RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|254780495|ref|YP_003064908.1| superoxide dismutase [Candidatus Liberibacter asiaticus str. psy62] (205 letters) >d1my6a2 d.44.1.1 (A:89-198) Fe superoxide dismutase (FeSOD) {Thermosynechococcus elongatus [TaxId: 146786]} Length = 110 Score = 117 bits (294), Expect = 8e-28 Identities = 52/108 (48%), Positives = 78/108 (72%) Query: 89 GKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVKNGKLEISKTQNAENP 148 G G ++ I+ FGS+++FK+ AA+TQFGSGW WL ++ G L+++KT NAENP Sbjct: 2 GGGVPTGDVAARINSAFGSYDEFKAQFKNAAATQFGSGWAWLVLEAGTLKVTKTANAENP 61 Query: 149 LINGAIPILGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYE 196 L++G +P+L IDVWEHAYYLD++ RR +I++F+ LVNW++V + Sbjct: 62 LVHGQVPLLTIDVWEHAYYLDYQNRRPDFIDNFLNQLVNWDFVAKNLA 109 >d1unfx2 d.44.1.1 (X:105-238) Fe superoxide dismutase (FeSOD) {Cowpea (Vigna unguiculata) [TaxId: 3917]} Length = 134 Score = 117 bits (293), Expect = 8e-28 Identities = 58/128 (45%), Positives = 74/128 (57%), Gaps = 18/128 (14%) Query: 89 GKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSV---------------- 132 G GK L + I+ +FGSFEKF + AA+TQFGSGW WL+ Sbjct: 2 GGGKPSGELLELIERDFGSFEKFLDEFKAAAATQFGSGWAWLAYKASKLDGENAANPPSA 61 Query: 133 -KNGKLEISKTQNAENPLI-NGAIPILGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEY 190 ++ KL + K+ NA NPL+ G P+L IDVWEHAYYLDF+ RR YI F+ LV+W+ Sbjct: 62 DEDNKLVVIKSPNAVNPLVWGGYYPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWDA 121 Query: 191 VCERYETA 198 V R E A Sbjct: 122 VSSRLEQA 129 >d1jr9a2 d.44.1.1 (A:92-202) Mn superoxide dismutase (MnSOD) {Bacillus halodenitrificans [TaxId: 1482]} Length = 111 Score = 116 bits (291), Expect = 2e-27 Identities = 55/111 (49%), Positives = 76/111 (68%), Gaps = 1/111 (0%) Query: 88 DGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVKNGKLEISKTQNAEN 147 +G GK ++D I+D +GSFEKF+ + AA+ +FGSGW WL V NG++EI T +N Sbjct: 1 NGGGKPTGEVADKINDKYGSFEKFQEEFAAAAAGRFGSGWAWLVVNNGEIEIMSTPIQDN 60 Query: 148 PLINGAIPILGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETA 198 PL+ G PILG+DVWEHAYYL ++ +R YI +F N+VNW+ V +Y A Sbjct: 61 PLMEGKKPILGLDVWEHAYYLKYQNKRPDYISAFW-NVVNWDEVAAQYSQA 110 >d1ma1a2 d.44.1.1 (A:92-204) Fe superoxide dismutase (FeSOD) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Length = 113 Score = 114 bits (287), Expect = 5e-27 Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 3/114 (2%) Query: 88 DGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSV--KNGKLEISKTQNA 145 + G+ L++ I+ +FGSFE+F+ + AA + GSGW L+ + +L I + + Sbjct: 1 ECGGEPSGKLAEYIEKDFGSFERFRKEFSQAAISAEGSGWAVLTYCQRTDRLFIMQVEKH 60 Query: 146 ENPLINGAIPILGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETAM 199 +I +L +DVWEHAYY+D++ R Y+E+F N+VNW+ V +R+E + Sbjct: 61 NVNVIPHFRILLVLDVWEHAYYIDYRNVRPDYVEAFW-NIVNWKEVEKRFEDIL 113 >d1gv3a2 d.44.1.1 (A:127-237) Mn superoxide dismutase (MnSOD) {Anabaena sp. [TaxId: 1167]} Length = 111 Score = 112 bits (282), Expect = 2e-26 Identities = 46/112 (41%), Positives = 69/112 (61%), Gaps = 2/112 (1%) Query: 88 DGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSV-KNGKLEISKTQNAE 146 DG G+ ++ I+ FGSFE+FK A +FGSGW WL G+L++ T N + Sbjct: 1 DGGGQPTGDIAQEINQTFGSFEEFKKQFNQAGGDRFGSGWVWLVRNPQGQLQVVSTPNQD 60 Query: 147 NPLINGAIPILGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETA 198 NP++ G+ PI+G DVWEHAYYL ++ RR Y+ ++ N+VNW + R + + Sbjct: 61 NPIMEGSYPIMGNDVWEHAYYLRYQNRRPEYLNNWW-NVVNWSEINRRTQAS 111 >d1coja2 d.44.1.1 (A:91-212) Fe superoxide dismutase (FeSOD) {Aquifex pyrophilus [TaxId: 2714]} Length = 122 Score = 112 bits (282), Expect = 2e-26 Identities = 39/116 (33%), Positives = 65/116 (56%), Gaps = 1/116 (0%) Query: 89 GKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVKNGKLEISKTQNAENP 148 GKG+ +AL I+++ G + ++L AA G L + +G+L ++ Sbjct: 2 GKGEPSEALKKKIEEDIGGLDACTNELKAAAMAFRGWAILGLDIFSGRLVVNGLDAHNVY 61 Query: 149 LINGAIPILGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETAMLAQKV 204 + G IP++ ID +EHAYY+D+K +R YI++F +NW+ V ER+E AM A + Sbjct: 62 NLTGLIPLIVIDTYEHAYYVDYKNKRPPYIDAFF-KNINWDVVNERFEKAMKAYEA 116 >d1wb8a2 d.44.1.1 (A:93-208) Fe superoxide dismutase (FeSOD) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 116 Score = 112 bits (280), Expect = 3e-26 Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 3/116 (2%) Query: 86 KNDGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSV--KNGKLEISKTQ 143 G GK AL+D I+ +GSF++FK A++ G+GW L ++G L+I + Sbjct: 2 SGKGGGKPGGALADLINKQYGSFDRFKQVFTETANSLPGTGWAVLYYDTESGNLQIMTFE 61 Query: 144 NAENPLINGAIPILGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETAM 199 N I IL +D +EHAYYL +K +RA Y+ ++ N+VNW+ ++ + + Sbjct: 62 NHFQNHIAEIPIILILDEFEHAYYLQYKNKRADYVNAWW-NVVNWDAAEKKLQKYL 116 >d1kkca2 d.44.1.1 (A:98-213) Mn superoxide dismutase (MnSOD) {Aspergillus fumigatus [TaxId: 5085]} Length = 116 Score = 109 bits (273), Expect = 2e-25 Identities = 43/115 (37%), Positives = 60/115 (52%), Gaps = 3/115 (2%) Query: 86 KNDGKGKVPQA--LSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVKNGKLEISKTQ 143 + G GK+ QA L AI+ +GSF+KFK T GSGWGWL K ++ T Sbjct: 1 EKSGGGKIDQAPVLKAAIEQRWGSFDKFKDAFNTTLLGIQGSGWGWLVTDGPKGKLDITT 60 Query: 144 NAENPLINGAIPILGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETA 198 + + GA P+ G+D+WEHAYYL + +A Y + N++NW RY Sbjct: 61 THDQDPVTGAAPVFGVDMWEHAYYLQYLNDKASYAKGIW-NVINWAEAENRYIAG 114 >d1bsma2 d.44.1.1 (A:87-201) Cambialistic superoxide dismutase {Propionibacterium shermanii [TaxId: 1752]} Length = 115 Score = 109 bits (273), Expect = 2e-25 Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 3/108 (2%) Query: 96 ALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSV--KNGKLEISKTQNAENPLINGA 153 L AID+ FGSF+ K+ AA+ GSGW L ++ + + +N L G+ Sbjct: 9 ELGAAIDEFFGSFDNMKAQFTAAATGIQGSGWASLVWDPLGKRINTLQFYDHQNNLPAGS 68 Query: 154 IPILGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETAMLA 201 IP+L +D+WEHA+YL +K + Y++S+ N+VNW+ V R+ A +A Sbjct: 69 IPLLQLDMWEHAFYLQYKNVKGDYVKSWW-NVVNWDDVALRFSEARVA 115 >d1mnga2 d.44.1.1 (A:93-203) Mn superoxide dismutase (MnSOD) {Thermus thermophilus [TaxId: 274]} Length = 111 Score = 108 bits (272), Expect = 2e-25 Identities = 51/112 (45%), Positives = 69/112 (61%), Gaps = 3/112 (2%) Query: 89 GKGKVPQ-ALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVKN-GKLEISKTQNAE 146 G K P L AID+ FG F+ K L AA +FGSGW WL GKL + T N + Sbjct: 1 GGAKEPVGELKKAIDEQFGGFQALKEKLTQAAMGRFGSGWAWLVKDPFGKLHVLSTPNQD 60 Query: 147 NPLINGAIPILGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETA 198 NP++ G PI+GIDVWEHAYYL ++ RRA Y+++ N++NW+ E ++ A Sbjct: 61 NPVMEGFTPIVGIDVWEHAYYLKYQNRRADYLQAIW-NVLNWDVAEEFFKKA 111 >d1y67a2 d.44.1.1 (A:98-213) Mn superoxide dismutase (MnSOD) {Deinococcus radiodurans [TaxId: 1299]} Length = 116 Score = 108 bits (271), Expect = 3e-25 Identities = 58/111 (52%), Positives = 75/111 (67%), Gaps = 7/111 (6%) Query: 96 ALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVKNGKLEISKTQNAENPLINGAI- 154 L DAI+ FGSF+ FK AA T+FGSGW WL VK+GKL++ T N +NPL+ AI Sbjct: 6 ELLDAINSAFGSFDAFKQKFEDAAKTRFGSGWAWLVVKDGKLDVVSTANQDNPLMGEAIA 65 Query: 155 -----PILGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETAML 200 PILG+DVWEHAYYL+++ RR Y+ +F N+VNW+ V +RY A L Sbjct: 66 GVSGTPILGVDVWEHAYYLNYQNRRPDYLAAFW-NVVNWDEVSKRYAAAKL 115 >d1ix9a2 d.44.1.1 (A:91-205) Mn superoxide dismutase (MnSOD) {Escherichia coli [TaxId: 562]} Length = 115 Score = 108 bits (271), Expect = 4e-25 Identities = 46/114 (40%), Positives = 68/114 (59%), Gaps = 7/114 (6%) Query: 91 GKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVKNGKLEISKTQNAENPLI 150 + L AI+ +FGS + FK++ AA+++FGSGW WL +K KL + T N ++PL+ Sbjct: 2 TTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKGDKLAVVSTANQDSPLM 61 Query: 151 N------GAIPILGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETA 198 PI+G+DVWEHAY+L F+ RR YI+ F N+VNW+ R+ Sbjct: 62 GEAISGASGFPIMGLDVWEHAYFLKFQNRRPDYIKEFW-NVVNWDEAAARFAAK 114 >d1p7ga2 d.44.1.1 (A:104-222) Fe superoxide dismutase (FeSOD) {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Length = 119 Score = 107 bits (267), Expect = 9e-25 Identities = 42/114 (36%), Positives = 61/114 (53%), Gaps = 3/114 (2%) Query: 91 GKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVK--NGKLEISKTQNAENP 148 GK ++D I+ FGSFEKFK + AA G GW L + +L I + + Sbjct: 2 GKPGGKIADLINKFFGSFEKFKEEFSQAAKNVEGVGWAILVYEPLEEQLLILQIEKHNLM 61 Query: 149 LINGAIPILGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETAMLAQ 202 A +L +DVWEHAYYL +K R Y++++ N+VNW+ V R + A+ Q Sbjct: 62 HAADAQVLLALDVWEHAYYLQYKNDRGSYVDNWW-NVVNWDDVERRLQKALNGQ 114 >d1dt0a2 d.44.1.1 (A:84-197) Fe superoxide dismutase (FeSOD) {Pseudomonas ovalis [TaxId: 303]} Length = 114 Score = 106 bits (265), Expect = 2e-24 Identities = 52/109 (47%), Positives = 70/109 (64%), Gaps = 2/109 (1%) Query: 91 GKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVK-NGKLEISKTQNAENPL 149 G+ AL+DAI+ FGSF+KFK + + FGSGWGWL K +G L ++ T A PL Sbjct: 3 GQPTGALADAINAAFGSFDKFKEEFTKTSVGTFGSGWGWLVKKADGSLALASTIGAGCPL 62 Query: 150 INGAIPILGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETA 198 G P+L DVWEHAYY+D++ R Y+E+F NLVNW +V E++E Sbjct: 63 TIGDTPLLTCDVWEHAYYIDYRNLRPKYVEAFW-NLVNWAFVAEQFEGK 110 >d1uera2 d.44.1.1 (A:85-191) Cambialistic superoxide dismutase {Porphyromonas gingivalis [TaxId: 837]} Length = 107 Score = 105 bits (263), Expect = 3e-24 Identities = 56/108 (51%), Positives = 72/108 (66%), Gaps = 3/108 (2%) Query: 90 KGKVPQ-ALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSV-KNGKLEISKTQNAEN 147 KG P+ L +AID FGSFEKFK + TA +T FGSGW WL+ NGKL I K NA N Sbjct: 1 KGGAPKGKLGEAIDKQFGSFEKFKEEFNTAGTTLFGSGWVWLASDANGKLSIEKEPNAGN 60 Query: 148 PLINGAIPILGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERY 195 P+ G P+LG DVWEHAYYL ++ RRA +++ ++V+W+ V RY Sbjct: 61 PVRKGLNPLLGFDVWEHAYYLTYQNRRADHLKDLW-SIVDWDIVESRY 107 >d2p4ka2 d.44.1.1 (A:84-198) Mn superoxide dismutase (MnSOD) {Human (Homo sapiens) [TaxId: 9606]} Length = 115 Score = 103 bits (258), Expect = 1e-23 Identities = 47/114 (41%), Positives = 63/114 (55%), Gaps = 4/114 (3%) Query: 88 DGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVKNGKLEISKTQNAEN 147 +G G+ L +AI +FGSF+KFK L A+ GSGWGWL + + Sbjct: 1 NGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQ 60 Query: 148 PLIN---GAIPILGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETA 198 + G IP+LGIDVWEHAYYL +K R Y+++ N++NWE V ERY Sbjct: 61 DPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIW-NVINWENVTERYMAC 113 >d2nyba2 d.44.1.1 (A:83-192) Fe superoxide dismutase (FeSOD) {Escherichia coli [TaxId: 562]} Length = 110 Score = 103 bits (258), Expect = 1e-23 Identities = 48/110 (43%), Positives = 64/110 (58%), Gaps = 2/110 (1%) Query: 88 DGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVKNG-KLEISKTQNAE 146 + G+ +++AI +FGSF FK+ AA FGSGW WL + KL I T NA Sbjct: 1 NAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAG 60 Query: 147 NPLINGAIPILGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYE 196 PL A P+L +DVWEHAYY+D++ R Y+E F LVNWE+V + Sbjct: 61 TPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFW-ALVNWEFVAKNLA 109 >d1idsa2 d.44.1.1 (A:86-199) Fe superoxide dismutase (FeSOD) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 114 Score = 102 bits (254), Expect = 3e-23 Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 3/113 (2%) Query: 88 DGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLS--VKNGKLEISKTQNA 145 +G K L+ AI D FGSF+KF++ AA+T GSGW L KL I + + Sbjct: 1 NGGDKPTGELAAAIADAFGSFDKFRAQFHAAATTVQGSGWAALGWDTLGNKLLIFQVYDH 60 Query: 146 ENPLINGAIPILGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETA 198 + G +P+L +D+WEHA+YL +K + + ++F N+VNW V RY A Sbjct: 61 QTNFPLGIVPLLLLDMWEHAFYLQYKNVKVDFAKAFW-NVVNWADVQSRYAAA 112 >d1unfx1 a.2.11.1 (X:14-104) Fe superoxide dismutase (FeSOD) {Cowpea (Vigna unguiculata) [TaxId: 3917]} Length = 91 Score = 96.3 bits (239), Expect = 2e-21 Identities = 37/87 (42%), Positives = 50/87 (57%), Gaps = 2/87 (2%) Query: 1 MDFKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKS 60 F+L PY + L P MS++TLE+H HH+ Y +N K E+ SLEEII+ + Sbjct: 4 AKFELKPPPYPLNGLEPVMSQQTLEFHWGKHHRTYVENLKKQVVGTELDGKSLEEIIVTA 63 Query: 61 --HGSNAGLFNNASQYYNHNLFWACMK 85 G FNNA+Q +NH+ FW CMK Sbjct: 64 YNKGDILPAFNNAAQVWNHDFFWECMK 90 >d1uera1 a.2.11.1 (A:1-84) Cambialistic superoxide dismutase {Porphyromonas gingivalis [TaxId: 837]} Length = 84 Score = 95.8 bits (238), Expect = 2e-21 Identities = 38/85 (44%), Positives = 51/85 (60%), Gaps = 3/85 (3%) Query: 1 MDFKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKS 60 M +L +LPY+ D L+P +SKET+E+HH H K Y DN KL E + L I+ KS Sbjct: 1 MTHELISLPYAVDALAPVISKETVEFHHGKHLKTYVDNLNKLIIGTEFENADLNTIVQKS 60 Query: 61 HGSNAGLFNNASQYYNHNLFWACMK 85 G G+FNNA Q NHNL++ + Sbjct: 61 EG---GIFNNAGQTLNHNLYFTQFR 82 >d1ix9a1 a.2.11.1 (A:1-90) Mn superoxide dismutase (MnSOD) {Escherichia coli [TaxId: 562]} Length = 90 Score = 92.3 bits (229), Expect = 3e-20 Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 5/89 (5%) Query: 3 FKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALK-LASDAEMLHLSLEEIIIK-- 59 + LP+LPY+YD L P+ K+T+E HH HH+ Y +NA L S E +L +EE+I K Sbjct: 2 YTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELITKLD 61 Query: 60 --SHGSNAGLFNNASQYYNHNLFWACMKK 86 L NNA + NH+LFW +KK Sbjct: 62 QLPADKKTVLRNNAGGHANHSLFWKGLKK 90 >d1mnga1 a.2.11.1 (A:1-92) Mn superoxide dismutase (MnSOD) {Thermus thermophilus [TaxId: 274]} Length = 92 Score = 90.5 bits (224), Expect = 9e-20 Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 5/90 (5%) Query: 1 MDFKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKS 60 FKLP+L Y Y+ L P++ +T+E HH HH Y N LH E++++ Sbjct: 2 YPFKLPDLGYPYEALEPHIDAKTMEIHHQKHHGAYVTNLNAALEKYPYLHGVEVEVLLRH 61 Query: 61 H-----GSNAGLFNNASQYYNHNLFWACMK 85 + NN + NH+LFW + Sbjct: 62 LAALPQDIQTAVRNNGGGHLNHSLFWRLLT 91 >d1p7ga1 a.2.11.1 (A:12-103) Fe superoxide dismutase (FeSOD) {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Length = 92 Score = 88.6 bits (219), Expect = 3e-19 Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 2/89 (2%) Query: 1 MDFKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKS 60 + LP LPY+Y+ L PY+S E ++ HH HH+ Y + A E +I I++ Sbjct: 5 KRYTLPPLPYAYNALEPYISAEIMQLHHQKHHQGYVNGANAALEKLEKFRKGEAQIDIRA 64 Query: 61 HGSNAGLFNNASQYYNHNLFWACMKKNDG 89 + L + + + H++FW M Sbjct: 65 VLRD--LSFHLNGHILHSIFWPNMAPPGK 91 >d1wb8a1 a.2.11.1 (A:4-92) Fe superoxide dismutase (FeSOD) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 89 Score = 88.2 bits (218), Expect = 5e-19 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 1/85 (1%) Query: 1 MDFKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKS 60 ++LP LPY D L PY+SK+ ++ H++ HHK Y + A L E + + Sbjct: 4 KKYELPPLPYKIDALEPYISKDIIDVHYNGHHKGYVNGANSLLERLEKVVKGDLQTGQYD 63 Query: 61 -HGSNAGLFNNASQYYNHNLFWACM 84 G GL N + + H L+W M Sbjct: 64 IQGIIRGLTFNINGHKLHALYWENM 88 >d1gv3a1 a.2.11.1 (A:25-126) Mn superoxide dismutase (MnSOD) {Anabaena sp. [TaxId: 1167]} Length = 102 Score = 88.2 bits (218), Expect = 5e-19 Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 5/88 (5%) Query: 3 FKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKSHG 62 +LP LPY YD L + ET++ HHD HH Y +N L S E +++ Sbjct: 14 AELPPLPYGYDALEKAIDAETMKLHHDKHHAAYVNNLNNALKKHPELQNSSVEALLRDLN 73 Query: 63 SNA-----GLFNNASQYYNHNLFWACMK 85 S + NN + NH +FW M Sbjct: 74 SVPEDIRTTVRNNGGGHLNHTIFWQIMS 101 >d1my6a1 a.2.11.1 (A:1-88) Fe superoxide dismutase (FeSOD) {Thermosynechococcus elongatus [TaxId: 146786]} Length = 88 Score = 87.4 bits (216), Expect = 7e-19 Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 3/86 (3%) Query: 3 FKLPNLPYSYDDLSPY-MSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKS- 60 F LP+ L PY MS +TLE+H+ HHK Y DN KL D E+ SLE++I + Sbjct: 2 FVQEPLPFDPGALEPYGMSAKTLEFHYGKHHKGYVDNLNKLTQDTELADKSLEDVIRTTY 61 Query: 61 -HGSNAGLFNNASQYYNHNLFWACMK 85 + G+FNNA+Q +NH FW +K Sbjct: 62 GDAAKVGIFNNAAQVWNHTFFWNSLK 87 >d1ma1a1 a.2.11.1 (A:4-91) Fe superoxide dismutase (FeSOD) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Length = 88 Score = 87.4 bits (216), Expect = 7e-19 Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 2/83 (2%) Query: 3 FKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKSHG 62 ++LP LPY YD L P++S+E L HH HH+ Y D A L + S ++ IK+ Sbjct: 5 YELPELPYPYDALEPHISREQLTIHHQKHHQAYVDGANALLRKLDEARESDTDVDIKAAL 64 Query: 63 SNAGLFNNASQYYNHNLFWACMK 85 L + Y H FW M Sbjct: 65 KE--LSFHVGGYVLHLFFWGNMG 85 >d1jr9a1 a.2.11.1 (A:2-91) Mn superoxide dismutase (MnSOD) {Bacillus halodenitrificans [TaxId: 1482]} Length = 90 Score = 87.4 bits (216), Expect = 8e-19 Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 5/88 (5%) Query: 3 FKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALK-LASDAEMLHLSLEEIIIKSH 61 F+LP LPY+YD L P + KET+ HH HH Y L ++ + SL ++I Sbjct: 2 FELPELPYAYDALEPTIDKETMNIHHTKHHNTYVTKLNGALEGHEDLKNKSLNDLISNLD 61 Query: 62 GS----NAGLFNNASQYYNHNLFWACMK 85 + NN + NH+LFW M Sbjct: 62 AVPENIRTAVRNNGGGHANHSLFWKLMS 89 >d2nyba1 a.2.11.1 (A:1-82) Fe superoxide dismutase (FeSOD) {Escherichia coli [TaxId: 562]} Length = 82 Score = 87.0 bits (215), Expect = 1e-18 Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 3/83 (3%) Query: 3 FKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKSHG 62 F+LP LPY+ D L+P++S ET+EYH+ HH+ Y N L SLEEII Sbjct: 2 FELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEII---RS 58 Query: 63 SNAGLFNNASQYYNHNLFWACMK 85 S G+FNNA++ +NH +W C+ Sbjct: 59 SEGGVFNNAAEVWNHTFYWNCLA 81 >d1bsma1 a.2.11.1 (A:1-86) Cambialistic superoxide dismutase {Propionibacterium shermanii [TaxId: 1752]} Length = 86 Score = 87.0 bits (215), Expect = 1e-18 Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 2/85 (2%) Query: 3 FKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKSHG 62 + LP LPY Y L PY+S E +E HHD HHK Y D A + I Sbjct: 3 YTLPELPYDYSALEPYISGEIMELHHDKHHKAYVDGANTALDKLAEARDKADFGAINKLE 62 Query: 63 SNAGLFNNASQYYNHNLFWACMKKN 87 + L N + + NH++FW M Sbjct: 63 KD--LAFNLAGHVNHSVFWKNMAPK 85 >d1kkca1 a.2.11.1 (A:14-97) Mn superoxide dismutase (MnSOD) {Aspergillus fumigatus [TaxId: 5085]} Length = 84 Score = 85.8 bits (212), Expect = 2e-18 Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 2/83 (2%) Query: 3 FKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKSHG 62 + LP LPY YD L PY+S++ +E HH HH+ Y + + + + + S Sbjct: 3 YTLPPLPYPYDALQPYISQQIMELHHKKHHQTYVNGLNAALEAQKKAAEATDVPKLVSV- 61 Query: 63 SNAGLFNNASQYYNHNLFWACMK 85 + N + NH+LFW + Sbjct: 62 -QQAIKFNGGGHINHSLFWKNLA 83 >d1idsa1 a.2.11.1 (A:2-85) Fe superoxide dismutase (FeSOD) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 84 Score = 85.1 bits (210), Expect = 3e-18 Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 2/84 (2%) Query: 2 DFKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKSH 61 ++ LP+L + Y L P++S + E HH HH Y A + E + I Sbjct: 2 EYTLPDLDWDYGALEPHISGQINELHHSKHHATYVKGANDAVAKLEEARAKEDHSAILL- 60 Query: 62 GSNAGLFNNASQYYNHNLFWACMK 85 + L N + + NH ++W + Sbjct: 61 -NEKNLAFNLAGHVNHTIWWKNLS 83 >d2p4ka1 a.2.11.1 (A:1-83) Mn superoxide dismutase (MnSOD) {Human (Homo sapiens) [TaxId: 9606]} Length = 83 Score = 80.8 bits (199), Expect = 8e-17 Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 2/83 (2%) Query: 3 FKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKSHG 62 LP+LPY Y L P+++ + ++ HH HH +N + + + Sbjct: 2 HSLPDLPYDYGALEPHINAQIMQLHHSKHHAANVNNLNVTEEKYQEALAKGDVTAQIAL- 60 Query: 63 SNAGLFNNASQYYNHNLFWACMK 85 L N + NH++FW + Sbjct: 61 -QPALKFNGGGHINHSIFWTNLS 82 >d1coja1 a.2.11.1 (A:2-90) Fe superoxide dismutase (FeSOD) {Aquifex pyrophilus [TaxId: 2714]} Length = 89 Score = 67.0 bits (163), Expect = 1e-12 Identities = 12/87 (13%), Positives = 27/87 (31%), Gaps = 4/87 (4%) Query: 3 FKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKSHG 62 KL + +S E +E H + H+K Y ++ + + +++ Sbjct: 2 HKLEPKDHLKPQNLEGISNEQIEPHFEAHYKGYVAKYNEIQEKLADQNFADRSKANQNYS 61 Query: 63 S----NAGLFNNASQYYNHNLFWACMK 85 N H L++ + Sbjct: 62 EYRELKVEETFNYMGVVLHELYFGMLT 88 >d1yrza2 b.67.2.1 (A:1004-1320) Beta-D-xylosidase N-terminal domain {Bacillus halodurans [TaxId: 86665]} Length = 317 Score = 24.5 bits (52), Expect = 7.5 Identities = 11/49 (22%), Positives = 18/49 (36%), Gaps = 6/49 (12%) Query: 147 NPLINGAIPILGIDVWEHAYYL----DFKYRRAHYIESFITNLVNWEYV 191 NP++ G P I YY+ + S +L +W +V Sbjct: 4 NPILPGFHPDPSIVRVGDDYYIATSTFEWFPGVRIHHS--RDLKHWRFV 50 >d1y7ba2 b.67.2.1 (A:4-324) Beta-D-xylosidase N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]} Length = 321 Score = 24.2 bits (51), Expect = 8.5 Identities = 13/49 (26%), Positives = 19/49 (38%), Gaps = 6/49 (12%) Query: 147 NPLINGAIPILGIDVWEHAYYL----DFKYRRAHYIESFITNLVNWEYV 191 NP++ G P I + YY+ + S +LVNW V Sbjct: 3 NPILRGFNPDPSICRADTDYYIATSTFEWFPGVQIHHS--KDLVNWHLV 49 >d2ibaa2 d.96.1.4 (A:137-295) Urate oxidase (uricase) {Aspergillus flavus [TaxId: 5059]} Length = 159 Score = 24.0 bits (52), Expect = 9.6 Identities = 8/32 (25%), Positives = 15/32 (46%) Query: 1 MDFKLPNLPYSYDDLSPYMSKETLEYHHDVHH 32 +++ LPN Y DLS + + + +V Sbjct: 112 VEYSLPNKHYFEIDLSWHKGLQNTGKNAEVFA 143 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.317 0.133 0.410 Gapped Lambda K H 0.267 0.0543 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 821,161 Number of extensions: 36906 Number of successful extensions: 170 Number of sequences better than 10.0: 1 Number of HSP's gapped: 122 Number of HSP's successfully gapped: 45 Length of query: 205 Length of database: 2,407,596 Length adjustment: 81 Effective length of query: 124 Effective length of database: 1,295,466 Effective search space: 160637784 Effective search space used: 160637784 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 51 (23.8 bits)