HHsearch alignment of GI: 254780498 and MMDB domain: 1yco_A_1-94_247-279
>1yco_A (A:1-94,A:247-279) Branched-chain phosphotransacylase; structural genomics, protein structure initiative, PSI, PTB, nysgxrc; 2.40A {Enterococcus faecalis V583}
Probab=97.06 E-value=0.0013 Score=42.28 Aligned_cols=97 Identities=20% Similarity=0.237 Sum_probs=70.2
Q ss_pred EEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEE-EEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHC
Q ss_conf 2399997468777817779999999985799179-997898999999862697515579977852017783067999713
Q gi|254780498|r 12 VDTISLDLMGGDLGARDLILGASKFLEAHPRIRF-LMYGDAKVCLPILDSHPLLKERSCFHHCEVSIAMDERPADALRRG 90 (364)
Q Consensus 12 m~kIAVDaMGGD~~P~~vi~Ga~~al~~~~~i~i-iLvGdee~I~~~l~~~~~~~~ri~Ii~a~~vI~mde~P~~AlR~k 90 (364)
|+|+||= ...| ..+++++..+.++. -+++ +|+||+++|+.. .+.++|+|+++. .
T Consensus 1 ~krvAVa-~a~D---~~~L~Av~~A~e~g-i~~p~iLvGd~~~I~~~-------a~~~eiI~~~~~-------~------ 55 (127)
T 1yco_A 1 MITVSIA-GGSQ---PEILQLVKKALKEA-EQPLQFIVFDTNENLDT-------ENLWKYVHCSDE-------A------ 55 (127)
T ss_dssp CEEEEEE-TCCS---HHHHHHHHHHHHHC-CSCEEEEEEESSCCCCS-------SCCSEEEECSSH-------H------
T ss_pred CEEEEEC-CCCC---HHHHHHHHHHHHCC-CCCCEEEECCCHHHCCC-------CCCCEEECCCCC-------H------
T ss_conf 9699991-6899---89999999999769-98877994282330630-------028779879995-------9------
Q ss_pred CCCHHHHHHHHHHHCCCCEEEEEEC--CHHHHHHHHHHHCCCCCCCCCCCHH
Q ss_conf 7642799999998549953999706--4267888887532255676322001
Q gi|254780498|r 91 RNVSSMWRAIEAVKKNQAASVVTAG--NTGALIAMARLCLSRISGVDRPSLA 140 (364)
Q Consensus 91 K~~SSm~~a~~lvk~g~aDa~VSaG--nTGA~la~a~~~lg~i~Gv~RPala 140 (364)
..-..|+++|++|+||.+.- | +|..+|.. +|.+-.|+.-|-+-
T Consensus 56 ---eAA~~AV~lVr~G~Ad~LMK-G~i~T~~lLka---VL~ke~GLk~pvvl 100 (127)
T 1yco_A 56 ---AVAQEAVSLVATGQAQILLK-GIIQTHTLLKE---MLKSEHQLKVPVVL 100 (127)
T ss_dssp ---HHHHHHHHHHHSTTCSEEEE-CSSCHHHHHHH---HTCTTTCCSSCEEE
T ss_pred ---HHHHHHHHHHHCCCCCEEEE-CCCCCHHHHHH---HHHHHCCCCCCEEE
T ss_conf ---99999999997799877975-89894676667---88862367875798