HHsearch alignment for GI: 254780497 and conserved domain: PRK08947
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed.
Probab=99.46 E-value=2e-12 Score=99.08 Aligned_cols=100 Identities=16% Similarity=0.143 Sum_probs=83.1
Q ss_pred CCCCCHHHHHHHHHHHHHHH-HCCCCCCCCEEEEECCCCCC-CCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHH
Q ss_conf 89889999999999999974-02123544336650122334-5898531001122026-864444210122003467888
Q gi|254780497|r 47 GKDETTASLGEAAARDALHH-AEMSVDDIDLIIVATSTPDQ-TFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTA 123 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~-a~~~~~~Id~ii~~s~~~~~-~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A 123 (324)
T Consensus 22 l~~~~~~~L~a~~i~~~l~r~~~l~~~~Id~vi~G~v~~~~~~g~n~aR~aaL~aGlp~~vpa~tVnr~C~SGl~Ai~~A 101 (387)
T PRK08947 22 FRNVRAEDLSAHLMRALLARNPALDPAEIEDIIWGCVQQTLEQGFNIARNAALLAGIPHTVPAVTVNRLCGSSMQALHDA 101 (387)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHH
T ss_conf 78899999999999999974589698998989997066554433359999999769998886166401423799999999
Q ss_pred HHHHHHCCCCCCEEEEECCCCCC
Q ss_conf 99896415565316763022432
Q gi|254780497|r 124 DSYIRSGVVRRVMVIGSDTFSRI 146 (324)
Q Consensus 124 ~~li~~g~~~~~Lvv~~e~~S~~ 146 (324)
T Consensus 102 a~~I~~G~~dvvlaGGvEsMS~~ 124 (387)
T PRK08947 102 ARAIMTGDGDVFLIGGVEHMGHV 124 (387)
T ss_pred HHHHCCCCCCEEEEEEECCCCCC
T ss_conf 98652799778998410225778