RPS-BLAST 2.2.22 [Sep-27-2009]
Database: pdb70
24,244 sequences; 5,693,230 total letters
Searching..................................................done
Query= gi|254780493|ref|YP_003064906.1|
phosphoribosylaminoimidazole-succinocarboxamide synthase [Candidatus
Liberibacter asiaticus str. psy62]
(323 letters)
>2cnq_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; ligase,
phosphoribosylaminoimidazolesuccinocarboxamide (saicar)
SYN ligase; HET: ADP AMZ AMP; 1.00A {Saccharomyces
cerevisiae} SCOP: d.143.1.1 PDB: 1a48_A* 1obd_A* 2cnu_A*
2cnv_A* 1obg_A*
Length = 306
Score = 189 bits (481), Expect = 8e-49
Identities = 90/308 (29%), Positives = 153/308 (49%), Gaps = 38/308 (12%)
Query: 11 ELPNYYSGKVRENYFLSDGTRITIATDRLSAFD-QNIACIPYKGEVLNQITQYWFHHTSD 69
LP GKVR+ Y + GT + +ATDR+SA+D IP KG +L +++++WF S+
Sbjct: 11 ILPLVARGKVRDIYEVDAGTLLFVATDRISAYDVIMENSIPEKGILLTKLSEFWFKFLSN 70
Query: 70 ICSNHTLDYPDP----------------------NVLVGQQLQMFPIELIVRGYLAGNTK 107
NH +D L+ + ++ P+E+IVRGY+ G+
Sbjct: 71 DVRNHLVDIAPGKTIFDYLPAKLSEPKYKTQLEDRSLLVHKHKLIPLEVIVRGYITGSAW 130
Query: 108 TSLLTFYKNGKRKIYEYLLPDNMSDNQKLPYPVITPTTKSSESASGCDQPISPNEIIHRG 167
++ P + ++Q+ P P+ TP+TK+ + + + +
Sbjct: 131 KE-----YVKTGTVHGLKQPQGLKESQEFPEPIFTPSTKAEQ----GEHDENISPAQAAE 181
Query: 168 ILTRNQWETISSYALSLFERGCKLALENGLILVDSKYEFGIDKKQN-IILADEIHTPDSS 226
++ + ++ A+ L+ + A E G+I+ D+K+EFGID+K N IIL DE+ TPDSS
Sbjct: 182 LVGEDLSRRVAELAVKLYSKCKDYAKEKGIIIADTKFEFGIDEKTNEIILVDEVLTPDSS 241
Query: 227 RYWEVETYEKSFREGITPIGLDKDFIRNWILTRCNPYRDNIPDIPENIILRTSQTYIAAY 286
R+W +Y + G + DK F+R+W+ + +P++I+ RT YI AY
Sbjct: 242 RFWNGASY----KVGESQDSYDKQFLRDWLTANKLNGVNG-VKMPQDIVDRTRAKYIEAY 296
Query: 287 EKITGLKF 294
E +TG K+
Sbjct: 297 ETLTGSKW 304
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase;
2.80A {Homo sapiens}
Length = 425
Score = 174 bits (442), Expect = 3e-44
Identities = 55/307 (17%), Positives = 97/307 (31%), Gaps = 29/307 (9%)
Query: 16 YSGKVRENYFLSD--GTRITIATDRLSAFD-QNIACIPYKGEVLNQITQYWFHHTSDI-C 71
Y GK +E Y L D G + + D+++A + + K + N+IT F +
Sbjct: 14 YEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKITSCIFQLLQEAGI 73
Query: 72 SNHTLDYPDPNVLVGQQLQMFPIELIVRGYLAGNTKTSLLTFYKNGKRKIYEYLLPDNMS 131
+ Q +M PIE + R G +F K Y
Sbjct: 74 KTAFTRKCGETAFIAPQCEMIPIEWVCRRIATG-------SFLKRNPGVKEGYKFYPPKV 126
Query: 132 DNQKLPYPVITPTTKSSESASGCDQPISPNEIIHRGILTRNQWETISSYALSLFERGCKL 191
+ P +Q I+ ++ + + + +S ++FE K
Sbjct: 127 ELFFKDDANNDPQWSE-------EQLIAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKS 179
Query: 192 ALENGLILVDSKYEFGIDKKQNIILADEIHTPDSSRYWEVETYEKSFREGITPIGLDKDF 251
L LVD K EFG+D I+ ++ DS R W + DK
Sbjct: 180 WLPQNCTLVDMKIEFGVDVTTKEIVLADVIDNDSWRLWPSGDRSQQK---------DKQS 230
Query: 252 IRNWILTRCNPYRDNIPDIPENIILRTSQTYIAAYEKITGLKFIADNSELPPLERIRNNL 311
R+ + E + R + + + + S+L E+I+
Sbjct: 231 YRDL-KEVTPEGLQMVKKNFEWVAERVELLLKSESQCRVVV-LMGSTSDLGHCEKIKKAC 288
Query: 312 RKYTHRH 318
+
Sbjct: 289 GNFGIPC 295
>3nua_A Phosphoribosylaminoimidazole-succinocarboxamide S; alpha-beta
structure, csgid, ligase; HET: ADP AMP CIT; 1.40A
{Clostridium perfringens atcc 13124}
Length = 238
Score = 171 bits (435), Expect = 1e-43
Identities = 63/264 (23%), Positives = 106/264 (40%), Gaps = 36/264 (13%)
Query: 5 SKAYIPELPNYYSGKVRENYFLSDGTR-ITIATDRLSAFD-QNIACIPYKGEVLNQITQY 62
S A + +L Y GK ++ Y I D +AF+ + A I KG + N+IT
Sbjct: 1 SNAMVNQLEMLYEGKAKKIYATDKEDMVIVHYKDDATAFNGEKKAQIESKGVLNNEITSL 60
Query: 63 WFHH-TSDICSNHTLDYPDPNVLVGQQLQMFPIELIVRGYLAGNTKTSLLTFYKNGKRKI 121
F + H ++ + + +++++ P+E+IVR AG+ L
Sbjct: 61 IFEMLNKEGIKTHFVEKLNDRDQLCKKVEIVPLEVIVRNVAAGSMAKRL----------- 109
Query: 122 YEYLLPDNMSDNQKLPYPVITPTTKSSESASGCDQPISPNEIIHRGILTRNQWETISSYA 181
+ + +L V + K D I+ + G T + I
Sbjct: 110 -------GLEEGYELKTTVFELSYKDDSLG---DPLINDYHAVGIGATTFEELNKIYEIT 159
Query: 182 LSLFERGCKLALENGLILVDSKYEFGIDKKQNIILADEIHTPDSSRYWEVETYEKSFREG 241
+ E + + + L+D K EFG + I+LADEI +PD+ R+W+ T EK
Sbjct: 160 AKVNEILKEAFKKQNINLIDFKLEFGRYNGE-ILLADEI-SPDTCRFWDATTGEK----- 212
Query: 242 ITPIGLDKDFIRNWILTRCNPYRD 265
+DKD R + N YR+
Sbjct: 213 -----MDKDRFRRDMGNVINGYRE 231
>2z02_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; 2-layer
sandwich, ligase, purine biosynthesis, structural
genomics; HET: ATP CIT; 2.03A {Methanocaldococcus
jannaschii} PDB: 2yzl_A*
Length = 242
Score = 165 bits (418), Expect = 2e-41
Identities = 66/252 (26%), Positives = 111/252 (44%), Gaps = 34/252 (13%)
Query: 16 YSGKVRENYFLSDGTRITIATDRLSAFD-QNIACIPYKGEVLNQITQYWFH-HTSDICSN 73
YSGK + Y + D + D ++A + KG + I+ F +
Sbjct: 15 YSGKAKSIYEIDDDKVLIEFRDDITAGNGAKHDVKQGKGYLNALISSKLFEALEENGVKT 74
Query: 74 HTLDYPDPNVLVGQQLQMFPIELIVRGYLAGNTKTSLLTFYKNGKRKIYEYLLPDNMSDN 133
H + Y +P ++ +++++ PIE+IVR AG+ +
Sbjct: 75 HYIKYIEPRYMIAKKVEIIPIEVIVRNIAAGSLCRR------------------YPFEEG 116
Query: 134 QKLPYPVITPTTKSSESASGCDQPISPNEIIHRGILTRNQWETISSYALSLFERGCKLAL 193
++LP+P++ K+ E D ++ + + G+ TR + I AL + E KL
Sbjct: 117 KELPFPIVQFDYKNDE---YGDPMLNEDIAVALGLATREELNKIKEIALKVNEVLKKLFD 173
Query: 194 ENGLILVDSKYEFGIDKKQNIILADEIHTPDSSRYWEVETYEKSFREGITPIGLDKDFIR 253
E G+ILVD K E G D++ N+++ADEI +PD+ R W+ ET + LDKD R
Sbjct: 174 EKGIILVDFKIEIGKDREGNLLVADEI-SPDTMRLWDKETRDV----------LDKDVFR 222
Query: 254 NWILTRCNPYRD 265
+ YR
Sbjct: 223 KDLGDVIAKYRI 234
>2ywv_A Phosphoribosylaminoimidazole succinocarboxamide synthetase; ADP
complex, structural genomics, NPPSFA; HET: ADP; 1.75A
{Geobacillus kaustophilus}
Length = 244
Score = 154 bits (391), Expect = 2e-38
Identities = 59/253 (23%), Positives = 105/253 (41%), Gaps = 35/253 (13%)
Query: 16 YSGKVRENYFLSDGTR-ITIATDRLSAFD-QNIACIPYKGEVLNQITQYWFHH-TSDICS 72
Y GK ++ Y + D +AF+ + A I KG + N+I+ F +
Sbjct: 11 YEGKAKKIYATDEPDVLWVEYKDSATAFNGEKKATIAGKGRLNNEISSLLFLKLREAGIA 70
Query: 73 NHTLDYPDPNVLVGQQLQMFPIELIVRGYLAGNTKTSLLTFYKNGKRKIYEYLLPDNMSD 132
NH ++ P + +++ + P+E++VR +AG SL + +
Sbjct: 71 NHFIEKLSPTEQLVRRVTIIPLEVVVRNVVAG----SLAKRI--------------GLEE 112
Query: 133 NQKLPYPVITPTTKSSESASGCDQPISPNEIIHRGILTRNQWETISSYALSLFERGCKLA 192
L P++ K+ + D + + I + +R + + AL++ +
Sbjct: 113 GTPLEAPLVEFYYKNDD---LGDPLLLEDHIFILKLASREEVAALKQAALAVNDVLRLHF 169
Query: 193 LENGLILVDSKYEFGIDKKQNIILADEIHTPDSSRYWEVETYEKSFREGITPIGLDKDFI 252
E + L+D K EFG I+LADEI +PD+ R W+ +T EK LDKD
Sbjct: 170 AERNVRLIDFKLEFGRTADGAILLADEI-SPDTCRLWDAKTNEK----------LDKDVF 218
Query: 253 RNWILTRCNPYRD 265
R + + + Y
Sbjct: 219 RRDLGSLTDAYEV 231
>1kut_A Phosphoribosylaminoimidazole-succinocarboxamide synthase;
structural genomics, saicar synthetase, PSI, protein
structure initiative; 2.20A {Thermotoga maritima} SCOP:
d.143.1.1
Length = 230
Score = 154 bits (391), Expect = 2e-38
Identities = 58/252 (23%), Positives = 95/252 (37%), Gaps = 37/252 (14%)
Query: 16 YSGKVRENYFLSDGTRITIATDRLSAFD-QNIACIPYKGEVLNQITQYWFHHTSDI-CSN 73
Y GK + D + D ++A D + KG + + T + S+
Sbjct: 3 YEGKTKIVKVTGDYALL-EFKDDITAGDGLKHDVLTGKGSICAETTAILMKYLSEKGIKT 61
Query: 74 HTLDYPDPNVLVGQQLQMFPIELIVRGYLAGNTKTSLLTFYKNGKRKIYEYLLPDNMSDN 133
H ++Y P L L+MFP+E++VR AG+ + Y + +
Sbjct: 62 HLVEYIPPRTLKVIPLKMFPLEVVVRLKKAGS----FVRRYGGAEGEDL----------- 106
Query: 134 QKLPYPVITPTTKSSESASGCDQPISPNEIIHRGILTRNQWETISSYALSLFERGCKLAL 193
P P++ K D + + + GI T+ Q E + A+ + +
Sbjct: 107 ---PVPLVEFFIKD---DERHDPMVCVDHLEILGIATKKQAEKMKEAAVKITLALKEFFE 160
Query: 194 ENGLILVDSKYEFGIDKKQNIILADEIHTPDSSRYWEVETYEKSFREGITPIGLDKDFIR 253
L D KYEFG+DK N++L DEI +PD+ R + DKD R
Sbjct: 161 RANFELWDIKYEFGLDKDGNVVLGDEI-SPDTFRLRK------------KGEIFDKDVYR 207
Query: 254 NWILTRCNPYRD 265
+ YR+
Sbjct: 208 RDLGDPLKKYRE 219
>3kre_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; ssgcid,
NIH, niaid, SBRI, UW, emerald biostructures,
ATP-binding, ligase; 1.80A {Ehrlichia chaffeensis str}
Length = 263
Score = 148 bits (375), Expect = 1e-36
Identities = 61/267 (22%), Positives = 109/267 (40%), Gaps = 44/267 (16%)
Query: 16 YSGKVRENYFLSD-GTRITIATDRLSAFD-QNIACIPYKGEVLNQITQYWFHHTSDI-CS 72
Y GK + + + I D ++AF+ + A I KG + N I+ + D
Sbjct: 29 YEGKAKIIFATLNPLEVIQHFKDEITAFNNKKAAIIHEKGILNNYISSFLMKKLIDKGIK 88
Query: 73 NHTLDYPDPNVLVGQQLQMFPIELIVRGYLAGNTKTSLLTFYKNGKRKIYEYLLPDNMSD 132
H + + + +++ + PIE+++R AGN ++ ++ + +
Sbjct: 89 THFISLLNQREQLVKKITIIPIEVVIRNLAAGNF----SKRFQIADGTPFKSPIIEFYYK 144
Query: 133 NQKLPYPVITPTTKSSESASGCDQPISPNEIIHRGILTRNQWETISSYALSLFERGCKLA 192
N +L D +S I+ LT + E I +L + +L
Sbjct: 145 NDELS-----------------DPMVSEGHILSFQWLTNQELEKIKILSLKINNILSELF 187
Query: 193 LENGLILVDSKYEFGI---DKKQNIILADEIHTPDSSRYWEVETYEKSFREGITPIGLDK 249
G+ LVD K EFG D++ ++ LADEI +PD+ R W++ T ++ LDK
Sbjct: 188 FNVGIKLVDFKLEFGKLHNDEQSDLFLADEI-SPDTCRLWDISTNKR----------LDK 236
Query: 250 DFIRNWILTRCNPYRD------NIPDI 270
D R + YR+ IP++
Sbjct: 237 DRYRLNLGNVIEGYREVAHKLNAIPNL 263
>2gqr_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; PURC,
ADE2, ADE1, nucleotide complex, octahedral magnesium
coordination; HET: ADP; 2.00A {Escherichia coli} PDB:
2gqs_A*
Length = 237
Score = 136 bits (343), Expect = 6e-33
Identities = 55/253 (21%), Positives = 86/253 (33%), Gaps = 36/253 (14%)
Query: 16 YSGKVRENYFLSDGTR-ITIATDRLSAFD-QNIACIPYKGEVLNQITQYWFHHTSDI-CS 72
Y GK + Y + + + SA D I KG V N+ + ++
Sbjct: 8 YRGKAKTVYSTENPDLLVLEFRNDTSAGDGARIEQFDRKGMVNNKFNYFIMSKLAEAGIP 67
Query: 73 NHTLDYPDPNVLVGQQLQMFPIELIVRGYLAGNTKTSLLTFYKNGKRKIYEYLLPDNMSD 132
+ ++L M P+E +VR AG+ L L N +
Sbjct: 68 TQMERLLSDTECLVKKLDMVPVECVVRNRAAGSLVKRLGIEEGIELNPPLFDLFLKNDA- 126
Query: 133 NQKLPYPVITPTTKSSESASGCDQPISPNEIIHRGILTRNQWETISSYALSLFERGCKLA 192
D ++ + G +++ + + KL
Sbjct: 127 --------------------MHDPMVNESYCETFGWVSKENLARMKELTYKANDVLKKLF 166
Query: 193 LENGLILVDSKYEFGIDKKQNIILADEIHTPDSSRYWEVETYEKSFREGITPIGLDKDFI 252
+ GLILVD K EFG+ K ++L DE +PD SR W+ ET EK +DKD
Sbjct: 167 DDAGLILVDFKLEFGLY-KGEVVLGDEF-SPDGSRLWDKETLEK----------MDKDRF 214
Query: 253 RNWILTRCNPYRD 265
R + Y
Sbjct: 215 RQSLGGLIEAYEA 227
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl reductase,
beta-ketoacyl synthase, dehydratase; 4.00A
{Saccharomyces cerevisiae}
Length = 2006
Score = 48.8 bits (116), Expect = 2e-06
Identities = 70/389 (17%), Positives = 109/389 (28%), Gaps = 166/389 (42%)
Query: 8 YIPELPNYYSGKVRENY-----FLSDGTRITIATDRLSAFDQNI--ACIPY-KG-EVLNQ 58
Y EL R+ Y + D I + + LS + A + +G +L
Sbjct: 169 YFEEL--------RDLYQTYHVLVGD--LIKFSAETLSELIRTTLDAEKVFTQGLNILE- 217
Query: 59 ITQYWFHH---TSDICSNHTLDY--------PDPNVLVG-QQLQMF----------PIEL 96
W + T D DY P L+G QL + P EL
Sbjct: 218 ----WLENPSNTPDK------DYLLSIPISCP----LIGVIQLAHYVVTAKLLGFTPGEL 263
Query: 97 IVRGYLAGNTKTS--LLT------------FYKNGKRKIYEYLLPDNMSDNQKLPYPVIT 142
R YL G T S L+T F+ + ++ I L + + P +
Sbjct: 264 --RSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAI-TVLFFIGVRCYEAYPNTSLP 320
Query: 143 PTTKSSESASGCDQPISPNEIIHRGILTRNQWETI---------SSYALSLFERGCKLAL 193
P+ + P SP I LT+ Q + + + + +L
Sbjct: 321 PSILEDSLENNEGVP-SPMLSI-SN-LTQEQVQDYVNKTNSHLPAGKQVEI-------SL 370
Query: 194 ENG-----------------LILVDSKYEFGIDKKQNIILADEIHTPDSSRYWEVETYEK 236
NG L L +K G+D Q+ I P S R +
Sbjct: 371 VNGAKNLVVSGPPQSLYGLNLTLRKAKAPSGLD--QSRI-------PFSERKLKFSN--- 418
Query: 237 SFREGITPIGLDKDFIRNWILTRCNPY--------RDNI-PDI-PENIILRTSQTYIAAY 286
F P+ P+ D I D+ N+ I Y
Sbjct: 419 RF----LPVAS--------------PFHSHLLVPASDLINKDLVKNNVSFNAKDIQIPVY 460
Query: 287 EKITGLKFIADNSELPPLERIRNNLRKYT 315
+ G ++LR +
Sbjct: 461 DTFDG-----------------SDLRVLS 472
Score = 43.0 bits (101), Expect = 9e-05
Identities = 26/177 (14%), Positives = 52/177 (29%), Gaps = 60/177 (33%)
Query: 122 YEYLLPDNMSDN---------QKLPYPVITPTTKSSESASGCDQPISPNEIIHR--G-IL 169
+ L+P + LP P +E + D+P +P E++ + G +
Sbjct: 18 HVLLVPTASFFIASQLQEQFNKILPEP--------TEGFAADDEPTTPAELVGKFLGYVS 69
Query: 170 TRNQWETISSYALSLFERGCKLALENGLILVDSKYEFGIDKKQNIILADEIHT-----PD 224
+ + + + L L L EF + + ++IH
Sbjct: 70 SLVEPSKVGQFDQVL-----NLCLT----------EF----ENCYLEGNDIHALAAKLLQ 110
Query: 225 SSRYWEVETYEKSFREGITPIGLDKDFIRNWILTRCNPYRDNIPDIPENIILRTSQT 281
+ T + K+ I+N+I R R + + R
Sbjct: 111 END---------------TTLVKTKELIKNYITARIMAKR-PFDKKSNSALFRAVGE 151
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 32.7 bits (73), Expect = 0.11
Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
Query: 285 AYEKI-TGLKFIADNSELPPLERIRNNL 311
A +K+ LK AD+S P L I+ +
Sbjct: 21 ALKKLQASLKLYADDSA-PALA-IKATM 46
>3ffz_A Botulinum neurotoxin type E; botulinum neurotoxin serotype E,
botulism, domain organization, endopeptidase,
translocation, hydrolase; 2.65A {Clostridium botulinum}
Length = 1252
Score = 28.7 bits (64), Expect = 1.7
Identities = 27/182 (14%), Positives = 55/182 (30%), Gaps = 9/182 (4%)
Query: 102 LAGNTKTSLLTFYKNGKRKIY----EYLLPDNMSDNQKLPYPVITPTTKSSESASGCDQP 157
L T+ L T ++ R+ Y +Y N+ ++ Y + ++ + Q
Sbjct: 331 LYSFTEFDLATKFQVKCRQTYIGQYKYFKLSNLLNDSI--YNISEGYNINNLKVNFRGQN 388
Query: 158 ISPNEIIHRGILTRNQWETISSYALSLFERGCKLALENGLILVDSKYEFGIDKKQNIILA 217
+ N I I R + I + ++ + + + + E +N
Sbjct: 389 ANLNPRIITPITGRGLVKKIIRFCKNIVSVK---GIRKSICIEINNGELFFVASENSYND 445
Query: 218 DEIHTPDSSRYWEVETYEKSFREGITPIGLDKDFIRNWILTRCNPYRDNIPDIPENIILR 277
D I+TP + + + + N N IP+
Sbjct: 446 DNINTPKEIDDTVTSNNNYENDLDQVILNFNSESAPGLSDEKLNLTIQNDAYIPKYDSNG 505
Query: 278 TS 279
TS
Sbjct: 506 TS 507
>1rut_X Flinc4, fusion protein of LMO4 protein and LIM domain- binding
protein 1; B-tandem zipper, protein binding; 1.30A {Mus
musculus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB:
2dfy_X
Length = 188
Score = 26.7 bits (58), Expect = 8.1
Identities = 12/90 (13%), Positives = 28/90 (31%), Gaps = 8/90 (8%)
Query: 147 SSESASGCDQPISPNEII-------HRGILT-RNQWETISSYALSLFERGCKLALENGLI 198
S + +GC I+ ++ H L + + S + + + N I
Sbjct: 4 SWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSSCQAQLGDIGTSSYTKSGMILCRNDYI 63
Query: 199 LVDSKYEFGIDKKQNIILADEIHTPDSSRY 228
+ Q+I ++ + + Y
Sbjct: 64 RLFGNSGACSACGQSIPASELVMRAQGNVY 93
Database: pdb70
Posted date: Jan 26, 2011 11:21 AM
Number of letters in database: 5,693,230
Number of sequences in database: 24,244
Lambda K H
0.319 0.137 0.413
Gapped
Lambda K H
0.267 0.0544 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24244
Number of Hits to DB: 2,915,018
Number of extensions: 134862
Number of successful extensions: 364
Number of sequences better than 10.0: 1
Number of HSP's gapped: 320
Number of HSP's successfully gapped: 15
Length of query: 323
Length of database: 5,693,230
Length adjustment: 93
Effective length of query: 230
Effective length of database: 3,438,538
Effective search space: 790863740
Effective search space used: 790863740
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.2 bits)