HHsearch alignment for GI: 254780497 and conserved domain: cd00826
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=91.69 E-value=0.71 Score=25.37 Aligned_cols=43 Identities=16% Similarity=0.191 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH
Q ss_conf 7778888987400100012102444441589999997197876
Q gi|254780497|r 228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFD 270 (324)
Q Consensus 228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e 270 (324)
T Consensus 272 ~~A~~~al~~aGl~~~Did~~Ei~eaFa~~~l~~~e~lg~~~~ 314 (393)
T cd00826 272 IEAARKALEKAGLGIGDLDLIEAHDAFAANACATNEALGLCPE 314 (393)
T ss_pred HHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCC
T ss_conf 9999999998299800166456324234999999998098912