HHsearch results for GI: 254780495 and protein with PDBid: 3js4_A
>3js4_A Superoxide dismutase; niaid, ssgcid, seattle structural genomics center for infectious disease, GRAM-negative bacteria; 1.95A {Anaplasma phagocytophilum HZ}
Probab=100.00 E-value=0 Score=489.90 Aligned_cols=196 Identities=42% Similarity=0.816 Sum_probs=176.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH---HHHHHHHHHH---HCCCHHHHHHHHHH
Q ss_conf 98779999998655586469999999873288789988999850002332---0045789764---10111455433222
Q gi|254780495|r 1 MDFKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLH---LSLEEIIIKS---HGSNAGLFNNASQY 74 (205)
Q Consensus 1 m~~~Lp~Lpy~~~aLeP~IS~~tl~~Hy~kHh~~YV~~lN~~~~~~~~~~---~~l~~~~~~~---~~~~~~~~nnagg~ 74 (205)
|.|+|||||| +||||+||++||++||+|||||||++||+++++++.++ .++.+++.+. ....+.+|||+||+
T Consensus 21 ~~f~Lp~LpY--daLeP~IS~~tl~~Hh~kHhkgYV~~LN~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ifnnag~~ 98 (227)
T 3js4_A 21 SMFELSDLPY--EGLEPYISSHLLDRHYNGHHKTYVDVLNKLVVGTEFEGLGNESLGDIVVKAHNSGSAGRAIFNNAAQI 98 (227)
T ss_dssp CCCCCCCCSS--SCBTTTBCHHHHHHHHHTHHHHHHHHHHHHTTTSTTTTCCGGGHHHHHHHHHHTGGGGHHHHHHHHHH
T ss_pred CCCCCCCCCC--CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 8476999591--20300059999999999899999999999997425454312316666666502512569998647899
Q ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECC--CCEEEEEECCCCCCCCC-C
Q ss_conf 56899985078888876406899999974308999999999998620143431001034--10123443147675400-1
Q gi|254780495|r 75 YNHNLFWACMKKNDGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVK--NGKLEISKTQNAENPLI-N 151 (205)
Q Consensus 75 ~nH~lff~~l~p~~~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~--~~~L~i~~~~n~~~p~~-~ 151 (205)
+||+|||++|+|+ +++.|++.|+++|+++|||+|+|+++|+++|+++|||||||||++ +++|.|+++.||++|++ .
T Consensus 99 ~NH~~fw~~l~P~-~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~~~fGsGW~wLv~~~~~~~l~i~~~~n~~~p~~~~ 177 (227)
T 3js4_A 99 WNHDFYWQSMKPN-GGGNPPEKLREMIEHSFGSVEGFNNAFTTSGLGQFGSGWVWLVYDEDAKALKVVSTANADSPLLTQ 177 (227)
T ss_dssp HHHHHHHHTBCTT-CCSSCCHHHHHHHHHHHSSHHHHHHHHHHHHHHSCSSEEEEEEEETTTTEEEEEEEETTCCGGGST
T ss_pred HHHHHHHCCCCCC-CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCC
T ss_conf 9999997165889-999888999999998737699999999999973777852788881788723666420688976565
Q ss_pred CCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 478535643768776987517749999999861359899999999999
Q gi|254780495|r 152 GAIPILGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETAM 199 (205)
Q Consensus 152 ~~~PlL~iDvWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~~~a~ 199 (205)
+.+|||||||||||||+||+|+|++||++||+|+|||++||+||++|-
T Consensus 178 ~~~PlL~lDvWEHAYyldY~n~r~~Yi~~f~~n~InW~~V~~r~~~Ag 225 (227)
T 3js4_A 178 GQLPLATMDVWEHAYYLDYLNLRKKYIDVFLEHLLNWDFVLGRLEDAG 225 (227)
T ss_dssp TEEEEEEEECSGGGTHHHHTTCHHHHHHHHHHHTBCHHHHHHHHHHTT
T ss_pred CCEEEEEEEEHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCC
T ss_conf 998689872078653654266879999999986749999999999722