HHsearch alignment for GI: 254780497 and conserved domain: PRK06158
>PRK06158 thiolase; Provisional.
Probab=99.60 E-value=2.5e-13 Score=104.81 Aligned_cols=248 Identities=18% Similarity=0.163 Sum_probs=150.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 89889999999999999974021235443366501223345898531001122026864444210122003467888998
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSY 126 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~l 126 (324)
T Consensus 23 ~~~~s~~eL~~eA~~~Al~DAGi~~~dID~~~~g~~~~--~--~~g~~~a~~lGl~~~~~~~~~~ggas~~~al~~A~~a 98 (384)
T PRK06158 23 APGLSAMELLAQAAVRALADAGLTMADVDGLFTASPDS--A--LWGLSVAEYLGIRPRFVDGTMIGGSSFVSHLLPAALA 98 (384)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCC--C--CHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHH
T ss_conf 89979999999999999997599999909899971576--6--5399999982999812436666868999999999999
Q ss_pred HHHCCCCCCEEEEECCCCCC-------CC---------------------------------------------------
Q ss_conf 96415565316763022432-------22---------------------------------------------------
Q gi|254780497|r 127 IRSGVVRRVMVIGSDTFSRI-------VD--------------------------------------------------- 148 (324)
Q Consensus 127 i~~g~~~~~Lvv~~e~~S~~-------~d--------------------------------------------------- 148 (324)
T Consensus 99 I~sG~~d~vlV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~~~Al~a~rym~~yG~t~E~lA~vavk~r~nA~~NP~ 178 (384)
T PRK06158 99 LEAGLCDVALICYGSNQRSAGGKLVSMLDPQPYEAPYKPVNPVTAYALAAARHMHQYGTTREQLAEVAVAARQWAQLNPE 178 (384)
T ss_pred HHCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 98588538999523555556655433568744443235554688999999999999798899999999999998706986
Q ss_pred --CCCCC------------------CCCCCCCCCCEEEEECCCCCCCCCCCCCC--EEEEEECCCCCCCCEEECCCCCCC
Q ss_conf --45663------------------23234544312344026544654344541--012320355555617754876544
Q gi|254780497|r 149 --WSDRS------------------TCVLFGDGAGALILEGVEVKGSSMADTGI--LSTYLCSDGSYIDKLYVDGGPSTS 206 (324)
Q Consensus 149 --~~d~~------------------~~~lfGDGAaA~ll~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 206 (324)
T Consensus 179 A~~r~~it~edvl~s~~Ia~PL~l~dc~~~sDGAaAvVl~s~e~Ar-~l~~~pV~i~g~g~~~~~--------------- 242 (384)
T PRK06158 179 AFMRDPLTIDDVLAARMVSDPLSVRDCCLVTDGAGAVVMVRADRAR-DLPRPPVYVLGAAAATWH--------------- 242 (384)
T ss_pred CCCCCCCCHHHHHCCCCCCCCHHHCCCCCCCCCEEEEEEECHHHHH-HCCCCCEEEEEEEEECCC---------------
T ss_conf 3137887999972153545660011466566634899995288884-479995799999986168---------------
Q ss_pred CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH----HHH---------
Q ss_conf 4332001032024445577777778888987400100012102444441589999997197876----733---------
Q gi|254780497|r 207 RTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFD----KVI--------- 273 (324)
Q Consensus 207 ~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e----~~~--------- 273 (324)
T Consensus 243 --~~~~~~--~d~---~~~~~~~aa~~A~~~AGi~p~DiDvaev~D~Ft~~~l~~~E~lG~~~~Ge~~~~v~~G~~~~~G 315 (384)
T PRK06158 243 --RQISSM--PDL---TVTAAAESGPRAFAMAGVTPADIDVVELYDAFTINTILFLEDLGFCAKGEGGAFVEGGRIAPGG 315 (384)
T ss_pred --CCCCCC--CCC---CHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCC
T ss_conf --764335--521---0279999999999980999777878864177608899999984999898469999779956799
Q ss_pred ---HH----HHHHCCCHHHHHHHHHHHHHHC-------CCCCCCCEEEEEEEC-CCCCEEEEEE
Q ss_conf ---65----8651933012699999999980-------688999899999971-4501456878
Q gi|254780497|r 274 ---VT----VDIHGNTSAASIPLALAVAVKE-------GRVKKGDCLLLEAMG-GGFTSGTVLL 322 (324)
Q Consensus 274 ---~~----~~~~Gn~~sas~~~~L~~~~~~-------g~l~~Gd~vll~~~G-~G~s~~a~ll 322 (324)
T Consensus 316 ~~PvN~sGGlls~GhpGat-G~~~~~E~~~QLrG~ag~rQV~~a~~al~~~~GG~~~~~~~~vL 378 (384)
T PRK06158 316 RLPVNTNGGGLSCVHPGMY-GLFLIIEAVRQLRGEAGERQVAGAEVALAHGNGGVLSSQATAIL 378 (384)
T ss_pred CEEECCCCHHHCCCCCHHH-HHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEE
T ss_conf 7415379701238996177-99999999999617756675898778999688862211599998