HHsearch alignment for GI: 254780497 and conserved domain: cd00826
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.57 E-value=9.9e-14 Score=107.40 Aligned_cols=98 Identities=15% Similarity=0.162 Sum_probs=80.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHC-CCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 988999999999999997402123544336650122334589853100112202-6864444210122003467888998
Q gi|254780497|r 48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGM-KRGFAFDMQAVCSGFVYAVTTADSY 126 (324)
Q Consensus 48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl-~~~~~~di~~~C~~~~~al~~A~~l 126 (324)
T Consensus 19 ~~~~a~eL~~~ai~~al~~agi~~~~Id~vi~G~~~~~g~g~n~ar~~~l~ag~~~~vp~~tV~~~CaSG~~Ai~~A~~~ 98 (393)
T cd00826 19 ANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQEAPAIGMNNLCGSGLRALALAMQL 98 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf 78999999999999999982969899898999925875555419999999759998997688768478999999999999
Q ss_pred HHHCCCCCCEEEEECCCCC
Q ss_conf 9641556531676302243
Q gi|254780497|r 127 IRSGVVRRVMVIGSDTFSR 145 (324)
Q Consensus 127 i~~g~~~~~Lvv~~e~~S~ 145 (324)
T Consensus 99 I~sG~~dvvlagGvEsms~ 117 (393)
T cd00826 99 IAGGDANCILAGGFEKMET 117 (393)
T ss_pred HHCCCCCEEEEEEEEECCC
T ss_conf 9769999899950550676