RPSBLAST alignment of GI: 254780495 and protein with PDBid: 1coj
>1coj_A Protein (superoxide dismutase); oxidoreductase; 1.90A {Aquifex pyrophilus} SCOP: a.2.11.1 d.44.1.1 Length = 212
Score = 149 bits (376), Expect = 5e-37
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 6/206 (2%)
Query: 3 FKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKSHG 62
KL + +S E +E H + H+K Y ++ + + +++
Sbjct: 3 HKLEPKDHLKPQNLEGISNEQIEPHFEAHYKGYVAKYNEIQEKLADQNFADRSKANQNYS 62
Query: 63 S----NAGLFNNASQYYNHNLFWACMKKNDGKGKVPQALSDAIDDNFGSFEKFKSDLITA 118
N H L++ + KG+ +AL I+++ G + ++L A
Sbjct: 63 EYRELKVEETFNYMGVVLHELYFGMLTPGG-KGEPSEALKKKIEEDIGGLDACTNELKAA 121
Query: 119 ASTQFGSGWGWLSVKNGKLEISKTQNAENPLINGAIPILGIDVWEHAYYLDFKYRRAHYI 178
A G L + +G+L ++ + G IP++ ID +EHAYY+D+K +R YI
Sbjct: 122 AMAFRGWAILGLDIFSGRLVVNGLDAHNVYNLTGLIPLIVIDTYEHAYYVDYKNKRPPYI 181
Query: 179 ESFITNLVNWEYVCERYETAMLAQKV 204
++F +NW+ V ER+E AM A +
Sbjct: 182 DAFF-KNINWDVVNERFEKAMKAYEA 206