HHsearch results for GI: 254780495 and protein with PDBid: 3js4_A

>3js4_A Superoxide dismutase; niaid, ssgcid, seattle structural genomics center for infectious disease, GRAM-negative bacteria; 1.95A {Anaplasma phagocytophilum HZ}
Probab=100.00  E-value=0  Score=489.90  Aligned_cols=196  Identities=42%  Similarity=0.816  Sum_probs=176.4

Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH---HHHHHHHHHH---HCCCHHHHHHHHHH
Q ss_conf             98779999998655586469999999873288789988999850002332---0045789764---10111455433222
Q gi|254780495|r    1 MDFKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLH---LSLEEIIIKS---HGSNAGLFNNASQY   74 (205)
Q Consensus         1 m~~~Lp~Lpy~~~aLeP~IS~~tl~~Hy~kHh~~YV~~lN~~~~~~~~~~---~~l~~~~~~~---~~~~~~~~nnagg~   74 (205)
                      |.|+||||||  +||||+||++||++||+|||||||++||+++++++.++   .++.+++.+.   ....+.+|||+||+
T Consensus        21 ~~f~Lp~LpY--daLeP~IS~~tl~~Hh~kHhkgYV~~LN~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ifnnag~~   98 (227)
T 3js4_A           21 SMFELSDLPY--EGLEPYISSHLLDRHYNGHHKTYVDVLNKLVVGTEFEGLGNESLGDIVVKAHNSGSAGRAIFNNAAQI   98 (227)
T ss_dssp             CCCCCCCCSS--SCBTTTBCHHHHHHHHHTHHHHHHHHHHHHTTTSTTTTCCGGGHHHHHHHHHHTGGGGHHHHHHHHHH
T ss_pred             CCCCCCCCCC--CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf             8476999591--20300059999999999899999999999997425454312316666666502512569998647899


Q ss_pred             HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECC--CCEEEEEECCCCCCCCC-C
Q ss_conf             56899985078888876406899999974308999999999998620143431001034--10123443147675400-1
Q gi|254780495|r   75 YNHNLFWACMKKNDGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVK--NGKLEISKTQNAENPLI-N  151 (205)
Q Consensus        75 ~nH~lff~~l~p~~~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~--~~~L~i~~~~n~~~p~~-~  151 (205)
                      +||+|||++|+|+ +++.|++.|+++|+++|||+|+|+++|+++|+++|||||||||++  +++|.|+++.||++|++ .
T Consensus        99 ~NH~~fw~~l~P~-~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~~~fGsGW~wLv~~~~~~~l~i~~~~n~~~p~~~~  177 (227)
T 3js4_A           99 WNHDFYWQSMKPN-GGGNPPEKLREMIEHSFGSVEGFNNAFTTSGLGQFGSGWVWLVYDEDAKALKVVSTANADSPLLTQ  177 (227)
T ss_dssp             HHHHHHHHTBCTT-CCSSCCHHHHHHHHHHHSSHHHHHHHHHHHHHHSCSSEEEEEEEETTTTEEEEEEEETTCCGGGST
T ss_pred             HHHHHHHCCCCCC-CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCC
T ss_conf             9999997165889-999888999999998737699999999999973777852788881788723666420688976565


Q ss_pred             CCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf             478535643768776987517749999999861359899999999999
Q gi|254780495|r  152 GAIPILGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETAM  199 (205)
Q Consensus       152 ~~~PlL~iDvWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~~~a~  199 (205)
                      +.+|||||||||||||+||+|+|++||++||+|+|||++||+||++|-
T Consensus       178 ~~~PlL~lDvWEHAYyldY~n~r~~Yi~~f~~n~InW~~V~~r~~~Ag  225 (227)
T 3js4_A          178 GQLPLATMDVWEHAYYLDYLNLRKKYIDVFLEHLLNWDFVLGRLEDAG  225 (227)
T ss_dssp             TEEEEEEEECSGGGTHHHHTTCHHHHHHHHHHHTBCHHHHHHHHHHTT
T ss_pred             CCEEEEEEEEHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCC
T ss_conf             998689872078653654266879999999986749999999999722