HHsearch alignment for GI: 254780497 and conserved domain: TIGR03150
>TIGR03150 fabF 3-oxoacyl-[acyl-carrier-protein] synthase 2. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.63 E-value=6.8e-14 Score=108.44 Aligned_cols=297 Identities=20% Similarity=0.286 Sum_probs=166.8
Q ss_pred CEEEEEEEEEECCCCEECHHHHHH-HHC-CCH-HHHHH--CCCCCEEE---EE--CCCC-----------CHHHHHHHHH
Q ss_conf 226999999964984117889998-809-998-78110--24751889---82--8988-----------9999999999
Q gi|254780497|r 2 IRSTVRGIGLSLPRRVLSNSDLES-IVD-TSD-GWIKR--RVGISRRH---IA--GKDE-----------TTASLGEAAA 60 (324)
Q Consensus 2 ~~~~I~~~g~ylP~~~v~~~el~~-~~~-~~~-~~i~~--~~GI~~R~---~~--~~~e-----------~~~~la~~Aa 60 (324)
T Consensus 1 rrVaItG~g~~~P~g~-~~~~~w~~L~~g~s~i~~~~~~d~~~~~~~~~g~v~~fd~~~~i~~~~a~~~dp~~~l~l~aa 79 (407)
T TIGR03150 1 RRVVVTGLGAVTPLGN-GVEEFWENLLAGKSGIGPITRFDASDLPVKIAGEVKDFDPEDYIDKKEARRMDRFIQYALAAA 79 (407)
T ss_pred CEEEEEECEEECCCCC-CHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEECCCCHHHCCCHHHHHHCCHHHHHHHHHH
T ss_conf 9399984677897979-999999999739974443687786468775677727889466589999975199999999999
Q ss_pred HHHHHHHCCCCCCCC----EEEEECCCC-----------------CCC----CCC-----CCCCHHHHHHCCCCCCCCCC
Q ss_conf 999974021235443----366501223-----------------345----898-----53100112202686444421
Q gi|254780497|r 61 RDALHHAEMSVDDID----LIIVATSTP-----------------DQT----FPS-----TAVNIQNRLGMKRGFAFDMQ 110 (324)
Q Consensus 61 ~~al~~a~~~~~~Id----~ii~~s~~~-----------------~~~----~p~-----~a~~i~~~LGl~~~~~~di~ 110 (324)
T Consensus 80 ~~Al~dAG~~~~~~~~~~~gv~~gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~is~~~~l~-Gp~~tv~ 158 (407)
T TIGR03150 80 KEAVEDSGLDIEEEDAERVGVIVGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAK-GPNHAVV 158 (407)
T ss_pred HHHHHHCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCC
T ss_conf 999986399844528664599992576745779999999985384445854015766258999999985999-9644644
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC-CC---------------------CCC-CCCCCCCCCCCCCCCEEEE
Q ss_conf 012200346788899896415565316763022-43---------------------222-4566323234544312344
Q gi|254780497|r 111 AVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTF-SR---------------------IVD-WSDRSTCVLFGDGAGALIL 167 (324)
Q Consensus 111 ~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~-S~---------------------~~d-~~d~~~~~lfGDGAaA~ll 167 (324)
T Consensus 159 taCsSsl~Al~~A~~~i~~G~~d~aivGG~~~~l~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~a~G~v~gEGa~~vvL 238 (407)
T TIGR03150 159 TACATGTHAIGDAFRLIQYGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDRDGFVMGEGAGVLVL 238 (407)
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 44389999999999998739854655037443579899999998877730678987776542247997445484578740
Q ss_pred ECCCCCCCCCCC--CCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 026544654344--541012320355555617754876544433200103202444557777777888898740010001
Q gi|254780497|r 168 EGVEVKGSSMAD--TGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENI 245 (324)
Q Consensus 168 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~di 245 (324)
T Consensus 239 e~~~~A~~~g~~I~a~i~g~g~~~d~~~----------~t~-----~~p~~--------~~~~~~i~~al~~agi~~~~I 295 (407)
T TIGR03150 239 EELEHAKARGAKIYAEIVGYGMSGDAYH----------ITA-----PAPEG--------EGAARAMRAALKDAGINPEDV 295 (407)
T ss_pred CCHHHHHHCCCEEEEEEEEEEEECCCCC----------CCC-----CCCCC--------HHHHHHHHHHHHHHCCCCCCE
T ss_conf 6699998779968999821055015887----------646-----59981--------678889999999868998633
Q ss_pred CCCCCCCCCHHH-----HHHHHHHCCCCHHHH-H-HHHHHHCCCHHHHHHHHHHH---HHHCCCCCC-------------
Q ss_conf 210244444158-----999999719787673-3-65865193301269999999---998068899-------------
Q gi|254780497|r 246 DWFVPHQANWRI-----INSIVDKMKIPFDKV-I-VTVDIHGNTSAASIPLALAV---AVKEGRVKK------------- 302 (324)
Q Consensus 246 d~~~~Hq~~~~~-----~~~~~~~lgl~~e~~-~-~~~~~~Gn~~sas~~~~L~~---~~~~g~l~~------------- 302 (324)
T Consensus 296 ~yIe~Hgtgt~~~D~~E~~al~~~fg~~~~~~~i~S~K~~~GH~~~AaG~~~lik~~l~l~~~~ipp~~n~~~~~~~~~~ 375 (407)
T TIGR03150 296 DYINAHGTSTPLGDKAETKAIKRVFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIFTVLAIRDGVVPPTINLDNPDPECDL 375 (407)
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 49997368787769999999999862568986578855554314899999999999999825963898998999999984
Q ss_pred -----------CCEEEEEEECCCCCEEEEEEE
Q ss_conf -----------989999997145014568786
Q gi|254780497|r 303 -----------GDCLLLEAMGGGFTSGTVLLR 323 (324)
Q Consensus 303 -----------Gd~vll~~~G~G~s~~a~llr 323 (324)
T Consensus 376 ~~v~~~~~~~~~~~al~~sfGfGG~Na~~vl~ 407 (407)
T TIGR03150 376 DYVPNEARERKIDYALSNSFGFGGHNASLVFK 407 (407)
T ss_pred CCCCCCCCCCCCCEEEEECCCCCCEEEEEEEC
T ss_conf 51889886788899999672367354899969