HHsearch results for GI: 254780496 and protein with PDBid: 2o97_B

>2o97_B NS1, HU-1, DNA-binding protein HU-beta; heterodimer, DNA structure, DNA supercoiling, E. coli; 2.45A {Escherichia coli} SCOP: a.55.1.1
Probab=99.93  E-value=2.6e-26  Score=181.44  Aligned_cols=90  Identities=28%  Similarity=0.517  Sum_probs=89.2

Q ss_pred             CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCEEEEC
Q ss_conf             66999999999971999999999999999999999755996000041699985026764306889888995688537761
Q gi|254780496|r    5 ITRSDLVKSISKEFGLSRKDSTRFVTTLFNEICDSAVRGEAIKISSFATFHVKQKGSRVGRNLQTNQEVKIDPRRVVVFK   84 (114)
Q Consensus         5 mtK~eli~~ia~~~g~s~~~~~~~v~~~~~~i~~~L~~g~~V~l~gfGtF~~~~~~~R~~rNP~Tge~i~ip~k~~v~Fk   84 (114)
                      |||+|||+.||+++|+++++++.++++|+++|.++|.+|++|+|+|||+|+++.+++|.||||+|||.++||++++|+|+
T Consensus         1 M~K~eLi~~ia~~~~ls~~~~~~~v~~~~~~i~~~L~~~~~V~i~gfG~F~~~~~~~R~~rNP~Tge~i~ip~k~~v~Fk   80 (90)
T 2o97_B            1 MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVALVGFGTFAVKERAARTGRNPQTGKEITIAAAKVPSFR   80 (90)
T ss_dssp             CBHHHHHHHHHHTTC-CHHHHHHHHHHHHHHHHHHHHTTCCEEETTTEEEEEECCC------------------CEEEEE
T ss_pred             CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECEEEEEEEEEECCEEEECCCCCCEEEECCCCEEEEE
T ss_conf             97899999999722989999999999999999999973998663306799999866735068799988997487308996


Q ss_pred             CCHHHHHHHH
Q ss_conf             6989999973
Q gi|254780496|r   85 ASSILKKRIM   94 (114)
Q Consensus        85 psk~Lk~~in   94 (114)
                      ||+.|++.||
T Consensus        81 psk~lk~~vN   90 (90)
T 2o97_B           81 AGKALKDAVN   90 (90)
T ss_dssp             ECHHHHHHCC
T ss_pred             CCHHHHHHHC
T ss_conf             1989998639