RPSBLAST alignment of GI: 254780493 and protein with PDBid: 3nua
>3nua_A Phosphoribosylaminoimidazole-succinocarboxamide S; alpha-beta structure, csgid, ligase; HET: ADP AMP CIT; 1.40A {Clostridium perfringens atcc 13124} Length = 238
Score = 171 bits (435), Expect = 1e-43
Identities = 63/264 (23%), Positives = 106/264 (40%), Gaps = 36/264 (13%)
Query: 5 SKAYIPELPNYYSGKVRENYFLSDGTR-ITIATDRLSAFD-QNIACIPYKGEVLNQITQY 62
S A + +L Y GK ++ Y I D +AF+ + A I KG + N+IT
Sbjct: 1 SNAMVNQLEMLYEGKAKKIYATDKEDMVIVHYKDDATAFNGEKKAQIESKGVLNNEITSL 60
Query: 63 WFHH-TSDICSNHTLDYPDPNVLVGQQLQMFPIELIVRGYLAGNTKTSLLTFYKNGKRKI 121
F + H ++ + + +++++ P+E+IVR AG+ L
Sbjct: 61 IFEMLNKEGIKTHFVEKLNDRDQLCKKVEIVPLEVIVRNVAAGSMAKRL----------- 109
Query: 122 YEYLLPDNMSDNQKLPYPVITPTTKSSESASGCDQPISPNEIIHRGILTRNQWETISSYA 181
+ + +L V + K D I+ + G T + I
Sbjct: 110 -------GLEEGYELKTTVFELSYKDDSLG---DPLINDYHAVGIGATTFEELNKIYEIT 159
Query: 182 LSLFERGCKLALENGLILVDSKYEFGIDKKQNIILADEIHTPDSSRYWEVETYEKSFREG 241
+ E + + + L+D K EFG + I+LADEI +PD+ R+W+ T EK
Sbjct: 160 AKVNEILKEAFKKQNINLIDFKLEFGRYNGE-ILLADEI-SPDTCRFWDATTGEK----- 212
Query: 242 ITPIGLDKDFIRNWILTRCNPYRD 265
+DKD R + N YR+
Sbjct: 213 -----MDKDRFRRDMGNVINGYRE 231