HHsearch results for GI: 254780496 and protein with PDBid: 1owf_B
>1owf_B IHF-beta, integration HOST factor beta-subunit; protein-DNA recognition, indirect readout, DNA bending, minor groove; 1.95A {Escherichia coli} SCOP: a.55.1.1 PDB: 1ouz_B 2ht0_B 1ihf_B 1owg_B
Probab=99.93 E-value=5e-26 Score=179.73 Aligned_cols=91 Identities=24% Similarity=0.452 Sum_probs=88.5
Q ss_pred CCHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCEEEE
Q ss_conf 6699999999997-199999999999999999999975599600004169998502676430688988899568853776
Q gi|254780496|r 5 ITRSDLVKSISKE-FGLSRKDSTRFVTTLFNEICDSAVRGEAIKISSFATFHVKQKGSRVGRNLQTNQEVKIDPRRVVVF 83 (114)
Q Consensus 5 mtK~eli~~ia~~-~g~s~~~~~~~v~~~~~~i~~~L~~g~~V~l~gfGtF~~~~~~~R~~rNP~Tge~i~ip~k~~v~F 83 (114)
|||+|||+.|+.+ +++++++++.+|++|++.|.++|.+|++|+|+|||+|+++.+++|.||||+|||.++||++++|+|
T Consensus 1 MtK~eli~~ia~~~~~ls~~~~~~~v~~~~~~i~~~L~~~~~V~i~gfG~F~~~~~~~R~~rNPkTge~i~ip~k~~v~F 80 (94)
T 1owf_B 1 MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIAIRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHF 80 (94)
T ss_dssp CBHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHTTCCEEETTTEEEEEEEECCEEEECTTTCCEEEECCEEEEEE
T ss_pred CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEEEEECCCEEECCCCCCEEEECCCCCEEE
T ss_conf 97899999999867999999999999999999999997699599444089999983670137839998898648631898
Q ss_pred CCCHHHHHHHHH
Q ss_conf 169899999731
Q gi|254780496|r 84 KASSILKKRIMD 95 (114)
Q Consensus 84 kpsk~Lk~~in~ 95 (114)
+||+.|+++||-
T Consensus 81 k~sk~lk~~vN~ 92 (94)
T 1owf_B 81 KPGKELRDRANI 92 (94)
T ss_dssp EECHHHHHHHCC
T ss_pred ECCHHHHHHHCC
T ss_conf 179899998755