HHsearch alignment of GI: 254780496 and MMDB domain: 1owf_B_
>1owf_B (B:) IHF-beta, integration HOST factor beta-subunit; protein-DNA recognition, indirect readout, DNA bending, minor groove; 1.95A {Escherichia coli}
Probab=99.92 E-value=6.5e-25 Score=173.83 Aligned_cols=92 Identities=24% Similarity=0.437 Sum_probs=89.8
Q ss_pred CCHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCEEEE
Q ss_conf 6699999999997-199999999999999999999975599600004169998502676430688988899568853776
Q gi|254780496|r 5 ITRSDLVKSISKE-FGLSRKDSTRFVTTLFNEICDSAVRGEAIKISSFATFHVKQKGSRVGRNLQTNQEVKIDPRRVVVF 83 (114)
Q Consensus 5 mtK~eli~~ia~~-~g~s~~~~~~~v~~~~~~i~~~L~~g~~V~l~gfGtF~~~~~~~R~~rNP~Tge~i~ip~k~~v~F 83 (114)
|||+|||+.|+++ +++++.+++.++++|+++|.++|.+|++|+|+|||+|+++.+++|.++||+|||.+.||++++|+|
T Consensus 1 MtK~eli~~ia~~~~~~sk~~~~~~v~~~~~~i~~~L~~~~~V~l~gfG~F~~~~r~~r~~~nP~Tge~~~ip~k~~v~F 80 (94)
T 1owf_B 1 MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIAIRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHF 80 (94)
T ss_dssp CBHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHTTCCEEETTTEEEEEEEECCEEEECTTTCCEEEECCEEEEEE
T ss_pred CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEEEECCCCCCCCCCCCEEEECCCCCEEE
T ss_conf 97899999999876999999999999999999999997699599657379999860683333849999898648631898
Q ss_pred CCCHHHHHHHHHH
Q ss_conf 1698999997311
Q gi|254780496|r 84 KASSILKKRIMDD 96 (114)
Q Consensus 84 kpsk~Lk~~in~~ 96 (114)
+||+.||+.||..
T Consensus 81 kpsk~lk~~vn~~ 93 (94)
T 1owf_B 81 KPGKELRDRANIY 93 (94)
T ss_dssp EECHHHHHHHCCC
T ss_pred ECCHHHHHHHCCC
T ss_conf 1698999987559