HHSEARCH alignment of GI: 254780493 and SCOP domain: d1kuta_

Alignment
>d1kuta_ d.143.1.1 (A:) SAICAR synthase {Thermotoga maritima [TaxId: 2336]}
Probab=100.00  E-value=0  Score=463.38  Aligned_cols=217  Identities=26%  Similarity=0.304  Sum_probs=196.3

Q ss_pred             EEEEEECCCCCEEEEEECCEEEECCCCC-CCCCHHHHHHHHHHHHHHHHHHH-CCCCEECCCCCCCCEEEECCCCCCEEE
Q ss_conf             0265875999489998188125557657-77878899999999999985410-233121357763000000254650578
Q gi|254780493|r   20 VRENYFLSDGTRITIATDRLSAFDQNIA-CIPYKGEVLNQITQYWFHHTSDI-CSNHTLDYPDPNVLVGQQLQMFPIELI   97 (323)
Q Consensus        20 vk~vY~~~d~~ll~v~tDriSAfD~~~~-~Ip~KG~~l~~iS~~~F~~l~~~-i~tH~i~~~~~~~~~v~k~~~iPiE~V   97 (323)
                      +|.+|..+| .+||+|||||||||++++ .|||||++||+||+|||++|++. |||||++.++|++|+|++|+|||||||
T Consensus         1 tki~~~~~d-~ll~~f~DriSAfD~~~~~~IpgKG~~l~~is~~~F~~L~~~gI~tH~i~~~~~~~~~vkk~~~iPiE~V   79 (224)
T d1kuta_           1 TKIVKVTGD-YALLEFKDDITAGDGLKHDVLTGKGSICAETTAILMKYLSEKGIKTHLVEYIPPRTLKVIPLKMFPLEVV   79 (224)
T ss_dssp             CEEEEEETT-EEEEEECCC-----------CCSHHHHHHHHHHHHHHHHHHTTCCBSEEEEETTTEEEECCCEECSEEEE
T ss_pred             CEEEEECCC-EEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHCCCCCEEEE
T ss_conf             908993799-8999997886353761678899820999999999999741178433200356721233201266776999


Q ss_pred             EECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCHHHHHHH
Q ss_conf             85212244322001221024765134466321222356887402232103333457775555456665304998999899
Q gi|254780493|r   98 VRGYLAGNTKTSLLTFYKNGKRKIYEYLLPDNMSDNQKLPYPVITPTTKSSESASGCDQPISPNEIIHRGILTRNQWETI  177 (323)
Q Consensus        98 vR~y~~GS~~~~~~~~~k~~~~~~~g~~lp~gl~~~~~l~~Pi~tpstK~~~~~~~~D~~i~~~~~~~~~~~~~~~~~~i  177 (323)
                      ||||++||+|++|.                  ..++.+|++|++++++|+++   .|||+|+.+++.+.+++++++++.+
T Consensus        80 vR~y~~GS~~~~y~------------------~~~g~~~~~pl~e~~~k~~~---~~D~~i~~~~~~~~~~~~~~~~~~i  138 (224)
T d1kuta_          80 VRLKKAGSFVRRYG------------------GAEGEDLPVPLVEFFIKDDE---RHDPMVCVDHLEILGIATKKQAEKM  138 (224)
T ss_dssp             EEEECCHHHHHHHC------------------CCTTCEEEEEEEEEEECCGG---GTCCBCCHHHHHHTTSCCHHHHHHH
T ss_pred             EEEEEHHHHHHHCC------------------CCCCCCCCCCCCCCHHCCCC---CCCCCCCHHHHHHHHCCCHHHHHHH
T ss_conf             96437177675426------------------65565477544320002444---6763215777767622778888999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCEEEECCCCCCCCCHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf             99999999999999886797887423244550886257620004810000000000012331254444323788876553
Q gi|254780493|r  178 SSYALSLFERGCKLALENGLILVDSKYEFGIDKKQNIILADEIHTPDSSRYWEVETYEKSFREGITPIGLDKDFIRNWIL  257 (323)
Q Consensus       178 ~~~sl~i~~~~~~~~~~~GliLvD~K~EFG~~~~g~iiL~DEv~TPDssR~W~~~~ye~~~~~g~~~~s~DKq~~R~wl~  257 (323)
                      +++++++|..++++|+++||+|||||||||++.+|+|+|+||| ||||||||+..            +++|||++|+|+.
T Consensus       139 ~~~al~i~~~l~~~~~~~gliLvD~K~EFG~~~~g~ivL~DEI-tpDs~R~w~~~------------~~~DK~~~R~~l~  205 (224)
T d1kuta_         139 KEAAVKITLALKEFFERANFELWDIKYEFGLDKDGNVVLGDEI-SPDTFRLRKKG------------EIFDKDVYRRDLG  205 (224)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEEEEEEEECEEECTTCCEEECSCC-STTTEEEEETT------------CCCCHHHHHHGGG
T ss_pred             HHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCCCCEEEEECC-CCCCCCCCCCC------------CCCCHHHHHHCCC
T ss_conf             9999999999999986346242321158726699929999803-89754617898------------7448788871022


Q ss_pred             HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             112236799999898999999999999999860
Q gi|254780493|r  258 TRCNPYRDNIPDIPENIILRTSQTYIAAYEKIT  290 (323)
Q Consensus       258 ~~~~~~~~~~P~LP~~vv~~~~~~Y~~~~e~lT  290 (323)
                                         ++.+.|.++++++-
T Consensus       206 -------------------~~~~~Y~ev~~~~~  219 (224)
T d1kuta_         206 -------------------DPLKKYREVLELCR  219 (224)
T ss_dssp             -------------------CTTHHHHHHHHHHH
T ss_pred             -------------------CHHHHHHHHHHHHH
T ss_conf             -------------------04389999999998


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: SAICAR synthase-like
superfamily: SAICAR synthase-like
family: SAICAR synthase
domain: SAICAR synthase
species: Thermotoga maritima [TaxId: 2336]