RPSBLAST alignment of GI: 254780493 and protein with PDBid: 3nua

>3nua_A Phosphoribosylaminoimidazole-succinocarboxamide S; alpha-beta structure, csgid, ligase; HET: ADP AMP CIT; 1.40A {Clostridium perfringens atcc 13124} Length = 238
 Score =  171 bits (435), Expect = 1e-43
 Identities = 63/264 (23%), Positives = 106/264 (40%), Gaps = 36/264 (13%)

Query: 5   SKAYIPELPNYYSGKVRENYFLSDGTR-ITIATDRLSAFD-QNIACIPYKGEVLNQITQY 62
           S A + +L   Y GK ++ Y        I    D  +AF+ +  A I  KG + N+IT  
Sbjct: 1   SNAMVNQLEMLYEGKAKKIYATDKEDMVIVHYKDDATAFNGEKKAQIESKGVLNNEITSL 60

Query: 63  WFHH-TSDICSNHTLDYPDPNVLVGQQLQMFPIELIVRGYLAGNTKTSLLTFYKNGKRKI 121
            F     +    H ++  +    + +++++ P+E+IVR   AG+    L           
Sbjct: 61  IFEMLNKEGIKTHFVEKLNDRDQLCKKVEIVPLEVIVRNVAAGSMAKRL----------- 109

Query: 122 YEYLLPDNMSDNQKLPYPVITPTTKSSESASGCDQPISPNEIIHRGILTRNQWETISSYA 181
                   + +  +L   V   + K        D  I+    +  G  T  +   I    
Sbjct: 110 -------GLEEGYELKTTVFELSYKDDSLG---DPLINDYHAVGIGATTFEELNKIYEIT 159

Query: 182 LSLFERGCKLALENGLILVDSKYEFGIDKKQNIILADEIHTPDSSRYWEVETYEKSFREG 241
             + E   +   +  + L+D K EFG    + I+LADEI +PD+ R+W+  T EK     
Sbjct: 160 AKVNEILKEAFKKQNINLIDFKLEFGRYNGE-ILLADEI-SPDTCRFWDATTGEK----- 212

Query: 242 ITPIGLDKDFIRNWILTRCNPYRD 265
                +DKD  R  +    N YR+
Sbjct: 213 -----MDKDRFRRDMGNVINGYRE 231