HHsearch alignment of GI: 254780496 and MMDB domain: 1hue_A_
>1hue_A (A:) HU protein; DNA-binding; NMR {Geobacillus stearothermophilus}
Probab=99.90 E-value=7.9e-24 Score=167.19 Aligned_cols=90 Identities=30% Similarity=0.628 Sum_probs=88.5
Q ss_pred CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCEEEEC
Q ss_conf 66999999999971999999999999999999999755996000041699985026764306889888995688537761
Q gi|254780496|r 5 ITRSDLVKSISKEFGLSRKDSTRFVTTLFNEICDSAVRGEAIKISSFATFHVKQKGSRVGRNLQTNQEVKIDPRRVVVFK 84 (114)
Q Consensus 5 mtK~eli~~ia~~~g~s~~~~~~~v~~~~~~i~~~L~~g~~V~l~gfGtF~~~~~~~R~~rNP~Tge~i~ip~k~~v~Fk 84 (114)
|||+|||..|++++++++.+++.++++|++.|.++|.+|+.|+|+|||+|+++.+++|.++||+|||.+.+|++++|+|+
T Consensus 1 Mtk~~li~~i~~~~~~s~~~v~~~i~~~~~~i~~~L~~~~~v~l~~fG~F~v~~~~~r~~~Np~Tge~~~i~~k~~vkFr 80 (90)
T 1hue_A 1 MNKTELINAVAETSGLSKKDATKAVDAVFDSITEALRKGDKVQLIGFGNFEVRERAARKGRNPQTGEEMEIPASKVPAFK 80 (90)
T ss_dssp CBSHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTCCCCBTTTBEECCCCCCCCEEECSSSSSEEECCCCCCCCEE
T ss_pred CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEE
T ss_conf 97899999999854989999999999999999999965982884024399998616844558399988995487418981
Q ss_pred CCHHHHHHHH
Q ss_conf 6989999973
Q gi|254780496|r 85 ASSILKKRIM 94 (114)
Q Consensus 85 psk~Lk~~in 94 (114)
||+.|++.|.
T Consensus 81 ~sk~lk~~ik 90 (90)
T 1hue_A 81 PGKALKDAVK 90 (90)
T ss_dssp CTTHHHHHTC
T ss_pred CCHHHHHHHC
T ss_conf 3989998639