HHsearch alignment of GI: 254780496 and MMDB domain: 2iie_A_
>2iie_A (A:) Integration HOST factor; DNA kinking, bending, U-turn, intercalation, divalent, metal, recombination/DNA complex; HET: DNA; 2.41A {Escherichia coli} PDB: 2iif_A*
Probab=99.91 E-value=2e-24 Score=170.86 Aligned_cols=100 Identities=32% Similarity=0.583 Sum_probs=90.7
Q ss_pred CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCE
Q ss_conf 98766699999999997199999999999999999999975599600004169998502676430688988899568853
Q gi|254780496|r 1 MSKTITRSDLVKSISKEFGLSRKDSTRFVTTLFNEICDSAVRGEAIKISSFATFHVKQKGSRVGRNLQTNQEVKIDPRRV 80 (114)
Q Consensus 1 m~~~mtK~eli~~ia~~~g~s~~~~~~~v~~~~~~i~~~L~~g~~V~l~gfGtF~~~~~~~R~~rNP~Tge~i~ip~k~~ 80 (114)
|.++|||+|||+.||+++|+++++++.+|++|+++|.++|.+|+.|+|+|||+|+++.+++|.++||+|||.+.+|++++
T Consensus 43 ~~~~MtK~eLi~~ia~~~glskk~a~~ii~~~~~~I~e~L~~g~~V~l~gfGtF~v~~r~~R~~rNP~Tge~i~i~~kk~ 122 (204)
T 2iie_A 43 GSGGLTKAEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENGEQVKLSGFGNFDLRDKNQRPGRNPKTGEDIPITARRV 122 (204)
T ss_dssp CSSSBCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTTCEEEETTTEEEEEEEECCBCCBCTTTCCBCCBCCEEE
T ss_pred CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECCCCCCCCCCCCEEEECCCCC
T ss_conf 56883599999999998697999999999999999999996699256511589999876471123889998898648651
Q ss_pred EEECCCHHHHHHHHHHHCCC
Q ss_conf 77616989999973111013
Q gi|254780496|r 81 VVFKASSILKKRIMDDMRGR 100 (114)
Q Consensus 81 v~Fkpsk~Lk~~in~~~~~~ 100 (114)
|+|+||+.|+..++....+.
T Consensus 123 vkFk~~k~LK~iveaL~~ge 142 (204)
T 2iie_A 123 VTFRPGQKLKSRVENAGGGE 142 (204)
T ss_dssp EEEEECHHHHHHHHHHCCCC
T ss_pred EEEEECHHHHHHHHCCCCCC
T ss_conf 79995479998864134465