_cols=143 Identities=22% Similarity=0.161 Sum_probs=128.6
Q ss_pred ECCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHH
Q ss_conf 02546505788521224432200122102476513446632122235688740223210333345777555545666530
Q gi|254780493|r 88 QLQMFPIELIVRGYLAGNTKTSLLTFYKNGKRKIYEYLLPDNMSDNQKLPYPVITPTTKSSESASGCDQPISPNEIIHRG 167 (323)
Q Consensus 88 k~~~iPiE~VvR~y~~GS~~~~~~~~~k~~~~~~~g~~lp~gl~~~~~l~~Pi~tpstK~~~~~~~~D~~i~~~~~~~~~ 167 (323)
||+|||||||||||+|||+|++|. +..+|..+|+++.+.+.+++|+++|++|.+ ||.+++.+++ .+
T Consensus 1 k~~~iPlEvVvR~~a~GS~~kry~-------~~~~G~~l~~~l~e~~~k~d~~~dP~~k~e-----~~~~~~~a~~--~~ 66 (145)
T 2h31_A 1 QCEXIPIEWVCRRIATGSFLKRNP-------GVKEGYKFYPPKVELFFKDDANNDPQWSEE-----QLIAAKFCFA--GL 66 (145)
T ss_dssp CEEECSCEEEEESBCCHHHHHHST-------TCCTTCBCSSCCEEEESCCCSSCCCCBCHH-----HHHTTTCEET--TE
T ss_pred ECCCCCEEEEECCEECCEEEECCC-------CCCCCCCCCCCCCCCCCCCCCCCCCCCCHH-----HHHHHHHHHH--HH
T ss_conf 214212599970243232454156-------763677588421211124456789540112-----1456666777--50
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCC-CCEEEECCCCCCCCCHHHCCCHHHHHHHCCCCCCC
Q ss_conf 49989998999999999999999988679788742324455088-62576200048100000000000123312544443
Q gi|254780493|r 168 ILTRNQWETISSYALSLFERGCKLALENGLILVDSKYEFGIDKK-QNIILADEIHTPDSSRYWEVETYEKSFREGITPIG 246 (323)
Q Consensus 168 ~~~~~~~~~i~~~sl~i~~~~~~~~~~~GliLvD~K~EFG~~~~-g~iiL~DEv~TPDssR~W~~~~ye~~~~~g~~~~s 246 (323)
++++++++.|+++++++|..++++|+++||+|||||+|||++.+ |.++|+|| +||||||||++++|+ ++
T Consensus 67 ~~~~~e~~~i~~~al~i~~~l~~~~~~~Gl~LvD~K~EFG~d~~~~~ivl~de-itpDs~R~w~~~~~~---------~~ 136 (145)
T 2h31_A 67 LIGQTEVDIXSHATQAIFEILEKSWLPQNCTLVDXKIEFGVDVTTKEIVLADV-IDNDSWRLWPSGDRS---------QQ 136 (145)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHHGGGSCEEEEEEECEEEETTTCCEEECSC-CCTTSEEEECCC--------------
T ss_pred HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCEEEEEEC-CCCCCCCCCCCCCCC---------CC
T ss_conf 16888999999999999999999999779768753689866268985999863-588751144588865---------11
Q ss_pred CCHHHHHH
Q ss_conf 23788876
Q gi|254780493|r 247 LDKDFIRN 254 (323)
Q Consensus 247 ~DKq~~R~ 254 (323)
+|||++||
T Consensus 137 ldK~~~R~ 144 (145)
T 2h31_A 137 KDKQSYRD 144 (145)
T ss_dssp --------
T ss_pred CCHHHHCC
T ss_conf 34266505
No 8
>>1kut_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; structural genomics, saicar synthetase, PSI, protein structure initiative; 2.20A {Thermotoga maritima} (A:79-199)
Probab=100.00 E-value=4.7e-41 Score=281.17 Aligned_cols=121 Identities=30% Similarity=0.421 Sum_probs=115.9
Q ss_pred CCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf 46505788521224432200122102476513446632122235688740223210333345777555545666530499
Q gi|254780493|r 91 MFPIELIVRGYLAGNTKTSLLTFYKNGKRKIYEYLLPDNMSDNQKLPYPVITPTTKSSESASGCDQPISPNEIIHRGILT 170 (323)
Q Consensus 91 ~iPiE~VvR~y~~GS~~~~~~~~~k~~~~~~~g~~lp~gl~~~~~l~~Pi~tpstK~~~~~~~~D~~i~~~~~~~~~~~~ 170 (323)
.||||||||||+|||+|++| |+.+|++||+|+|||+||+|. .|||+|+.+++.++|+++
T Consensus 1 ~iPiEvIvR~~~~GS~~rr~------------------g~~eg~~l~~Pive~~~K~d~---~~Dp~i~~~~~~~~~~~~ 59 (121)
T 1kut_A 1 XFPLEVVVRLKKAGSFVRRY------------------GGAEGEDLPVPLVEFFIKDDE---RHDPXVCVDHLEILGIAT 59 (121)
T ss_dssp ECSEEEEEEEECCHHHHHHH------------------CCCTTCEEEEEEEEEEECCGG---GTCCBCCHHHHHHTTSCC
T ss_pred CEEEEEEEECEECCHHHHHC------------------CCCCCCCCCCCCCCCCCCCCC---CCCCCCCHHHHHHHHCCC
T ss_conf 41089999570633346551------------------654465179986541004423---688520045666650134
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCEEEECCCCCCCCCHHHCCCH
Q ss_conf 899989999999999999999886797887423244550886257620004810000000000
Q gi|254780493|r 171 RNQWETISSYALSLFERGCKLALENGLILVDSKYEFGIDKKQNIILADEIHTPDSSRYWEVET 233 (323)
Q Consensus 171 ~~~~~~i~~~sl~i~~~~~~~~~~~GliLvD~K~EFG~~~~g~iiL~DEv~TPDssR~W~~~~ 233 (323)
++++++|+++++++|..++++++++|++|||||+|||++.+|+|+|+||| ||||||||++++
T Consensus 60 ~~e~~~i~~~~l~i~~~l~~~~~~~gl~LvD~K~EFG~~~~g~iiL~DEi-tPDs~RlWd~~~ 121 (121)
T 1kut_A 60 KKQAEKXKEAAVKITLALKEFFERANFELWDIKYEFGLDKDGNVVLGDEI-SPDTFRLRKKGE 121 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECEEECTTCCEEECSCC-STTTEEEEETTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCEEEEEEEE-CCCCCCCCCCCC
T ss_conf 99998789999999999999875249688887389887159809999953-796226788986
No 9
>>2z02_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; 2-layer sandwich, ligase, purine biosynthesis, structural genomics; HET: ATP CIT; 2.03A {Methanocaldococcus jannaschii} PDB: 2yzl_A* (A:1-91,A:223-242)
Probab=99.92 E-value=4.6e-26 Score=185.61 Aligned_cols=88 Identities=18% Similarity=0.235 Sum_probs=82.0
Q ss_pred CCCCCCCCCEEEECCEEEEEECCCCCEEEEEECCEEEECCCCC-CCCCHHHHHHHHHHHHHHHHHHH-CCCCEECCCCCC
Q ss_conf 0054889960230440265875999489998188125557657-77878899999999999985410-233121357763
Q gi|254780493|r 5 SKAYIPELPNYYSGKVRENYFLSDGTRITIATDRLSAFDQNIA-CIPYKGEVLNQITQYWFHHTSDI-CSNHTLDYPDPN 82 (323)
Q Consensus 5 ~~~~~~~l~liy~GKvk~vY~~~d~~ll~v~tDriSAfD~~~~-~Ip~KG~~l~~iS~~~F~~l~~~-i~tH~i~~~~~~ 82 (323)
...+++.++++|+||||+||.++++.+||+|+|||||||++++ .|||||++||+||+|||++|++. |||||++.++++
T Consensus 4 ~~~~~~~~~liyeGK~K~vY~~~d~~lll~fkDriTAfDg~~~~~i~gKG~~~~~iS~~~F~~L~~~GI~TH~I~~~~~~ 83 (111)
T 2z02_A 4 KLEEILKKQPLYSGKAKSIYEIDDDKVLIEFRDDITAGNGAKHDVKQGKGYLNALISSKLFEALEENGVKTHYIKYIEPR 83 (111)
T ss_dssp CHHHHTTSCCSEECSSEEEEECSSSEEEEEECSEEEETTTTEEEECTTHHHHHHHHHHHHHHHHHHTTCCBSEEEEETTT
T ss_pred CHHHHHCCCCCEECCCEEEEECCCCEEEEEEECCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCC
T ss_conf 07767425865102463689818994999996885503752577789806999998888874214444453022036774
Q ss_pred CCEEEECCCC
Q ss_conf 0000002546
Q gi|254780493|r 83 VLVGQQLQMF 92 (323)
Q Consensus 83 ~~~v~k~~~i 92 (323)
+|+|+||+-=
T Consensus 84 ~mivkkle~~ 93 (111)
T 2z02_A 84 YMIAKKVEKD 93 (111)
T ss_dssp EEEEECEETT
T ss_pred CHHHCCCCHH
T ss_conf 3201206464
No 10
>>3kre_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ATP-binding, ligase; 1.80A {Ehrlichia chaffeensis str} (A:1-104,A:241-263)
Probab=99.92 E-value=1.1e-25 Score=183.23 Aligned_cols=89 Identities=18% Similarity=0.240 Sum_probs=81.1
Q ss_pred CCCCCCCCCCCEEEECCEEEEEECCCC-CEEEEEECCEEEECCCCC-CCCCHHHHHHHHHHHHHHHHHHH-CCCCEECCC
Q ss_conf 300054889960230440265875999-489998188125557657-77878899999999999985410-233121357
Q gi|254780493|r 3 ILSKAYIPELPNYYSGKVRENYFLSDG-TRITIATDRLSAFDQNIA-CIPYKGEVLNQITQYWFHHTSDI-CSNHTLDYP 79 (323)
Q Consensus 3 ~l~~~~~~~l~liy~GKvk~vY~~~d~-~ll~v~tDriSAfD~~~~-~Ip~KG~~l~~iS~~~F~~l~~~-i~tH~i~~~ 79 (323)
++...+++.++++|+||||+||+++|+ .++|+|+||+||||++++ .|||||+++|+||+|||++|+++ ||||||+.+
T Consensus 16 ~~~~~~m~~~~liyeGK~K~VY~~~d~~~lil~fkDriTAfDg~~~~~I~gKG~l~~~iS~~~F~~L~~~GIpTHfI~~~ 95 (127)
T 3kre_A 16 TQGPGSMENKEKIYEGKAKIIFATLNPLEVIQHFKDEITAFNNKKAAIIHEKGILNNYISSFLMKKLIDKGIKTHFISLL 95 (127)
T ss_dssp ----------CEEEECSSEEEEECSSTTEEEEEECSEEEETTTTEEEECTTHHHHHHHHHHHHHHHHHHTTCCBSEEEEC
T ss_pred CCCCCCCCCCCEEEECCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCC
T ss_conf 46888664566455226748887599998999997987573640678899888999999999999987413021202014
Q ss_pred CCCCCEEEECCC
Q ss_conf 763000000254
Q gi|254780493|r 80 DPNVLVGQQLQM 91 (323)
Q Consensus 80 ~~~~~~v~k~~~ 91 (323)
++++|+|||+..
T Consensus 96 ~~~~mivkk~~~ 107 (127)
T 3kre_A 96 NQREQLVKKLNL 107 (127)
T ss_dssp SSSEEEEECTTC
T ss_pred CCHHHHHEEHCH
T ss_conf 663342000232
No 11
>>2ywv_A Phosphoribosylaminoimidazole succinocarboxamide synthetase; ADP complex, structural genomics, NPPSFA; HET: ADP; 1.75A {Geobacillus kaustophilus} (A:1-88,A:220-244)
Probab=99.92 E-value=1.4e-25 Score=182.59 Aligned_cols=85 Identities=19% Similarity=0.257 Sum_probs=78.8
Q ss_pred CCCCCCCEEEECCEEEEEECCC-CCEEEEEECCEEEECCCCC-CCCCHHHHHHHHHHHHHHHHHHH-CCCCEECCCCCCC
Q ss_conf 5488996023044026587599-9489998188125557657-77878899999999999985410-2331213577630
Q gi|254780493|r 7 AYIPELPNYYSGKVRENYFLSD-GTRITIATDRLSAFDQNIA-CIPYKGEVLNQITQYWFHHTSDI-CSNHTLDYPDPNV 83 (323)
Q Consensus 7 ~~~~~l~liy~GKvk~vY~~~d-~~ll~v~tDriSAfD~~~~-~Ip~KG~~l~~iS~~~F~~l~~~-i~tH~i~~~~~~~ 83 (323)
+.++..+++|+||||+||+++| +.++|+|+||+||||++++ .|||||++||+||+|||++|++. |||||++.++++.
T Consensus 2 s~m~~~~liYeGK~K~iY~~~d~~~li~~fkDriTAfDg~~~~~IpgKG~~~~~iS~~~F~~L~~~GIpTHfI~~~~~~~ 81 (113)
T 2ywv_A 2 HMPTKQQLLYEGKAKKIYATDEPDVLWVEYKDSATAFNGEKKATIAGKGRLNNEISSLLFLKLREAGIANHFIEKLSPTE 81 (113)
T ss_dssp -CCCEEEEEEECSSEEEEEESSTTEEEEEECSEEEETTTTEEEECTTHHHHHHHHHHHHHHHHHHTTCCBSEEEECSSSE
T ss_pred CCCCCCCEEEECCCEEEEECCCCCEEEEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE
T ss_conf 98866735562267589985999999999979954037605777688378888989999974434554322101359720
Q ss_pred CEEEECCC
Q ss_conf 00000254
Q gi|254780493|r 84 LVGQQLQM 91 (323)
Q Consensus 84 ~~v~k~~~ 91 (323)
|+|+||+.
T Consensus 82 ~ivkklE~ 89 (113)
T 2ywv_A 82 QLVRRVTR 89 (113)
T ss_dssp EEEECCET
T ss_pred EEEEECCH
T ss_conf 58863134
No 12
>>2gqr_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; PURC, ADE2, ADE1, nucleotide complex, octahedral magnesium coordination; HET: ADP; 2.00A {Escherichia coli} PDB: 2gqs_A* (A:1-85)
Probab=99.91 E-value=1.1e-24 Score=176.84 Aligned_cols=81 Identities=15% Similarity=0.141 Sum_probs=74.9
Q ss_pred CCCCEEEECCEEEEEECCC-CCEEEEEECCEEEECCCCC-CCCCHHHHHHHHHHHHHHHHHHH-CCCCEECCCCCCCCEE
Q ss_conf 8996023044026587599-9489998188125557657-77878899999999999985410-2331213577630000
Q gi|254780493|r 10 PELPNYYSGKVRENYFLSD-GTRITIATDRLSAFDQNIA-CIPYKGEVLNQITQYWFHHTSDI-CSNHTLDYPDPNVLVG 86 (323)
Q Consensus 10 ~~l~liy~GKvk~vY~~~d-~~ll~v~tDriSAfD~~~~-~Ip~KG~~l~~iS~~~F~~l~~~-i~tH~i~~~~~~~~~v 86 (323)
.+.+++|+||||+||+++| +.++++|+||+||||++++ .|||||+++|+||++||++|++. ||||||+.+++++|+|
T Consensus 2 ~~~~~lyeGK~K~vY~~~d~~~li~~fkD~iTafdg~~~~~i~gKG~~~~~iS~~~F~~L~~~GI~TH~i~~~~~~~~~v 81 (85)
T 2gqr_A 2 QKQAELYRGKAKTVYSTENPDLLVLEFRNDTSAGDGARIEQFDRKGXVNNKFNYFIXSKLAEAGIPTQXERLLSDTECLV 81 (85)
T ss_dssp CCCEEEEECSSEEEEECSSTTEEEEEECSEECCTTTTCCEECTTHHHHHHHHHHHHHHHHHHTTCCBCEEEECSSSEEEE
T ss_pred CCCCCCEECCCEEEEECCCCCEEEEEEECCCCCCCCEECCCCCCHHHHHCCCHHHHHHHHCCCCCCCCHHCCCCCCEEEE
T ss_conf 86665200146588886999999999818840436530578784137754015654545413687520102588716888
Q ss_pred EECC
Q ss_conf 0025
Q gi|254780493|r 87 QQLQ 90 (323)
Q Consensus 87 ~k~~ 90 (323)
+||+
T Consensus 82 kk~e 85 (85)
T 2gqr_A 82 KKLD 85 (85)
T ss_dssp ECCE
T ss_pred EECC
T ss_conf 7515
No 13
>>1kut_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; structural genomics, saicar synthetase, PSI, protein structure initiative; 2.20A {Thermotoga maritima} (A:1-78,A:200-230)
Probab=99.90 E-value=5.3e-24 Score=172.46 Aligned_cols=82 Identities=21% Similarity=0.245 Sum_probs=75.5
Q ss_pred EEECCEEEEEECCCCCEEEEEECCEEEECCCCC-CCCCHHHHHHHHHHHHHHHHHHH-CCCCEECCCCCCCCEEEECCCC
Q ss_conf 230440265875999489998188125557657-77878899999999999985410-2331213577630000002546
Q gi|254780493|r 15 YYSGKVRENYFLSDGTRITIATDRLSAFDQNIA-CIPYKGEVLNQITQYWFHHTSDI-CSNHTLDYPDPNVLVGQQLQMF 92 (323)
Q Consensus 15 iy~GKvk~vY~~~d~~ll~v~tDriSAfD~~~~-~Ip~KG~~l~~iS~~~F~~l~~~-i~tH~i~~~~~~~~~v~k~~~i 92 (323)
-|+||||+||+++| .++|+|+|||||||++++ .|||||++||+||++||++|++. ||||||+.+++++|+|++|+++
T Consensus 2 ~YeGKtKdvY~~dD-~lil~fkDriTAfDg~k~~~I~gKG~l~~~iS~~~Fe~Le~~GIpTHfI~~i~~~~mlVkk~e~~ 80 (109)
T 1kut_A 2 NYEGKTKIVKVTGD-YALLEFKDDITAGDGLKHDVLTGKGSICAETTAILXKYLSEKGIKTHLVEYIPPRTLKVIPLKIF 80 (109)
T ss_dssp -----CEEEEEETT-EEEEEECCC-----------CCSHHHHHHHHHHHHHHHHHHTTCCBSEEEEETTTEEEECCCECC
T ss_pred CCCCCEEEEEECCC-EEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEEECCCC
T ss_conf 30020018872699-38999978845107525788997309999999999987630598812530467507887761432
Q ss_pred CCEEE
Q ss_conf 50578
Q gi|254780493|r 93 PIELI 97 (323)
Q Consensus 93 PiE~V 97 (323)
.-.+-
T Consensus 81 ~~~~~ 85 (109)
T 1kut_A 81 DKDVY 85 (109)
T ss_dssp CHHHH
T ss_pred CHHHH
T ss_conf 75888
No 14
>>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens} (A:1-89,A:235-260,A:395-425)
Probab=99.88 E-value=1.8e-23 Score=169.04 Aligned_cols=82 Identities=17% Similarity=0.198 Sum_probs=74.6
Q ss_pred CCCCCCCEEEECCEEEEEECC--CCCEEEEEECCEEEECCCCC-CCCCHHHHHHHHHHHHHHHHHHH-CCCCEECCCCCC
Q ss_conf 548899602304402658759--99489998188125557657-77878899999999999985410-233121357763
Q gi|254780493|r 7 AYIPELPNYYSGKVRENYFLS--DGTRITIATDRLSAFDQNIA-CIPYKGEVLNQITQYWFHHTSDI-CSNHTLDYPDPN 82 (323)
Q Consensus 7 ~~~~~l~liy~GKvk~vY~~~--d~~ll~v~tDriSAfD~~~~-~Ip~KG~~l~~iS~~~F~~l~~~-i~tH~i~~~~~~ 82 (323)
+.+...+++|+||||+||+++ ++.++|+|+|||||||++++ .|||||+++|+||++||++|++. |||||++.++++
T Consensus 5 ~~m~~~klIyeGKtK~VY~~~ed~~~lil~fkDriTAfDg~~~~~I~GKG~i~n~iS~~~Fe~L~~~GI~THfI~~~~~~ 84 (146)
T 2h31_A 5 EVLNIGKKLYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKITSCIFQLLQEAGIKTAFTRKCGET 84 (146)
T ss_dssp --CCCCCCCCBCSSCEEECCTTSCSSCEEEEC---------------CCHHHHHHHHHHHHHHHHHHTCCBSCCEECSSS
T ss_pred HHHHCCCEEEECCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC
T ss_conf 24543896320467488734899998999997897462675779999878999999999999873079997362058997
Q ss_pred CCEEEE
Q ss_conf 000000
Q gi|254780493|r 83 VLVGQQ 88 (323)
Q Consensus 83 ~~~v~k 88 (323)
+|+||+
T Consensus 85 ~miVk~ 90 (146)
T 2h31_A 85 AFIAPK 90 (146)
T ss_dssp EEEEC-
T ss_pred EEEEEC
T ss_conf 577762
No 15
>>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens} (A:90-234)
Probab=91.68 E-value=0.17 Score=29.12 Aligned_cols=77 Identities=16% Similarity=0.030 Sum_probs=47.8
Q ss_pred CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEE
Q ss_conf 21222356887402232103333457775555456665304998999899999999999999998867978874232445
Q gi|254780493|r 128 DNMSDNQKLPYPVITPTTKSSESASGCDQPISPNEIIHRGILTRNQWETISSYALSLFERGCKLALENGLILVDSKYEFG 207 (323)
Q Consensus 128 ~gl~~~~~l~~Pi~tpstK~~~~~~~~D~~i~~~~~~~~~~~~~~~~~~i~~~sl~i~~~~~~~~~~~GliLvD~K~EFG 207 (323)
.+..+|.+||+|+++++.|.+. .|||.++.++.+.+++.... .-++.+-++.+.+.+.+..-+|.+
T Consensus 24 ~~~~~G~~l~~~l~e~~~k~d~---~~dP~~k~e~~~~~~~a~~~-----~~~~~~e~~~i~~~al~i~~~l~~------ 89 (145)
T 2h31_A 24 PGVKEGYKFYPPKVELFFKDDA---NNDPQWSEEQLIAAKFCFAG-----LLIGQTEVDIXSHATQAIFEILEK------ 89 (145)
T ss_dssp TTCCTTCBCSSCCEEEESCCCS---SCCCCBCHHHHHTTTCEETT-----EECCHHHHHHHHHHHHHHHHHHHH------
T ss_pred CCCCCCCCCCCCCCCCCCCCCC---CCCCCCCHHHHHHHHHHHHH-----HHCCHHHHHHHHHHHHHHHHHHHH------
T ss_conf 6763677588421211124456---78954011214566667775-----016888999999999999999999------
Q ss_pred ECCCCCEEEEC
Q ss_conf 50886257620
Q gi|254780493|r 208 IDKKQNIILAD 218 (323)
Q Consensus 208 ~~~~g~iiL~D 218 (323)
.-....++|+|
T Consensus 90 ~~~~~Gl~LvD 100 (145)
T 2h31_A 90 SWLPQNCTLVD 100 (145)
T ss_dssp HHGGGSCEEEE
T ss_pred HHHHCCCEEEE
T ss_conf 99977976875
No 16
>>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Zea mays} (A:116-198)
Probab=33.01 E-value=30 Score=14.69 Aligned_cols=48 Identities=10% Similarity=0.086 Sum_probs=33.0
Q ss_pred CCCHHHHHHHHHHCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 323788876553112-236799999898999999999999999860886
Q gi|254780493|r 246 GLDKDFIRNWILTRC-NPYRDNIPDIPENIILRTSQTYIAAYEKITGLK 293 (323)
Q Consensus 246 s~DKq~~R~wl~~~~-~~~~~~~P~LP~~vv~~~~~~Y~~~~e~lTG~~ 293 (323)
..+++.|..-+...- ..+...-.+|+.+-...+...|.++|++-||++
T Consensus 35 gi~~~~Fe~~l~~~k~~~g~~~d~dl~~~~l~~Lv~~yk~i~~~~tG~P 83 (83)
T 1vbg_A 35 DIPRSLFEEKLEHMKESKGLKNDTDLTASDLKELVGQYKEVYLSAKGEP 83 (83)
T ss_dssp CCCHHHHHHHHHHHHHHHTCSSGGGCCHHHHHHHHHHHHHHHHHHHSSC
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 8875768999999998649864222678889999999988788751885
No 17
>>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase- inhibitor complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} (A:1-34,A:167-340)
Probab=25.34 E-value=41 Score=13.85 Aligned_cols=123 Identities=15% Similarity=0.043 Sum_probs=68.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCEEEECCCCCCCCCHHHCCCHHHHHHHCCCCCCCC
Q ss_conf 49989998999999999999999988679788742324455088625762000481000000000001233125444432
Q gi|254780493|r 168 ILTRNQWETISSYALSLFERGCKLALENGLILVDSKYEFGIDKKQNIILADEIHTPDSSRYWEVETYEKSFREGITPIGL 247 (323)
Q Consensus 168 ~~~~~~~~~i~~~sl~i~~~~~~~~~~~GliLvD~K~EFG~~~~g~iiL~DEv~TPDssR~W~~~~ye~~~~~g~~~~s~ 247 (323)
-++..+ +......+.. +-.++-++||++=|.|-|==+-.++++.|+| +| .+|.-...++- -..+...
T Consensus 46 ~l~~~~---~~~i~~qil~-gL~yLH~~~IiHRDIKP~NILi~~~~vKL~D-FG---la~~~~~~~~~-----~GTp~Ym 112 (208)
T 2pzi_A 46 KLPVAE---AIAYLLEILP-ALSYLHSIGLVYNDLKPENIMLTEEQLKLID-LG---AVSRINSFGYL-----YGTPGFQ 112 (208)
T ss_dssp CCCHHH---HHHHHHHHHH-HHHHHHHTTEECCCCSGGGEEECSSCEEECC-CT---TCEETTCCSCC-----CCCTTTS
T ss_pred CCCHHH---HHHHHHHHHH-HHHHHHHCCEEECCCCHHHEEEECCCEEEEE-CC---CCEECCCCCCE-----EECCCCC
T ss_conf 999999---9999999999-9999997991207677899688699789984-68---88465899976-----6791205
Q ss_pred CHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 37888765531122367999998989999999999999998608866478-----8678999999999999999852
Q gi|254780493|r 248 DKDFIRNWILTRCNPYRDNIPDIPENIILRTSQTYIAAYEKITGLKFIAD-----NSELPPLERIRNNLRKYTHRHL 319 (323)
Q Consensus 248 DKq~~R~wl~~~~~~~~~~~P~LP~~vv~~~~~~Y~~~~e~lTG~~f~~~-----~~~~~~~erI~~~l~~~~~~~~ 319 (323)
-+|.++.-... ..++...=+.+||.+||..++.. .+..++.-.+...+++++.+-+
T Consensus 113 APEi~~~~~~~----------------~~DIwSlGvilyelltg~~p~~~~~~~~~~~~~~~~~~~~~l~~li~~~L 173 (208)
T 2pzi_A 113 APEIVRTGPTV----------------ATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVLKTYDSYGRLLRRAI 173 (208)
T ss_dssp CTTHHHHCSCH----------------HHHHHHHHHHHHHHHSCCCEETTEECSSCCTTCHHHHHCHHHHHHHHHHT
T ss_pred CHHHHCCCCCC----------------HHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHC
T ss_conf 79986789997----------------35599999999999858899899772234556788898989999999976
No 18
>>1jdw_A L-arginine\:glycine amidinotransferase; creatine biosynthesis, catalytic triad, reaction mechanism, novel fold, fivefold pseudosymmetry; 1.90A {Homo sapiens} (A:84-116)
Probab=25.15 E-value=22 Score=15.59 Aligned_cols=29 Identities=24% Similarity=0.384 Sum_probs=25.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99998989999999999999998608866
Q gi|254780493|r 266 NIPDIPENIILRTSQTYIAAYEKITGLKF 294 (323)
Q Consensus 266 ~~P~LP~~vv~~~~~~Y~~~~e~lTG~~f 294 (323)
-.|+...||...|.++|-..|++--|+.|
T Consensus 4 ~VPpFTvEVkAnTy~k~W~Fyq~~GG~~f 32 (33)
T 1jdw_A 4 CVPPFTIEVKANTYEKYWPFYQKQGGHYF 32 (33)
T ss_dssp BCCCCCHHHHTTSCGGGHHHHHHHTTSBS
T ss_pred CCCCCCHHHCCCCCHHHHHHHCCCCCCCC
T ss_conf 78998744313782465111001245667
No 19
>>3cxj_A Uncharacterized protein; PSI-II, structural genomics, protein structure initiative; 2.80A {Methanothermobacter thermautotrophicusstr} (A:)
Probab=25.04 E-value=29 Score=14.84 Aligned_cols=16 Identities=19% Similarity=0.289 Sum_probs=7.6
Q ss_pred CCHHHHHHHHCCCHHH
Q ss_conf 5545666530499899
Q gi|254780493|r 158 ISPNEIIHRGILTRNQ 173 (323)
Q Consensus 158 i~~~~~~~~~~~~~~~ 173 (323)
|+.++..++.-++.++
T Consensus 61 is~~H~~~L~~l~~ee 76 (165)
T 3cxj_A 61 VSPEHQAGIRALSXEK 76 (165)
T ss_dssp CCTTHHHHHHHSCHHH
T ss_pred ECHHHHHHHHHCCHHH
T ss_conf 8899999998589888
No 20
>>2dyi_A Probable 16S rRNA-processing protein RIMM; ribosomal protein S19, PRC-barrel, structural genomics, NPPSFA; 2.00A {Thermus thermophilus HB8} PDB: 2dog_A (A:88-162)
Probab=22.65 E-value=46 Score=13.53 Aligned_cols=29 Identities=14% Similarity=-0.030 Sum_probs=22.2
Q ss_pred EECCEEEEEECCCCCEEEEEECCEEEECC
Q ss_conf 30440265875999489998188125557
Q gi|254780493|r 16 YSGKVRENYFLSDGTRITIATDRLSAFDQ 44 (323)
Q Consensus 16 y~GKvk~vY~~~d~~ll~v~tDriSAfD~ 44 (323)
.=|+|.+|.+.+.+.++.+.++..+.+++
T Consensus 18 ~iG~V~~V~~~ga~dvl~I~~~~~~~~~~ 46 (75)
T 2dyi_A 18 QVGEVVDILDAGAQDVLIIRGVGERLRDR 46 (75)
T ss_dssp EEEEEEEEEEETTEEEEEEEECCSSGGGS
T ss_pred CCEEEEEEECCCCCCEEEEECCCCCCCCC
T ss_conf 44589897115995099997587557799
No 21
>>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, adaptor protein, cytoplasm, alternative splicing, ATP- binding, cell cycle; HET: ATP CIT; 2.35A {Homo sapiens} (B:108-389)
Probab=20.05 E-value=52 Score=13.19 Aligned_cols=40 Identities=18% Similarity=-0.051 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 9999999999998608866478867899999999999999
Q gi|254780493|r 276 LRTSQTYIAAYEKITGLKFIADNSELPPLERIRNNLRKYT 315 (323)
Q Consensus 276 ~~~~~~Y~~~~e~lTG~~f~~~~~~~~~~erI~~~l~~~~ 315 (323)
.++...=+-+||.+||..-+......+...+|.+......
T Consensus 111 ~DiWSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~ 150 (282)
T 3gni_B 111 SDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL 150 (282)
T ss_dssp HHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf 7799999999999978799898599999999971898864
Done!