PSIBLAST alignment of GI: 254780495 and protein with PDB id: 1msd
gi|443133|pdb|1MSD|A Chain A, Comparison Of The Crystal Structures Of Genetically Engineered Human Manganese Superoxide Dismutase And Manganese Superoxide Dismutase From Thermus Thermophilus. Differences In Dimer-Dimer Interactions. Length = 198
>gi|443134|pdb|1MSD|B Chain B, Comparison Of The Crystal Structures Of Genetically Engineered Human Manganese Superoxide Dismutase And Manganese Superoxide Dismutase From Thermus Thermophilus. Differences In Dimer-Dimer Interactions. Length = 198
Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 71/201 (35%), Positives = 100/201 (49%), Gaps = 7/201 (3%)
Query: 3 FKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKSHG 62
LP+LPY Y L P+++ + ++ HH HH Y +N + +
Sbjct: 2 HSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKG--DVTAQIA 59
Query: 63 SNAGLFNNASQYYNHNLFWACMKKNDGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQ 122
L N + NH++FW + N G L +AI +FGSF+KFK L A+
Sbjct: 60 LQPALKFNGGGHINHSIFWTNLSPNGGGEP-KGELLEAIKRDFGSFDKFKEKLTAASVGV 118
Query: 123 FGSGWGWLSVKNGK--LEISKTQNAENPL-INGAIPILGIDVWEHAYYLDFKYRRAHYIE 179
GSGWGWL + L+I+ N + G IP+LGIDVWEHAYYL +K R Y++
Sbjct: 119 QGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLK 178
Query: 180 SFITNLVNWEYVCERYETAML 200
+ I N++NWE V ERY
Sbjct: 179 A-IWNVINWENVTERYMACKK 198