HHsearch alignment for GI: 254780497 and conserved domain: PRK06059
>PRK06059 lipid-transfer protein; Provisional.
Probab=99.68 E-value=8e-15 Score=114.36 Aligned_cols=263 Identities=17% Similarity=0.229 Sum_probs=156.3
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC--CCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 889999999999999974021235443366501223345898--531001122026864444210122003467888998
Q gi|254780497|r 49 DETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPS--TAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSY 126 (324)
Q Consensus 49 ~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~--~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~l 126 (324)
T Consensus 20 ~r~~~~l~~eA~~~AL~DAGl~~~dVD~v~~~~~~~~~-~~~~~~~~~~a~~lGl~g~p~~~v~~~~asG~~a~~~A~~~ 98 (399)
T PRK06059 20 GRDFTEYGVVAARAALADAGLDWRQVQLVAGADTIRNG-YPGFVAGATFAQKLGWNGVPVTSSYAACASGSQALQSARAQ 98 (399)
T ss_pred CCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCC-CCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 97989999999999998559998994688430345667-77532269999975998863112116248999999999999
Q ss_pred HHHCCCCCCEEEEECCCCCCC------------CCC--------------------------------------------
Q ss_conf 964155653167630224322------------245--------------------------------------------
Q gi|254780497|r 127 IRSGVVRRVMVIGSDTFSRIV------------DWS-------------------------------------------- 150 (324)
Q Consensus 127 i~~g~~~~~Lvv~~e~~S~~~------------d~~-------------------------------------------- 150 (324)
T Consensus 99 I~sG~~d~vlvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p~~~Al~a~rym~~yG~t~e~lA~vavk~~~~a~~ 178 (399)
T PRK06059 99 ILAGFCDVALVIGADTTPKGFFAPVGGERKNDPDWQRFHLIGATNTVYFALLARRRMDLYGATVEDFAQVKVKNARHGLD 178 (399)
T ss_pred HHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 98499878999403357876544554556677114443014785088999999999999797999999999999987710
Q ss_pred CCC-------------------------CCCCCCCCCCEEEEECCCCCCCCCC---C-CCCEEEEEECCCCCCCCEEECC
Q ss_conf 663-------------------------2323454431234402654465434---4-5410123203555556177548
Q gi|254780497|r 151 DRS-------------------------TCVLFGDGAGALILEGVEVKGSSMA---D-TGILSTYLCSDGSYIDKLYVDG 201 (324)
Q Consensus 151 d~~-------------------------~~~lfGDGAaA~ll~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~ 201 (324)
T Consensus 179 NP~A~~r~~it~edvl~s~~Ia~PL~l~dc~~~sDGAaAvVl~s~e~A~~~~~~~~~~~~i~~~~~~~-~~~~~~----- 252 (399)
T PRK06059 179 NPNARYRKEVSVEDVLASPVVSDPLRLLDICATSDGAAALIVASKSFAEKHLGSVAGVPSVRAISTVT-PQYPQH----- 252 (399)
T ss_pred CCHHHCCCCCCHHHHCCCCHHHHCCCCCCCCCCCCCEEEEEEECHHHHHHHCCCCCCCEEEEEEEEEC-CCCCCC-----
T ss_conf 92866689988788723826452615513178888508999955999987223567883999998405-754433-----
Q ss_pred CCCCCCCCCCHHHCCHHHHHHHHHHH-HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH----HHH---
Q ss_conf 76544433200103202444557777-7778888987400100012102444441589999997197876----733---
Q gi|254780497|r 202 GPSTSRTVGCIRMEGKAVFKYAVEKA-VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFD----KVI--- 273 (324)
Q Consensus 202 ~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e----~~~--- 273 (324)
T Consensus 253 ----~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ay~~AGi~p~DiDvae~yD~ft~~~l~~lE~lGf~~~Ge~~~~v~~G 328 (399)
T PRK06059 253 ----LPELPDIATDSTAAVPAPERVFKDQILDAAYAEAGIGPEDLSLAEVYDLSTALELDWYEHLGLCPKGEAEALLRSG 328 (399)
T ss_pred ----CCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHCC
T ss_conf ----3233321222101023315567899999999982999788727753166609899999984997898379999779
Q ss_pred ---------HH----HHHHCCCHHHHHHHHHHHHHHC--CCC----CCCCEEEEEEECCCCCE-EEEEE
Q ss_conf ---------65----8651933012699999999980--688----99989999997145014-56878
Q gi|254780497|r 274 ---------VT----VDIHGNTSAASIPLALAVAVKE--GRV----KKGDCLLLEAMGGGFTS-GTVLL 322 (324)
Q Consensus 274 ---------~~----~~~~Gn~~sas~~~~L~~~~~~--g~l----~~Gd~vll~~~G~G~s~-~a~ll 322 (324)
T Consensus 329 ~~~~~G~lPvNtsGGlls~Ghp~gatG~~~~~E~~~QLrG~Ag~rQV~~a~~gl~~n~G~~~~~~~~~~ 397 (399)
T PRK06059 329 ATTLGGRIPVNPSGGLACFGEAIPAQAIAQVCELTWQLRGQATGRQVEGAKVGITANQGLFGHGSSVIV 397 (399)
T ss_pred CCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEE
T ss_conf 966799703558860211899661579999999999974887677389861788747788777329998