HHsearch alignment of GI: 254780496 and MMDB domain: 2iie_A_

>2iie_A (A:) Integration HOST factor; DNA kinking, bending, U-turn, intercalation, divalent, metal, recombination/DNA complex; HET: DNA; 2.41A {Escherichia coli} PDB: 2iif_A*
Probab=99.91  E-value=2e-24  Score=170.86  Aligned_cols=100  Identities=32%  Similarity=0.583  Sum_probs=90.7

Q ss_pred             CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCE
Q ss_conf             98766699999999997199999999999999999999975599600004169998502676430688988899568853
Q gi|254780496|r    1 MSKTITRSDLVKSISKEFGLSRKDSTRFVTTLFNEICDSAVRGEAIKISSFATFHVKQKGSRVGRNLQTNQEVKIDPRRV   80 (114)
Q Consensus         1 m~~~mtK~eli~~ia~~~g~s~~~~~~~v~~~~~~i~~~L~~g~~V~l~gfGtF~~~~~~~R~~rNP~Tge~i~ip~k~~   80 (114)
                      |.++|||+|||+.||+++|+++++++.+|++|+++|.++|.+|+.|+|+|||+|+++.+++|.++||+|||.+.+|++++
T Consensus        43 ~~~~MtK~eLi~~ia~~~glskk~a~~ii~~~~~~I~e~L~~g~~V~l~gfGtF~v~~r~~R~~rNP~Tge~i~i~~kk~  122 (204)
T 2iie_A           43 GSGGLTKAEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENGEQVKLSGFGNFDLRDKNQRPGRNPKTGEDIPITARRV  122 (204)
T ss_dssp             CSSSBCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTTCEEEETTTEEEEEEEECCBCCBCTTTCCBCCBCCEEE
T ss_pred             CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECCCCCCCCCCCCEEEECCCCC
T ss_conf             56883599999999998697999999999999999999996699256511589999876471123889998898648651


Q ss_pred             EEECCCHHHHHHHHHHHCCC
Q ss_conf             77616989999973111013
Q gi|254780496|r   81 VVFKASSILKKRIMDDMRGR  100 (114)
Q Consensus        81 v~Fkpsk~Lk~~in~~~~~~  100 (114)
                      |+|+||+.|+..++....+.
T Consensus       123 vkFk~~k~LK~iveaL~~ge  142 (204)
T 2iie_A          123 VTFRPGQKLKSRVENAGGGE  142 (204)
T ss_dssp             EEEEECHHHHHHHHHHCCCC
T ss_pred             EEEEECHHHHHHHHCCCCCC
T ss_conf             79995479998864134465