HHsearch alignment for GI: 254780497 and conserved domain: pfam00109
>pfam00109 ketoacyl-synt Beta-ketoacyl synthase, N-terminal domain. The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. The N-terminal domain contains most of the structures involved in dimer formation and also the active site cysteine.
Probab=99.08 E-value=9.2e-10 Score=82.06 Aligned_cols=167 Identities=22% Similarity=0.325 Sum_probs=104.3
Q ss_pred EEEEEEEEEECCCCEECHHHHHHHH--CCC------HHH--HH--HCCCCCEE-EEECCC------------CCHHHHHH
Q ss_conf 2699999996498411788999880--999------878--11--02475188-982898------------89999999
Q gi|254780497|r 3 RSTVRGIGLSLPRRVLSNSDLESIV--DTS------DGW--IK--RRVGISRR-HIAGKD------------ETTASLGE 57 (324)
Q Consensus 3 ~~~I~~~g~ylP~~~v~~~el~~~~--~~~------~~~--i~--~~~GI~~R-~~~~~~------------e~~~~la~ 57 (324)
T Consensus 3 ~VvITG~G~vtp~G~-~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 81 (243)
T pfam00109 3 PVAITGMGCRFPGGV-GPEEFWELLLAGRDAIREFPADLSGLYPPSRVAGEIYGFDFDAAFFGISPREAEAMDPQQRLAL 81 (243)
T ss_pred CEEEECCEEECCCCC-CHHHHHHHHHCCCCEEEECCCHHHHCCCCCCCCEECCCCCCCHHHCCCCHHHHHHCCHHHHHHH
T ss_conf 999986688997989-9999999998599888746950644479876010146778781115989999985499999999
Q ss_pred HHHHHHHHHHCCCCCCCC-----EEEEECCCCC--------------CC--------CCC-CCCCHHHHHHCCCCCCCCC
Q ss_conf 999999974021235443-----3665012233--------------45--------898-5310011220268644442
Q gi|254780497|r 58 AAARDALHHAEMSVDDID-----LIIVATSTPD--------------QT--------FPS-TAVNIQNRLGMKRGFAFDM 109 (324)
Q Consensus 58 ~Aa~~al~~a~~~~~~Id-----~ii~~s~~~~--------------~~--------~p~-~a~~i~~~LGl~~~~~~di 109 (324)
T Consensus 82 ~aa~~Al~dAGl~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g~~-Gp~~t~ 160 (243)
T pfam00109 82 EAAWEALEDAGLDPASLRGSDRTGVFVGSGSGDYAELQALDSAGGPRRGSPYLTGAWMPSVAAGRISYRLGLR-GPSVTV 160 (243)
T ss_pred HHHHHHHHHCCCCHHHCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCC-CCCCCC
T ss_conf 9999999984998467278872899998647648999976303674334641105645117888998674157-986466
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC-CC----------CC-------CCCCC-CCCCCCCCCCCEEEEECC
Q ss_conf 1012200346788899896415565316763022-43----------22-------24566-323234544312344026
Q gi|254780497|r 110 QAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTF-SR----------IV-------DWSDR-STCVLFGDGAGALILEGV 170 (324)
Q Consensus 110 ~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~-S~----------~~-------d~~d~-~~~~lfGDGAaA~ll~~~ 170 (324)
T Consensus 161 ~~ACaSg~~AI~~A~~~I~~G~~d~~i~Gg~~~~~~~~~~~~f~~~~a~~~~~~~~rpfd~~~~G~v~GEGaa~lvLE~~ 240 (243)
T pfam00109 161 DTACSSSLVALHAAVRSIRRGECDLALAGGVEAPLTPGGFAGFSAAGALLSPDGPCKAFDPFADGFVRGEGVGAVLLKEL 240 (243)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEH
T ss_conf 55207899999999975336983879997841556978999999747857979998887899996553614998999767
Q ss_pred C
Q ss_conf 5
Q gi|254780497|r 171 E 171 (324)
Q Consensus 171 ~ 171 (324)
T Consensus 241 e 241 (243)
T pfam00109 241 S 241 (243)
T ss_pred H
T ss_conf 6