HHsearch alignment of GI: 254780496 and MMDB domain: 2iie_A_

>2iie_A (A:) Integration HOST factor; DNA kinking, bending, U-turn, intercalation, divalent, metal, recombination/DNA complex; HET: DNA; 2.41A {Escherichia coli} PDB: 2iif_A*

Probab=99.70  E-value=3e-17  Score=126.85  Aligned_cols=70  Identities=26%  Similarity=0.361  Sum_probs=65.5

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCEEEECCCHHHHHHHHHHHC
Q ss_conf             9999999999975599600004169998502676430688988899568853776169899999731110
Q gi|254780496|r   29 VTTLFNEICDSAVRGEAIKISSFATFHVKQKGSRVGRNLQTNQEVKIDPRRVVVFKASSILKKRIMDDMR   98 (114)
Q Consensus        29 v~~~~~~i~~~L~~g~~V~l~gfGtF~~~~~~~R~~rNP~Tge~i~ip~k~~v~Fkpsk~Lk~~in~~~~   98 (114)
                      ...+++.+.+++..++.|.|+|||+|+++.+++|.||||+|||.|.||++++|+|+||+.||++||....
T Consensus       127 ~~k~LK~iveaL~~ge~V~i~~fG~F~~~~r~~R~grNP~Tge~i~Ipa~~~~~Fk~~k~lk~~vn~~~~  196 (204)
T 2iie_A          127 PGQKLKSRVENAGGGERIEIRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYGG  196 (204)
T ss_dssp             ECHHHHHHHHHHCCCCCEEETTTEEEEEEEECCEEEECTTTCCEEEECCEEEEEEEECHHHHHHHCSSCC
T ss_pred             ECHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCEEECCCHHHHHHHCCCCC
T ss_conf             5479998864134465422265688998740673561929999888659753687878899998757999