HHsearch results for GI: 254780498 and protein with PDBid: 1vi1_A
>1vi1_A Fatty acid/phospholipid synthesis protein PLSX; structural genomics, unknown function; HET: MSE; 2.95A {Bacillus subtilis} SCOP: c.77.1.4
Probab=100.00 E-value=0 Score=843.03 Aligned_cols=332 Identities=33% Similarity=0.597 Sum_probs=321.8
Q ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCC
Q ss_conf 39999746877781777999999998579917999789899999986269751557997785201778306799971376
Q gi|254780498|r 13 DTISLDLMGGDLGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKERSCFHHCEVSIAMDERPADALRRGRN 92 (364)
Q Consensus 13 ~kIAVDaMGGD~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~~vI~mde~P~~AlR~kK~ 92 (364)
||||||+||||++|+++|+|+..|++++|+++|+|||++++|+++++++ .+|++|+||+++|+|+|+|+.|+|+||+
T Consensus 3 irIAvDaMGGD~~P~~vv~Ga~~al~~~~~~~i~LvG~e~~i~~~l~~~---~~ri~iv~a~~vI~m~d~p~~alr~kk~ 79 (345)
T 1vi1_A 3 LRIAVDAMGGDHAPKAVIDGVIKGIEAFDDLHITLVGDKTTIESHLTTT---SDRITVLHADEVIEPTDEPVRAVRRKKN 79 (345)
T ss_dssp EEEEEESSCSSSTTHHHHHHHHHHHHHCTTEEEEEEECHHHHHTTCCSC---CTTEEEEECCBCCCTTSCHHHHHHHCTT
T ss_pred EEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHC---CCCEEEEECCCCCCCCCCHHHHHHHCCC
T ss_conf 2999980598668088999999999978897699992899999998536---2663899288740589876899884556
Q ss_pred CHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCC-CEEEEECCCCCCCCHHHHHHHHH
Q ss_conf 42799999998549953999706426788888753225567632200110558898-45998613277789899999999
Q gi|254780498|r 93 VSSMWRAIEAVKKNQAASVVTAGNTGALIAMARLCLSRISGVDRPSLAAFWPTVKG-KCIILDVGATIGSTVSHMVQLSI 171 (364)
Q Consensus 93 ~SSm~~a~~lvk~g~aDa~VSaGnTGA~la~a~~~lg~i~Gv~RPala~~~Pt~~g-~~vllD~GAN~d~~~~~L~qfA~ 171 (364)
||||+|+++||+|++||+||||||||+|+++++++||+|||+||||+++|||.++ +++|||+|||+||+|++|+|||+
T Consensus 80 -SSm~~a~~lvk~g~ada~VSaGnTGAl~a~a~~~l~~i~gi~RPaia~~~Pt~~g~~~~llD~GAN~d~~p~~L~qFA~ 158 (345)
T 1vi1_A 80 -SSMVLMAQEVAENRADACISAGNTGALMTAGLFIVGRIKGIDRPALAPTLPTVSGDGFLLLDVGANVDAKPEHLVQYAI 158 (345)
T ss_dssp -BHHHHHHHHHHTTSCSEEEECSCHHHHHHHHHHTTCBCTTCSSCEEECEECCSSSCCEEEECSSSCSSCCHHHHHHHHH
T ss_pred -CHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHH
T ss_conf -5599999983032467798446438999999987751047555531255456689861797378566779899999999
Q ss_pred HHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHCCCCCCCEEEECCHHHHHHHHH
Q ss_conf 99999998568999658998404555556579999999974024571320023455453245683899755127889999
Q gi|254780498|r 172 LGSFFARSVAGINCPSIGLLNVGTEEIKGNDVLQESARLLRGECCGAFKYKGFIEANDIAKGFVDVIVTEGFSGNIAIKA 251 (364)
Q Consensus 172 mGs~yak~~~~~~~PrVgLLNiG~E~~KG~~~~kea~~LL~~~~~~~~nF~GniEg~~i~~g~~DVvV~DGFtGNi~LKt 251 (364)
||++|+|.++++++|||||||||+|++||++++|+||+||++.. +|||+|||||+|||+|.+||||||||||||+|||
T Consensus 159 mGs~yak~~~g~~~PrVgLLNiG~E~~KG~~~~kea~~lL~~~~--~~nf~GnvEg~di~~g~~DVvV~DGFtGNi~LKt 236 (345)
T 1vi1_A 159 MGSVYSQQVRGVTSPRVGLLNVGTEDKKGNELTKQTFQILKETA--NINFIGNVEARDLLDDVADVVVTDGFTGNVTLKT 236 (345)
T ss_dssp HHHHHHHHTSCCSSCEEEEEESSSSTTCSCHHHHHHHHHHHSCT--TSEEEEEEEGGGGGGTSCSEEECCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCC--CCCEEEECCCCCCCCCCCEEEEECCCHHHHHHHH
T ss_conf 99999999559999947776356656676699999999887518--9615875576656789940999788235999985
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 88889999999998632220889999998999999997269687087467421614898388998689999999999999
Q gi|254780498|r 252 AEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVKEGFDPRNFNGGVLLGVDGLVVKGHGSSDAKSIFNVLGIAHNMS 331 (364)
Q Consensus 252 ~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~~~~d~~~~gGa~llGl~g~vik~HG~s~~~a~~~ai~~a~~~~ 331 (364)
+||+++++++++|++++++++++++++++++.|++++++|||++|||||||||||+||||||+|+++||+|||++|.+++
T Consensus 237 ~EG~~~~i~~~lk~~~~~~~~~k~~~ll~~~~l~~l~~~~D~~~~gGA~lLGl~givik~HGsS~~~ai~nAI~~A~~~~ 316 (345)
T 1vi1_A 237 LEGSALSIFKMMRDVMTSTLTSKLAAAVLKPKLKEMKMKMEYSNYGGASLFGLKAPVIKAHGSSDSNAVFRAIRQAREMV 316 (345)
T ss_dssp HHHHHHHHHHHHHHHHTTTC-------CCHHHHHHHHHHHCGGGSCCEEEETBSSCEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf 52067899999999986548888899987999999997579120799889737810899389999899999999999999
Q ss_pred HCCHHHHHHHHHHHHHHHH
Q ss_conf 6070689999999998767
Q gi|254780498|r 332 QNGFIDMVKDDMQRVRDSL 350 (364)
Q Consensus 332 ~~~~~~~i~~~~~~~~~~~ 350 (364)
+++++++|++++++.++..
T Consensus 317 ~~~l~~~I~~~l~~~~~~~ 335 (345)
T 1vi1_A 317 SQNVAALIQEEVKEEKTDE 335 (345)
T ss_dssp HTTHHHHHHHHTSHHHHTC
T ss_pred HHHHHHHHHHHHHHHCCCC
T ss_conf 9668999999997511543