HHsearch alignment for GI: 254780497 and conserved domain: TIGR02845

>TIGR02845 spore_V_AD stage V sporulation protein AD; InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation ..
Probab=95.33  E-value=0.04  Score=33.30  Aligned_cols=66  Identities=18%  Similarity=0.398  Sum_probs=39.4

Q ss_pred             HHHHHHHHHHHHHHHCCCC--CCCCCCCCCCCHHHH------HHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf             7777778888987400100--012102444441589------99999719787673365865193301269999999998
Q gi|254780497|r  225 EKAVELIEKVFDSTHLTIE--NIDWFVPHQANWRII------NSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVK  296 (324)
Q Consensus       225 ~~~~~~i~~~L~~~gl~~~--did~~~~Hq~~~~~~------~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~  296 (324)
T Consensus        52 ~lm~~Av~~aL~Ka~l~~~PP~vD~~LA----GDLLNQ~~~anFvAR~L~iP---f---lGLygACsTs~E~L~~gA~lv  121 (331)
T TIGR02845        52 KLMEDAVNLALKKANLKKDPPDVDFFLA----GDLLNQIITANFVARELGIP---F---LGLYGACSTSMETLALGAMLV  121 (331)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCEEEEEH----HHHHHHHHHHHHHHHHCCCC---C---EECCCHHHHHHHHHHHHHHHH
T ss_conf             9999999998753587127872111201----03666789998988745888---2---340213578999999999998


Q ss_pred             CCCC
Q ss_conf             0688
Q gi|254780497|r  297 EGRV  300 (324)
Q Consensus       297 ~g~l  300 (324)
T Consensus       122 ~GGf  125 (331)
T TIGR02845       122 DGGF  125 (331)
T ss_pred             HCCC
T ss_conf             3200