HHsearch alignment for GI: 254780497 and conserved domain: PRK06147

Probab=99.48  E-value=4.3e-11  Score=90.53  Aligned_cols=248  Identities=16%  Similarity=0.231  Sum_probs=155.6

Q ss_pred             HHHHHHHHHHHHHHHH-CCCCCCCCEEEEECCC-CCC-CC---CCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             9999999999999740-2123544336650122-334-58---98531001122026-8644442101220034678889
Q gi|254780497|r   52 TASLGEAAARDALHHA-EMSVDDIDLIIVATST-PDQ-TF---PSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTAD  124 (324)
Q Consensus        52 ~~~la~~Aa~~al~~a-~~~~~~Id~ii~~s~~-~~~-~~---p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~  124 (324)
T Consensus        64 l~~la~~Al~eal~~~~~~~~~~~~l~l~l~e~~r~g~~~~~~~~~l~~l~~~~g~~~~~~s~~~~~G~as~~~al~~A~  143 (346)
T PRK06147         64 LAAMAAPALAEALEGLPALDASEAPLLLCVAEEERPGRPAGLEERLLRSLEEELGLRFEPGSAVIARGRVSGAVALLQAR  143 (346)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHH
T ss_conf             99999999999985078656323646998366557778751057899999987275667660565256304999999999


Q ss_pred             HHHHHCCCCCCEEEEECCCCC------------CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf             989641556531676302243------------22245663232345443123440265446543445410123203555
Q gi|254780497|r  125 SYIRSGVVRRVMVIGSDTFSR------------IVDWSDRSTCVLFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGS  192 (324)
Q Consensus       125 ~li~~g~~~~~Lvv~~e~~S~------------~~d~~d~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~  192 (324)
T Consensus       144 ~~l~~g~~~~~lv~GvDS~~~~~~l~~~~~~~rL~~~-~~~~GfvpGEgAa~llL~~~~~a~~rg--a~i~g~g~g~e~a  220 (346)
T PRK06147        144 RLIAAGGCPRVLVAGVDSLLTGPTLAHYEARERLLSS-QNSNGFIPGEAAAAVLLGRPAAARAPQ--LPCLGLGLGREPA  220 (346)
T ss_pred             HHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCC-CCCCCCCCCCHHEEEEECCCCHHHCCC--CCEEEEEEECCCC
T ss_conf             9986599987999987234787899999860542689-998895852020478852611001479--8234566203665


Q ss_pred             CCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH--H---HHHHHCCC
Q ss_conf             556177548765444332001032024445577777778888987400100012102444441589--9---99997197
Q gi|254780497|r  193 YIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRII--N---SIVDKMKI  267 (324)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~--~---~~~~~lgl  267 (324)
T Consensus       221 ~~~----------~~~---~p~~g--------~Gl~~A~~~Al~~ag~~~~~v~~~~ad~nGe~~r~~e~~~a~~R~~~~  279 (346)
T PRK06147        221 TVE----------SED---LPLRG--------DGLTQAFRAALAEAGIGLEDVGYRLADLNGEQYRFKEAALAESRLFRV  279 (346)
T ss_pred             CCC----------CCC---CCCCC--------HHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCC
T ss_conf             334----------778---99865--------799999999998627985677779968998844213799999975202


Q ss_pred             CHH--HHHHHHHHHCCCHHHHHHHHHHHH---HHCCCCCCCCEEEEEEECCCCCEEEEEEEC
Q ss_conf             876--733658651933012699999999---980688999899999971450145687869
Q gi|254780497|r  268 PFD--KVIVTVDIHGNTSAASIPLALAVA---VKEGRVKKGDCLLLEAMGGGFTSGTVLLRW  324 (324)
Q Consensus       268 ~~e--~~~~~~~~~Gn~~sas~~~~L~~~---~~~g~l~~Gd~vll~~~G~G~s~~a~llrw  324 (324)
T Consensus       280 ~~~~~~~~~pa~~~G~~GAA~G~~~~a~a~~a~~~g-~~pg~~~l~~~s~d~g~r~A~~l~~  340 (346)
T PRK06147        280 PHEFPDLWHPAECLGECGAALGPALLGVALAASRKG-YGPGPPVLCHASDDDGARGAAVLEY  340 (346)
T ss_pred             CCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHC-CCCCCCEEEEECCCCCCEEEEEEEE
T ss_conf             566666568777516478899999999999999828-6899867999547887526999850