RPSBLAST alignment of GI: 254780496 and protein with PDBid: 3c4i
>3c4i_A DNA-binding protein HU homolog; dimerization by four helix bundle interaction, DNA condensation; 2.04A {Mycobacterium tuberculosis} Length = 99
Score = 88.3 bits (219), Expect = 4e-19
Identities = 21/88 (23%), Positives = 49/88 (55%)
Query: 6 TRSDLVKSISKEFGLSRKDSTRFVTTLFNEICDSAVRGEAIKISSFATFHVKQKGSRVGR 65
+++L+ ++++ G R+ +T V + + I + +G+++ I+ F F +++ +RV R
Sbjct: 2 NKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVAR 61
Query: 66 NLQTNQEVKIDPRRVVVFKASSILKKRI 93
N +T + VK+ P V F+ + K +
Sbjct: 62 NPRTGETVKVKPTSVPAFRPGAQFKAVV 89