HHsearch results for GI: 254780496 and protein with PDBid: 1hue_A
>1hue_A HU protein; DNA-binding; NMR {Geobacillus stearothermophilus} SCOP: a.55.1.1 PDB: 1huu_A
Probab=99.92 E-value=1.5e-25 Score=176.76 Aligned_cols=90 Identities=30% Similarity=0.628 Sum_probs=88.4
Q ss_pred CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCEEEEC
Q ss_conf 66999999999971999999999999999999999755996000041699985026764306889888995688537761
Q gi|254780496|r 5 ITRSDLVKSISKEFGLSRKDSTRFVTTLFNEICDSAVRGEAIKISSFATFHVKQKGSRVGRNLQTNQEVKIDPRRVVVFK 84 (114)
Q Consensus 5 mtK~eli~~ia~~~g~s~~~~~~~v~~~~~~i~~~L~~g~~V~l~gfGtF~~~~~~~R~~rNP~Tge~i~ip~k~~v~Fk 84 (114)
|||+|||+.||+++|+++++++.++++|+++|.++|.+|++|+|+|||+|+++.+++|.||||+|||.+.||++++|+|+
T Consensus 1 MtK~eli~~la~~~~l~~~~~~~~v~~~~~~i~~~L~~~~~v~i~~fG~F~~~~~~~r~~rNP~Tge~i~ip~k~~v~Fk 80 (90)
T 1hue_A 1 MNKTELINAVAETSGLSKKDATKAVDAVFDSITEALRKGDKVQLIGFGNFEVRERAARKGRNPQTGEEMEIPASKVPAFK 80 (90)
T ss_dssp CBSHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTCCCCBTTTBEECCCCCCCCEEECSSSSSEEECCCCCCCCEE
T ss_pred CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECEEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEE
T ss_conf 97899999999875989999999999999999999964996576420699999847821278599988997387318996
Q ss_pred CCHHHHHHHH
Q ss_conf 6989999973
Q gi|254780496|r 85 ASSILKKRIM 94 (114)
Q Consensus 85 psk~Lk~~in 94 (114)
||+.|++.|.
T Consensus 81 psk~lk~~ik 90 (90)
T 1hue_A 81 PGKALKDAVK 90 (90)
T ss_dssp CTTHHHHHTC
T ss_pred ECHHHHHHHC
T ss_conf 4989998639