HHsearch results for GI: 254780493 and protein with PDBid: 3nua_A
>3nua_A Phosphoribosylaminoimidazole-succinocarboxamide S; alpha-beta structure, csgid, ligase; HET: ADP AMP CIT; 1.40A {Clostridium perfringens atcc 13124}
Probab=100.00 E-value=0 Score=490.86 Aligned_cols=233 Identities=25% Similarity=0.339 Sum_probs=215.3
Q ss_pred CCCCCCCCEEEECCEEEEEECCC-CCEEEEEECCEEEECCCCC-CCCCHHHHHHHHHHHHHHHHH-HHCCCCEECCCCCC
Q ss_conf 05488996023044026587599-9489998188125557657-778788999999999999854-10233121357763
Q gi|254780493|r 6 KAYIPELPNYYSGKVRENYFLSD-GTRITIATDRLSAFDQNIA-CIPYKGEVLNQITQYWFHHTS-DICSNHTLDYPDPN 82 (323)
Q Consensus 6 ~~~~~~l~liy~GKvk~vY~~~d-~~ll~v~tDriSAfD~~~~-~Ip~KG~~l~~iS~~~F~~l~-~~i~tH~i~~~~~~ 82 (323)
+..+.+++++|+||||+||++++ +.++|++|||+||||++++ .|||||++||+||+|||++|+ .+++|||++..+++
T Consensus 2 ~~~~~~~~lly~GKvkdvY~~~~~~~lli~~tDriSafD~~~~~~Ip~KG~il~~~s~~~F~~l~~~gi~th~i~~~~~~ 81 (238)
T 3nua_A 2 NAMVNQLEMLYEGKAKKIYATDKEDMVIVHYKDDATAFNGEKKAQIESKGVLNNEITSLIFEMLNKEGIKTHFVEKLNDR 81 (238)
T ss_dssp -CCCCEEEEEEECSSEEEEEESSTTEEEEEECSEEEETTTTEEEECTTHHHHHHHHHHHHHHHHHHTTCCBSEEEECSSS
T ss_pred HHHHHCCCCEEECCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 20333063026313648998399999999997986563643478899778999999999998744467554310126996
Q ss_pred CCEEEECCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHH
Q ss_conf 00000025465057885212244322001221024765134466321222356887402232103333457775555456
Q gi|254780493|r 83 VLVGQQLQMFPIELIVRGYLAGNTKTSLLTFYKNGKRKIYEYLLPDNMSDNQKLPYPVITPTTKSSESASGCDQPISPNE 162 (323)
Q Consensus 83 ~~~v~k~~~iPiE~VvR~y~~GS~~~~~~~~~k~~~~~~~g~~lp~gl~~~~~l~~Pi~tpstK~~~~~~~~D~~i~~~~ 162 (323)
+|+|+||+|||+|||||||+|||+|++| |+.++++|++|+++|++|.+. .|||+++.++
T Consensus 82 ~~lvkk~~~iPiE~IvR~y~~GS~~~~y------------------g~~~~~~~~~~~~~~~~k~~~---~~d~~~~~~~ 140 (238)
T 3nua_A 82 DQLCKKVEIVPLEVIVRNVAAGSMAKRL------------------GLEEGYELKTTVFELSYKDDS---LGDPLINDYH 140 (238)
T ss_dssp EEEEECCEECSEEEEEEEEECHHHHHHH------------------TCCTTEEEEEEEEEEEECCGG---GTCCEECHHH
T ss_pred EEEEEECCCCCEEEEEEEEECCCCCCCC------------------CCCCCCCCCCCCCCCCCCCCC---CCCCCCCHHH
T ss_conf 5998423511679999999835540215------------------866565479876533223456---6786657899
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCEEEECCCCCCCCCHHHCCCHHHHHHHCCC
Q ss_conf 66530499899989999999999999999886797887423244550886257620004810000000000012331254
Q gi|254780493|r 163 IIHRGILTRNQWETISSYALSLFERGCKLALENGLILVDSKYEFGIDKKQNIILADEIHTPDSSRYWEVETYEKSFREGI 242 (323)
Q Consensus 163 ~~~~~~~~~~~~~~i~~~sl~i~~~~~~~~~~~GliLvD~K~EFG~~~~g~iiL~DEv~TPDssR~W~~~~ye~~~~~g~ 242 (323)
+.+.++++.++++.+++.++++|+.++++++++||+|||||||||++ +|+|||+||| ||||||||++++|+
T Consensus 141 ~~~~~~~~~~e~~~i~~~~~~v~~~~~~~~~~~GliLvD~K~EFG~~-~g~lvL~DEi-TPDssR~W~~~~~e------- 211 (238)
T 3nua_A 141 AVGIGATTFEELNKIYEITAKVNEILKEAFKKQNINLIDFKLEFGRY-NGEILLADEI-SPDTCRFWDATTGE------- 211 (238)
T ss_dssp HHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEEEE-TTEEEEESCC-STTTEEEEETTTCC-------
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCC-CCEEEEEEEE-CCCCCCCCCCCCCC-------
T ss_conf 99866411555767999999999999999987898899887893254-9959999863-69733122388876-------
Q ss_pred CCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 444323788876553112236799999898999999999999999860
Q gi|254780493|r 243 TPIGLDKDFIRNWILTRCNPYRDNIPDIPENIILRTSQTYIAAYEKIT 290 (323)
Q Consensus 243 ~~~s~DKq~~R~wl~~~~~~~~~~~P~LP~~vv~~~~~~Y~~~~e~lT 290 (323)
++|||++|+|+. ++.+.|.++++||.
T Consensus 212 ---~~DK~~~R~~l~-------------------~v~~~Y~ev~~rl~ 237 (238)
T 3nua_A 212 ---KMDKDRFRRDMG-------------------NVINGYREVLNRLR 237 (238)
T ss_dssp ---BCSTHHHHTTCS-------------------CHHHHHHHHHHHHT
T ss_pred ---CCCHHHHHHHHH-------------------HHHHHHHHHHHHHH
T ss_conf ---457599876665-------------------36099999999851