HHsearch alignment for GI: 254780496 and conserved domain: pfam00216
>pfam00216 Bac_DNA_binding Bacterial DNA-binding protein.
Probab=99.93 E-value=2e-25 Score=177.33 Aligned_cols=90 Identities=34% Similarity=0.656 Sum_probs=89.1
Q ss_pred CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCEEEEC
Q ss_conf 66999999999971999999999999999999999755996000041699985026764306889888995688537761
Q gi|254780496|r 5 ITRSDLVKSISKEFGLSRKDSTRFVTTLFNEICDSAVRGEAIKISSFATFHVKQKGSRVGRNLQTNQEVKIDPRRVVVFK 84 (114)
Q Consensus 5 mtK~eli~~ia~~~g~s~~~~~~~v~~~~~~i~~~L~~g~~V~l~gfGtF~~~~~~~R~~rNP~Tge~i~ip~k~~v~Fk 84 (114)
T Consensus 1 mtK~~li~~ia~~~~ls~~~~~~~v~~~~~~i~~~L~~~~~v~i~gfG~F~~~~~~~r~~rNP~Tge~i~i~~~~~v~Fk 80 (90)
T pfam00216 1 MTKKELIKAIAEKTGLSKKDAEAIVDAFLDVITEALKKGEKVELRGFGTFEVRERKARTGRNPKTGEEIKIPAKKVVKFK 80 (90)
T ss_pred CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEEEEECCEEEECCCCCCEEEECCCCCEEEE
T ss_conf 97899999999864969999999999999999999967994985545899999605654288699978997597658980
Q ss_pred CCHHHHHHHH
Q ss_conf 6989999973
Q gi|254780496|r 85 ASSILKKRIM 94 (114)
Q Consensus 85 psk~Lk~~in 94 (114)
T Consensus 81 ~sk~lk~~iN 90 (90)
T pfam00216 81 PGKELKEAVN 90 (90)
T ss_pred CCHHHHHHHC
T ss_conf 6989998639