HHsearch alignment for GI: 254780500 and conserved domain: PRK11251

>PRK11251 DNA-binding transcriptional activator OsmE; Provisional.
Probab=97.48  E-value=0.00043  Score=45.10  Aligned_cols=96  Identities=16%  Similarity=0.181  Sum_probs=65.3

Q ss_pred             HHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCHHCCC
Q ss_conf             99999999998435554210135003878886404899999999983785212244677530488872100000001012
Q gi|254780500|r   19 KALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLS   98 (159)
Q Consensus        19 k~i~~~l~~~~~~~c~~~~~~~G~~id~~~i~~i~~g~tk~~V~~~LG~Ps~~~~f~~n~~~~~YYi~~k~~~~~~af~~   98 (159)
T Consensus         4 ~~l~aaa~~~~LaGCt~~d~~~~~~~-ePlVkdV~~GMT~qqV~~igG~Pss~~~~~~~~GtC~~Yi-----------L~   71 (109)
T PRK11251          4 GILSAAAVLTMLAGCTAYDRNPVQYV-EPVVKDVKKGMTRQQVLQIGGKPSSEVSMIHARGTCQTYI-----------LG   71 (109)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCHHHHC-CHHHHHHHCCCCHHHHHHHCCCCCCEEEEECCCCCCCEEE-----------EE
T ss_conf             58899999999971447767813431-5069888747579999985499864178860785220037-----------32


Q ss_pred             CEEEEEEEEEEEECCCCCEEEEEECCCC
Q ss_conf             1111357899999899868432110434
Q gi|254780500|r   99 PKIMEYIVLKITFGEKGVVSSVSMERLP  126 (159)
Q Consensus        99 pkvier~Vl~I~FD~~g~V~nI~~~~L~  126 (159)
T Consensus        72 ~~dGk~q~YfVsfD~tG~V~~~GF~TC~   99 (109)
T PRK11251         72 NRDGKAQTYFVSFDDTGHVDNSGFQTCA   99 (109)
T ss_pred             CCCCCEEEEEEEECCCCCCCCCCHHHHH
T ss_conf             4689615579997789858351220588