BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780500|ref|YP_003064913.1| hypothetical protein
CLIBASIA_01935 [Candidatus Liberibacter asiaticus str. psy62]
(159 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780500|ref|YP_003064913.1| hypothetical protein CLIBASIA_01935 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040177|gb|ACT56973.1| hypothetical protein CLIBASIA_01935 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 159
Score = 319 bits (817), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 159/159 (100%), Positives = 159/159 (100%)
Query: 1 MKKILFLNNFFFGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSH 60
MKKILFLNNFFFGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSH
Sbjct: 1 MKKILFLNNFFFGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSH 60
Query: 61 VIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV 120
VIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV
Sbjct: 61 VIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV 120
Query: 121 SMERLPNRRFNPNPHTIPAPIQTADGFLRRLLNPNGRSA 159
SMERLPNRRFNPNPHTIPAPIQTADGFLRRLLNPNGRSA
Sbjct: 121 SMERLPNRRFNPNPHTIPAPIQTADGFLRRLLNPNGRSA 159
>gi|315122313|ref|YP_004062802.1| hypothetical protein CKC_02825 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495715|gb|ADR52314.1| hypothetical protein CKC_02825 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 166
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/160 (48%), Positives = 101/160 (63%), Gaps = 6/160 (3%)
Query: 4 ILFLNNFFFGKLSFNKALFIIVIGLVV--DYHVSYG---SISGASLDMSAISLVSQGSSR 58
+L LNNF F L NK + I ++ + + HVS+G S+ G LD + +SL+ + SSR
Sbjct: 1 MLLLNNFLFKHLFLNKVILIALLLTISMGNLHVSHGEDNSVGGVVLDQALLSLIHRQSSR 60
Query: 59 SHVIESLGSPSFSILHNGNRS-QSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVV 117
HVI++LGSPSF+I N QSFYYVSQKKK FP FL P I VLKI FG++G+V
Sbjct: 61 EHVIQTLGSPSFTIFDPHNYGMQSFYYVSQKKKIFPFHFLRPTITNRTVLKIVFGKEGLV 120
Query: 118 SSVSMERLPNRRFNPNPHTIPAPIQTADGFLRRLLNPNGR 157
S +S++ L +RRFNPN H PI F RLLNP+ +
Sbjct: 121 SKISIQSLKDRRFNPNQHETTVPITKESDFFDRLLNPDKK 160
>gi|227821541|ref|YP_002825511.1| putative outer membrane protein [Sinorhizobium fredii NGR234]
gi|227340540|gb|ACP24758.1| putative outer membrane protein [Sinorhizobium fredii NGR234]
Length = 168
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 67/117 (57%), Gaps = 6/117 (5%)
Query: 41 GASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPK 100
G +D ++LV GSSR V+ SLG+PS + + ++ FYY+SQK+K PV F+ PK
Sbjct: 42 GYVVDQETLNLVPVGSSREQVLLSLGTPSTTATFD---NEVFYYISQKRKR-PVAFMKPK 97
Query: 101 IMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTADGFLRRLLNPNG 156
+++ +L + F ++GVVS ++ + + + F+ T P + FL +LL G
Sbjct: 98 LIDQSILAVYFDKEGVVSQLAHYTMKDGKVFDMLSRTTPTGGKETS-FLGQLLTGPG 153
>gi|15964972|ref|NP_385325.1| hypothetical protein SMc01781 [Sinorhizobium meliloti 1021]
gi|307301043|ref|ZP_07580812.1| SmpA/OmlA domain protein [Sinorhizobium meliloti BL225C]
gi|307317777|ref|ZP_07597215.1| SmpA/OmlA domain protein [Sinorhizobium meliloti AK83]
gi|15074151|emb|CAC45798.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
gi|306896539|gb|EFN27287.1| SmpA/OmlA domain protein [Sinorhizobium meliloti AK83]
gi|306903998|gb|EFN34584.1| SmpA/OmlA domain protein [Sinorhizobium meliloti BL225C]
Length = 168
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 79/156 (50%), Gaps = 6/156 (3%)
Query: 2 KKILFLNNFFFGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHV 61
K+ L N G+ +L + + +V G +D ++LV GSSR V
Sbjct: 3 KRYLTTNLKVLGRAVLVASLCTTALSACMSANVGEVLHQGYVVDQETLALVPVGSSREQV 62
Query: 62 IESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVS 121
+ SLG+PS + + ++ FYY+SQ +K PV F+ PKI++ +L + F ++G VS ++
Sbjct: 63 LLSLGTPSTTATFD---NEVFYYISQTRKR-PVAFMKPKIIDQSILAVYFDKEGTVSQLA 118
Query: 122 MERLPNRR-FNPNPHTIPAPIQTADGFLRRLLNPNG 156
+ + + F+ T P + + FL +LL+ G
Sbjct: 119 HYTMKDGKVFDMLTRTTPTGGKESS-FLGQLLSGPG 153
>gi|150396049|ref|YP_001326516.1| SmpA/OmlA domain-containing protein [Sinorhizobium medicae WSM419]
gi|150027564|gb|ABR59681.1| SmpA/OmlA domain protein [Sinorhizobium medicae WSM419]
Length = 168
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 6/156 (3%)
Query: 2 KKILFLNNFFFGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHV 61
K+ L N G+ +L + + +V G +D ++LV GSSR V
Sbjct: 3 KRYLTTNLKVLGRAVLVASLCTTALSACMSANVGEVLHQGYVVDQETLALVPVGSSREQV 62
Query: 62 IESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVS 121
+ SLG+PS + + ++ FYY+SQ +K PV F+ PKI++ +L + F ++G VS ++
Sbjct: 63 LLSLGTPSTTATFD---NEVFYYISQTRKR-PVAFMKPKIVDQSILAVYFDKEGTVSQLA 118
Query: 122 MERLPNRR-FNPNPHTIPAPIQTADGFLRRLLNPNG 156
+ + + F+ T P + FL +LL+ G
Sbjct: 119 HYTMKDGKVFDMLSRTTPTGGKETS-FLGQLLSGPG 153
>gi|319784149|ref|YP_004143625.1| SmpA/OmlA domain-containing protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317170037|gb|ADV13575.1| SmpA/OmlA domain-containing protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 170
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 28 LVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQ 87
++ D S G +D AI LV GSSR V+ +LG+PS + + +++FYY+SQ
Sbjct: 35 MIGDLSPSETLTQGYVIDQQAIDLVPVGSSREQVLLALGTPSTTATFD---NEAFYYISQ 91
Query: 88 KKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVS 121
+K + V F P++++ VL + FG G V+ ++
Sbjct: 92 TRKRY-VAFDKPRLIDQHVLAVYFGADGRVTQIA 124
>gi|222085518|ref|YP_002544048.1| hypothetical protein Arad_1765 [Agrobacterium radiobacter K84]
gi|221722966|gb|ACM26122.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 169
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 6/118 (5%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
+G D +++LV GSSR V+ SLG+PS + +G + FYY+SQK+ F+ P
Sbjct: 40 NGYIFDQQSLNLVPVGSSREQVLLSLGTPSTTATFDG---EVFYYISQKRTR-AAAFMKP 95
Query: 100 KIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTADGFLRRLLNPNG 156
K+++ +L I F + G+V + L + R F+ T P + FL+++L G
Sbjct: 96 KLVDQNILAIYFDKDGIVKQEANYTLKDGRVFDMISRTTPTGGRDIT-FLQQILQGGG 152
>gi|239831598|ref|ZP_04679927.1| SmpA/OmlA domain-containing protein [Ochrobactrum intermedium LMG
3301]
gi|239823865|gb|EEQ95433.1| SmpA/OmlA domain-containing protein [Ochrobactrum intermedium LMG
3301]
Length = 171
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G LD +A+ V GSSR V+ +LG+PS + + ++ FYY+SQ K++ +F+ P
Sbjct: 44 EGYVLDQNALDSVPVGSSREQVLLALGTPSTTATFD---NEVFYYISQ-KRYRAAQFMKP 99
Query: 100 KIMEYIVLKITFGEKGVVSSVS 121
KI+E +L I F + G V ++
Sbjct: 100 KIIERQILAIYFDKDGKVEHIA 121
>gi|260460939|ref|ZP_05809189.1| SmpA/OmlA domain protein [Mesorhizobium opportunistum WSM2075]
gi|259033516|gb|EEW34777.1| SmpA/OmlA domain protein [Mesorhizobium opportunistum WSM2075]
Length = 171
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Query: 45 DMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEY 104
D A+ V GSSR V+ +LG+PS + + +++FYY+SQ +K + V F P++++
Sbjct: 52 DQQAVDSVPVGSSREQVLLALGTPSTTATFD---NEAFYYISQTRKRY-VAFDKPRLIDQ 107
Query: 105 IVLKITFGEKGVVSSVS 121
VL + FG+ G V+ ++
Sbjct: 108 KVLAVYFGDDGRVTQIA 124
>gi|153009850|ref|YP_001371065.1| SmpA/OmlA domain-containing protein [Ochrobactrum anthropi ATCC
49188]
gi|151561738|gb|ABS15236.1| SmpA/OmlA domain protein [Ochrobactrum anthropi ATCC 49188]
Length = 174
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 41 GASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPK 100
G LD A+ V GSSR V+ +LG+PS + + ++ FYY+SQ K++ +F+ PK
Sbjct: 48 GYVLDQGALDSVPVGSSREQVLLALGTPSTTATFD---NEVFYYISQ-KRYRAAQFMKPK 103
Query: 101 IMEYIVLKITFGEKGVVSSVS 121
I+E +L I F + G V ++
Sbjct: 104 IIERQILAIYFNKDGKVEHIA 124
>gi|265983875|ref|ZP_06096610.1| SmpA/OmlA domain-containing protein [Brucella sp. 83/13]
gi|264662467|gb|EEZ32728.1| SmpA/OmlA domain-containing protein [Brucella sp. 83/13]
Length = 172
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G LD A+ V GSSR V+ +LG+PS + + ++ FYY+SQ K++ +F+ P
Sbjct: 48 EGYMLDQQALDSVPVGSSREQVLLALGTPSTTATFD---NEVFYYISQ-KRYRAAQFMKP 103
Query: 100 KIMEYIVLKITFGEKGVVSSVS 121
K++E +L I F + G V ++
Sbjct: 104 KVIERQILAIYFNKDGKVEHIA 125
>gi|225627270|ref|ZP_03785307.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|225617275|gb|EEH14320.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
Length = 214
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 41 GASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPK 100
G LD A+ V GSSR V+ +LG+PS + + ++ FYY+SQ K++ +F+ PK
Sbjct: 91 GYVLDQQALDSVPVGSSREQVLLALGTPSTTATFD---NEVFYYISQ-KRYRAAQFMKPK 146
Query: 101 IMEYIVLKITFGEKGVVSSVS 121
++E +L I F + G V ++
Sbjct: 147 VIERQILAIYFNKDGKVEHIA 167
>gi|306838199|ref|ZP_07471053.1| SmpA/OmlA domain-containing protein [Brucella sp. NF 2653]
gi|306406708|gb|EFM62933.1| SmpA/OmlA domain-containing protein [Brucella sp. NF 2653]
Length = 168
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G LD A+ V GSSR V+ +LG+PS + + ++ FYY+SQ K++ +F+ P
Sbjct: 44 EGYMLDQQALDSVPVGSSREQVLLALGTPSTTATFD---NEVFYYISQ-KRYRAAQFMKP 99
Query: 100 KIMEYIVLKITFGEKGVVSSVS 121
K++E +L I F + G V ++
Sbjct: 100 KVIERQILAIYFNKDGKVEHIA 121
>gi|237815212|ref|ZP_04594210.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|237790049|gb|EEP64259.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
Length = 214
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 41 GASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPK 100
G LD A+ V GSSR V+ +LG+PS + + ++ FYY+SQ K++ +F+ PK
Sbjct: 91 GYVLDQQALDSVPVGSSREQVLLALGTPSTTATFD---NEVFYYISQ-KRYRAAQFMKPK 146
Query: 101 IMEYIVLKITFGEKGVVSSVS 121
++E +L I F + G V ++
Sbjct: 147 VIERQILAIYFNKDGKVEHIA 167
>gi|254718890|ref|ZP_05180701.1| hypothetical protein Bru83_05014 [Brucella sp. 83/13]
Length = 167
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G LD A+ V GSSR V+ +LG+PS + + ++ FYY+SQ K++ +F+ P
Sbjct: 43 EGYMLDQQALDSVPVGSSREQVLLALGTPSTTATFD---NEVFYYISQ-KRYRAAQFMKP 98
Query: 100 KIMEYIVLKITFGEKGVVSSVS 121
K++E +L I F + G V ++
Sbjct: 99 KVIERQILAIYFNKDGKVEHIA 120
>gi|62289724|ref|YP_221517.1| hypothetical protein BruAb1_0788 [Brucella abortus bv. 1 str.
9-941]
gi|82699653|ref|YP_414227.1| SmpA/OmlA [Brucella melitensis biovar Abortus 2308]
gi|260545523|ref|ZP_05821264.1| SmpA/OmlA protein [Brucella abortus NCTC 8038]
gi|260754528|ref|ZP_05866876.1| SmpA/OmlA domain-containing protein [Brucella abortus bv. 6 str.
870]
gi|260757749|ref|ZP_05870097.1| SmpA/OmlA domain-containing protein [Brucella abortus bv. 4 str.
292]
gi|260761574|ref|ZP_05873917.1| SmpA/OmlA domain-containing protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883556|ref|ZP_05895170.1| SmpA/OmlA domain-containing protein [Brucella abortus bv. 9 str.
C68]
gi|261213776|ref|ZP_05928057.1| SmpA/OmlA domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
gi|297248129|ref|ZP_06931847.1| SmpA/OmlA domain-containing protein [Brucella abortus bv. 5 str.
B3196]
gi|62195856|gb|AAX74156.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82615754|emb|CAJ10750.1| SmpA/OmlA [Brucella melitensis biovar Abortus 2308]
gi|260096930|gb|EEW80805.1| SmpA/OmlA protein [Brucella abortus NCTC 8038]
gi|260668067|gb|EEX55007.1| SmpA/OmlA domain-containing protein [Brucella abortus bv. 4 str.
292]
gi|260672006|gb|EEX58827.1| SmpA/OmlA domain-containing protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260674636|gb|EEX61457.1| SmpA/OmlA domain-containing protein [Brucella abortus bv. 6 str.
870]
gi|260873084|gb|EEX80153.1| SmpA/OmlA domain-containing protein [Brucella abortus bv. 9 str.
C68]
gi|260915383|gb|EEX82244.1| SmpA/OmlA domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
gi|297175298|gb|EFH34645.1| SmpA/OmlA domain-containing protein [Brucella abortus bv. 5 str.
B3196]
Length = 172
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G LD A+ V GSSR V+ +LG+PS + + ++ FYY+SQ K++ +F+ P
Sbjct: 48 EGYVLDQQALDSVPVGSSREQVLLALGTPSTTATFD---NEVFYYISQ-KRYRAAQFMKP 103
Query: 100 KIMEYIVLKITFGEKGVVSSVS 121
K++E +L I F + G V ++
Sbjct: 104 KVIERQILAIYFNKDGKVEHIA 125
>gi|17987467|ref|NP_540101.1| small protein A [Brucella melitensis bv. 1 str. 16M]
gi|254701546|ref|ZP_05163374.1| hypothetical protein Bsuib55_11915 [Brucella suis bv. 5 str. 513]
gi|254704094|ref|ZP_05165922.1| hypothetical protein Bsuib36_09214 [Brucella suis bv. 3 str. 686]
gi|254707005|ref|ZP_05168833.1| hypothetical protein BpinM_08465 [Brucella pinnipedialis
M163/99/10]
gi|254709886|ref|ZP_05171697.1| hypothetical protein BpinB_06365 [Brucella pinnipedialis B2/94]
gi|254713887|ref|ZP_05175698.1| hypothetical protein BcetM6_11144 [Brucella ceti M644/93/1]
gi|254717056|ref|ZP_05178867.1| hypothetical protein BcetM_11658 [Brucella ceti M13/05/1]
gi|256031379|ref|ZP_05444993.1| hypothetical protein BpinM2_12132 [Brucella pinnipedialis
M292/94/1]
gi|256044458|ref|ZP_05447362.1| hypothetical protein Bmelb1R_08168 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256113302|ref|ZP_05454170.1| hypothetical protein Bmelb3E_11337 [Brucella melitensis bv. 3 str.
Ether]
gi|256159500|ref|ZP_05457268.1| hypothetical protein BcetM4_11092 [Brucella ceti M490/95/1]
gi|256254786|ref|ZP_05460322.1| hypothetical protein BcetB_10909 [Brucella ceti B1/94]
gi|260168512|ref|ZP_05755323.1| SmpA/OmlA domain-containing protein [Brucella sp. F5/99]
gi|306841983|ref|ZP_07474657.1| small protein A [Brucella sp. BO2]
gi|306843716|ref|ZP_07476316.1| small protein A [Brucella sp. BO1]
gi|17983162|gb|AAL52365.1| small protein a [Brucella melitensis bv. 1 str. 16M]
gi|306276026|gb|EFM57735.1| small protein A [Brucella sp. BO1]
gi|306287911|gb|EFM59328.1| small protein A [Brucella sp. BO2]
Length = 167
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 41 GASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPK 100
G LD A+ V GSSR V+ +LG+PS + + ++ FYY+SQ K++ +F+ PK
Sbjct: 44 GYVLDQQALDSVPVGSSREQVLLALGTPSTTATFD---NEVFYYISQ-KRYRAAQFMKPK 99
Query: 101 IMEYIVLKITFGEKGVVSSVS 121
++E +L I F + G V ++
Sbjct: 100 VIERQILAIYFNKDGKVEHIA 120
>gi|161618739|ref|YP_001592626.1| SmpA/OmlA domain-containing protein [Brucella canis ATCC 23365]
gi|163843043|ref|YP_001627447.1| SmpA/OmlA domain-containing protein [Brucella suis ATCC 23445]
gi|225852288|ref|YP_002732521.1| SmpA/OmlA domain-containing protein [Brucella melitensis ATCC
23457]
gi|161335550|gb|ABX61855.1| SmpA/OmlA domain protein [Brucella canis ATCC 23365]
gi|163673766|gb|ABY37877.1| SmpA/OmlA domain protein [Brucella suis ATCC 23445]
gi|225640653|gb|ACO00567.1| SmpA/OmlA domain protein [Brucella melitensis ATCC 23457]
gi|326408792|gb|ADZ65857.1| SmpA/OmlA domain-containing protein [Brucella melitensis M28]
gi|326538510|gb|ADZ86725.1| SmpA/OmlA domain protein [Brucella melitensis M5-90]
Length = 168
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 41 GASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPK 100
G LD A+ V GSSR V+ +LG+PS + + ++ FYY+SQ K++ +F+ PK
Sbjct: 45 GYVLDQQALDSVPVGSSREQVLLALGTPSTTATFD---NEVFYYISQ-KRYRAAQFMKPK 100
Query: 101 IMEYIVLKITFGEKGVVSSVS 121
++E +L I F + G V ++
Sbjct: 101 VIERQILAIYFNKDGKVEHIA 121
>gi|23501659|ref|NP_697786.1| hypothetical protein BR0772 [Brucella suis 1330]
gi|256369204|ref|YP_003106712.1| SmpA/OmlA domain-containing protein [Brucella microti CCM 4915]
gi|260563809|ref|ZP_05834295.1| SmpA/OmlA family protein [Brucella melitensis bv. 1 str. 16M]
gi|260566658|ref|ZP_05837128.1| SmpA/OmlA family protein [Brucella suis bv. 4 str. 40]
gi|261218866|ref|ZP_05933147.1| SmpA/OmlA domain-containing protein [Brucella ceti M13/05/1]
gi|261221966|ref|ZP_05936247.1| SmpA/OmlA domain-containing protein [Brucella ceti B1/94]
gi|261314472|ref|ZP_05953669.1| SmpA/OmlA domain-containing protein [Brucella pinnipedialis
M163/99/10]
gi|261317428|ref|ZP_05956625.1| SmpA/OmlA domain-containing protein [Brucella pinnipedialis B2/94]
gi|261321635|ref|ZP_05960832.1| SmpA/OmlA domain-containing protein [Brucella ceti M644/93/1]
gi|261752095|ref|ZP_05995804.1| SmpA/OmlA domain-containing protein [Brucella suis bv. 5 str. 513]
gi|261754754|ref|ZP_05998463.1| SmpA/OmlA domain-containing protein [Brucella suis bv. 3 str. 686]
gi|261757982|ref|ZP_06001691.1| SmpA/OmlA family protein [Brucella sp. F5/99]
gi|265988465|ref|ZP_06101022.1| SmpA/OmlA domain-containing protein [Brucella pinnipedialis
M292/94/1]
gi|265990879|ref|ZP_06103436.1| SmpA/OmlA domain-containing protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265994715|ref|ZP_06107272.1| SmpA/OmlA domain-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|265997929|ref|ZP_06110486.1| SmpA/OmlA domain-containing protein [Brucella ceti M490/95/1]
gi|265999512|ref|ZP_05466739.2| SmpA/OmlA [Brucella melitensis bv. 2 str. 63/9]
gi|294852133|ref|ZP_06792806.1| hypothetical protein BAZG_01050 [Brucella sp. NVSL 07-0026]
gi|23347579|gb|AAN29701.1| conserved hypothetical protein [Brucella suis 1330]
gi|255999364|gb|ACU47763.1| SmpA/OmlA domain-containing protein [Brucella microti CCM 4915]
gi|260153825|gb|EEW88917.1| SmpA/OmlA family protein [Brucella melitensis bv. 1 str. 16M]
gi|260156176|gb|EEW91256.1| SmpA/OmlA family protein [Brucella suis bv. 4 str. 40]
gi|260920550|gb|EEX87203.1| SmpA/OmlA domain-containing protein [Brucella ceti B1/94]
gi|260923955|gb|EEX90523.1| SmpA/OmlA domain-containing protein [Brucella ceti M13/05/1]
gi|261294325|gb|EEX97821.1| SmpA/OmlA domain-containing protein [Brucella ceti M644/93/1]
gi|261296651|gb|EEY00148.1| SmpA/OmlA domain-containing protein [Brucella pinnipedialis B2/94]
gi|261303498|gb|EEY06995.1| SmpA/OmlA domain-containing protein [Brucella pinnipedialis
M163/99/10]
gi|261737966|gb|EEY25962.1| SmpA/OmlA family protein [Brucella sp. F5/99]
gi|261741848|gb|EEY29774.1| SmpA/OmlA domain-containing protein [Brucella suis bv. 5 str. 513]
gi|261744507|gb|EEY32433.1| SmpA/OmlA domain-containing protein [Brucella suis bv. 3 str. 686]
gi|262552397|gb|EEZ08387.1| SmpA/OmlA domain-containing protein [Brucella ceti M490/95/1]
gi|262765828|gb|EEZ11617.1| SmpA/OmlA domain-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|263001663|gb|EEZ14238.1| SmpA/OmlA domain-containing protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263094451|gb|EEZ18273.1| SmpA/OmlA [Brucella melitensis bv. 2 str. 63/9]
gi|264660662|gb|EEZ30923.1| SmpA/OmlA domain-containing protein [Brucella pinnipedialis
M292/94/1]
gi|294820722|gb|EFG37721.1| hypothetical protein BAZG_01050 [Brucella sp. NVSL 07-0026]
Length = 172
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 41 GASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPK 100
G LD A+ V GSSR V+ +LG+PS + + ++ FYY+SQ K++ +F+ PK
Sbjct: 49 GYVLDQQALDSVPVGSSREQVLLALGTPSTTATFD---NEVFYYISQ-KRYRAAQFMKPK 104
Query: 101 IMEYIVLKITFGEKGVVSSVS 121
++E +L I F + G V ++
Sbjct: 105 VIERQILAIYFNKDGKVEHIA 125
>gi|189023973|ref|YP_001934741.1| SmpA/OmlA [Brucella abortus S19]
gi|254689033|ref|ZP_05152287.1| SmpA/OmlA [Brucella abortus bv. 6 str. 870]
gi|254693516|ref|ZP_05155344.1| SmpA/OmlA [Brucella abortus bv. 3 str. Tulya]
gi|254697168|ref|ZP_05158996.1| SmpA/OmlA [Brucella abortus bv. 2 str. 86/8/59]
gi|254730064|ref|ZP_05188642.1| SmpA/OmlA [Brucella abortus bv. 4 str. 292]
gi|256257283|ref|ZP_05462819.1| SmpA/OmlA [Brucella abortus bv. 9 str. C68]
gi|189019545|gb|ACD72267.1| SmpA/OmlA [Brucella abortus S19]
Length = 167
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 41 GASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPK 100
G LD A+ V GSSR V+ +LG+PS + + ++ FYY+SQ K++ +F+ PK
Sbjct: 44 GYVLDQQALDSVPVGSSREQVLLALGTPSTTATFD---NEVFYYISQ-KRYRAAQFMKPK 99
Query: 101 IMEYIVLKITFGEKGVVSSVS 121
++E +L I F + G V ++
Sbjct: 100 VIERQILAIYFNKDGKVEHIA 120
>gi|190891213|ref|YP_001977755.1| outer membrane protein [Rhizobium etli CIAT 652]
gi|190696492|gb|ACE90577.1| putative outer membrane protein [Rhizobium etli CIAT 652]
Length = 177
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 41 GASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPK 100
G +D +++LV +GSSR V+ SLG+PS + +G + FYY+SQ++ V F K
Sbjct: 42 GYVVDQQSLNLVPEGSSREQVLLSLGTPSTTATFDG---EVFYYISQRRTR-AVAFQKLK 97
Query: 101 IMEYIVLKITFGEKGVVS 118
+++ VL I F + GVV+
Sbjct: 98 VVDQTVLAIYFDKGGVVT 115
>gi|241204017|ref|YP_002975113.1| SmpA/OmlA domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240857907|gb|ACS55574.1| SmpA/OmlA domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 177
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 45 DMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEY 104
D +++LV +GSSR V+ SLG+PS + +G + FYY+SQ++ V F K+++
Sbjct: 46 DQQSLNLVPEGSSREQVLLSLGTPSTTATFDG---EVFYYISQRRTR-AVAFQKLKVVDQ 101
Query: 105 IVLKITFGEKGVVS 118
VL I F + GVVS
Sbjct: 102 SVLAIYFDKDGVVS 115
>gi|304391935|ref|ZP_07373877.1| SmpA/OmlA domain-containing protein [Ahrensia sp. R2A130]
gi|303296164|gb|EFL90522.1| SmpA/OmlA domain-containing protein [Ahrensia sp. R2A130]
Length = 158
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 41 GASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPK 100
G ++ A++LV +GSSR V+ +LG+PS + + +++FYY+SQ+K+ PV FL+ +
Sbjct: 35 GYQVNDQALALVPEGSSREQVLLTLGTPS-TTQTEPDGTETFYYISQRKER-PVAFLAAQ 92
Query: 101 IMEYIVLKITFGEKGVVSSVS 121
+++ VL + + V ++
Sbjct: 93 VVDQRVLAVNMDQNDQVEQIA 113
>gi|13476948|ref|NP_108518.1| hypothetical protein mll8419 [Mesorhizobium loti MAFF303099]
gi|14027711|dbj|BAB54304.1| mll8419 [Mesorhizobium loti MAFF303099]
Length = 226
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 28 LVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQ 87
++ D S G D A+ V GSSR V+ +LG+PS + + +++FYY+SQ
Sbjct: 90 MIGDLSPSETFTQGYVYDQQAVDSVPVGSSREQVLLALGTPSTTATFD---NEAFYYISQ 146
Query: 88 KKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVS 121
+K + V F P++++ VL + FG G V+ ++
Sbjct: 147 TRKRY-VAFDKPRLVDQKVLAVYFGADGRVTQIA 179
>gi|327189789|gb|EGE56930.1| SmpA/OmlA domain protein [Rhizobium etli CNPAF512]
Length = 175
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
Query: 1 MKKILFLNNFFFGKLSFNKALFIIVIGLVVDYHVSYGSI--SGASLDMSAISLVSQGSSR 58
MKK F ++ K N A+ I+ G++ G D +++LV +GSSR
Sbjct: 1 MKKRYFKSDM---KFFSNAAIAFIIASTTALSGCQTGTVLNGGYVADQQSLNLVPEGSSR 57
Query: 59 SHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVS 118
+ SLG+PS + +G + FYY+SQ++ V F K+++ VL I F + GVVS
Sbjct: 58 EQALLSLGTPSTTATFDG---EVFYYISQRRTR-SVAFQKLKVVDQSVLAIYFDKDGVVS 113
>gi|116251401|ref|YP_767239.1| outer membrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115256049|emb|CAK07130.1| putative outer membrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 177
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 45 DMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEY 104
D +++LV +GSSR V+ SLG+PS + +G + FYY+SQ++ V F K+++
Sbjct: 46 DQQSLNLVPEGSSREQVLLSLGTPSTTATFDG---EVFYYISQRRTR-AVAFQKLKVVDQ 101
Query: 105 IVLKITFGEKGVVSSVSMERLPNRRFN 131
VL I F + GVV NRR N
Sbjct: 102 SVLAIYFDKDGVV---------NRRAN 119
>gi|90419416|ref|ZP_01227326.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90336353|gb|EAS50094.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 154
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 41 GASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPK 100
G +D + LV GSSR V+ +LGSPS + + ++ FYY+SQK+ PV F+ P+
Sbjct: 35 GYVIDEKTVELVPVGSSREQVLLALGSPSTTATFD---NEVFYYISQKRVR-PVAFMKPQ 90
Query: 101 IMEYIVLKITFGEKGVVSSVS 121
+++ VL + F +G V ++
Sbjct: 91 LVDQRVLSVYFDGEGRVERIA 111
>gi|86357166|ref|YP_469058.1| hypothetical protein RHE_CH01528 [Rhizobium etli CFN 42]
gi|86281268|gb|ABC90331.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 166
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 41 GASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPK 100
G +D +++LV +GSSR V+ SLG+PS + +G + FYY+SQ++ V F K
Sbjct: 31 GYVVDQQSLNLVPEGSSREQVLLSLGTPSTTATFDG---EVFYYISQRRTR-AVAFQKLK 86
Query: 101 IMEYIVLKITFGEKGVVS 118
+++ VL I F + GVV+
Sbjct: 87 VVDQSVLAIYFDKDGVVT 104
>gi|222148212|ref|YP_002549169.1| hypothetical protein Avi_1624 [Agrobacterium vitis S4]
gi|221735200|gb|ACM36163.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 230
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
+G +D A+ LV G+SR V+ SLG+PS + +G + FYY+SQ +K PV F+
Sbjct: 105 NGYIVDPKALDLVPVGASREQVLLSLGTPSTTATFDG---EVFYYISQTRKR-PVAFMKQ 160
Query: 100 KIMEYIVLKITFGEKGVV 117
++++ VL I F + G V
Sbjct: 161 QLVDQQVLAIYFDKNGTV 178
>gi|218658556|ref|ZP_03514486.1| SmpA/OmlA domain protein [Rhizobium etli IE4771]
Length = 164
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 45 DMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEY 104
D ++ LV +GSSR + SLG+PS + +G + FYY+SQ++ V F K+++
Sbjct: 14 DQQSLDLVPEGSSREQALLSLGTPSTTATFDG---EVFYYISQRRTR-SVAFQKLKVVDQ 69
Query: 105 IVLKITFGEKGVVS 118
VL I F + GVVS
Sbjct: 70 SVLAIYFDKDGVVS 83
>gi|114704827|ref|ZP_01437735.1| hypothetical protein FP2506_07821 [Fulvimarina pelagi HTCC2506]
gi|114539612|gb|EAU42732.1| hypothetical protein FP2506_07821 [Fulvimarina pelagi HTCC2506]
Length = 164
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 5/115 (4%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
+G +D + LV +GSSR V +LGSPS + N Q++YY+SQ+++ V FL+P
Sbjct: 45 AGYVIDEQMLQLVPEGSSREQVELALGSPSTTATF--NEQQTYYYISQRRER-RVAFLTP 101
Query: 100 KIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTADGFLRRLLN 153
+ VL + F + VS ++ L + R F+ T P + A FL ++L
Sbjct: 102 SVTNQRVLAVYFNNEDRVSRIANYGLQDGRVFDFISRTTPTGGRDAS-FLGQILG 155
>gi|325292549|ref|YP_004278413.1| hypothetical protein AGROH133_05409 [Agrobacterium sp. H13-3]
gi|325060402|gb|ADY64093.1| hypothetical protein AGROH133_05409 [Agrobacterium sp. H13-3]
Length = 176
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 75/144 (52%), Gaps = 8/144 (5%)
Query: 13 GKLSFNKALFIIVIGLVVDYHVSYGSI--SGASLDMSAISLVSQGSSRSHVIESLGSPSF 70
GK+ A+ I+V ++ S + +G +D ++ L+ +GSSR V+ ++G+PS
Sbjct: 18 GKILGKTAIAIVVASTLLSACTSTTDVFHNGYVMDEQSLQLIPEGSSREQVLLTMGTPST 77
Query: 71 SILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR- 129
+ GN + FYY+SQ K+ F+ P ++E +L I F + GV+ + L + +
Sbjct: 78 TATF-GN--EVFYYISQ-KRVRRAAFMKPTLVEQNILAIYFNKDGVIERKANYALQDGKV 133
Query: 130 FNPNPHTIPAPIQTADGFLRRLLN 153
F+ T P + FL++LL+
Sbjct: 134 FDTISRTTPTGGKDLT-FLQQLLS 156
>gi|148559645|ref|YP_001258751.1| hypothetical protein BOV_0765 [Brucella ovis ATCC 25840]
gi|148370902|gb|ABQ60881.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
Length = 214
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 41 GASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPK 100
G LD A+ V GSSR V+ +LG+PS + + ++ FYY+SQ K++ + + PK
Sbjct: 91 GYVLDQQALDSVPVGSSREQVLLALGTPSTTATFD---NEVFYYISQ-KRYRAAQLMKPK 146
Query: 101 IMEYIVLKITFGEKGVVSSVS 121
++E +L I F + G V ++
Sbjct: 147 VIERQILAIYFNKDGKVEHIA 167
>gi|261324886|ref|ZP_05964083.1| SmpA/OmlA domain-containing protein [Brucella neotomae 5K33]
gi|261300866|gb|EEY04363.1| SmpA/OmlA domain-containing protein [Brucella neotomae 5K33]
Length = 172
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 41 GASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPK 100
G LD A+ V GSSR V+ +LG+PS + + ++ FYY+SQ K++ + + PK
Sbjct: 49 GYVLDQQALDSVPVGSSREQVLLALGTPSTTATFD---NEVFYYISQ-KRYRAAQLMKPK 104
Query: 101 IMEYIVLKITFGEKGVVSSVS 121
++E +L I F + G V ++
Sbjct: 105 VIERQILAIYFNKDGKVEHIA 125
>gi|218673693|ref|ZP_03523362.1| SmpA/OmlA domain protein [Rhizobium etli GR56]
Length = 166
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 45 DMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEY 104
D +++LV +GSSR + SLG+PS + +G + FYY+SQ++ V F K+++
Sbjct: 35 DQQSLNLVPEGSSREQALLSLGTPSTTATFDG---EVFYYISQRRTR-SVAFQKLKVVDQ 90
Query: 105 IVLKITFGEKGVVS 118
VL I F + GVVS
Sbjct: 91 SVLAIYFDKDGVVS 104
>gi|256060888|ref|ZP_05451048.1| hypothetical protein Bneo5_11067 [Brucella neotomae 5K33]
Length = 167
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 41 GASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPK 100
G LD A+ V GSSR V+ +LG+PS + + ++ FYY+SQ K++ + + PK
Sbjct: 44 GYVLDQQALDSVPVGSSREQVLLALGTPSTTATFD---NEVFYYISQ-KRYRAAQLMKPK 99
Query: 101 IMEYIVLKITFGEKGVVSSVS 121
++E +L I F + G V ++
Sbjct: 100 VIERQILAIYFNKDGKVEHIA 120
>gi|209548796|ref|YP_002280713.1| SmpA/OmlA domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209534552|gb|ACI54487.1| SmpA/OmlA domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 177
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Query: 14 KLSFNKALFIIVIGLVVDYHVSYGSI--SGASLDMSAISLVSQGSSRSHVIESLGSPSFS 71
KL + A+ +I+ V G++ G D +++LV +GSSR V+ SLG+PS +
Sbjct: 13 KLFSSAAIALIIASTSVLSGCQTGTVLNGGYVADQQSLNLVPEGSSREQVLLSLGTPSTT 72
Query: 72 ILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVS 118
+G + FYY+SQ++ V F K+++ VL I F + VVS
Sbjct: 73 ATFDG---EVFYYISQRRTR-AVAFQKLKVVDQSVLAIYFDKDSVVS 115
>gi|319408452|emb|CBI82107.1| small protein A [Bartonella schoenbuchensis R1]
Length = 137
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 41 GASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPK 100
G LD +A+ VS GSS+ V+ +LG+PS ++ ++ FYY+SQ ++ ++F+ K
Sbjct: 22 GYVLDQNALDSVSVGSSQEQVLLALGTPSLKTKYD---NEVFYYISQ-TRYRKMRFMKTK 77
Query: 101 IMEYIVLKITFGEKGVVSSVS 121
I++ VL I F G V+ ++
Sbjct: 78 IIDRKVLAIYFNRNGQVARIA 98
>gi|319407318|emb|CBI80959.1| small protein A [Bartonella sp. 1-1C]
Length = 151
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G LD +A+ +S GSS+ V+ SLGSPS +N ++ FYY+SQ ++ ++F+
Sbjct: 29 EGYILDQNALDSISIGSSQEQVLLSLGSPSLKTQYN---NEVFYYISQ-TRYRKMQFMKT 84
Query: 100 KIMEYIVLKITFGEKGVVSSVS 121
KI + VL I F + V+ ++
Sbjct: 85 KITDRKVLAIYFNKDRQVTKIA 106
>gi|159184649|ref|NP_354193.2| hypothetical protein Atu1175 [Agrobacterium tumefaciens str. C58]
gi|159139947|gb|AAK86978.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 177
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 75/144 (52%), Gaps = 8/144 (5%)
Query: 13 GKLSFNKALFIIVIGLVVDYHVSYGSI--SGASLDMSAISLVSQGSSRSHVIESLGSPSF 70
GK+ A+ I++ ++ S + +G +D ++ L+ +GSSR V+ ++G+PS
Sbjct: 18 GKILSKTAIAIVLASGLLSACTSTTDVFHNGYVMDDQSLQLIPEGSSREQVLLTMGTPST 77
Query: 71 SILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR- 129
+ GN + FYY+SQ K+ FL P ++E +L I F + GV+ + L + +
Sbjct: 78 TATF-GN--EVFYYISQ-KRVRRAAFLKPSLVEQNILAIYFNKDGVIERKANYTLQDGKV 133
Query: 130 FNPNPHTIPAPIQTADGFLRRLLN 153
F+ T P + FL++LL+
Sbjct: 134 FDSISRTTPTGGKDLT-FLQQLLS 156
>gi|319405756|emb|CBI79379.1| Small protein A [Bartonella sp. AR 15-3]
Length = 174
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G LD SA+ +S GSS+ V+ +LGSPS +N ++ FYY+SQ ++ ++F+
Sbjct: 52 EGYILDQSALDSISVGSSQEQVLLALGSPSLKTQYN---NEVFYYISQ-TRYRKMQFMKT 107
Query: 100 KIMEYIVLKITFGEKGVVSSVSMERLPNRR 129
KI + VL I F + V ++ L + R
Sbjct: 108 KITDRKVLAIYFNKDRQVIKIANYGLQDGR 137
>gi|163759214|ref|ZP_02166300.1| hypothetical protein HPDFL43_05600 [Hoeflea phototrophica DFL-43]
gi|162283618|gb|EDQ33903.1| hypothetical protein HPDFL43_05600 [Hoeflea phototrophica DFL-43]
Length = 156
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 41 GASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPK 100
G +D +A+ L GSSR V+ SLG+PS + + ++ FYY+SQ++ + F+ P+
Sbjct: 27 GYVVDQTALDLTPVGSSREQVLLSLGTPSTTATFD---NEVFYYISQRRVRGAM-FMKPR 82
Query: 101 IMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIP 138
+++ VL + F +G V ++ L + + F+ T P
Sbjct: 83 LVDQSVLAVYFDGEGTVERIANYTLQDGKVFDMITRTTP 121
>gi|319404313|emb|CBI77906.1| small protein A [Bartonella rochalimae ATCC BAA-1498]
Length = 151
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G LD +A+ +S GSS+ V+ +LGSPS +N ++ FYY+SQ ++ ++F+
Sbjct: 29 EGYILDQNALDSISIGSSQEQVLLALGSPSLKTQYN---NEVFYYISQ-TRYRKMQFMKT 84
Query: 100 KIMEYIVLKITFGEKGVVSSVS 121
KI + VL I F + V+ ++
Sbjct: 85 KITDRKVLAIYFNKDRQVTKIA 106
>gi|121602304|ref|YP_988939.1| SmpA/OmlA family outer membrane protein [Bartonella bacilliformis
KC583]
gi|120614481|gb|ABM45082.1| outer membrane protein, SmpA/OmlA family [Bartonella bacilliformis
KC583]
Length = 118
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G LD SA+ +S GSS+ V+ SLGSPS ++ ++ FYY+SQ ++ ++F+
Sbjct: 7 EGYILDQSALDSISIGSSQEQVLLSLGSPSLKAKYD---NEVFYYISQ-IRYRRMQFMKT 62
Query: 100 KIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPA 139
KI++ VL I F V ++ L + R F+ T P
Sbjct: 63 KIVDRKVLAIYFDNNNQVERIANYGLQDGRVFDFITQTTPT 103
>gi|158423922|ref|YP_001525214.1| SmpA protein [Azorhizobium caulinodans ORS 571]
gi|158330811|dbj|BAF88296.1| SmpA protein [Azorhizobium caulinodans ORS 571]
Length = 212
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 27 GLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVS 86
G+V Y Y L A+ V GSSR V+ LG+PS NG+ FYY+S
Sbjct: 87 GIVRTYQRGY------VLSDGALEQVPVGSSREQVLLVLGTPSTVSTLNGD---VFYYIS 137
Query: 87 QKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVS 121
Q +K V FL P+I + VL + FG+ V+ ++
Sbjct: 138 QTEKR--VAFLKPEITDQKVLAVYFGKDKRVTRIA 170
>gi|163868462|ref|YP_001609671.1| small protein A [Bartonella tribocorum CIP 105476]
gi|161018118|emb|CAK01676.1| small protein A [Bartonella tribocorum CIP 105476]
Length = 162
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G LD +A+S +S GSS+ V+ +LG+PS ++ ++ FYY+SQ ++ ++F+
Sbjct: 44 EGYILDKNALSSISIGSSQEQVLLTLGTPSLKTKYD---NEVFYYISQ-TRYRGMQFMKT 99
Query: 100 KIMEYIVLKITFGEKGVVSSVS 121
KI++ VL I F VS V+
Sbjct: 100 KIIDRKVLAIYFNGNNQVSKVA 121
>gi|49475531|ref|YP_033572.1| hypothetical protein BH07600 [Bartonella henselae str. Houston-1]
gi|49238337|emb|CAF27561.1| hypothetical protein BH07600 [Bartonella henselae str. Houston-1]
Length = 159
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 17/111 (15%)
Query: 24 IVIGLVVDYHVSYGSIS-------------GASLDMSAISLVSQGSSRSHVIESLGSPSF 70
++IGL++ V+ G S G LD +A+ +S GSS+ VI +LG+PS
Sbjct: 12 LLIGLLIASIVAIGGCSLVDSSGSSQIYKEGYILDKNALDSISIGSSQEQVILALGTPSL 71
Query: 71 SILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVS 121
++ ++ FYY+SQ ++ ++F+ KI++ VL I F + V+ ++
Sbjct: 72 KTKYD---NEVFYYISQ-TRYRGMQFMKTKIIDRKVLAIYFNKNDQVTKIA 118
>gi|240850686|ref|YP_002972086.1| small protein A, outer membrane lipoprotein [Bartonella grahamii
as4aup]
gi|240267809|gb|ACS51397.1| small protein A, outer membrane lipoprotein [Bartonella grahamii
as4aup]
Length = 159
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G LD +A+S ++ GSS+ V+ +LG+PS ++ ++ FYY+SQ ++ ++F+
Sbjct: 41 EGYILDKNALSSIAIGSSQEQVLLTLGTPSLKTKYD---NEVFYYISQ-TRYRGMQFMKT 96
Query: 100 KIMEYIVLKITFGEKGVVSSVS 121
KI++ VL I F + V+ V+
Sbjct: 97 KIIDRKVLAIYFNKNDQVAKVA 118
>gi|110633495|ref|YP_673703.1| SmpA/OmlA [Mesorhizobium sp. BNC1]
gi|110284479|gb|ABG62538.1| SmpA/OmlA [Chelativorans sp. BNC1]
Length = 176
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 41 GASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPK 100
G +D A+ LV GSSR V+ +LG+PS + + ++ FYY+SQK+ F++ K
Sbjct: 48 GYVIDPQALELVPVGSSREQVLLALGTPSTTATFD---NEVFYYISQKRVR-GAAFMNAK 103
Query: 101 IMEYIVLKITFGEKGVVSSVS 121
+++ VL + FG V+ ++
Sbjct: 104 LVDQQVLAVYFGPDQRVTQIA 124
>gi|254469516|ref|ZP_05082921.1| smAll protein a [Pseudovibrio sp. JE062]
gi|211961351|gb|EEA96546.1| smAll protein a [Pseudovibrio sp. JE062]
Length = 145
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 47 SAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIV 106
AI V GSSR V LGSPS + +G +++YY+SQK + V F SP I++ V
Sbjct: 35 DAIQDVQVGSSREQVELLLGSPSTTSNLDG---EAYYYISQKSE--TVAFWSPSIVDQRV 89
Query: 107 LKITFGEKGVVSSVS 121
+ + F + G V SV+
Sbjct: 90 VAVYFDKDGYVKSVA 104
>gi|319898988|ref|YP_004159081.1| Small protein A [Bartonella clarridgeiae 73]
gi|319402952|emb|CBI76503.1| Small protein A [Bartonella clarridgeiae 73]
Length = 175
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G LD +A+ VS GSS+ V+ +LGSPS ++ ++ FYY+SQ ++ ++F+
Sbjct: 53 EGYILDKNALDSVSVGSSQEQVLLALGSPSLKTHYD---NEVFYYISQ-TRYRKMRFMKT 108
Query: 100 KIMEYIVLKITFGEKGVVSSVS 121
KI + VL I F + V ++
Sbjct: 109 KITDRKVLAIYFNKDRQVIKIA 130
>gi|307945257|ref|ZP_07660593.1| SmpA/OmlA [Roseibium sp. TrichSKD4]
gi|307771130|gb|EFO30355.1| SmpA/OmlA [Roseibium sp. TrichSKD4]
Length = 145
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 47 SAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIV 106
S + V GSS+ V LGSPS + NG Q++YY+SQ + FL+P I+E V
Sbjct: 35 SMLEQVQVGSSQEQVQLVLGSPSTTSNLNG---QAYYYISQTTE--TTAFLAPDIVEQRV 89
Query: 107 LKITFGEKGVVSSV 120
+ + F E+G V +
Sbjct: 90 VAVYFDEEGYVRDI 103
>gi|259418915|ref|ZP_05742832.1| lipoprotein, SmpA/OmlA family [Silicibacter sp. TrichCH4B]
gi|259345137|gb|EEW56991.1| lipoprotein, SmpA/OmlA family [Silicibacter sp. TrichCH4B]
Length = 155
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 56 SSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKG 115
+R V E++G P+ L + +YYV+ + K F K P+++ ++ ITF +G
Sbjct: 51 DTRDSVSETIGEPTIDSLAD---DSGYYYVTSRIKRFGAK--QPEVISRDLVAITFDGRG 105
Query: 116 VVSSVSMERLPNRRFNPNPHTIPAPIQTADGFLRRLL 152
VV SV L + R P + FLR+LL
Sbjct: 106 VVDSVQRYTLADGRVIPLERRVTDSSLEDKTFLRQLL 142
>gi|254505208|ref|ZP_05117359.1| SmpA / OmlA family [Labrenzia alexandrii DFL-11]
gi|222441279|gb|EEE47958.1| SmpA / OmlA family [Labrenzia alexandrii DFL-11]
Length = 145
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 49 ISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLK 108
+S V GSSR V LGSPS +G+ ++YY+SQK FL+P I+E V+
Sbjct: 37 MSQVQVGSSREQVELVLGSPSTRSSLDGD---AYYYISQKTA--TTAFLAPDIVEQRVVA 91
Query: 109 ITFGEKGVVSSVSMERLPNRR 129
+ F E G V + L + +
Sbjct: 92 VYFDEDGFVKDMGNYTLEDGK 112
>gi|154248301|ref|YP_001419259.1| SmpA/OmlA domain-containing protein [Xanthobacter autotrophicus
Py2]
gi|154162386|gb|ABS69602.1| SmpA/OmlA domain protein [Xanthobacter autotrophicus Py2]
Length = 153
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 41 GASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPK 100
G L A+ V GSS+ V+ LG+PS NG ++F+Y+SQ + V FL P+
Sbjct: 42 GYVLAEGALDQVPVGSSQEQVLLVLGTPSTVATVNG---EAFFYISQTAQ--KVAFLKPE 96
Query: 101 IMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPA 139
I E VL I F + VS V+ L + + F+ T P
Sbjct: 97 ITEQKVLAIYFDKNKRVSRVAQYGLKDGKVFDFVSQTTPT 136
>gi|56697338|ref|YP_167706.1| SmpA/OmlA family lipoprotein [Ruegeria pomeroyi DSS-3]
gi|56679075|gb|AAV95741.1| lipoprotein, SmpA/OmlA family [Ruegeria pomeroyi DSS-3]
Length = 155
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 56 SSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKG 115
+R V+E++G+PS S L N +YYV+ + + + + +P+++ ++ I+F ++G
Sbjct: 51 DTRDSVVEAVGTPSSSGLLN---ESGYYYVASRMRHYGAR--APQVVSRELVAISFDQRG 105
Query: 116 VVSSVSMERLPNRRFNPNPHTIPAPIQTADGFLRRLL 152
VV ++ L + R P + + F+R+LL
Sbjct: 106 VVRNIERYGLEDGRVIPLERRVTSSSVEDKTFIRQLL 142
>gi|49474165|ref|YP_032207.1| hypothetical protein BQ05450 [Bartonella quintana str. Toulouse]
gi|49239669|emb|CAF26040.1| hypothetical protein BQ05450 [Bartonella quintana str. Toulouse]
Length = 159
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G LD + +S GSS+ VI +LG+PS ++ ++ FYY+SQ ++ ++F+
Sbjct: 41 EGYILDKNVFDSISIGSSQKQVILALGTPSLKTKYD---NEVFYYISQ-TRYRGMQFMKT 96
Query: 100 KIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAP 140
KI++ +L I F + V+ ++ L + + F+ T P
Sbjct: 97 KIIDRKILAIYFNKNDQVAKIANYGLQDGQVFDFIAQTTPTA 138
>gi|163746482|ref|ZP_02153840.1| lipoprotein, putative [Oceanibulbus indolifex HEL-45]
gi|161380367|gb|EDQ04778.1| lipoprotein, putative [Oceanibulbus indolifex HEL-45]
Length = 154
Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 56 SSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKG 115
++ V + +G P+ S + + + S+YYV +K+ FL+PK +E V+ ++F E G
Sbjct: 50 DTKESVAQKIGVPTASGVLSDD---SYYYVKMRKRAL--GFLAPKEVEREVVTVSFNEAG 104
Query: 116 VVSSVSMERLPNRRFNPNPHTIPAPIQTADGFLRRLLNPNGR 157
VVS+V L + P + + FLR+LL GR
Sbjct: 105 VVSNVERFGLERGQVVPLSRRVTTSPVADNTFLRQLLGNLGR 146
>gi|118587993|ref|ZP_01545403.1| SmpA/OmlA [Stappia aggregata IAM 12614]
gi|118439615|gb|EAV46246.1| SmpA/OmlA [Stappia aggregata IAM 12614]
Length = 145
Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 52 VSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITF 111
V GSSR V LG+PS + NG+ ++YY+SQK F++P I+E V+ + F
Sbjct: 40 VQVGSSREQVELVLGTPSTTSSLNGD---AYYYISQKTA--TTAFMAPDIVEQRVVAVYF 94
Query: 112 GEKGVVSSVSMERLPNRRF 130
+ G V + L + +
Sbjct: 95 DKDGYVQDLGNYSLEDGKI 113
>gi|148554847|ref|YP_001262429.1| SmpA/OmlA domain-containing protein [Sphingomonas wittichii RW1]
gi|148500037|gb|ABQ68291.1| SmpA/OmlA domain protein [Sphingomonas wittichii RW1]
Length = 160
Score = 41.6 bits (96), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 41 GASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G +D + I+ VS G +R V ++LG PSF+ + + +++YYV++ + V + +P
Sbjct: 32 GYVVDSTLINTVSPGVDNRESVEKTLGRPSFAGQFD--KERTWYYVARDTR--QVGYRTP 87
Query: 100 KIMEYIVLKITFGEKGVVSSVSMERL 125
K + VL + F +KG V+SV L
Sbjct: 88 KAVSQTVLAVHFDDKGNVASVERTGL 113
>gi|255263566|ref|ZP_05342908.1| lipoprotein, SmpA/OmlA family [Thalassiobium sp. R2A62]
gi|255105901|gb|EET48575.1| lipoprotein, SmpA/OmlA family [Thalassiobium sp. R2A62]
Length = 157
Score = 41.2 bits (95), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 56 SSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKG 115
+R+ V E++G P+ + NG FYYVS +W V +P+I++ ++ ITF + G
Sbjct: 51 DTRASVEETVGIPTTGGVLNG---AGFYYVS--SRWKRVGGFAPQIIDRQLVAITFDDAG 105
Query: 116 VVSSVS 121
VV ++
Sbjct: 106 VVQNIE 111
>gi|99080759|ref|YP_612913.1| SmpA/OmlA family lipoprotein [Ruegeria sp. TM1040]
gi|99037039|gb|ABF63651.1| lipoprotein SmpA/OmlA family [Ruegeria sp. TM1040]
Length = 155
Score = 41.2 bits (95), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 56 SSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKG 115
+R V E++G P+ L + +YYVS + K F K P+++ ++ ITF +G
Sbjct: 51 DTRDSVSETIGEPTIDSLVD---DSGYYYVSSRIKRFGPK--EPEVVSRDLVAITFDGRG 105
Query: 116 VVSSVSMERLPNRRFNPNPHTIPAPIQTADGFLRRLL 152
VV SV L + R P + FLR+L+
Sbjct: 106 VVDSVQRYTLADGRAVPLERRVTDSNLEDKTFLRQLI 142
>gi|298291646|ref|YP_003693585.1| SmpA/OmlA domain protein [Starkeya novella DSM 506]
gi|296928157|gb|ADH88966.1| SmpA/OmlA domain protein [Starkeya novella DSM 506]
Length = 178
Score = 40.8 bits (94), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 10/76 (13%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLS 98
IS SLD I GSS+ V+ LG+PS +G + FYY+SQK K V FL
Sbjct: 65 ISPGSLDQIPI-----GSSQEQVLLVLGTPSTIATVDG---EVFYYISQKTKK--VMFLR 114
Query: 99 PKIMEYIVLKITFGEK 114
P+I++ V+ + F K
Sbjct: 115 PEIIDQRVIAVYFDPK 130
>gi|149202715|ref|ZP_01879687.1| lipoprotein, SmpA/OmlA family [Roseovarius sp. TM1035]
gi|149143997|gb|EDM32031.1| lipoprotein, SmpA/OmlA family [Roseovarius sp. TM1035]
Length = 135
Score = 40.8 bits (94), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 50 SLVSQGSSRSHVIESLGSPSFS-ILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLK 108
+LV SR+ V + +G PS S +L +G+ +YYV + + + P+++E VL
Sbjct: 24 NLVVGVDSRATVDDVIGPPSLSGVLADGD----YYYVRSRVREY--GMFRPQVVERRVLA 77
Query: 109 ITFGEKGVVSSVSMERLPNRRFNPNPHTIPAPIQTADGFLRRLL 152
I+F + ++++ L + + P + ++GFLR+LL
Sbjct: 78 ISFNDNDTIANIEEFGLEDGQVVPLARRVTDSSVVSNGFLRQLL 121
>gi|260426346|ref|ZP_05780325.1| lipoprotein, SmpA/OmlA family [Citreicella sp. SE45]
gi|260420838|gb|EEX14089.1| lipoprotein, SmpA/OmlA family [Citreicella sp. SE45]
Length = 150
Score = 40.4 bits (93), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 56 SSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKG 115
+RS V + +G PS S + N FYY+ + + F + +P++++ +L ITF G
Sbjct: 45 DTRSTVEDVIGVPSASGVLN---ESGFYYIETQMRSF--AWRAPEVVDREILAITFDNAG 99
Query: 116 VVSSVSMERLPNRRFNPNPHTIPAPIQTADG---FLRRL 151
VV +++ L + P I +T+DG F+RRL
Sbjct: 100 VVDNITRYGLEDGNVVPLTRRI---TRTSDGELSFIRRL 135
>gi|328543544|ref|YP_004303653.1| SmpA/OmlA [polymorphum gilvum SL003B-26A1]
gi|326413288|gb|ADZ70351.1| SmpA/OmlA [Polymorphum gilvum SL003B-26A1]
Length = 145
Score = 40.4 bits (93), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 5/116 (4%)
Query: 14 KLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSIL 73
K+ + + +V+GL + + G ++ + + GSSR +V LGSPS +
Sbjct: 2 KMKAHAVMVPVVLGLTLGGCFTQSYNHGHAISQDMLDQIQVGSSRENVELVLGSPSTTSN 61
Query: 74 HNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR 129
+G+ ++YY+SQ + F+ KI+E V+ + F E+G V + L + +
Sbjct: 62 ISGD---AYYYISQVAQ--TTAFMGSKIVEQRVVAVYFDEEGYVRDIGHYGLQDGK 112
>gi|126729750|ref|ZP_01745563.1| lipoprotein, SmpA/OmlA family [Sagittula stellata E-37]
gi|126709869|gb|EBA08922.1| lipoprotein, SmpA/OmlA family [Sagittula stellata E-37]
Length = 152
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 56 SSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKG 115
+R+ V + +G P+ S + N FYY+ + K F + P + E ++ ITF + G
Sbjct: 47 DTRATVEDVVGVPNASGVLN---DSGFYYIQSEVKHFA--WQRPTVTEREIVAITFDQAG 101
Query: 116 VVSSVSMERLPNRRFNPNPHTIPAPIQTADG---FLRRL 151
VV ++ L + R P + QT+DG F+R+L
Sbjct: 102 VVDNIVTYGLEDGRVVPLTKRVT---QTSDGDISFIRKL 137
>gi|170744272|ref|YP_001772927.1| SmpA/OmlA domain-containing protein [Methylobacterium sp. 4-46]
gi|168198546|gb|ACA20493.1| SmpA/OmlA domain protein [Methylobacterium sp. 4-46]
Length = 154
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 8/109 (7%)
Query: 14 KLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSIL 73
+L+ L + V G V+ +G + +D +A++ V G+S V++ LG+P+ ++
Sbjct: 11 RLAAAGLLGLSVAGCVIGEEFRHGYL----IDEAAVAQVKPGTSAEQVLQLLGTPT-TVS 65
Query: 74 HNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSM 122
GN+ S+YY+SQ K V FL + VL + F + V V++
Sbjct: 66 TVGNK--SWYYISQNTKR-TVMFLGERAESQRVLAVYFNQGFKVERVAL 111
>gi|83952154|ref|ZP_00960886.1| lipoprotein, SmpA/OmlA family protein [Roseovarius nubinhibens ISM]
gi|83837160|gb|EAP76457.1| lipoprotein, SmpA/OmlA family protein [Roseovarius nubinhibens ISM]
Length = 151
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 56 SSRSHVIESLGSPSFS-ILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEK 114
+R+ V + +G PS + +L +GN +YYV + + + L P+++E VL I+F +
Sbjct: 46 DTRATVDDVVGPPSTAGVLSDGN----YYYVRSRVRHYGA--LRPEVIERQVLAISFDQA 99
Query: 115 GVVSSVSMERLPNRRFNPNPHTIPAPIQTADGFLRRLLNPNGR 157
VV++V L + + + +GFLR++L GR
Sbjct: 100 DVVANVERFGLQDGQVVVLSRRVTDSSVEGNGFLRQMLGNIGR 142
>gi|220926820|ref|YP_002502122.1| SmpA/OmlA domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219951427|gb|ACL61819.1| SmpA/OmlA domain protein [Methylobacterium nodulans ORS 2060]
Length = 154
Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 14 KLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSIL 73
+L+ L + V G V+ G + +D +A++ V GSS V++ LG+P+ ++
Sbjct: 11 RLAAAGFLGLSVAGCVIGEEFRRGYL----IDEAAVAQVKPGSSAEQVLQLLGTPT-TVS 65
Query: 74 HNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSM 122
GN+ S+YY+SQ K V FL + VL + F + V V++
Sbjct: 66 TVGNK--SWYYISQNTKR-TVMFLGESTEDQRVLAVYFNQGFKVERVAL 111
>gi|146277945|ref|YP_001168104.1| SmpA/OmlA domain-containing protein [Rhodobacter sphaeroides ATCC
17025]
gi|145556186|gb|ABP70799.1| SmpA/OmlA domain protein [Rhodobacter sphaeroides ATCC 17025]
Length = 160
Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 56 SSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKG 115
+R V E +G PS S L N +YYV + + + + P+ ++ V+ ITF E G
Sbjct: 56 DTRDTVAEIVGRPSASTLLN---DSGWYYVQSRYRHYGAR--EPQEVDREVVAITFSEAG 110
Query: 116 VVSSVSMERLPNRRFNPNPHTIPAPIQTADGFLRRL 151
V ++ L + P + GFLR+L
Sbjct: 111 TVRNIERFGLEKGQIVPLSRRVTESTIQGTGFLRQL 146
>gi|110834019|ref|YP_692878.1| DNA polymerase III subunit alpha [Alcanivorax borkumensis SK2]
gi|110647130|emb|CAL16606.1| DNA polymerase III, alpha subunit [Alcanivorax borkumensis SK2]
Length = 1166
Score = 38.5 bits (88), Expect = 0.28, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 67 SPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLP 126
SPSF +L G+ + F SQ K +K L P + E I+ + G + S ++
Sbjct: 600 SPSFDLLKRGDTTAVFQLESQGMKEL-IKKLKPDVFEDIIALVALYRPGPLESGMVDNFV 658
Query: 127 NRRFNPNPHTIPAPIQTADGFLRRLLNPN 155
NR+ P P P Q +L +L P+
Sbjct: 659 NRKHGREPLAYPDP-QYQHEWLEPILKPS 686
>gi|86749763|ref|YP_486259.1| SmpA/OmlA [Rhodopseudomonas palustris HaA2]
gi|86572791|gb|ABD07348.1| SmpA/OmlA [Rhodopseudomonas palustris HaA2]
Length = 158
Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 48 AISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVL 107
A+ + G+S+ V+ +G+PS NG + FYY+SQ+ + PV F+ K+++ V+
Sbjct: 52 ALEQIPIGASQDQVLIVMGTPSTVATLNG---EVFYYISQRSER-PVAFMPQKVVDQRVI 107
Query: 108 KITFGEKGVVSSVS 121
I F + V ++
Sbjct: 108 AIYFDQNRQVRRIA 121
>gi|83858233|ref|ZP_00951755.1| hypothetical protein OA2633_02001 [Oceanicaulis alexandrii
HTCC2633]
gi|83853056|gb|EAP90908.1| hypothetical protein OA2633_02001 [Oceanicaulis alexandrii
HTCC2633]
Length = 165
Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 56 SSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKG 115
S+S V+ +LG+PS ++YY+S +++ +L P E ++ + F E G
Sbjct: 46 DSQSTVLATLGNPS---TRGAFEQDTWYYISATREYL--AYLRPDTRERRIIAVRFDENG 100
Query: 116 VVSSVS 121
VVS+V
Sbjct: 101 VVSAVD 106
>gi|85703257|ref|ZP_01034361.1| hypothetical protein ROS217_20987 [Roseovarius sp. 217]
gi|85672185|gb|EAQ27042.1| hypothetical protein ROS217_20987 [Roseovarius sp. 217]
Length = 151
Score = 37.7 bits (86), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 50 SLVSQGSSRSHVIESLGSPSFS-ILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLK 108
+LV +R+ V + +G PS S +L +G+ +YYV + + + PK++E VL
Sbjct: 41 NLVVGVDTRATVDDVVGPPSLSGVLADGD----YYYVRSRVREY--GMFRPKVVERRVLA 94
Query: 109 ITFGEKGVVSSVSMERLPNRRFNPNPHTIPAPIQTADGFLRRLL 152
I+F + ++++ L + P + +GFLR++L
Sbjct: 95 ISFNDDDTIANIEEFGLEAGQVVPLARRVTDSSVIKNGFLRQIL 138
>gi|312114070|ref|YP_004011666.1| SmpA/OmlA domain-containing protein [Rhodomicrobium vannielii ATCC
17100]
gi|311219199|gb|ADP70567.1| SmpA/OmlA domain-containing protein [Rhodomicrobium vannielii ATCC
17100]
Length = 168
Score = 37.7 bits (86), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 49 ISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLK 108
++ V G S+ V+ +LG+P G ++YYVSQ + P+ F+ P++++ V+
Sbjct: 55 LNQVRVGMSKDEVVLALGTPDTQSAIAGG---TYYYVSQTAQQ-PMAFMKPEVIDRRVVA 110
Query: 109 ITFGEKGVVSSVS 121
+ F +K V ++
Sbjct: 111 VYFDKKDKVEQIA 123
>gi|303256773|ref|ZP_07342787.1| outer membrane lipoprotein OmlA [Burkholderiales bacterium 1_1_47]
gi|330999576|ref|ZP_08323288.1| SmpA / OmlA family protein [Parasutterella excrementihominis YIT
11859]
gi|302860264|gb|EFL83341.1| outer membrane lipoprotein OmlA [Burkholderiales bacterium 1_1_47]
gi|329574463|gb|EGG56030.1| SmpA / OmlA family protein [Parasutterella excrementihominis YIT
11859]
Length = 172
Score = 37.4 bits (85), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 14/82 (17%)
Query: 49 ISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIV-- 106
+ + +G +++ VI LG+P+ L + K++W V FL P+ E +
Sbjct: 47 VDALHEGMTKNQVIFLLGTPALRNLFH------------KEQWNYVYFLKPRFGETSIRK 94
Query: 107 LKITFGEKGVVSSVSMERLPNR 128
L+ITF E G V S +R+P+
Sbjct: 95 LEITFDEDGRVESFKSDRMPDE 116
>gi|254428613|ref|ZP_05042320.1| DNA polymerase III, alpha subunit subfamily, putative [Alcanivorax
sp. DG881]
gi|196194782|gb|EDX89741.1| DNA polymerase III, alpha subunit subfamily, putative [Alcanivorax
sp. DG881]
Length = 1166
Score = 37.0 bits (84), Expect = 0.84, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 68 PSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPN 127
PSF +L G+ + F SQ K +K L P + E I+ + G + S ++ N
Sbjct: 601 PSFDLLKRGDTTAVFQLESQGMKEL-IKKLQPDVFEDIIALVALYRPGPLESGMVDNFVN 659
Query: 128 RRFNPNPHTIPAPIQTADGFLRRLLNPN 155
R+ P P P Q +L +L P+
Sbjct: 660 RKHGREPLAYPDP-QYQHEWLEPILKPS 686
>gi|91204941|ref|YP_537296.1| tmRNA-binding protein [Rickettsia bellii RML369-C]
gi|157827731|ref|YP_001496795.1| tmRNA-binding protein [Rickettsia bellii OSU 85-389]
gi|91068485|gb|ABE04207.1| tmRNA-binding protein [Rickettsia bellii RML369-C]
gi|157803035|gb|ABV79758.1| tmRNA-binding protein [Rickettsia bellii OSU 85-389]
Length = 157
Score = 37.0 bits (84), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 51/84 (60%), Gaps = 12/84 (14%)
Query: 41 GASLDMSAIS-LVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQ---KKKWFPVKF 96
G S+D SA++ L ++ S++ V+E +G+P+ ++ + ++YYV + ++ W
Sbjct: 27 GQSIDDSALTKLEAKKLSKTEVVELIGTPTMIPEYSQD---TWYYVERVMSQRAW----- 78
Query: 97 LSPKIMEYIVLKITFGEKGVVSSV 120
L+PKI++ ++KITF + ++ +
Sbjct: 79 LNPKIVKQRIVKITFDSRNLMQEI 102
>gi|67459629|ref|YP_247253.1| hypothetical protein RF_1237 [Rickettsia felis URRWXCal2]
gi|67005162|gb|AAY62088.1| unknown [Rickettsia felis URRWXCal2]
Length = 157
Score = 37.0 bits (84), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 41 GASLDMSA-ISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQ---KKKWFPVKF 96
G S+D SA + L S+ +++ V+E +G+P+ ++ N ++YYV + ++ W
Sbjct: 27 GQSIDESALVKLESKKLNKTEVVELIGTPTMVPEYSQN---TWYYVERVMSQRAW----- 78
Query: 97 LSPKIMEYIVLKITFGEKGVVSSV 120
L+PKI + ++KITF + V
Sbjct: 79 LNPKIEKQKIVKITFDANNFMQEV 102
>gi|238650587|ref|YP_002916439.1| SmpA/OmlA family lipoprotein [Rickettsia peacockii str. Rustic]
gi|238624685|gb|ACR47391.1| SmpA/OmlA family lipoprotein [Rickettsia peacockii str. Rustic]
Length = 157
Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 41 GASLDMSA-ISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQ---KKKWFPVKF 96
G S+D SA + L S+ +++ V+E +G+P+ ++ N ++YYV + ++ W
Sbjct: 27 GQSIDDSALVKLESKKLNKTEVVELIGTPTIVPEYSQN---TWYYVERVMSQRAW----- 78
Query: 97 LSPKIMEYIVLKITFGEKGVVSSV 120
L+PKI + ++KITF + V
Sbjct: 79 LNPKIEKQKIVKITFDANNFMQEV 102
>gi|254488834|ref|ZP_05102039.1| lipoprotein, SmpA/OmlA family [Roseobacter sp. GAI101]
gi|214045703|gb|EEB86341.1| lipoprotein, SmpA/OmlA family [Roseobacter sp. GAI101]
Length = 154
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 45 DMSAISLVSQGSSRSHVIESLGSP-SFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIME 103
D+ I+ V Q +R V +++G P S +L N +YYV ++K + FL+P+ +E
Sbjct: 41 DLDQIT-VGQ-DTRDTVAQTVGVPASAGLLTN----SGYYYVRSRRK--AIGFLAPQEVE 92
Query: 104 YIVLKITFGEKGVVSSVSMERLPNRRFN 131
V+ ++F +GVV +V ER R N
Sbjct: 93 REVVAVSFNAQGVVENV--ERFGLERGN 118
>gi|296116571|ref|ZP_06835181.1| SmpA/OmlA domain protein [Gluconacetobacter hansenii ATCC 23769]
gi|295976783|gb|EFG83551.1| SmpA/OmlA domain protein [Gluconacetobacter hansenii ATCC 23769]
Length = 189
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 56 SSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKG 115
SSRS V++ LGSP+ + N ++ Y+S ++ P+ F P I + V+ +TF E G
Sbjct: 58 SSRSDVMDLLGSPTSRATFDDN---TWIYISMRQTLAPISF--PHIDKQQVVVLTFDEGG 112
Query: 116 VVSSVSMERLPNRRF 130
++ ++ + R+
Sbjct: 113 ILRNLRTLHKDDARY 127
>gi|157964924|ref|YP_001499748.1| tmRNA-binding protein [Rickettsia massiliae MTU5]
gi|157844700|gb|ABV85201.1| tmRNA-binding protein [Rickettsia massiliae MTU5]
Length = 160
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 41 GASLDMSA-ISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQ---KKKWFPVKF 96
G S+D SA + L S+ +++ V+E +G+P+ ++ N ++YYV + ++ W
Sbjct: 30 GQSIDDSALVKLESKKLNKTEVVELIGTPTMVPEYSQN---TWYYVERVMSQRAW----- 81
Query: 97 LSPKIMEYIVLKITFGEKGVVSSV 120
L+PKI + ++KITF + V
Sbjct: 82 LNPKIEKQKIVKITFDANNFMQEV 105
>gi|34581202|ref|ZP_00142682.1| hypothetical protein [Rickettsia sibirica 246]
gi|28262587|gb|EAA26091.1| unknown [Rickettsia sibirica 246]
Length = 157
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 41 GASLDMSA-ISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQ---KKKWFPVKF 96
G S+D SA + L S+ +++ V+E +G+P+ ++ N ++YYV + ++ W
Sbjct: 27 GQSIDDSALVKLESKKLNKTEVVELIGTPTIVPEYSQN---TWYYVERVMSQRAW----- 78
Query: 97 LSPKIMEYIVLKITFGEKGVVSSV 120
L+PKI + ++KITF + V
Sbjct: 79 LNPKIEKQKIVKITFDANNFMQEV 102
>gi|15893127|ref|NP_360841.1| hypothetical protein RC1204 [Rickettsia conorii str. Malish 7]
gi|229587137|ref|YP_002845638.1| tmRNA-binding protein [Rickettsia africae ESF-5]
gi|15620334|gb|AAL03742.1| unknown [Rickettsia conorii str. Malish 7]
gi|228022187|gb|ACP53895.1| tmRNA-binding protein [Rickettsia africae ESF-5]
Length = 157
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 41 GASLDMSA-ISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQ---KKKWFPVKF 96
G S+D SA + L S+ +++ V+E +G+P+ ++ N ++YYV + ++ W
Sbjct: 27 GQSIDDSALVKLESKKLNKTEVVELIGTPTIVPEYSQN---TWYYVERVMSQRAW----- 78
Query: 97 LSPKIMEYIVLKITFGEKGVVSSV 120
L+PKI + ++KITF + V
Sbjct: 79 LNPKIEKQKIVKITFDANNFMQEV 102
>gi|157829035|ref|YP_001495277.1| hypothetical protein A1G_06580 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933759|ref|YP_001650548.1| SmpA/OmlA family lipoprotein [Rickettsia rickettsii str. Iowa]
gi|157801516|gb|ABV76769.1| hypothetical protein A1G_06580 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908846|gb|ABY73142.1| lipoprotein (SmpA/OmlA family) [Rickettsia rickettsii str. Iowa]
Length = 157
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 41 GASLDMSA-ISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQ---KKKWFPVKF 96
G S+D SA + L S+ +++ V+E +G+P+ ++ N ++YYV + ++ W
Sbjct: 27 GQSIDDSALVKLESKKLNKTEVVELIGTPTIVPEYSQN---TWYYVERVMSQRAW----- 78
Query: 97 LSPKIMEYIVLKITFGEKGVVSSV 120
L+PKI + ++KITF + V
Sbjct: 79 LNPKIEKQKIVKITFDANNFMQEV 102
>gi|332558044|ref|ZP_08412366.1| SmpA/OmlA domain-containing protein [Rhodobacter sphaeroides WS8N]
gi|332275756|gb|EGJ21071.1| SmpA/OmlA domain-containing protein [Rhodobacter sphaeroides WS8N]
Length = 147
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 56 SSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKG 115
+R V E +G PS S L N +YYV + + + + P+ ++ V+ ITF G
Sbjct: 38 DTRDSVAEIVGRPSASTLLN---DSGWYYVQSRYRHYGAR--EPQEVDRQVVAITFNPSG 92
Query: 116 VVSSVSMERLPNRRFNPNPHTIPAPIQTADGFLRRL 151
V ++ L + P + GFLR+L
Sbjct: 93 TVRNIERFGLEKGQIVPLSRRVTDTTIEGTGFLRQL 128
>gi|126462042|ref|YP_001043156.1| SmpA/OmlA domain-containing protein [Rhodobacter sphaeroides ATCC
17029]
gi|126103706|gb|ABN76384.1| SmpA/OmlA domain protein [Rhodobacter sphaeroides ATCC 17029]
Length = 165
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 56 SSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKG 115
+R V E +G PS S L N +YYV + + + + P+ ++ V+ ITF G
Sbjct: 56 DTRDSVAEIVGRPSASTLLN---DSGWYYVQSRYRHYGAR--EPQEVDRQVVAITFNPSG 110
Query: 116 VVSSVSMERLPNRRFNPNPHTIPAPIQTADGFLRRL 151
V ++ L + P + GFLR+L
Sbjct: 111 TVRNIERFGLEKGQIVPLSRRVTDTTIEGTGFLRQL 146
>gi|115524828|ref|YP_781739.1| SmpA/OmlA domain-containing protein [Rhodopseudomonas palustris
BisA53]
gi|115518775|gb|ABJ06759.1| SmpA/OmlA domain protein [Rhodopseudomonas palustris BisA53]
Length = 169
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 47 SAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIV 106
+A+ + G+S+ V+ +G+PS +G + FYY+SQ+ + PV F+ K+++ V
Sbjct: 62 NALEQIPMGASQDQVLLVMGTPSTVATLSG---EVFYYISQRSER-PVGFMPQKVIDQRV 117
Query: 107 LKITFGEKGVVSSVS 121
+ I F + V ++
Sbjct: 118 IAIYFDKNRQVQRIA 132
>gi|77463170|ref|YP_352674.1| hypothetical protein RSP_2616 [Rhodobacter sphaeroides 2.4.1]
gi|77387588|gb|ABA78773.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
Length = 165
Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 56 SSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKG 115
+R V E +G PS S L N +YYV + + + + P+ ++ V+ ITF G
Sbjct: 56 DTRDSVAEIVGRPSASTLLN---DSGWYYVQSRYRHYGAR--EPQEVDRQVVAITFNPTG 110
Query: 116 VVSSVSMERLPNRRFNPNPHTIPAPIQTADGFLRRL 151
V ++ L + P + GFLR+L
Sbjct: 111 TVRNIERFGLEKGQIVPLSRRVTDTTIEGTGFLRQL 146
>gi|114800062|ref|YP_759878.1| SmpA/OmlA family protein [Hyphomonas neptunium ATCC 15444]
gi|114740236|gb|ABI78361.1| SmpA/OmlA family protein [Hyphomonas neptunium ATCC 15444]
Length = 159
Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 45 DMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEY 104
++ I + +RS V+ LGSPS L + N FYY ++++ F PK++E
Sbjct: 34 EVQPIDIKPGDDTRSTVLAQLGSPSTEGLFDTN--IWFYYSDIQERF---AFYRPKVVER 88
Query: 105 IVLKITFGEKGVVSSV 120
++ I+F E V V
Sbjct: 89 SIIAISFSEDDAVDEV 104
>gi|91977153|ref|YP_569812.1| SmpA/OmlA [Rhodopseudomonas palustris BisB5]
gi|91683609|gb|ABE39911.1| SmpA/OmlA [Rhodopseudomonas palustris BisB5]
Length = 158
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 48 AISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVL 107
A+ + G+S+ V+ +G+PS NG + FYY+SQ+ + V F+ K+++ V+
Sbjct: 52 ALEQIPIGASQDQVLIVMGTPSTVATLNG---EVFYYISQRAERM-VAFMPQKVVDQRVI 107
Query: 108 KITFGEKGVVSSVS 121
I F + V ++
Sbjct: 108 AIYFDQNRQVRRIA 121
>gi|221639027|ref|YP_002525289.1| SmpA/OmlA domain-containing protein [Rhodobacter sphaeroides KD131]
gi|221159808|gb|ACM00788.1| SmpA/OmlA domain protein [Rhodobacter sphaeroides KD131]
Length = 138
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 56 SSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKG 115
+R V E +G PS S L N +YYV + + + + P+ ++ V+ ITF G
Sbjct: 29 DTRDSVAEIVGRPSASTLLN---DSGWYYVQSRYRHYGAR--EPQEVDRQVVAITFNPSG 83
Query: 116 VVSSVSMERLPNRRFNPNPHTIPAPIQTADGFLRRL 151
V ++ L + P + GFLR+L
Sbjct: 84 TVRNIERFGLEKGQIVPLSRRVTDTTIEGTGFLRQL 119
>gi|87200649|ref|YP_497906.1| SmpA/OmlA [Novosphingobium aromaticivorans DSM 12444]
gi|87136330|gb|ABD27072.1| SmpA/OmlA [Novosphingobium aromaticivorans DSM 12444]
Length = 164
Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 7/119 (5%)
Query: 23 IIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIE-SLGSPSFSILHNGNRSQS 81
++ +G++ S G +D + ++ V G +E +LG P+F+ Q+
Sbjct: 13 VLALGVLAAGCSSIKDHRGYIIDEALVASVQPGVDNKLSVERTLGRPTFTSQFG---KQT 69
Query: 82 FYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPN-RRFNPNPHTIPA 139
+YYV+ K P F PK +L + F +G VSS++ E + R +P P
Sbjct: 70 WYYVAMNTKQKP--FNRPKTDNQSILVVDFDARGNVSSLTREGMTKVVRLSPESDKTPT 126
>gi|323137739|ref|ZP_08072815.1| SmpA/OmlA domain-containing protein [Methylocystis sp. ATCC 49242]
gi|322397036|gb|EFX99561.1| SmpA/OmlA domain-containing protein [Methylocystis sp. ATCC 49242]
Length = 156
Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 41 GASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPK 100
GA +D + V G + V+ +LG+PS + G +++YYVSQ+ + + F+ K
Sbjct: 44 GAVIDQRKVMQVKPGMTAPQVLTALGTPSTTSTVGG---EAWYYVSQRIE-RSLAFMPQK 99
Query: 101 IMEYIVLKITFGEKGVVSSVS 121
I + VL + F + V+ V+
Sbjct: 100 ITDQHVLAVYFDKNKKVTRVA 120
>gi|209885005|ref|YP_002288862.1| SmpA/OmlA [Oligotropha carboxidovorans OM5]
gi|209873201|gb|ACI92997.1| SmpA/OmlA [Oligotropha carboxidovorans OM5]
Length = 158
Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
AL + G+V+ G L A+ + G+S+ V+ LG+PS +G+
Sbjct: 23 ALTALAFGIVLAGCTGEQFQRGYILPPGALEQIQIGASQDQVLVVLGTPSTVATLDGD-- 80
Query: 80 QSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVS 121
FYY+SQ+ + V F+ ++++ V+ + F + +V V+
Sbjct: 81 -VFYYISQRTER-KVAFMHQQVIDQRVIAVYFDKNRMVRRVA 120
>gi|330994012|ref|ZP_08317942.1| SmpA/OmlA domain-containing protein [Gluconacetobacter sp. SXCC-1]
gi|329758958|gb|EGG75472.1| SmpA/OmlA domain-containing protein [Gluconacetobacter sp. SXCC-1]
Length = 152
Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 56 SSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKG 115
+SRS V+++LGSP+ + N ++ YVS P+ F P++ + V+ +TF + G
Sbjct: 21 TSRSDVMDALGSPTGRATFDDN---TWIYVSMTHVLVPISF--PQVRKQDVVVLTFDQNG 75
Query: 116 VV 117
++
Sbjct: 76 IL 77
>gi|182680283|ref|YP_001834429.1| SmpA/OmlA domain-containing protein [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182636166|gb|ACB96940.1| SmpA/OmlA domain protein [Beijerinckia indica subsp. indica ATCC
9039]
Length = 157
Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLS 98
+ G LD V G+S ++ LG+PS + G+ ++YY++Q +FL+
Sbjct: 40 VHGYQLDARTQQQVRIGASAEQILTLLGTPSTTSTVGGD---AWYYITQVTD-HSFQFLA 95
Query: 99 PKIMEYIVLKITFGEKGVVSSVS 121
PK+++ V + F + V+ V+
Sbjct: 96 PKLVDQRVFAVYFDKSKKVTRVA 118
>gi|89054279|ref|YP_509730.1| SmpA/OmlA [Jannaschia sp. CCS1]
gi|88863828|gb|ABD54705.1| SmpA/OmlA [Jannaschia sp. CCS1]
Length = 154
Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 49 ISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLK 108
+S +S G+SR V E GSP + R ++++Y + + F + +P ++E ++
Sbjct: 42 LSEISIGTSREQVAEIAGSPGTGGVM---RDEAWFYTQYRVRNF--TYNAPDVIERDIVA 96
Query: 109 ITFGEKGVVSSVSMERLPNRRFNPNPHTIPAPIQTADGFLRRLLNPNGR 157
I+F + G V+++ L + + + GF R +L+ GR
Sbjct: 97 ISFSDAGRVTNIERFGLEDGQIVQLSRRVTESSVRDLGFFRSILSNFGR 145
>gi|192291392|ref|YP_001991997.1| SmpA/OmlA domain protein [Rhodopseudomonas palustris TIE-1]
gi|192285141|gb|ACF01522.1| SmpA/OmlA domain protein [Rhodopseudomonas palustris TIE-1]
Length = 161
Score = 35.4 bits (80), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 16 SFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHN 75
SF A+ + ++G + S G L A+ + G+S+ V+ +G+PS +
Sbjct: 23 SFGLAVALTLVGAGMGGCTSEQFQKGYILPNGALEQIPIGASQDQVLLVMGTPSTVATLD 82
Query: 76 GNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVS 121
G + FYY+SQ+ + V F+ K+++ V+ I F + V ++
Sbjct: 83 G---EVFYYISQRTER-AVAFMPQKVIDQRVIAIYFDKNRQVRRIA 124
>gi|329905404|ref|ZP_08274126.1| Glutathione-regulated potassium-efflux system protein KefC
[Oxalobacteraceae bacterium IMCC9480]
gi|327547612|gb|EGF32408.1| Glutathione-regulated potassium-efflux system protein KefC
[Oxalobacteraceae bacterium IMCC9480]
Length = 600
Score = 35.0 bits (79), Expect = 3.1, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSIL 73
ALF+ I L VD+H + + G SL +AI+L + G R+ + GS SF+IL
Sbjct: 100 ALFLFGIALNVDWHTALIAALGLSLSSTAIALATIG-ERNLMATPAGSASFAIL 152
>gi|229917205|ref|YP_002885851.1| diguanylate cyclase [Exiguobacterium sp. AT1b]
gi|229468634|gb|ACQ70406.1| diguanylate cyclase [Exiguobacterium sp. AT1b]
Length = 299
Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 67 SPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLP 126
+PS S +H GN+++ Y+ + K + +++SP L + GE V+ S S +
Sbjct: 26 APSLSFMHFGNQTKDVIYIFETKPTWRFRYISPS------LDLYLGEGTVMRSYSDAQEC 79
Query: 127 NRRFNPNPH-----TIPAPIQTADGFLRRLLNPNG 156
RR +P+ + + + L+R +G
Sbjct: 80 FRRIHPDDRRLLLDKVAGRVNYEEAILQRWRTNDG 114
>gi|75675595|ref|YP_318016.1| SmpA/OmlA [Nitrobacter winogradskyi Nb-255]
gi|74420465|gb|ABA04664.1| SmpA/OmlA [Nitrobacter winogradskyi Nb-255]
Length = 166
Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 48 AISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVL 107
A+ + G+S+ V+ +G+PS NG + FYY+SQ+ + V F+ K+++ V+
Sbjct: 60 ALEQIQIGASQDQVLIVMGTPSTVATLNG---EVFYYISQRAER-KVAFMPQKVIDQRVI 115
Query: 108 KITF 111
I F
Sbjct: 116 AIYF 119
>gi|262279513|ref|ZP_06057298.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262259864|gb|EEY78597.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 142
Score = 34.3 bits (77), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 38 SISGASLDMSA-------ISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKK 90
S+SG S+ M+ +++++ GSSR++VI G+P S +G R + + + K
Sbjct: 16 SMSGCSVFMAGNQPSKKNVNVLNPGSSRNYVIAEFGAPVLSEYRDGTRVEIYTFQQGYSK 75
Query: 91 WFPV 94
W V
Sbjct: 76 WVKV 79
>gi|85710344|ref|ZP_01041409.1| tmRNA-binding small protein A [Erythrobacter sp. NAP1]
gi|85689054|gb|EAQ29058.1| tmRNA-binding small protein A [Erythrobacter sp. NAP1]
Length = 161
Score = 34.3 bits (77), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 23 IIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIES-LGSPSFSILHNGNRSQS 81
++ +G S G ++ A L ++ V G +E LG P+F + N +
Sbjct: 21 VLALGACSSIRESRGFVNDAVL----VNSVQPGIDNRRSVEGMLGRPTFESQYGEN---T 73
Query: 82 FYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVS 121
+YY+S P F+ P+I ++ V+ I F E+G V+++
Sbjct: 74 WYYISSITGRRP--FVRPRIRDHSVMAIRFDEEGNVATIE 111
>gi|157872481|ref|XP_001684785.1| hypothetical protein [Leishmania major strain Friedlin]
gi|68127855|emb|CAJ06335.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 5561
Score = 33.9 bits (76), Expect = 6.8, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 17 FNKALFIIVIGLVVDYHVSYGSISGAS--LDMSAISLVSQGSSRSHVIESLGSPSFSILH 74
F++ + ++V G+ V + GS + A LD SA+S R V+ + S SIL+
Sbjct: 4780 FSREVKMLVCGVEVPFLSVSGSCADAEVHLDTSALSF------RDVVVGASASRRVSILN 4833
Query: 75 NGNRSQSFYYVSQKKKWFP 93
+GN SQ F ++S +K P
Sbjct: 4834 SGNISQKFSWLSSLQKLRP 4852
>gi|85716277|ref|ZP_01047251.1| SmpA/OmlA [Nitrobacter sp. Nb-311A]
gi|85696949|gb|EAQ34833.1| SmpA/OmlA [Nitrobacter sp. Nb-311A]
Length = 166
Score = 33.9 bits (76), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 48 AISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVL 107
A+ + G+S+ V+ +G+PS NG + FYY+SQ+ + V F+ K+++ V+
Sbjct: 60 ALEQIQIGASQDQVLIVMGTPSTVATLNG---EVFYYISQRAER-KVSFMPQKVIDQRVI 115
Query: 108 KITFGEKGVVSSVS 121
+ F + V+ ++
Sbjct: 116 AVYFDKNRQVTRLA 129
>gi|89898242|ref|YP_515352.1| tryptophan synthase subunit alpha [Chlamydophila felis Fe/C-56]
gi|123483448|sp|Q254T1|TRPA_CHLFF RecName: Full=Tryptophan synthase alpha chain
gi|89331614|dbj|BAE81207.1| tryptophan synthase alpha chain [Chlamydophila felis Fe/C-56]
Length = 257
Score = 33.9 bits (76), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 51 LVSQGSSRSHVIESLG-----SPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYI 105
L+ +G H +++ G + I N N S+SF+ + K FP+ ++P E
Sbjct: 100 LLQKGPQYLHQLKAAGFDAVLTVDLPIPRNANESESFFQALMEAKLFPILLVTPSTQEER 159
Query: 106 VLKITFGEKGVVSSVS 121
+L+I+ KG + VS
Sbjct: 160 LLQISKLAKGFLYYVS 175
>gi|320352684|ref|YP_004194023.1| polysaccharide biosynthesis protein [Desulfobulbus propionicus DSM
2032]
gi|320121186|gb|ADW16732.1| polysaccharide biosynthesis protein [Desulfobulbus propionicus DSM
2032]
Length = 447
Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 48 AISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQK 88
A+ L + S + I S+ +P FS L +GNR + +YV++K
Sbjct: 277 AVKLATLTSFALNAINSMAAPKFSELFHGNRMEELFYVAKK 317
Searching..................................................done
Results from round 2
>gi|254780500|ref|YP_003064913.1| hypothetical protein CLIBASIA_01935 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040177|gb|ACT56973.1| hypothetical protein CLIBASIA_01935 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 159
Score = 208 bits (528), Expect = 3e-52, Method: Composition-based stats.
Identities = 159/159 (100%), Positives = 159/159 (100%)
Query: 1 MKKILFLNNFFFGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSH 60
MKKILFLNNFFFGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSH
Sbjct: 1 MKKILFLNNFFFGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSH 60
Query: 61 VIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV 120
VIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV
Sbjct: 61 VIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV 120
Query: 121 SMERLPNRRFNPNPHTIPAPIQTADGFLRRLLNPNGRSA 159
SMERLPNRRFNPNPHTIPAPIQTADGFLRRLLNPNGRSA
Sbjct: 121 SMERLPNRRFNPNPHTIPAPIQTADGFLRRLLNPNGRSA 159
>gi|150396049|ref|YP_001326516.1| SmpA/OmlA domain-containing protein [Sinorhizobium medicae WSM419]
gi|150027564|gb|ABR59681.1| SmpA/OmlA domain protein [Sinorhizobium medicae WSM419]
Length = 168
Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 6/156 (3%)
Query: 2 KKILFLNNFFFGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHV 61
K+ L N G+ +L + + +V G +D ++LV GSSR V
Sbjct: 3 KRYLTTNLKVLGRAVLVASLCTTALSACMSANVGEVLHQGYVVDQETLALVPVGSSREQV 62
Query: 62 IESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVS 121
+ SLG+PS + + ++ FYY+SQ +K PV F+ PKI++ +L + F ++G VS ++
Sbjct: 63 LLSLGTPSTTATFD---NEVFYYISQTRKR-PVAFMKPKIVDQSILAVYFDKEGTVSQLA 118
Query: 122 MERLPNRR-FNPNPHTIPAPIQTADGFLRRLLNPNG 156
+ + + F+ T P + FL +LL+ G
Sbjct: 119 HYTMKDGKVFDMLSRTTPTGGKETS-FLGQLLSGPG 153
>gi|15964972|ref|NP_385325.1| hypothetical protein SMc01781 [Sinorhizobium meliloti 1021]
gi|307301043|ref|ZP_07580812.1| SmpA/OmlA domain protein [Sinorhizobium meliloti BL225C]
gi|307317777|ref|ZP_07597215.1| SmpA/OmlA domain protein [Sinorhizobium meliloti AK83]
gi|15074151|emb|CAC45798.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
gi|306896539|gb|EFN27287.1| SmpA/OmlA domain protein [Sinorhizobium meliloti AK83]
gi|306903998|gb|EFN34584.1| SmpA/OmlA domain protein [Sinorhizobium meliloti BL225C]
Length = 168
Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 79/156 (50%), Gaps = 6/156 (3%)
Query: 2 KKILFLNNFFFGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHV 61
K+ L N G+ +L + + +V G +D ++LV GSSR V
Sbjct: 3 KRYLTTNLKVLGRAVLVASLCTTALSACMSANVGEVLHQGYVVDQETLALVPVGSSREQV 62
Query: 62 IESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVS 121
+ SLG+PS + + ++ FYY+SQ +K PV F+ PKI++ +L + F ++G VS ++
Sbjct: 63 LLSLGTPSTTATFD---NEVFYYISQTRKR-PVAFMKPKIIDQSILAVYFDKEGTVSQLA 118
Query: 122 MERLPNRR-FNPNPHTIPAPIQTADGFLRRLLNPNG 156
+ + + F+ T P + + FL +LL+ G
Sbjct: 119 HYTMKDGKVFDMLTRTTPTGGKESS-FLGQLLSGPG 153
>gi|227821541|ref|YP_002825511.1| putative outer membrane protein [Sinorhizobium fredii NGR234]
gi|227340540|gb|ACP24758.1| putative outer membrane protein [Sinorhizobium fredii NGR234]
Length = 168
Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats.
Identities = 47/156 (30%), Positives = 79/156 (50%), Gaps = 6/156 (3%)
Query: 2 KKILFLNNFFFGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHV 61
K+ L N G+ +L V+ +V G +D ++LV GSSR V
Sbjct: 3 KRYLTSNLKVLGRAVVVASLCTGVLAGCQAANVGEVLHQGYVVDQETLNLVPVGSSREQV 62
Query: 62 IESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVS 121
+ SLG+PS + + ++ FYY+SQK+K PV F+ PK+++ +L + F ++GVVS ++
Sbjct: 63 LLSLGTPSTTATFD---NEVFYYISQKRKR-PVAFMKPKLIDQSILAVYFDKEGVVSQLA 118
Query: 122 MERLPNRR-FNPNPHTIPAPIQTADGFLRRLLNPNG 156
+ + + F+ T P + FL +LL G
Sbjct: 119 HYTMKDGKVFDMLSRTTPTGGKETS-FLGQLLTGPG 153
>gi|315122313|ref|YP_004062802.1| hypothetical protein CKC_02825 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495715|gb|ADR52314.1| hypothetical protein CKC_02825 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 166
Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats.
Identities = 77/160 (48%), Positives = 101/160 (63%), Gaps = 6/160 (3%)
Query: 4 ILFLNNFFFGKLSFNKALFIIVIGLV--VDYHVSYG---SISGASLDMSAISLVSQGSSR 58
+L LNNF F L NK + I ++ + + HVS+G S+ G LD + +SL+ + SSR
Sbjct: 1 MLLLNNFLFKHLFLNKVILIALLLTISMGNLHVSHGEDNSVGGVVLDQALLSLIHRQSSR 60
Query: 59 SHVIESLGSPSFSILHNGNRS-QSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVV 117
HVI++LGSPSF+I N QSFYYVSQKKK FP FL P I VLKI FG++G+V
Sbjct: 61 EHVIQTLGSPSFTIFDPHNYGMQSFYYVSQKKKIFPFHFLRPTITNRTVLKIVFGKEGLV 120
Query: 118 SSVSMERLPNRRFNPNPHTIPAPIQTADGFLRRLLNPNGR 157
S +S++ L +RRFNPN H PI F RLLNP+ +
Sbjct: 121 SKISIQSLKDRRFNPNQHETTVPITKESDFFDRLLNPDKK 160
>gi|327189789|gb|EGE56930.1| SmpA/OmlA domain protein [Rhizobium etli CNPAF512]
Length = 175
Score = 173 bits (438), Expect = 7e-42, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 11/162 (6%)
Query: 1 MKKILFLNNFFFGKLSFNKALFIIVIGLVVDYHVSYGSI--SGASLDMSAISLVSQGSSR 58
MKK F ++ K N A+ I+ G++ G D +++LV +GSSR
Sbjct: 1 MKKRYFKSDM---KFFSNAAIAFIIASTTALSGCQTGTVLNGGYVADQQSLNLVPEGSSR 57
Query: 59 SHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVS 118
+ SLG+PS + +G + FYY+SQ++ V F K+++ VL I F + GVVS
Sbjct: 58 EQALLSLGTPSTTATFDG---EVFYYISQRRTR-SVAFQKLKVVDQSVLAIYFDKDGVVS 113
Query: 119 SVSMERLPNRR-FNPNPHTIPAPIQTADGFLRRLLNPNGRSA 159
+ L + + F+ P + FL+++L+ ++
Sbjct: 114 RRANYTLQDGKVFDTIGRVTPTGGKELT-FLQQMLSGGSAAS 154
>gi|13476948|ref|NP_108518.1| hypothetical protein mll8419 [Mesorhizobium loti MAFF303099]
gi|14027711|dbj|BAB54304.1| mll8419 [Mesorhizobium loti MAFF303099]
Length = 226
Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 69/133 (51%), Gaps = 6/133 (4%)
Query: 28 LVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQ 87
++ D S G D A+ V GSSR V+ +LG+PS + + +++FYY+SQ
Sbjct: 90 MIGDLSPSETFTQGYVYDQQAVDSVPVGSSREQVLLALGTPSTTATFD---NEAFYYISQ 146
Query: 88 KKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTADG 146
+K + V F P++++ VL + FG G V+ ++ + + + F+ T P + +
Sbjct: 147 TRKRY-VAFDKPRLVDQKVLAVYFGADGRVTQIANYGMKDGKIFDFISRTTPTGGKDQN- 204
Query: 147 FLRRLLNPNGRSA 159
FL +++N + A
Sbjct: 205 FLGQIINGASKLA 217
>gi|241204017|ref|YP_002975113.1| SmpA/OmlA domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240857907|gb|ACS55574.1| SmpA/OmlA domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 177
Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats.
Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 1 MKKILFLNNFFFGKLSFNKALFIIVIGLVVDYHVSYGSI--SGASLDMSAISLVSQGSSR 58
+KK F ++ K N A+ +I+ ++ G D +++LV +GSSR
Sbjct: 3 LKKRYFKSDM---KFFSNAAIALIIASTTALSGCQTSTVLNGGYVADQQSLNLVPEGSSR 59
Query: 59 SHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVS 118
V+ SLG+PS + +G + FYY+SQ++ V F K+++ VL I F + GVVS
Sbjct: 60 EQVLLSLGTPSTTATFDG---EVFYYISQRRTR-AVAFQKLKVVDQSVLAIYFDKDGVVS 115
Query: 119 SVSMERLPNRR-FNPNPHTIPAPIQTADGFLRRLLNPNGRSA 159
+ L + + F+ P + FL+++L+ ++
Sbjct: 116 RRANYALQDGKVFDTIGRVTPTGGKELT-FLQQMLSGGSAAS 156
>gi|222085518|ref|YP_002544048.1| hypothetical protein Arad_1765 [Agrobacterium radiobacter K84]
gi|221722966|gb|ACM26122.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 169
Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 12/159 (7%)
Query: 1 MKKILFLNNFFFGKLSFNKALFIIVIGLVVDYHVSYGSI--SGASLDMSAISLVSQGSSR 58
+KK F ++ + + A +VIG + +G D +++LV GSSR
Sbjct: 3 LKKRYFKSD----RTFISSAAIALVIGTAGLTSCKTTEVMNNGYIFDQQSLNLVPVGSSR 58
Query: 59 SHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVS 118
V+ SLG+PS + +G + FYY+SQK+ F+ PK+++ +L I F + G+V
Sbjct: 59 EQVLLSLGTPSTTATFDG---EVFYYISQKRTR-AAAFMKPKLVDQNILAIYFDKDGIVK 114
Query: 119 SVSMERLPNRR-FNPNPHTIPAPIQTADGFLRRLLNPNG 156
+ L + R F+ T P + FL+++L G
Sbjct: 115 QEANYTLKDGRVFDMISRTTPTGGRDIT-FLQQILQGGG 152
>gi|325292549|ref|YP_004278413.1| hypothetical protein AGROH133_05409 [Agrobacterium sp. H13-3]
gi|325060402|gb|ADY64093.1| hypothetical protein AGROH133_05409 [Agrobacterium sp. H13-3]
Length = 176
Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 13 GKLSFNKALFIIVIGLVVDYHVSYGSI--SGASLDMSAISLVSQGSSRSHVIESLGSPSF 70
GK+ A+ I+V ++ S + +G +D ++ L+ +GSSR V+ ++G+PS
Sbjct: 18 GKILGKTAIAIVVASTLLSACTSTTDVFHNGYVMDEQSLQLIPEGSSREQVLLTMGTPST 77
Query: 71 SILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR- 129
+ ++ FYY+SQK+ F+ P ++E +L I F + GV+ + L + +
Sbjct: 78 TATF---GNEVFYYISQKRVRRA-AFMKPTLVEQNILAIYFNKDGVIERKANYALQDGKV 133
Query: 130 FNPNPHTIPAPIQTADGFLRRLLNPNGRSA 159
F+ T P + FL++LL+ A
Sbjct: 134 FDTISRTTPTGGKDLT-FLQQLLSGGTSGA 162
>gi|239831598|ref|ZP_04679927.1| SmpA/OmlA domain-containing protein [Ochrobactrum intermedium LMG
3301]
gi|239823865|gb|EEQ95433.1| SmpA/OmlA domain-containing protein [Ochrobactrum intermedium LMG
3301]
Length = 171
Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 10/163 (6%)
Query: 1 MKKILFLNNFFFGKLSFNKALFIIVIG----LVVDYHVSYGSISGASLDMSAISLVSQGS 56
M + +F + L A+ + V + S G LD +A+ V GS
Sbjct: 1 MLQRIFPSMRTQRALLAGTAILVSVALAGCNTASTLNPSETLTEGYVLDQNALDSVPVGS 60
Query: 57 SRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGV 116
SR V+ +LG+PS + + ++ FYY+SQK+ + +F+ PKI+E +L I F + G
Sbjct: 61 SREQVLLALGTPSTTATFD---NEVFYYISQKR-YRAAQFMKPKIIERQILAIYFDKDGK 116
Query: 117 VSSVSMERLPNRR-FNPNPHTIPAPIQTADGFLRRLLNPNGRS 158
V ++ L + + F+ T P + FL +++ ++
Sbjct: 117 VEHIANYGLKDGKLFDFVSRTTPTGGKDQS-FLGQIIQGVSKA 158
>gi|190891213|ref|YP_001977755.1| outer membrane protein [Rhizobium etli CIAT 652]
gi|190696492|gb|ACE90577.1| putative outer membrane protein [Rhizobium etli CIAT 652]
Length = 177
Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 1 MKKILFLNNFFFGKLSFNKALFIIVIGLVVDYHVSYGSI--SGASLDMSAISLVSQGSSR 58
+KK F ++ K N A+ I+ ++ G +D +++LV +GSSR
Sbjct: 3 LKKRYFKSDM---KFFSNAAIAFIIASTTALSGCQTSTVLNGGYVVDQQSLNLVPEGSSR 59
Query: 59 SHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVS 118
V+ SLG+PS + +G + FYY+SQ++ V F K+++ VL I F + GVV+
Sbjct: 60 EQVLLSLGTPSTTATFDG---EVFYYISQRRTR-AVAFQKLKVVDQTVLAIYFDKGGVVT 115
Query: 119 SVSMERLPNRR-FNPNPHTIPAPIQTADGFLRRLLNPNGRSA 159
+ L + + F+ P + FL+++L+ ++
Sbjct: 116 RRANYTLQDGKVFDTISRVTPTGGKELT-FLQQMLSGGSAAS 156
>gi|237815212|ref|ZP_04594210.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|237790049|gb|EEP64259.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
Length = 214
Score = 171 bits (432), Expect = 4e-41, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 69/140 (49%), Gaps = 6/140 (4%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
++ ++ + S G LD A+ V GSSR V+ +LG+PS + + +
Sbjct: 70 SVALVGCTTASTLNPSETLTEGYVLDQQALDSVPVGSSREQVLLALGTPSTTATFD---N 126
Query: 80 QSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIP 138
+ FYY+SQK+ + +F+ PK++E +L I F + G V ++ L + + F+ T P
Sbjct: 127 EVFYYISQKR-YRAAQFMKPKVIERQILAIYFNKDGKVEHIANYGLKDGKLFDFVSRTTP 185
Query: 139 APIQTADGFLRRLLNPNGRS 158
+ FL +++ ++
Sbjct: 186 TSGKDQT-FLGQIIQGVSKA 204
>gi|225627270|ref|ZP_03785307.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|225617275|gb|EEH14320.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
Length = 214
Score = 170 bits (431), Expect = 5e-41, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
++ + + S G LD A+ V GSSR V+ +LG+PS + + +
Sbjct: 70 SVALAGCTTASTLNPSETLTEGYVLDQQALDSVPVGSSREQVLLALGTPSTTATFD---N 126
Query: 80 QSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIP 138
+ FYY+SQK+ + +F+ PK++E +L I F + G V ++ L + + F+ T P
Sbjct: 127 EVFYYISQKR-YRAAQFMKPKVIERQILAIYFNKDGKVEHIANYGLKDGKLFDFVSRTTP 185
Query: 139 APIQTADGFLRRLLNPNGRS 158
+ FL +++ ++
Sbjct: 186 TSGKDQT-FLGQIIQGVSKA 204
>gi|153009850|ref|YP_001371065.1| SmpA/OmlA domain-containing protein [Ochrobactrum anthropi ATCC
49188]
gi|151561738|gb|ABS15236.1| SmpA/OmlA domain protein [Ochrobactrum anthropi ATCC 49188]
Length = 174
Score = 169 bits (429), Expect = 8e-41, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 13 GKLSFNKALFIIVIG----LVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSP 68
G L A+ + V + S G LD A+ V GSSR V+ +LG+P
Sbjct: 16 GALLAGTAILVAVALAGCNTASTLNPSETLTEGYVLDQGALDSVPVGSSREQVLLALGTP 75
Query: 69 SFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNR 128
S + + ++ FYY+SQK+ + +F+ PKI+E +L I F + G V ++ L +
Sbjct: 76 STTATFD---NEVFYYISQKR-YRAAQFMKPKIIERQILAIYFNKDGKVEHIANYGLKDG 131
Query: 129 R-FNPNPHTIPAPIQTADGFLRRLLNPNGRS 158
+ F+ T P + FL +++ ++
Sbjct: 132 KLFDFVSRTTPTGGKDQT-FLGQIIQGVSKA 161
>gi|209548796|ref|YP_002280713.1| SmpA/OmlA domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209534552|gb|ACI54487.1| SmpA/OmlA domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 177
Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 1 MKKILFLNNFFFGKLSFNKALFIIVIGLVVDYHVSYGSI--SGASLDMSAISLVSQGSSR 58
+KK F ++ KL + A+ +I+ V G++ G D +++LV +GSSR
Sbjct: 3 LKKRYFKSDV---KLFSSAAIALIIASTSVLSGCQTGTVLNGGYVADQQSLNLVPEGSSR 59
Query: 59 SHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVS 118
V+ SLG+PS + +G + FYY+SQ++ V F K+++ VL I F + VVS
Sbjct: 60 EQVLLSLGTPSTTATFDG---EVFYYISQRRTR-AVAFQKLKVVDQSVLAIYFDKDSVVS 115
Query: 119 SVSMERLPNRR-FNPNPHTIPAPIQTADGFLRRLLNPNGRSA 159
+ L + + F+ P + FL+++L+ ++
Sbjct: 116 RRANYTLQDGKVFDTIGRVTPTGGKELT-FLQQMLSGGSAAS 156
>gi|159184649|ref|NP_354193.2| hypothetical protein Atu1175 [Agrobacterium tumefaciens str. C58]
gi|159139947|gb|AAK86978.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 177
Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 13 GKLSFNKALFIIVIGLVVDYHVSYGSI--SGASLDMSAISLVSQGSSRSHVIESLGSPSF 70
GK+ A+ I++ ++ S + +G +D ++ L+ +GSSR V+ ++G+PS
Sbjct: 18 GKILSKTAIAIVLASGLLSACTSTTDVFHNGYVMDDQSLQLIPEGSSREQVLLTMGTPST 77
Query: 71 SILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR- 129
+ ++ FYY+SQK+ FL P ++E +L I F + GV+ + L + +
Sbjct: 78 TATF---GNEVFYYISQKRVRRA-AFLKPSLVEQNILAIYFNKDGVIERKANYTLQDGKV 133
Query: 130 FNPNPHTIPAPIQTADGFLRRLLNPNGRSA 159
F+ T P + FL++LL+ A
Sbjct: 134 FDSISRTTPTGGKDLT-FLQQLLSGGTSGA 162
>gi|319784149|ref|YP_004143625.1| SmpA/OmlA domain-containing protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317170037|gb|ADV13575.1| SmpA/OmlA domain-containing protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 170
Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 71/133 (53%), Gaps = 6/133 (4%)
Query: 28 LVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQ 87
++ D S G +D AI LV GSSR V+ +LG+PS + + +++FYY+SQ
Sbjct: 35 MIGDLSPSETLTQGYVIDQQAIDLVPVGSSREQVLLALGTPSTTATFD---NEAFYYISQ 91
Query: 88 KKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTADG 146
+K + V F P++++ VL + FG G V+ ++ + + + F+ T P + +
Sbjct: 92 TRKRY-VAFDKPRLIDQHVLAVYFGADGRVTQIANYGMKDGKMFDFISRTTPTGGKDQN- 149
Query: 147 FLRRLLNPNGRSA 159
FL +++N + A
Sbjct: 150 FLSQIINGASKLA 162
>gi|86357166|ref|YP_469058.1| hypothetical protein RHE_CH01528 [Rhizobium etli CFN 42]
gi|86281268|gb|ABC90331.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 166
Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 75/149 (50%), Gaps = 8/149 (5%)
Query: 14 KLSFNKALFIIVIGLVVDYHVSYGSI--SGASLDMSAISLVSQGSSRSHVIESLGSPSFS 71
K + A+ I+ V G++ G +D +++LV +GSSR V+ SLG+PS +
Sbjct: 2 KFFSSAAIAFIIASTSVLSGCQTGTVLNGGYVVDQQSLNLVPEGSSREQVLLSLGTPSTT 61
Query: 72 ILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-F 130
+G + FYY+SQ++ V F K+++ VL I F + GVV+ + L + + F
Sbjct: 62 ATFDG---EVFYYISQRRTR-AVAFQKLKVVDQSVLAIYFDKDGVVTRRANYTLQDGKVF 117
Query: 131 NPNPHTIPAPIQTADGFLRRLLNPNGRSA 159
+ P + FL+++L+ ++
Sbjct: 118 DTISRVTPTGGKELT-FLQQMLSGGSAAS 145
>gi|148559645|ref|YP_001258751.1| hypothetical protein BOV_0765 [Brucella ovis ATCC 25840]
gi|148370902|gb|ABQ60881.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
Length = 214
Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
++ + + S G LD A+ V GSSR V+ +LG+PS + + +
Sbjct: 70 SVALAGCTTASTLNPSETLTEGYVLDQQALDSVPVGSSREQVLLALGTPSTTATFD---N 126
Query: 80 QSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIP 138
+ FYY+SQK+ + + + PK++E +L I F + G V ++ L + + F+ T P
Sbjct: 127 EVFYYISQKR-YRAAQLMKPKVIERQILAIYFNKDGKVEHIANYGLKDGKLFDFVSRTTP 185
Query: 139 APIQTADGFLRRLLNPNGRS 158
+ FL +++ ++
Sbjct: 186 TSGKDQT-FLGQIIQGVSKA 204
>gi|260460939|ref|ZP_05809189.1| SmpA/OmlA domain protein [Mesorhizobium opportunistum WSM2075]
gi|259033516|gb|EEW34777.1| SmpA/OmlA domain protein [Mesorhizobium opportunistum WSM2075]
Length = 171
Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 80/167 (47%), Gaps = 13/167 (7%)
Query: 1 MKKILFLNNFFFGKLSFNKALFIIVIG-------LVVDYHVSYGSISGASLDMSAISLVS 53
M+ + F + F G L ++ ++ D S G D A+ V
Sbjct: 1 MRALNFKSTFTSGPAGAISLLLVVSALSACHTSKMIGDLSPSETLTQGYVYDQQAVDSVP 60
Query: 54 QGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGE 113
GSSR V+ +LG+PS + + +++FYY+SQ +K + V F P++++ VL + FG+
Sbjct: 61 VGSSREQVLLALGTPSTTATFD---NEAFYYISQTRKRY-VAFDKPRLIDQKVLAVYFGD 116
Query: 114 KGVVSSVSMERLPNRR-FNPNPHTIPAPIQTADGFLRRLLNPNGRSA 159
G V+ ++ + + + F+ T P + + FL +++N + A
Sbjct: 117 DGRVTQIANYGMKDGKIFDFISRTTPTGGKDQN-FLSQIINGASKLA 162
>gi|222148212|ref|YP_002549169.1| hypothetical protein Avi_1624 [Agrobacterium vitis S4]
gi|221735200|gb|ACM36163.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 230
Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 78/161 (48%), Gaps = 10/161 (6%)
Query: 1 MKKILFLNNFFFGKLSFNKALFIIVIGLVVDYHVS-YGSISGASLDMSAISLVSQGSSRS 59
+K+ F + + A+ +++ + + +G +D A+ LV G+SR
Sbjct: 68 LKRRYFRPD---ARAIGLAAMTLLIATGGLTGCTTGEVFHNGYIVDPKALDLVPVGASRE 124
Query: 60 HVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSS 119
V+ SLG+PS + +G + FYY+SQ +K PV F+ ++++ VL I F + G V
Sbjct: 125 QVLLSLGTPSTTATFDG---EVFYYISQTRKR-PVAFMKQQLVDQQVLAIYFDKNGTVVQ 180
Query: 120 VSMERLPNRR-FNPNPHTIPAPIQTADGFLRRLLNPNGRSA 159
+ + + + F+ T P + FL+++L+ +A
Sbjct: 181 RANYSMKDGKVFDMVSRTTPTGGKDLS-FLQQILSGGNGAA 220
>gi|116251401|ref|YP_767239.1| outer membrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115256049|emb|CAK07130.1| putative outer membrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 177
Score = 166 bits (421), Expect = 7e-40, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 11/162 (6%)
Query: 1 MKKILFLNNFFFGKLSFNKALFIIVIGLVVDYHVSYGSI--SGASLDMSAISLVSQGSSR 58
+ K F ++ K + A+ I+ ++ G D +++LV +GSSR
Sbjct: 3 LNKRYFKSDV---KFFSSAAIAFIIASTTALSGCQTSTVLNGGYVADQQSLNLVPEGSSR 59
Query: 59 SHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVS 118
V+ SLG+PS + +G + FYY+SQ++ V F K+++ VL I F + GVV+
Sbjct: 60 EQVLLSLGTPSTTATFDG---EVFYYISQRRTR-AVAFQKLKVVDQSVLAIYFDKDGVVN 115
Query: 119 SVSMERLPNRR-FNPNPHTIPAPIQTADGFLRRLLNPNGRSA 159
+ L + + F+ P + FL+++L+ ++
Sbjct: 116 RRANYALQDGKVFDTIGRVTPTGGKELT-FLQQMLSGGSAAS 156
>gi|62289724|ref|YP_221517.1| hypothetical protein BruAb1_0788 [Brucella abortus bv. 1 str.
9-941]
gi|82699653|ref|YP_414227.1| SmpA/OmlA [Brucella melitensis biovar Abortus 2308]
gi|260545523|ref|ZP_05821264.1| SmpA/OmlA protein [Brucella abortus NCTC 8038]
gi|260754528|ref|ZP_05866876.1| SmpA/OmlA domain-containing protein [Brucella abortus bv. 6 str.
870]
gi|260757749|ref|ZP_05870097.1| SmpA/OmlA domain-containing protein [Brucella abortus bv. 4 str.
292]
gi|260761574|ref|ZP_05873917.1| SmpA/OmlA domain-containing protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883556|ref|ZP_05895170.1| SmpA/OmlA domain-containing protein [Brucella abortus bv. 9 str.
C68]
gi|261213776|ref|ZP_05928057.1| SmpA/OmlA domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
gi|297248129|ref|ZP_06931847.1| SmpA/OmlA domain-containing protein [Brucella abortus bv. 5 str.
B3196]
gi|62195856|gb|AAX74156.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82615754|emb|CAJ10750.1| SmpA/OmlA [Brucella melitensis biovar Abortus 2308]
gi|260096930|gb|EEW80805.1| SmpA/OmlA protein [Brucella abortus NCTC 8038]
gi|260668067|gb|EEX55007.1| SmpA/OmlA domain-containing protein [Brucella abortus bv. 4 str.
292]
gi|260672006|gb|EEX58827.1| SmpA/OmlA domain-containing protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260674636|gb|EEX61457.1| SmpA/OmlA domain-containing protein [Brucella abortus bv. 6 str.
870]
gi|260873084|gb|EEX80153.1| SmpA/OmlA domain-containing protein [Brucella abortus bv. 9 str.
C68]
gi|260915383|gb|EEX82244.1| SmpA/OmlA domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
gi|297175298|gb|EFH34645.1| SmpA/OmlA domain-containing protein [Brucella abortus bv. 5 str.
B3196]
Length = 172
Score = 166 bits (419), Expect = 1e-39, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 69/140 (49%), Gaps = 6/140 (4%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
++ ++ + S G LD A+ V GSSR V+ +LG+PS + + +
Sbjct: 28 SVALVGCTTASTLNPSETLTEGYVLDQQALDSVPVGSSREQVLLALGTPSTTATFD---N 84
Query: 80 QSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIP 138
+ FYY+SQK+ + +F+ PK++E +L I F + G V ++ L + + F+ T P
Sbjct: 85 EVFYYISQKR-YRAAQFMKPKVIERQILAIYFNKDGKVEHIANYGLKDGKLFDFVSRTTP 143
Query: 139 APIQTADGFLRRLLNPNGRS 158
+ FL +++ ++
Sbjct: 144 TSGKDQT-FLGQIIQGVSKA 162
>gi|189023973|ref|YP_001934741.1| SmpA/OmlA [Brucella abortus S19]
gi|254689033|ref|ZP_05152287.1| SmpA/OmlA [Brucella abortus bv. 6 str. 870]
gi|254693516|ref|ZP_05155344.1| SmpA/OmlA [Brucella abortus bv. 3 str. Tulya]
gi|254697168|ref|ZP_05158996.1| SmpA/OmlA [Brucella abortus bv. 2 str. 86/8/59]
gi|254730064|ref|ZP_05188642.1| SmpA/OmlA [Brucella abortus bv. 4 str. 292]
gi|256257283|ref|ZP_05462819.1| SmpA/OmlA [Brucella abortus bv. 9 str. C68]
gi|189019545|gb|ACD72267.1| SmpA/OmlA [Brucella abortus S19]
Length = 167
Score = 166 bits (419), Expect = 1e-39, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 69/140 (49%), Gaps = 6/140 (4%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
++ ++ + S G LD A+ V GSSR V+ +LG+PS + + +
Sbjct: 23 SVALVGCTTASTLNPSETLTEGYVLDQQALDSVPVGSSREQVLLALGTPSTTATFD---N 79
Query: 80 QSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIP 138
+ FYY+SQK+ + +F+ PK++E +L I F + G V ++ L + + F+ T P
Sbjct: 80 EVFYYISQKR-YRAAQFMKPKVIERQILAIYFNKDGKVEHIANYGLKDGKLFDFVSRTTP 138
Query: 139 APIQTADGFLRRLLNPNGRS 158
+ FL +++ ++
Sbjct: 139 TSGKDQT-FLGQIIQGVSKA 157
>gi|161618739|ref|YP_001592626.1| SmpA/OmlA domain-containing protein [Brucella canis ATCC 23365]
gi|163843043|ref|YP_001627447.1| SmpA/OmlA domain-containing protein [Brucella suis ATCC 23445]
gi|225852288|ref|YP_002732521.1| SmpA/OmlA domain-containing protein [Brucella melitensis ATCC
23457]
gi|161335550|gb|ABX61855.1| SmpA/OmlA domain protein [Brucella canis ATCC 23365]
gi|163673766|gb|ABY37877.1| SmpA/OmlA domain protein [Brucella suis ATCC 23445]
gi|225640653|gb|ACO00567.1| SmpA/OmlA domain protein [Brucella melitensis ATCC 23457]
gi|326408792|gb|ADZ65857.1| SmpA/OmlA domain-containing protein [Brucella melitensis M28]
gi|326538510|gb|ADZ86725.1| SmpA/OmlA domain protein [Brucella melitensis M5-90]
Length = 168
Score = 166 bits (419), Expect = 1e-39, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 10/163 (6%)
Query: 1 MKKILFLNNFFFGKLSFNKALFIIVI----GLVVDYHVSYGSISGASLDMSAISLVSQGS 56
M + F L A+ + V + S G LD A+ V GS
Sbjct: 1 MLQRFFPGARKQRALLAGTAILVSVALAGCTTASTLNPSETLTEGYVLDQQALDSVPVGS 60
Query: 57 SRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGV 116
SR V+ +LG+PS + + ++ FYY+SQK+ + +F+ PK++E +L I F + G
Sbjct: 61 SREQVLLALGTPSTTATFD---NEVFYYISQKR-YRAAQFMKPKVIERQILAIYFNKDGK 116
Query: 117 VSSVSMERLPNRR-FNPNPHTIPAPIQTADGFLRRLLNPNGRS 158
V ++ L + + F+ T P + FL +++ ++
Sbjct: 117 VEHIANYGLKDGKLFDFVSRTTPTSGKDQT-FLGQIIQGVSKA 158
>gi|23501659|ref|NP_697786.1| hypothetical protein BR0772 [Brucella suis 1330]
gi|256369204|ref|YP_003106712.1| SmpA/OmlA domain-containing protein [Brucella microti CCM 4915]
gi|260563809|ref|ZP_05834295.1| SmpA/OmlA family protein [Brucella melitensis bv. 1 str. 16M]
gi|260566658|ref|ZP_05837128.1| SmpA/OmlA family protein [Brucella suis bv. 4 str. 40]
gi|261218866|ref|ZP_05933147.1| SmpA/OmlA domain-containing protein [Brucella ceti M13/05/1]
gi|261221966|ref|ZP_05936247.1| SmpA/OmlA domain-containing protein [Brucella ceti B1/94]
gi|261314472|ref|ZP_05953669.1| SmpA/OmlA domain-containing protein [Brucella pinnipedialis
M163/99/10]
gi|261317428|ref|ZP_05956625.1| SmpA/OmlA domain-containing protein [Brucella pinnipedialis B2/94]
gi|261321635|ref|ZP_05960832.1| SmpA/OmlA domain-containing protein [Brucella ceti M644/93/1]
gi|261752095|ref|ZP_05995804.1| SmpA/OmlA domain-containing protein [Brucella suis bv. 5 str. 513]
gi|261754754|ref|ZP_05998463.1| SmpA/OmlA domain-containing protein [Brucella suis bv. 3 str. 686]
gi|261757982|ref|ZP_06001691.1| SmpA/OmlA family protein [Brucella sp. F5/99]
gi|265988465|ref|ZP_06101022.1| SmpA/OmlA domain-containing protein [Brucella pinnipedialis
M292/94/1]
gi|265990879|ref|ZP_06103436.1| SmpA/OmlA domain-containing protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265994715|ref|ZP_06107272.1| SmpA/OmlA domain-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|265997929|ref|ZP_06110486.1| SmpA/OmlA domain-containing protein [Brucella ceti M490/95/1]
gi|265999512|ref|ZP_05466739.2| SmpA/OmlA [Brucella melitensis bv. 2 str. 63/9]
gi|294852133|ref|ZP_06792806.1| hypothetical protein BAZG_01050 [Brucella sp. NVSL 07-0026]
gi|23347579|gb|AAN29701.1| conserved hypothetical protein [Brucella suis 1330]
gi|255999364|gb|ACU47763.1| SmpA/OmlA domain-containing protein [Brucella microti CCM 4915]
gi|260153825|gb|EEW88917.1| SmpA/OmlA family protein [Brucella melitensis bv. 1 str. 16M]
gi|260156176|gb|EEW91256.1| SmpA/OmlA family protein [Brucella suis bv. 4 str. 40]
gi|260920550|gb|EEX87203.1| SmpA/OmlA domain-containing protein [Brucella ceti B1/94]
gi|260923955|gb|EEX90523.1| SmpA/OmlA domain-containing protein [Brucella ceti M13/05/1]
gi|261294325|gb|EEX97821.1| SmpA/OmlA domain-containing protein [Brucella ceti M644/93/1]
gi|261296651|gb|EEY00148.1| SmpA/OmlA domain-containing protein [Brucella pinnipedialis B2/94]
gi|261303498|gb|EEY06995.1| SmpA/OmlA domain-containing protein [Brucella pinnipedialis
M163/99/10]
gi|261737966|gb|EEY25962.1| SmpA/OmlA family protein [Brucella sp. F5/99]
gi|261741848|gb|EEY29774.1| SmpA/OmlA domain-containing protein [Brucella suis bv. 5 str. 513]
gi|261744507|gb|EEY32433.1| SmpA/OmlA domain-containing protein [Brucella suis bv. 3 str. 686]
gi|262552397|gb|EEZ08387.1| SmpA/OmlA domain-containing protein [Brucella ceti M490/95/1]
gi|262765828|gb|EEZ11617.1| SmpA/OmlA domain-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|263001663|gb|EEZ14238.1| SmpA/OmlA domain-containing protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263094451|gb|EEZ18273.1| SmpA/OmlA [Brucella melitensis bv. 2 str. 63/9]
gi|264660662|gb|EEZ30923.1| SmpA/OmlA domain-containing protein [Brucella pinnipedialis
M292/94/1]
gi|294820722|gb|EFG37721.1| hypothetical protein BAZG_01050 [Brucella sp. NVSL 07-0026]
Length = 172
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
++ + + S G LD A+ V GSSR V+ +LG+PS + + +
Sbjct: 28 SVALAGCTTASTLNPSETLTEGYVLDQQALDSVPVGSSREQVLLALGTPSTTATFD---N 84
Query: 80 QSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIP 138
+ FYY+SQK+ + +F+ PK++E +L I F + G V ++ L + + F+ T P
Sbjct: 85 EVFYYISQKR-YRAAQFMKPKVIERQILAIYFNKDGKVEHIANYGLKDGKLFDFVSRTTP 143
Query: 139 APIQTADGFLRRLLNPNGRS 158
+ FL +++ ++
Sbjct: 144 TSGKDQT-FLGQIIQGVSKA 162
>gi|17987467|ref|NP_540101.1| small protein A [Brucella melitensis bv. 1 str. 16M]
gi|254701546|ref|ZP_05163374.1| hypothetical protein Bsuib55_11915 [Brucella suis bv. 5 str. 513]
gi|254704094|ref|ZP_05165922.1| hypothetical protein Bsuib36_09214 [Brucella suis bv. 3 str. 686]
gi|254707005|ref|ZP_05168833.1| hypothetical protein BpinM_08465 [Brucella pinnipedialis
M163/99/10]
gi|254709886|ref|ZP_05171697.1| hypothetical protein BpinB_06365 [Brucella pinnipedialis B2/94]
gi|254713887|ref|ZP_05175698.1| hypothetical protein BcetM6_11144 [Brucella ceti M644/93/1]
gi|254717056|ref|ZP_05178867.1| hypothetical protein BcetM_11658 [Brucella ceti M13/05/1]
gi|256031379|ref|ZP_05444993.1| hypothetical protein BpinM2_12132 [Brucella pinnipedialis
M292/94/1]
gi|256044458|ref|ZP_05447362.1| hypothetical protein Bmelb1R_08168 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256113302|ref|ZP_05454170.1| hypothetical protein Bmelb3E_11337 [Brucella melitensis bv. 3 str.
Ether]
gi|256159500|ref|ZP_05457268.1| hypothetical protein BcetM4_11092 [Brucella ceti M490/95/1]
gi|256254786|ref|ZP_05460322.1| hypothetical protein BcetB_10909 [Brucella ceti B1/94]
gi|260168512|ref|ZP_05755323.1| SmpA/OmlA domain-containing protein [Brucella sp. F5/99]
gi|306841983|ref|ZP_07474657.1| small protein A [Brucella sp. BO2]
gi|306843716|ref|ZP_07476316.1| small protein A [Brucella sp. BO1]
gi|17983162|gb|AAL52365.1| small protein a [Brucella melitensis bv. 1 str. 16M]
gi|306276026|gb|EFM57735.1| small protein A [Brucella sp. BO1]
gi|306287911|gb|EFM59328.1| small protein A [Brucella sp. BO2]
Length = 167
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
++ + + S G LD A+ V GSSR V+ +LG+PS + + +
Sbjct: 23 SVALAGCTTASTLNPSETLTEGYVLDQQALDSVPVGSSREQVLLALGTPSTTATFD---N 79
Query: 80 QSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIP 138
+ FYY+SQK+ + +F+ PK++E +L I F + G V ++ L + + F+ T P
Sbjct: 80 EVFYYISQKR-YRAAQFMKPKVIERQILAIYFNKDGKVEHIANYGLKDGKLFDFVSRTTP 138
Query: 139 APIQTADGFLRRLLNPNGRS 158
+ FL +++ ++
Sbjct: 139 TSGKDQT-FLGQIIQGVSKA 157
>gi|90419416|ref|ZP_01227326.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90336353|gb|EAS50094.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 154
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 6/142 (4%)
Query: 19 KALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNR 78
+ ++ + + S G +D + LV GSSR V+ +LGSPS + +
Sbjct: 13 ASAAVMAALTLSNCTTSEVLTQGYVIDEKTVELVPVGSSREQVLLALGSPSTTATFD--- 69
Query: 79 SQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTI 137
++ FYY+SQK+ PV F+ P++++ VL + F +G V ++ L + + F+ T
Sbjct: 70 NEVFYYISQKRVR-PVAFMKPQLVDQRVLSVYFDGEGRVERIANYGLQDGQPFDFISRTT 128
Query: 138 PAPIQTADGFLRRLLNPNGRSA 159
P Q FL ++L+ G +
Sbjct: 129 PTGGQDRT-FLGQILSDTGSGS 149
>gi|306838199|ref|ZP_07471053.1| SmpA/OmlA domain-containing protein [Brucella sp. NF 2653]
gi|306406708|gb|EFM62933.1| SmpA/OmlA domain-containing protein [Brucella sp. NF 2653]
Length = 168
Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 10/163 (6%)
Query: 1 MKKILFLNNFFFGKLSFNKALFIIVI----GLVVDYHVSYGSISGASLDMSAISLVSQGS 56
M + F L A+ + V + S G LD A+ V GS
Sbjct: 1 MLQRFFPGVRKQRALLAGTAILVSVALAGCTTASTLNPSETLTEGYMLDQQALDSVPVGS 60
Query: 57 SRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGV 116
SR V+ +LG+PS + + ++ FYY+SQK+ + +F+ PK++E +L I F + G
Sbjct: 61 SREQVLLALGTPSTTATFD---NEVFYYISQKR-YRAAQFMKPKVIERQILAIYFNKDGK 116
Query: 117 VSSVSMERLPNRR-FNPNPHTIPAPIQTADGFLRRLLNPNGRS 158
V ++ L + + F+ T P + FL +++ ++
Sbjct: 117 VEHIANYGLKDGKLFDFVSRTTPTSGKDQT-FLGQIIQGVSKA 158
>gi|265983875|ref|ZP_06096610.1| SmpA/OmlA domain-containing protein [Brucella sp. 83/13]
gi|264662467|gb|EEZ32728.1| SmpA/OmlA domain-containing protein [Brucella sp. 83/13]
Length = 172
Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
++ + + S G LD A+ V GSSR V+ +LG+PS + + +
Sbjct: 28 SVALAGCTTASTLNPSETLTEGYMLDQQALDSVPVGSSREQVLLALGTPSTTATFD---N 84
Query: 80 QSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIP 138
+ FYY+SQK+ + +F+ PK++E +L I F + G V ++ L + + F+ T P
Sbjct: 85 EVFYYISQKR-YRAAQFMKPKVIERQILAIYFNKDGKVEHIANYGLKDGKLFDFVSRTTP 143
Query: 139 APIQTADGFLRRLLNPNGRS 158
+ FL +++ ++
Sbjct: 144 TSGKDQT-FLGQIIQGVSKA 162
>gi|218673693|ref|ZP_03523362.1| SmpA/OmlA domain protein [Rhizobium etli GR56]
Length = 166
Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats.
Identities = 40/149 (26%), Positives = 72/149 (48%), Gaps = 8/149 (5%)
Query: 14 KLSFNKALFIIVIGLVVDYHVSYGSI--SGASLDMSAISLVSQGSSRSHVIESLGSPSFS 71
K + A+ I+ G++ G D +++LV +GSSR + SLG+PS +
Sbjct: 2 KFFSSAAIAFIIASTTALSGCQTGTVLNGGYVADQQSLNLVPEGSSREQALLSLGTPSTT 61
Query: 72 ILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-F 130
+G + FYY+SQ++ V F K+++ VL I F + GVVS + L + + F
Sbjct: 62 ATFDG---EVFYYISQRRTR-SVAFQKLKVVDQSVLAIYFDKDGVVSRRANYTLQDGKVF 117
Query: 131 NPNPHTIPAPIQTADGFLRRLLNPNGRSA 159
+ P + FL+++L+ ++
Sbjct: 118 DTIGRVTPTGGKELT-FLQQMLSGGSAAS 145
>gi|254718890|ref|ZP_05180701.1| hypothetical protein Bru83_05014 [Brucella sp. 83/13]
Length = 167
Score = 164 bits (414), Expect = 4e-39, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
++ + + S G LD A+ V GSSR V+ +LG+PS + + +
Sbjct: 23 SVALAGCTTASTLNPSETLTEGYMLDQQALDSVPVGSSREQVLLALGTPSTTATFD---N 79
Query: 80 QSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIP 138
+ FYY+SQK+ + +F+ PK++E +L I F + G V ++ L + + F+ T P
Sbjct: 80 EVFYYISQKR-YRAAQFMKPKVIERQILAIYFNKDGKVEHIANYGLKDGKLFDFVSRTTP 138
Query: 139 APIQTADGFLRRLLNPNGRS 158
+ FL +++ ++
Sbjct: 139 TSGKDQT-FLGQIIQGVSKA 157
>gi|261324886|ref|ZP_05964083.1| SmpA/OmlA domain-containing protein [Brucella neotomae 5K33]
gi|261300866|gb|EEY04363.1| SmpA/OmlA domain-containing protein [Brucella neotomae 5K33]
Length = 172
Score = 163 bits (412), Expect = 8e-39, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
++ + + S G LD A+ V GSSR V+ +LG+PS + + +
Sbjct: 28 SVALAGCTTASTLNPSETLTEGYVLDQQALDSVPVGSSREQVLLALGTPSTTATFD---N 84
Query: 80 QSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIP 138
+ FYY+SQK+ + + + PK++E +L I F + G V ++ L + + F+ T P
Sbjct: 85 EVFYYISQKR-YRAAQLMKPKVIERQILAIYFNKDGKVEHIANYGLKDGKLFDFVSRTTP 143
Query: 139 APIQTADGFLRRLLNPNGRS 158
+ FL +++ ++
Sbjct: 144 TSGKDQT-FLGQIIQGVSKA 162
>gi|256060888|ref|ZP_05451048.1| hypothetical protein Bneo5_11067 [Brucella neotomae 5K33]
Length = 167
Score = 163 bits (412), Expect = 8e-39, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
++ + + S G LD A+ V GSSR V+ +LG+PS + + +
Sbjct: 23 SVALAGCTTASTLNPSETLTEGYVLDQQALDSVPVGSSREQVLLALGTPSTTATFD---N 79
Query: 80 QSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIP 138
+ FYY+SQK+ + + + PK++E +L I F + G V ++ L + + F+ T P
Sbjct: 80 EVFYYISQKR-YRAAQLMKPKVIERQILAIYFNKDGKVEHIANYGLKDGKLFDFVSRTTP 138
Query: 139 APIQTADGFLRRLLNPNGRS 158
+ FL +++ ++
Sbjct: 139 TSGKDQT-FLGQIIQGVSKA 157
>gi|163759214|ref|ZP_02166300.1| hypothetical protein HPDFL43_05600 [Hoeflea phototrophica DFL-43]
gi|162283618|gb|EDQ33903.1| hypothetical protein HPDFL43_05600 [Hoeflea phototrophica DFL-43]
Length = 156
Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 8/138 (5%)
Query: 22 FIIVIGLVVDYHVSYGSI--SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
+ VI V+ S + G +D +A+ L GSSR V+ SLG+PS + + +
Sbjct: 6 AVAVISTVMLAGCSTSEVLNQGYVVDQTALDLTPVGSSREQVLLSLGTPSTTATFD---N 62
Query: 80 QSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIP 138
+ FYY+SQ++ + F+ P++++ VL + F +G V ++ L + + F+ T P
Sbjct: 63 EVFYYISQRRVRGAM-FMKPRLVDQSVLAVYFDGEGTVERIANYTLQDGKVFDMITRTTP 121
Query: 139 APIQTADGFLRRLLNPNG 156
FL ++L+ G
Sbjct: 122 TGGIDKS-FLAQVLSGVG 138
>gi|110633495|ref|YP_673703.1| SmpA/OmlA [Mesorhizobium sp. BNC1]
gi|110284479|gb|ABG62538.1| SmpA/OmlA [Chelativorans sp. BNC1]
Length = 176
Score = 156 bits (395), Expect = 7e-37, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Query: 30 VDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKK 89
+ G +D A+ LV GSSR V+ +LG+PS + + ++ FYY+SQK+
Sbjct: 37 STLNARETLTQGYVIDPQALELVPVGSSREQVLLALGTPSTTATFD---NEVFYYISQKR 93
Query: 90 KWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTADGFL 148
F++ K+++ VL + FG V+ ++ L + + F+ T P + + F+
Sbjct: 94 VR-GAAFMNAKLVDQQVLAVYFGPDQRVTQIAHYGLQDGKVFDFISRTTPTGGRDQN-FI 151
Query: 149 RRLLNPNGRSA 159
+++ R A
Sbjct: 152 AQMIAGVARGA 162
>gi|114704827|ref|ZP_01437735.1| hypothetical protein FP2506_07821 [Fulvimarina pelagi HTCC2506]
gi|114539612|gb|EAU42732.1| hypothetical protein FP2506_07821 [Fulvimarina pelagi HTCC2506]
Length = 164
Score = 156 bits (395), Expect = 7e-37, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 5/146 (3%)
Query: 9 NFFFGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSP 68
+ + + +G V +G +D + LV +GSSR V +LGSP
Sbjct: 14 LKIATRHVISAIVLSGSLGTVSGCQTGEVLSAGYVIDEQMLQLVPEGSSREQVELALGSP 73
Query: 69 SFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNR 128
S + N Q++YY+SQ+++ V FL+P + VL + F + VS ++ L +
Sbjct: 74 STTATF--NEQQTYYYISQRRERR-VAFLTPSVTNQRVLAVYFNNEDRVSRIANYGLQDG 130
Query: 129 R-FNPNPHTIPAPIQTADGFLRRLLN 153
R F+ T P + A FL ++L
Sbjct: 131 RVFDFISRTTPTGGRDAS-FLGQILG 155
>gi|218658556|ref|ZP_03514486.1| SmpA/OmlA domain protein [Rhizobium etli IE4771]
Length = 164
Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 5/114 (4%)
Query: 33 HVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWF 92
G D ++ LV +GSSR + SLG+PS + +G + FYY+SQ++
Sbjct: 2 QTGTVLNGGYVADQQSLDLVPEGSSREQALLSLGTPSTTATFDG---EVFYYISQRRTR- 57
Query: 93 PVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTAD 145
V F K+++ VL I F + GVVS + L + + F+ P +
Sbjct: 58 SVAFQKLKVVDQSVLAIYFDKDGVVSRRANYTLQDGKVFDTIGRVTPTGGKELT 111
>gi|319408452|emb|CBI82107.1| small protein A [Bartonella schoenbuchensis R1]
Length = 137
Score = 146 bits (368), Expect = 9e-34, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 6/139 (4%)
Query: 22 FIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQS 81
+ S G LD +A+ VS GSS+ V+ +LG+PS ++ ++
Sbjct: 3 AFAGCSSMHSLTSSQTYKEGYVLDQNALDSVSVGSSQEQVLLALGTPSLKTKYD---NEV 59
Query: 82 FYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAP 140
FYY+SQ + + ++F+ KI++ VL I F G V+ ++ L + + F+ T P
Sbjct: 60 FYYISQTR-YRKMRFMKTKIIDRKVLAIYFNRNGQVARIANYGLQDGQIFDFITQTTPTG 118
Query: 141 IQTADGFLRRLLNPNGRSA 159
FL +++ ++
Sbjct: 119 GSDQS-FLIQVVKGPANNS 136
>gi|49475531|ref|YP_033572.1| hypothetical protein BH07600 [Bartonella henselae str. Houston-1]
gi|49238337|emb|CAF27561.1| hypothetical protein BH07600 [Bartonella henselae str. Houston-1]
Length = 159
Score = 146 bits (367), Expect = 1e-33, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 5/153 (3%)
Query: 3 KILFLNNFFFGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVI 62
+I + + L + I LV S G LD +A+ +S GSS+ VI
Sbjct: 4 RIPLIKHKLLIGLLIASIVAIGGCSLVDSSGSSQIYKEGYILDKNALDSISIGSSQEQVI 63
Query: 63 ESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSM 122
+LG+PS ++ ++ FYY+SQ + + ++F+ KI++ VL I F + V+ ++
Sbjct: 64 LALGTPSLKTKYD---NEVFYYISQTR-YRGMQFMKTKIIDRKVLAIYFNKNDQVTKIAN 119
Query: 123 ERLPNRR-FNPNPHTIPAPIQTADGFLRRLLNP 154
L + + F+ T P + ++ + P
Sbjct: 120 YGLQDGQVFDFIAQTTPTATKEQPLLIQIIKGP 152
>gi|319405756|emb|CBI79379.1| Small protein A [Bartonella sp. AR 15-3]
Length = 174
Score = 144 bits (363), Expect = 4e-33, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 6/125 (4%)
Query: 31 DYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKK 90
+ S G LD SA+ +S GSS+ V+ +LGSPS +N ++ FYY+SQ +
Sbjct: 43 SLNSSQIYKEGYILDQSALDSISVGSSQEQVLLALGSPSLKTQYN---NEVFYYISQTR- 98
Query: 91 WFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTADGFLR 149
+ ++F+ KI + VL I F + V ++ L + R F+ T P FL
Sbjct: 99 YRKMQFMKTKITDRKVLAIYFNKDRQVIKIANYGLQDGRIFDFITQTTPTGGNDQ-PFLI 157
Query: 150 RLLNP 154
+L+
Sbjct: 158 QLIKG 162
>gi|319404313|emb|CBI77906.1| small protein A [Bartonella rochalimae ATCC BAA-1498]
Length = 151
Score = 144 bits (362), Expect = 5e-33, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 6/125 (4%)
Query: 31 DYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKK 90
+ S G LD +A+ +S GSS+ V+ +LGSPS +N ++ FYY+SQ +
Sbjct: 20 SLNSSQIYKEGYILDQNALDSISIGSSQEQVLLALGSPSLKTQYN---NEVFYYISQTR- 75
Query: 91 WFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTADGFLR 149
+ ++F+ KI + VL I F + V+ ++ L + + F+ T P FL
Sbjct: 76 YRKMQFMKTKITDRKVLAIYFNKDRQVTKIANYGLQDGKIFDFITQTTPTGGNDQ-PFLI 134
Query: 150 RLLNP 154
+L+
Sbjct: 135 QLIKG 139
>gi|304391935|ref|ZP_07373877.1| SmpA/OmlA domain-containing protein [Ahrensia sp. R2A130]
gi|303296164|gb|EFL90522.1| SmpA/OmlA domain-containing protein [Ahrensia sp. R2A130]
Length = 158
Score = 143 bits (361), Expect = 7e-33, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
Query: 20 ALFIIVIGLVVDYH--VSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGN 77
L + + L + G ++ A++LV +GSSR V+ +LG+PS + +
Sbjct: 12 VLATLTVSLALTACNPSRQVYTHGYQVNDQALALVPEGSSREQVLLTLGTPSTTQT-EPD 70
Query: 78 RSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHT 136
+++FYY+SQ+K+ PV FL+ ++++ VL + + V ++ L + + F+
Sbjct: 71 GTETFYYISQRKER-PVAFLAAQVVDQRVLAVNMDQNDQVEQIANYGLKDGKVFDFIGRV 129
Query: 137 IPAPIQTADGFLRRLLNPNG 156
P + F+ +LLN G
Sbjct: 130 TPTGGKELS-FVGQLLNAAG 148
>gi|240850686|ref|YP_002972086.1| small protein A, outer membrane lipoprotein [Bartonella grahamii
as4aup]
gi|240267809|gb|ACS51397.1| small protein A, outer membrane lipoprotein [Bartonella grahamii
as4aup]
Length = 159
Score = 143 bits (360), Expect = 8e-33, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 67/130 (51%), Gaps = 6/130 (4%)
Query: 27 GLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVS 86
GL+ S G LD +A+S ++ GSS+ V+ +LG+PS ++ ++ FYY+S
Sbjct: 28 GLLDSSGSSQIYREGYILDKNALSSIAIGSSQEQVLLTLGTPSLKTKYD---NEVFYYIS 84
Query: 87 QKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTAD 145
Q + + ++F+ KI++ VL I F + V+ V+ L + + F+ T P +
Sbjct: 85 QTR-YRGMQFMKTKIIDRKVLAIYFNKNDQVAKVANYGLQDGQVFDFITQTTPT-VTKEH 142
Query: 146 GFLRRLLNPN 155
FL +++
Sbjct: 143 PFLIQIIKGP 152
>gi|319407318|emb|CBI80959.1| small protein A [Bartonella sp. 1-1C]
Length = 151
Score = 143 bits (360), Expect = 8e-33, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 6/125 (4%)
Query: 31 DYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKK 90
+ S G LD +A+ +S GSS+ V+ SLGSPS +N ++ FYY+SQ +
Sbjct: 20 SLNSSQIYKEGYILDQNALDSISIGSSQEQVLLSLGSPSLKTQYN---NEVFYYISQTR- 75
Query: 91 WFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTADGFLR 149
+ ++F+ KI + VL I F + V+ ++ L + + F+ T P FL
Sbjct: 76 YRKMQFMKTKITDRKVLAIYFNKDRQVTKIANYGLQDGKIFDFIAQTTPTGGNDQ-PFLI 134
Query: 150 RLLNP 154
+L+
Sbjct: 135 QLIKG 139
>gi|163868462|ref|YP_001609671.1| small protein A [Bartonella tribocorum CIP 105476]
gi|161018118|emb|CAK01676.1| small protein A [Bartonella tribocorum CIP 105476]
Length = 162
Score = 142 bits (357), Expect = 2e-32, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 6/151 (3%)
Query: 6 FLNNFFFGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESL 65
+ + LS + + L+ S G LD +A+S +S GSS+ V+ +L
Sbjct: 10 LIKHKLLVGLSIAGIVTLAGCSLLDSSGTSQIYREGYILDKNALSSISIGSSQEQVLLTL 69
Query: 66 GSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERL 125
G+PS ++ ++ FYY+SQ + + ++F+ KI++ VL I F VS V+ L
Sbjct: 70 GTPSLKTKYD---NEVFYYISQTR-YRGMQFMKTKIIDRKVLAIYFNGNNQVSKVANYGL 125
Query: 126 PNRR-FNPNPHTIPAPIQTADGFLRRLLNPN 155
+ + F+ T P + FL +++
Sbjct: 126 QDGQVFDFITQTTPT-LTKEHPFLIQIIKGP 155
>gi|319898988|ref|YP_004159081.1| Small protein A [Bartonella clarridgeiae 73]
gi|319402952|emb|CBI76503.1| Small protein A [Bartonella clarridgeiae 73]
Length = 175
Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 6/125 (4%)
Query: 31 DYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKK 90
+ S G LD +A+ VS GSS+ V+ +LGSPS ++ ++ FYY+SQ +
Sbjct: 44 SLNSSQIYQEGYILDKNALDSVSVGSSQEQVLLALGSPSLKTHYD---NEVFYYISQTR- 99
Query: 91 WFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTADGFLR 149
+ ++F+ KI + VL I F + V ++ L + + F+ +T P FL
Sbjct: 100 YRKMRFMKTKITDRKVLAIYFNKDRQVIKIANYGLQDGKIFDFITYTTPTGGNDQ-PFLL 158
Query: 150 RLLNP 154
+L+
Sbjct: 159 QLIKG 163
>gi|158423922|ref|YP_001525214.1| SmpA protein [Azorhizobium caulinodans ORS 571]
gi|158330811|dbj|BAF88296.1| SmpA protein [Azorhizobium caulinodans ORS 571]
Length = 212
Score = 140 bits (353), Expect = 6e-32, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 7/114 (6%)
Query: 41 GASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPK 100
G L A+ V GSSR V+ LG+PS NG+ FYY+SQ +K V FL P+
Sbjct: 95 GYVLSDGALEQVPVGSSREQVLLVLGTPSTVSTLNGD---VFYYISQTEKR--VAFLKPE 149
Query: 101 IMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTADGFLRRLLN 153
I + VL + FG+ V+ ++ L + + F+ T P + +++L++
Sbjct: 150 ITDQKVLAVYFGKDKRVTRIANYGLQDGKVFDFVSQTTPTGGEELS-IIKQLIS 202
>gi|121602304|ref|YP_988939.1| SmpA/OmlA family outer membrane protein [Bartonella bacilliformis
KC583]
gi|120614481|gb|ABM45082.1| outer membrane protein, SmpA/OmlA family [Bartonella bacilliformis
KC583]
Length = 118
Score = 137 bits (345), Expect = 4e-31, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G LD SA+ +S GSS+ V+ SLGSPS ++ ++ FYY+SQ + + ++F+
Sbjct: 7 EGYILDQSALDSISIGSSQEQVLLSLGSPSLKAKYD---NEVFYYISQIR-YRRMQFMKT 62
Query: 100 KIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTADGFLRRLLNP 154
KI++ VL I F V ++ L + R F+ T P + FL + +
Sbjct: 63 KIVDRKVLAIYFDNNNQVERIANYGLQDGRVFDFITQTTPTSSKDQS-FLMQFIRG 117
>gi|316934102|ref|YP_004109084.1| SmpA/OmlA domain-containing protein [Rhodopseudomonas palustris
DX-1]
gi|315601816|gb|ADU44351.1| SmpA/OmlA domain protein [Rhodopseudomonas palustris DX-1]
Length = 161
Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 5/127 (3%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
A+ + ++G + S G L A+ + G+S+ V+ +G+PS +G
Sbjct: 27 AVALTLVGAGMGACTSEQFQKGYILPNGALEQIPIGASQDQVLLVMGTPSTVATLDG--- 83
Query: 80 QSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIP 138
+ FYY+SQ+ + V F+ K+++ V+ I F + V ++ L + + F+ T P
Sbjct: 84 EVFYYISQRTER-AVAFMPQKVIDQRVIAIYFDKNRQVRRIANYGLQDGKIFDFISRTTP 142
Query: 139 APIQTAD 145
Q
Sbjct: 143 TSGQEMS 149
>gi|39935804|ref|NP_948080.1| SmpA/OmlA [Rhodopseudomonas palustris CGA009]
gi|39649657|emb|CAE28179.1| unknown protein [Rhodopseudomonas palustris CGA009]
Length = 161
Score = 136 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 5/127 (3%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
A+ + ++G + S G L A+ + G+S+ V+ +G+PS +G
Sbjct: 27 AIALTLVGAGMGGCTSEQFQKGYILPNGALEQIPIGASQDQVLLVMGTPSTVATLDG--- 83
Query: 80 QSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIP 138
+ FYY+SQ+ + V F+ K+++ V+ I F + V ++ L + + F+ T P
Sbjct: 84 EVFYYISQRTER-AVAFMPQKVIDQRVIAIYFDKNRQVRRIANYGLQDGKIFDFISRTTP 142
Query: 139 APIQTAD 145
Q
Sbjct: 143 TSGQEMS 149
>gi|192291392|ref|YP_001991997.1| SmpA/OmlA domain protein [Rhodopseudomonas palustris TIE-1]
gi|192285141|gb|ACF01522.1| SmpA/OmlA domain protein [Rhodopseudomonas palustris TIE-1]
Length = 161
Score = 134 bits (338), Expect = 3e-30, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 5/131 (3%)
Query: 16 SFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHN 75
SF A+ + ++G + S G L A+ + G+S+ V+ +G+PS +
Sbjct: 23 SFGLAVALTLVGAGMGGCTSEQFQKGYILPNGALEQIPIGASQDQVLLVMGTPSTVATLD 82
Query: 76 GNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNP 134
G + FYY+SQ+ + V F+ K+++ V+ I F + V ++ L + + F+
Sbjct: 83 G---EVFYYISQRTER-AVAFMPQKVIDQRVIAIYFDKNRQVRRIANYGLQDGKIFDFIS 138
Query: 135 HTIPAPIQTAD 145
T P Q
Sbjct: 139 RTTPTSGQEMS 149
>gi|75675595|ref|YP_318016.1| SmpA/OmlA [Nitrobacter winogradskyi Nb-255]
gi|74420465|gb|ABA04664.1| SmpA/OmlA [Nitrobacter winogradskyi Nb-255]
Length = 166
Score = 134 bits (336), Expect = 5e-30, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 5/130 (3%)
Query: 17 FNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNG 76
AL ++ V+ G L A+ + G+S+ V+ +G+PS NG
Sbjct: 29 LRAALAATLVCAVMAGCTGETFQKGYILPPGALEQIQIGASQDQVLIVMGTPSTVATLNG 88
Query: 77 NRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPH 135
+ FYY+SQ+ + V F+ K+++ V+ I F V+ ++ L + + F+
Sbjct: 89 ---EVFYYISQRAER-KVAFMPQKVIDQRVIAIYFDNNRQVTRLANYGLKDGKIFDFISR 144
Query: 136 TIPAPIQTAD 145
T P Q
Sbjct: 145 TTPTSGQEIS 154
>gi|49474165|ref|YP_032207.1| hypothetical protein BQ05450 [Bartonella quintana str. Toulouse]
gi|49239669|emb|CAF26040.1| hypothetical protein BQ05450 [Bartonella quintana str. Toulouse]
Length = 159
Score = 134 bits (336), Expect = 5e-30, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 6/146 (4%)
Query: 10 FFFGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPS 69
L + I + S G LD + +S GSS+ VI +LG+PS
Sbjct: 11 KLLIGLLTASMVTIAGCSFLDSSGSSQIYKEGYILDKNVFDSISIGSSQKQVILALGTPS 70
Query: 70 FSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR 129
++ ++ FYY+SQ + + ++F+ KI++ +L I F + V+ ++ L + +
Sbjct: 71 LKTKYD---NEVFYYISQTR-YRGMQFMKTKIIDRKILAIYFNKNDQVAKIANYGLQDGQ 126
Query: 130 -FNPNPHTIPAPIQTADGFLRRLLNP 154
F+ T P + FL +++
Sbjct: 127 VFDFIAQTTPTATREQS-FLIQIIKG 151
>gi|146341337|ref|YP_001206385.1| hypothetical protein BRADO4421 [Bradyrhizobium sp. ORS278]
gi|146194143|emb|CAL78164.1| conserved hypothetical protein; putative secreted protein; putative
small protein A (SmpA family) [Bradyrhizobium sp.
ORS278]
Length = 163
Score = 133 bits (334), Expect = 8e-30, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 57/130 (43%), Gaps = 5/130 (3%)
Query: 17 FNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNG 76
A I + L + G + A+ + G+S+ V+ +G+PS +G
Sbjct: 26 LRAAGAIALTCLALAACTGEQFQKGYIMPPGALEQIPIGASQDQVLIVMGTPSTVATLDG 85
Query: 77 NRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPH 135
+ FYY+SQ+ + PV F++ K+++ V+ + F + V ++ + + + F+
Sbjct: 86 ---EVFYYISQRAER-PVAFMNQKVVDQRVVAVYFDKNRQVRRLANYGMKDGKIFDFVSR 141
Query: 136 TIPAPIQTAD 145
T P Q
Sbjct: 142 TTPTSGQELS 151
>gi|85716277|ref|ZP_01047251.1| SmpA/OmlA [Nitrobacter sp. Nb-311A]
gi|85696949|gb|EAQ34833.1| SmpA/OmlA [Nitrobacter sp. Nb-311A]
Length = 166
Score = 130 bits (326), Expect = 8e-29, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 55/130 (42%), Gaps = 5/130 (3%)
Query: 17 FNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNG 76
L ++ + G L A+ + G+S+ V+ +G+PS NG
Sbjct: 29 LRATLAATLVCAAMAGCTGETFQKGYILPPGALEQIQIGASQDQVLIVMGTPSTVATLNG 88
Query: 77 NRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPH 135
+ FYY+SQ+ + V F+ K+++ V+ + F + V+ ++ L + + F+
Sbjct: 89 ---EVFYYISQRAER-KVSFMPQKVIDQRVIAVYFDKNRQVTRLANYGLKDGKIFDFISR 144
Query: 136 TIPAPIQTAD 145
T P Q
Sbjct: 145 TTPTSGQEIS 154
>gi|90424170|ref|YP_532540.1| SmpA/OmlA [Rhodopseudomonas palustris BisB18]
gi|90106184|gb|ABD88221.1| SmpA/OmlA [Rhodopseudomonas palustris BisB18]
Length = 161
Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 21 LFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQ 80
+ + ++ + + S G L A+ + G+S+ V+ +G+PS +G +
Sbjct: 28 VAVAMLCVALPGCTSEQFQKGYILPTGALEQIPIGASQDQVLIVMGTPSTVATLSG---E 84
Query: 81 SFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPA 139
FYY+SQ+ + PV F+ K+++ V+ I F + V ++ L + + F+ T P
Sbjct: 85 VFYYISQRAER-PVAFMPQKLIDQRVIAIYFDQNRQVRRIANYGLQDGKIFDFISRTTPT 143
Query: 140 PIQTAD 145
Q
Sbjct: 144 SGQEMS 149
>gi|148255984|ref|YP_001240569.1| small protein A domain-containing protein [Bradyrhizobium sp.
BTAi1]
gi|146408157|gb|ABQ36663.1| putative exported protein of unknown function with small protein A
domain (SmpA family) [Bradyrhizobium sp. BTAi1]
Length = 153
Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 22 FIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQS 81
I + L + G + A+ + G+S+ V+ +G+PS +G +
Sbjct: 21 AIALTCLALGACTGEQFQKGYIMPPGALEQIPIGASQDQVLIVMGTPSTVATLDG---EV 77
Query: 82 FYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAP 140
FYY+SQ+ + PV F++ K+++ V+ + F + V ++ + + + F+ T P
Sbjct: 78 FYYISQRAER-PVAFMNQKVVDQRVVAVYFDKNRQVRRLANYGMKDGKIFDFVSRTTPTS 136
Query: 141 IQTAD 145
Q
Sbjct: 137 GQELS 141
>gi|115524828|ref|YP_781739.1| SmpA/OmlA domain-containing protein [Rhodopseudomonas palustris
BisA53]
gi|115518775|gb|ABJ06759.1| SmpA/OmlA domain protein [Rhodopseudomonas palustris BisA53]
Length = 169
Score = 129 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 5/115 (4%)
Query: 32 YHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKW 91
S G L +A+ + G+S+ V+ +G+PS +G + FYY+SQ+ +
Sbjct: 47 ACTSEQFQKGYILPPNALEQIPMGASQDQVLLVMGTPSTVATLSG---EVFYYISQRSER 103
Query: 92 FPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTAD 145
PV F+ K+++ V+ I F + V ++ L + + F+ T P Q
Sbjct: 104 -PVGFMPQKVIDQRVIAIYFDKNRQVQRIANYGLQDGKVFDFISRTTPTSGQELS 157
>gi|298291646|ref|YP_003693585.1| SmpA/OmlA domain protein [Starkeya novella DSM 506]
gi|296928157|gb|ADH88966.1| SmpA/OmlA domain protein [Starkeya novella DSM 506]
Length = 178
Score = 129 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 8/115 (6%)
Query: 41 GASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPK 100
G + ++ + GSS+ V+ LG+PS +G + FYY+SQK K V FL P+
Sbjct: 62 GYVISPGSLDQIPIGSSQEQVLLVLGTPSTIATVDG---EVFYYISQKTK--KVMFLRPE 116
Query: 101 IMEYIVLKITFG-EKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTADGFLRRLLN 153
I++ V+ + F + V+ ++ L + + F+ + P Q + ++ N
Sbjct: 117 IIDQRVIAVYFDPKDKRVTRIADYGLKDGKIFDFVSRSTPTGGQEVS-LIGQIFN 170
>gi|86749763|ref|YP_486259.1| SmpA/OmlA [Rhodopseudomonas palustris HaA2]
gi|86572791|gb|ABD07348.1| SmpA/OmlA [Rhodopseudomonas palustris HaA2]
Length = 158
Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 5/114 (4%)
Query: 33 HVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWF 92
S G L A+ + G+S+ V+ +G+PS NG + FYY+SQ+ +
Sbjct: 37 CTSEQFQKGYILPNGALEQIPIGASQDQVLIVMGTPSTVATLNG---EVFYYISQRSER- 92
Query: 93 PVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTAD 145
PV F+ K+++ V+ I F + V ++ L + + F+ T P Q
Sbjct: 93 PVAFMPQKVVDQRVIAIYFDQNRQVRRIANYGLQDGKIFDFISRTTPTSGQEMS 146
>gi|27380135|ref|NP_771664.1| hypothetical protein blr5024 [Bradyrhizobium japonicum USDA 110]
gi|27353289|dbj|BAC50289.1| blr5024 [Bradyrhizobium japonicum USDA 110]
Length = 185
Score = 127 bits (320), Expect = 4e-28, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 5/114 (4%)
Query: 33 HVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWF 92
G L A+ + G+S+ V+ +G+PS +G + FYY+SQ+ +
Sbjct: 64 CTGEQFQKGYILPPGALEQIPIGASQDQVLIVMGTPSTVATLDG---EVFYYISQRSERM 120
Query: 93 PVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTAD 145
V F++ ++++ V+ I F + V ++ L + + F+ T P Q
Sbjct: 121 -VAFMNQRVVDQRVIAIYFDKNRRVRRLANYGLQDGKIFDFISRTTPTSGQEMS 173
>gi|299135077|ref|ZP_07028268.1| SmpA/OmlA domain protein [Afipia sp. 1NLS2]
gi|298590054|gb|EFI50258.1| SmpA/OmlA domain protein [Afipia sp. 1NLS2]
Length = 159
Score = 127 bits (318), Expect = 7e-28, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 57/130 (43%), Gaps = 5/130 (3%)
Query: 17 FNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNG 76
+ + +GLV+ G L A+ V G+S+ V+ LG+PS +G
Sbjct: 21 LRGTVAALALGLVLVGCTGEQFQRGYILPPGALEQVQIGASQDQVLVVLGTPSTVATLDG 80
Query: 77 NRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPH 135
+ FYY+SQ+ + V F+ ++++ V+ + F + V V+ L + + F+
Sbjct: 81 D---VFYYISQRTER-KVAFMHQQVIDQRVIAVYFDKNRTVRRVANYGLKDGKIFDFISR 136
Query: 136 TIPAPIQTAD 145
T P Q
Sbjct: 137 TTPTSGQEIS 146
>gi|209885005|ref|YP_002288862.1| SmpA/OmlA [Oligotropha carboxidovorans OM5]
gi|209873201|gb|ACI92997.1| SmpA/OmlA [Oligotropha carboxidovorans OM5]
Length = 158
Score = 126 bits (317), Expect = 8e-28, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 5/127 (3%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
AL + G+V+ G L A+ + G+S+ V+ LG+PS +G+
Sbjct: 23 ALTALAFGIVLAGCTGEQFQRGYILPPGALEQIQIGASQDQVLVVLGTPSTVATLDGD-- 80
Query: 80 QSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIP 138
FYY+SQ+ + V F+ ++++ V+ + F + +V V+ L + + F+ T P
Sbjct: 81 -VFYYISQRTER-KVAFMHQQVIDQRVIAVYFDKNRMVRRVANYGLKDGKIFDFISRTTP 138
Query: 139 APIQTAD 145
Q
Sbjct: 139 TSGQEIS 145
>gi|91977153|ref|YP_569812.1| SmpA/OmlA [Rhodopseudomonas palustris BisB5]
gi|91683609|gb|ABE39911.1| SmpA/OmlA [Rhodopseudomonas palustris BisB5]
Length = 158
Score = 126 bits (317), Expect = 9e-28, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 5/114 (4%)
Query: 33 HVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWF 92
S G + A+ + G+S+ V+ +G+PS NG + FYY+SQ+ +
Sbjct: 37 CTSEQFQKGYIMPNGALEQIPIGASQDQVLIVMGTPSTVATLNG---EVFYYISQRAERM 93
Query: 93 PVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTAD 145
V F+ K+++ V+ I F + V ++ + + + F+ T P Q
Sbjct: 94 -VAFMPQKVVDQRVIAIYFDQNRQVRRIANYGMQDGKIFDFISRTTPTSGQEMS 146
>gi|154248301|ref|YP_001419259.1| SmpA/OmlA domain-containing protein [Xanthobacter autotrophicus
Py2]
gi|154162386|gb|ABS69602.1| SmpA/OmlA domain protein [Xanthobacter autotrophicus Py2]
Length = 153
Score = 124 bits (310), Expect = 5e-27, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Query: 32 YHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKW 91
++ G L A+ V GSS+ V+ LG+PS NG ++F+Y+SQ +
Sbjct: 33 SGITRTYQRGYVLAEGALDQVPVGSSQEQVLLVLGTPSTVATVNG---EAFFYISQTAQ- 88
Query: 92 FPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTAD 145
V FL P+I E VL I F + VS V+ L + + F+ T P +
Sbjct: 89 -KVAFLKPEITEQKVLAIYFDKNKRVSRVAQYGLKDGKVFDFVSQTTPTSGEELS 142
>gi|92117134|ref|YP_576863.1| SmpA/OmlA [Nitrobacter hamburgensis X14]
gi|91800028|gb|ABE62403.1| SmpA/OmlA [Nitrobacter hamburgensis X14]
Length = 162
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 5/114 (4%)
Query: 33 HVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWF 92
G L A+ + G+S+ V+ +G+PS NG + FYY+SQ+ +
Sbjct: 41 CTGETFQKGYILPPGALEQIQIGASQDQVLIVMGTPSTVATLNG---EVFYYISQRSER- 96
Query: 93 PVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTAD 145
V F+ ++ + V+ I F + V ++ L + + F+ T P Q
Sbjct: 97 KVAFMHQQVTDQRVIAIYFDQNRQVIRLANYGLKDGKIFDFISRTTPTSGQEIS 150
>gi|254469516|ref|ZP_05082921.1| smAll protein a [Pseudovibrio sp. JE062]
gi|211961351|gb|EEA96546.1| smAll protein a [Pseudovibrio sp. JE062]
Length = 145
Score = 115 bits (287), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 15 LSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILH 74
+ +F+ + L + + G + AI V GSSR V LGSPS +
Sbjct: 3 AFARRTVFLACLSLPLAGCFTQTLTHGQVVSPDAIQDVQVGSSREQVELLLGSPSTTSNL 62
Query: 75 NGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPN 133
+G +++YY+SQK + V F SP I++ V+ + F + G V SV+ + + + F+
Sbjct: 63 DG---EAYYYISQKSE--TVAFWSPSIVDQRVVAVYFDKDGYVKSVADYGIEDGKVFDYL 117
Query: 134 PHTIPAPIQTADGFLRRLLNP 154
G L ++L
Sbjct: 118 GRKTRTGGADY-GLLTQILRG 137
>gi|328543544|ref|YP_004303653.1| SmpA/OmlA [polymorphum gilvum SL003B-26A1]
gi|326413288|gb|ADZ70351.1| SmpA/OmlA [Polymorphum gilvum SL003B-26A1]
Length = 145
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 7/145 (4%)
Query: 14 KLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSIL 73
K+ + + +V+GL + + G ++ + + GSSR +V LGSPS +
Sbjct: 2 KMKAHAVMVPVVLGLTLGGCFTQSYNHGHAISQDMLDQIQVGSSRENVELVLGSPSTTSN 61
Query: 74 HNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNP 132
+G+ ++YY+SQ + F+ KI+E V+ + F E+G V + L + + F+
Sbjct: 62 ISGD---AYYYISQVAQ--TTAFMGSKIVEQRVVAVYFDEEGYVRDIGHYGLQDGKVFDF 116
Query: 133 NPHTIPAPIQTADGFLRRLLNPNGR 157
T GFL ++L R
Sbjct: 117 IKRTTRTGGADY-GFLTQILRGATR 140
>gi|254505208|ref|ZP_05117359.1| SmpA / OmlA family [Labrenzia alexandrii DFL-11]
gi|222441279|gb|EEE47958.1| SmpA / OmlA family [Labrenzia alexandrii DFL-11]
Length = 145
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 7/137 (5%)
Query: 19 KALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNR 78
L ++ L + + G + + +S V GSSR V LGSPS +G+
Sbjct: 7 ALLLPLMATLPLGGCFTSTYTHGHVITSNMMSQVQVGSSREQVELVLGSPSTRSSLDGD- 65
Query: 79 SQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRF-NPNPHTI 137
++YY+SQK FL+P I+E V+ + F E G V + L + + + T
Sbjct: 66 --AYYYISQKT--ATTAFLAPDIVEQRVVAVYFDEDGFVKDMGNYTLEDGKIVDIVTRTT 121
Query: 138 PAPIQTADGFLRRLLNP 154
GFL ++L
Sbjct: 122 RTGGADY-GFLSQILKG 137
>gi|118587993|ref|ZP_01545403.1| SmpA/OmlA [Stappia aggregata IAM 12614]
gi|118439615|gb|EAV46246.1| SmpA/OmlA [Stappia aggregata IAM 12614]
Length = 145
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 60/138 (43%), Gaps = 7/138 (5%)
Query: 18 NKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGN 77
+ + +++ L + + G + ++ V GSSR V LG+PS + NG+
Sbjct: 6 SALILPLLVTLPLGGCFTSTYTHGHVITSDMLNQVQVGSSREQVELVLGTPSTTSSLNGD 65
Query: 78 RSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRF-NPNPHT 136
++YY+SQK F++P I+E V+ + F + G V + L + + +
Sbjct: 66 ---AYYYISQKT--ATTAFMAPDIVEQRVVAVYFDKDGYVQDLGNYSLEDGKIVDIVTRK 120
Query: 137 IPAPIQTADGFLRRLLNP 154
GFL ++L
Sbjct: 121 TRTGGADY-GFLTQILRG 137
>gi|182680283|ref|YP_001834429.1| SmpA/OmlA domain-containing protein [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182636166|gb|ACB96940.1| SmpA/OmlA domain protein [Beijerinckia indica subsp. indica ATCC
9039]
Length = 157
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 5/116 (4%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLS 98
+ G LD V G+S ++ LG+PS + G+ ++YY++Q +FL+
Sbjct: 40 VHGYQLDARTQQQVRIGASAEQILTLLGTPSTTSTVGGD---AWYYITQVTD-HSFQFLA 95
Query: 99 PKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTADGFLRRLLN 153
PK+++ V + F + V+ V+ + + + + T P + LLN
Sbjct: 96 PKLVDQRVFAVYFDKSKKVTRVANYGMEDGKVIDFITRTTPTGGAESTFLKGMLLN 151
>gi|46204145|ref|ZP_00209282.1| COG2913: Small protein A (tmRNA-binding) [Magnetospirillum
magnetotacticum MS-1]
Length = 165
Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 8/149 (5%)
Query: 7 LNNFFFGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLG 66
++ L+ L + IG V + G +D +A++ V G S V++ LG
Sbjct: 1 MSRRLVSSLARVAVLGSVAIG--VSGCIGEEIRHGYQIDQAALATVKPGMSAEQVLQILG 58
Query: 67 SPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLP 126
+PS ++S+YY+SQ + V FL ++ + V + F + V +++ L
Sbjct: 59 TPSTVST---VGNKSWYYISQNTRR-TVMFLGEQVEDQKVTAVYFNQGMRVERIALYGLQ 114
Query: 127 NRR-FNPNPHTIPAPIQTADGFLRRLLNP 154
+ R F+ PA FL +L
Sbjct: 115 DGRVFDFIERKTPASGADRA-FLSQLFRG 142
>gi|220926820|ref|YP_002502122.1| SmpA/OmlA domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219951427|gb|ACL61819.1| SmpA/OmlA domain protein [Methylobacterium nodulans ORS 2060]
Length = 154
Score = 106 bits (265), Expect = 8e-22, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 7/131 (5%)
Query: 26 IGLVVDYHV-SYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYY 84
+GL V V G +D +A++ V GSS V++ LG+P+ ++S+YY
Sbjct: 18 LGLSVAGCVIGEEFRRGYLIDEAAVAQVKPGSSAEQVLQLLGTPTTVST---VGNKSWYY 74
Query: 85 VSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQT 143
+SQ K V FL + VL + F + V V++ + R F+ T P
Sbjct: 75 ISQNTKR-TVMFLGESTEDQRVLAVYFNQGFKVERVALYGQQDGRVFDFISRTTPTSGGE 133
Query: 144 ADGFLRRLLNP 154
FL +LL
Sbjct: 134 QA-FLGQLLRG 143
>gi|307945257|ref|ZP_07660593.1| SmpA/OmlA [Roseibium sp. TrichSKD4]
gi|307771130|gb|EFO30355.1| SmpA/OmlA [Roseibium sp. TrichSKD4]
Length = 145
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 7/123 (5%)
Query: 33 HVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWF 92
+ G + S + V GSS+ V LGSPS + NG Q++YY+SQ +
Sbjct: 21 CFTKTYTHGHVITNSMLEQVQVGSSQEQVQLVLGSPSTTSNLNG---QAYYYISQTTE-- 75
Query: 93 PVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTADGFLRRL 151
FL+P I+E V+ + F E+G V + L + + + GFL ++
Sbjct: 76 TTAFLAPDIVEQRVVAVYFDEEGYVRDIGNYGLQDGKVVDFITRKTRTGGADY-GFLTQV 134
Query: 152 LNP 154
L
Sbjct: 135 LRG 137
>gi|163851474|ref|YP_001639517.1| SmpA/OmlA domain-containing protein [Methylobacterium extorquens
PA1]
gi|218530282|ref|YP_002421098.1| SmpA/OmlA domain protein [Methylobacterium chloromethanicum CM4]
gi|240138639|ref|YP_002963111.1| hypothetical protein MexAM1_META1p2032 [Methylobacterium extorquens
AM1]
gi|254561237|ref|YP_003068332.1| hypothetical protein METDI2815 [Methylobacterium extorquens DM4]
gi|163663079|gb|ABY30446.1| SmpA/OmlA domain protein [Methylobacterium extorquens PA1]
gi|218522585|gb|ACK83170.1| SmpA/OmlA domain protein [Methylobacterium chloromethanicum CM4]
gi|240008608|gb|ACS39834.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens AM1]
gi|254268515|emb|CAX24472.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens DM4]
Length = 165
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 6/140 (4%)
Query: 16 SFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHN 75
S +A + + + V + G +D +A++ V G V++ LG+PS
Sbjct: 8 SLARAAVLGSVAIGVSGCIGEDIRHGYQIDQAALATVKPGMGAEQVLQILGTPSTVST-- 65
Query: 76 GNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNP 134
++S+YY+SQ + V FL +I + V + F + V V++ L + R F+
Sbjct: 66 -VGNKSWYYISQNTRR-TVMFLGEQIEDQKVTAVYFNQGMKVERVALYGLQDGRVFDFIE 123
Query: 135 HTIPAPIQTADGFLRRLLNP 154
T PA F+ +L
Sbjct: 124 RTTPASGSDRA-FISQLFRG 142
>gi|170744272|ref|YP_001772927.1| SmpA/OmlA domain-containing protein [Methylobacterium sp. 4-46]
gi|168198546|gb|ACA20493.1| SmpA/OmlA domain protein [Methylobacterium sp. 4-46]
Length = 154
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 7/132 (5%)
Query: 25 VIGLVVDYHV-SYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFY 83
++GL V V G +D +A++ V G+S V++ LG+P+ ++S+Y
Sbjct: 17 LLGLSVAGCVIGEEFRHGYLIDEAAVAQVKPGTSAEQVLQLLGTPTTVST---VGNKSWY 73
Query: 84 YVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQ 142
Y+SQ K V FL + VL + F + V V++ + R F+ T P
Sbjct: 74 YISQNTKR-TVMFLGERAESQRVLAVYFNQGFKVERVALYGEQDGRVFDFISRTTPTSGG 132
Query: 143 TADGFLRRLLNP 154
FL +LL
Sbjct: 133 EQA-FLGQLLRG 143
>gi|312114070|ref|YP_004011666.1| SmpA/OmlA domain-containing protein [Rhodomicrobium vannielii ATCC
17100]
gi|311219199|gb|ADP70567.1| SmpA/OmlA domain-containing protein [Rhodomicrobium vannielii ATCC
17100]
Length = 168
Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 59/143 (41%), Gaps = 12/143 (8%)
Query: 9 NFFFGKLSFNKAL-FIIVIGLVVDYHVSYGSISGASLDM------SAISLVSQGSSRSHV 61
+F +L + + + + + +G + ++ V G S+ V
Sbjct: 8 DFGRKRLRAKALVRAVAMSSALAAACFTLPGCAGNVIKQGHQFQDEDLNQVRVGMSKDEV 67
Query: 62 IESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVS 121
+ +LG+P G ++YYVSQ + P+ F+ P++++ V+ + F +K V ++
Sbjct: 68 VLALGTPDTQSAIAGG---TYYYVSQTAQ-QPMAFMKPEVIDRRVVAVYFDKKDKVEQIA 123
Query: 122 MERLPNRR-FNPNPHTIPAPIQT 143
L + + F+ P +
Sbjct: 124 NYGLKDGKVFDFIRRETPVYTRD 146
>gi|188581264|ref|YP_001924709.1| SmpA/OmlA domain protein [Methylobacterium populi BJ001]
gi|179344762|gb|ACB80174.1| SmpA/OmlA domain protein [Methylobacterium populi BJ001]
Length = 165
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 6/140 (4%)
Query: 16 SFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHN 75
S +A + + + V + G +D +A++ V G V++ LG+PS
Sbjct: 8 SLARAAVLGSVAIGVSGCIGEEIRHGYQIDQAALATVKPGMGAEQVLQILGTPSTVST-- 65
Query: 76 GNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNP 134
++S+YY+SQ + V FL ++ + V + F V V++ L + R F+
Sbjct: 66 -VGNKSWYYISQNTRR-TVMFLGEQVEDQKVTAVYFNAGMKVERVALYGLQDGRVFDFIE 123
Query: 135 HTIPAPIQTADGFLRRLLNP 154
T PA F+ +L
Sbjct: 124 RTTPASGADRA-FISQLFRG 142
>gi|323137739|ref|ZP_08072815.1| SmpA/OmlA domain-containing protein [Methylocystis sp. ATCC 49242]
gi|322397036|gb|EFX99561.1| SmpA/OmlA domain-containing protein [Methylocystis sp. ATCC 49242]
Length = 156
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 58/136 (42%), Gaps = 6/136 (4%)
Query: 19 KALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNR 78
A + + L GA +D + V G + V+ +LG+PS + G
Sbjct: 22 AAACGVALALSGCLGYEGVINRGAVIDQRKVMQVKPGMTAPQVLTALGTPSTTSTVGG-- 79
Query: 79 SQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTI 137
+++YYVSQ+ + + F+ KI + VL + F + V+ V+ + + + + T
Sbjct: 80 -EAWYYVSQRIER-SLAFMPQKITDQHVLAVYFDKNKKVTRVADYGMEDGKPIDFLSRTT 137
Query: 138 PAPIQTADGFLRRLLN 153
P L+ LL+
Sbjct: 138 PVAGPEY-HLLQGLLS 152
>gi|170750369|ref|YP_001756629.1| SmpA/OmlA domain-containing protein [Methylobacterium radiotolerans
JCM 2831]
gi|170656891|gb|ACB25946.1| SmpA/OmlA domain protein [Methylobacterium radiotolerans JCM 2831]
Length = 165
Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 52/123 (42%), Gaps = 6/123 (4%)
Query: 33 HVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWF 92
+ G +D +A++ + G V++ LG+PS ++S+YY+SQ +
Sbjct: 25 CIGEELRHGYQVDQAALATIKPGMGPEQVLQILGTPSTVST---VGNKSWYYISQNTRRT 81
Query: 93 PVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTADGFLRRL 151
+ FL ++ + V + F V V++ L + R F+ T P FL +L
Sbjct: 82 IM-FLGEQVEDQKVTAVYFTPAFKVERVALYGLQDGRIFDFIERTTPTSGADRA-FLSQL 139
Query: 152 LNP 154
Sbjct: 140 FRG 142
>gi|217976843|ref|YP_002360990.1| SmpA/OmlA domain protein [Methylocella silvestris BL2]
gi|217502219|gb|ACK49628.1| SmpA/OmlA domain protein [Methylocella silvestris BL2]
Length = 163
Score = 95.2 bits (235), Expect = 2e-18, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 5/118 (4%)
Query: 37 GSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKF 96
+ G D + V G+S V+ L + +YYV+Q + F
Sbjct: 45 TVVHGYQSDPRTLEQVRVGASAEQVLTLL---GTPTTTSTVGGGVWYYVTQVTDR-SIAF 100
Query: 97 LSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTADGFLRRLLN 153
L PK+++ V + F + V ++ + + + F+ T P + LN
Sbjct: 101 LQPKLIDQRVFAVYFDKNKKVERIANYGIQDGKVFDFVSRTTPTAGAESTFLKGMFLN 158
>gi|154253359|ref|YP_001414183.1| SmpA/OmlA domain-containing protein [Parvibaculum lavamentivorans
DS-1]
gi|154157309|gb|ABS64526.1| SmpA/OmlA domain protein [Parvibaculum lavamentivorans DS-1]
Length = 167
Score = 94.4 bits (233), Expect = 4e-18, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 7/118 (5%)
Query: 41 GASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPK 100
G D + + + G+S+ V +GSPS +G +++YY+S K+ V F P+
Sbjct: 37 GYIFDPADLEKLQTGASKEQVRSVMGSPSTVSTVDG---EAWYYIS--SKFETVAFYRPQ 91
Query: 101 IMEYIVLKITFGEKGVVSSVSMERLPNRRF-NPNPHTIPAPIQTADGFLRRLLNPNGR 157
+E V + F E V ++ L + + + P + L +L GR
Sbjct: 92 EVERTVAAVYFDETQSVQQIAYYGLEDGQIVDFVDRKTPTRGKELT-ILGQLFGNLGR 148
>gi|296445659|ref|ZP_06887614.1| SmpA/OmlA domain protein [Methylosinus trichosporium OB3b]
gi|296256904|gb|EFH03976.1| SmpA/OmlA domain protein [Methylosinus trichosporium OB3b]
Length = 157
Score = 91.3 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 52/131 (39%), Gaps = 5/131 (3%)
Query: 14 KLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSIL 73
++ L + L GA ++ ++ V G V+ LG+PS +
Sbjct: 15 RVGGGAVLAGLAATLAGCLGYDGVINRGAVIEERKVAQVKVGMPAPQVLALLGTPSTTST 74
Query: 74 HNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNP 132
G+ ++YYVSQ+ + + F+ ++ + +L + F + V + L + + +
Sbjct: 75 VGGD---AWYYVSQRLERQ-LAFMPQEVADQHILAVYFDKSKNVQRTADYGLQDGKVVDF 130
Query: 133 NPHTIPAPIQT 143
T P+
Sbjct: 131 LTRTTPSASAD 141
>gi|300022810|ref|YP_003755421.1| SmpA/OmlA domain protein [Hyphomicrobium denitrificans ATCC 51888]
gi|299524631|gb|ADJ23100.1| SmpA/OmlA domain protein [Hyphomicrobium denitrificans ATCC 51888]
Length = 162
Score = 87.9 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 49/124 (39%), Gaps = 5/124 (4%)
Query: 35 SYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPV 94
+ G + + V G S+ V +LG+P+ + + ++FYY+S
Sbjct: 31 GTVTKHGQVFKDTDLQAVQAGMSQDQVRAALGTPATTAVI--GDGRAFYYISSTDTQQ-- 86
Query: 95 KFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTADGFLRRLLN 153
F P V+ + F + G V V+ L + + F+ P+P + L +L
Sbjct: 87 SFFLPTEQSRQVVAVYFTKGGTVDHVANYGLKDGKVFDFVSRKTPSPGGRDETILNQLFR 146
Query: 154 PNGR 157
G+
Sbjct: 147 NLGK 150
>gi|197105126|ref|YP_002130503.1| small protein A (tmRNA-binding) [Phenylobacterium zucineum HLK1]
gi|196478546|gb|ACG78074.1| small protein A (tmRNA-binding) [Phenylobacterium zucineum HLK1]
Length = 172
Score = 83.6 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 9/139 (6%)
Query: 24 IVIGLVVDYHVSYGSISGASLDMSAISLVSQGS-SRSHVIESLGSPSFSILHNGNRSQSF 82
++ G+ + + SG + V G+ ++S V LGSPS + + N +
Sbjct: 22 LIAGMGLSACAPITTYSGFQAIDANPKDVQVGTDTKSTVRAKLGSPSATSTFDPN---VW 78
Query: 83 YYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGV-VSSVSMERLPNRR-FNPNPHTIPAP 140
+YV+Q K+ V F P++ V I F ++ V+ V+ L + + N P
Sbjct: 79 FYVNQVKQR--VAFRKPQVTARNVTAIVFDKESEAVAEVNNYTLKDGKVVAFNGRETPTR 136
Query: 141 IQTADGFLRRLLNPNGRSA 159
+ L +LL GR+
Sbjct: 137 GREMT-ILEQLLGSVGRAG 154
>gi|114570076|ref|YP_756756.1| hypothetical protein Mmar10_1526 [Maricaulis maris MCS10]
gi|114340538|gb|ABI65818.1| conserved hypothetical protein [Maricaulis maris MCS10]
Length = 164
Score = 83.6 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 51/140 (36%), Gaps = 8/140 (5%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIES-LGSPSFSILHNGNR 78
+ I + G + + + S LG+PS N
Sbjct: 8 TILIAACAIGASACNPVLRSHGYRYTTQDVPEIIVAEDTESSVLSRLGNPSTRGTFEEN- 66
Query: 79 SQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNP-HTI 137
++YY+S ++ + +L P + ++ +TF E G+VS V+ L + R
Sbjct: 67 --TWYYISATRE--SLAYLRPATRDRRIIAVTFDENGLVSDVAEYGLEDGRVVAIADRET 122
Query: 138 PAPIQTADGFLRRLLNPNGR 157
P + FL +LL GR
Sbjct: 123 PTRGRELT-FLEQLLGNVGR 141
>gi|288957860|ref|YP_003448201.1| SmpA/OmlA domain protein [Azospirillum sp. B510]
gi|288910168|dbj|BAI71657.1| SmpA/OmlA domain protein [Azospirillum sp. B510]
Length = 175
Score = 82.8 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 10/158 (6%)
Query: 4 ILFLNNFFFGKLSFNKALF--IIVIGLVVDYHVSYGSISGASLDMSAI-SLVSQGSSRSH 60
I+ +NF + + L I+ GL + G D + L S R
Sbjct: 11 IMTRSNFSAPRPVIHTVLLGSILFAGLAAAGCSPIVATRGNLTDPQLVAELQPGQSRRDD 70
Query: 61 VIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV 120
V LG+P+ + N +YY+ QK + F P++ E V+ F GV+ +
Sbjct: 71 VAAVLGTPTSVGTFDPN---VWYYIGQKTE--KTAFFEPEVTERRVVVAHFDNNGVLREI 125
Query: 121 SMERLPNRR-FNPNPHTIPAPIQTADGFLRRLLNPNGR 157
N + + + P + GFL +++ GR
Sbjct: 126 KTLDKSNGQDIDLVERSTPTAGREM-GFLEQMMGNVGR 162
>gi|83858233|ref|ZP_00951755.1| hypothetical protein OA2633_02001 [Oceanicaulis alexandrii
HTCC2633]
gi|83853056|gb|EAP90908.1| hypothetical protein OA2633_02001 [Oceanicaulis alexandrii
HTCC2633]
Length = 165
Score = 81.3 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 59/140 (42%), Gaps = 7/140 (5%)
Query: 19 KALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNR 78
A +I GLV + + S D L S+S V+ +LG+PS +
Sbjct: 9 TATVLISAGLVSACNPTLRSHGFRYPDGEVPELTVGVDSQSTVLATLGNPSTRGAFEQD- 67
Query: 79 SQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTI 137
++YY+S +++ + +L P E ++ + F E GVVS+V + + R
Sbjct: 68 --TWYYISATREY--LAYLRPDTRERRIIAVRFDENGVVSAVDEYGMEDGRVVAFVDRET 123
Query: 138 PAPIQTADGFLRRLLNPNGR 157
P + L +LL GR
Sbjct: 124 PTRGRELT-ILEQLLGNVGR 142
>gi|167646999|ref|YP_001684662.1| SmpA/OmlA domain-containing protein [Caulobacter sp. K31]
gi|167349429|gb|ABZ72164.1| SmpA/OmlA domain protein [Caulobacter sp. K31]
Length = 162
Score = 79.4 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 9/141 (6%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGNR 78
A +I + V S SG + + G S+S V E LGSPS + + N
Sbjct: 8 AAAVIGLAAVAGGCTPLTSYSGFQAIEAKPVDMKVGVDSKSTVTEKLGSPSATSTFDQN- 66
Query: 79 SQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFG-EKGVVSSVSMERLPNRR-FNPNPHT 136
++YY+SQ V F P++++ V+ I F V+S+ L + + N H
Sbjct: 67 --AWYYISQTTDR--VAFYKPRVIKRDVVAIKFNPADEKVASIDTFTLKDGKVIAYNGHE 122
Query: 137 IPAPIQTADGFLRRLLNPNGR 157
P + L +LL GR
Sbjct: 123 TPTRGREMT-ILEQLLGNVGR 142
>gi|163793224|ref|ZP_02187200.1| hypothetical protein BAL199_25584 [alpha proteobacterium BAL199]
gi|159181870|gb|EDP66382.1| hypothetical protein BAL199_25584 [alpha proteobacterium BAL199]
Length = 147
Score = 79.0 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 59/146 (40%), Gaps = 9/146 (6%)
Query: 15 LSFNKALFIIVIGLVVDYHVS-YGSISGASLDMSAISLVSQGSSRSHVIESL-GSPSFSI 72
L VI ++ S + G +D A++ V G S V+ SL GSPS
Sbjct: 2 LLMRSRFAFAVITMLGFAACSPQIATHGNLVDPDALAKVEPGKSDQAVVLSLLGSPSTLG 61
Query: 73 LHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNR-RFN 131
N ++YY+ Q+ + F P+ +E V+ I F + G V S+ L + +
Sbjct: 62 NFNEP---TWYYIGQRTERQ--AFYRPETIERRVIYIDFEQGGTVKSIGSLNLEDGKKIA 116
Query: 132 PNPHTIPAPIQTADGFLRRLLNPNGR 157
P Q +++L+ GR
Sbjct: 117 FVTRETPTAGQRVT-LIKQLIGNIGR 141
>gi|255604703|ref|XP_002538269.1| conserved hypothetical protein [Ricinus communis]
gi|223512990|gb|EEF24115.1| conserved hypothetical protein [Ricinus communis]
Length = 162
Score = 78.6 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 57/141 (40%), Gaps = 8/141 (5%)
Query: 19 KALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNR 78
A+ I + +V +++ + + S+S V E LGSPS +
Sbjct: 8 AAVAIGLAAVVGGCTPLTSYSGFQAIEAKPVDMKVGEDSKSTVREKLGSPSAVSTFD--- 64
Query: 79 SQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFG-EKGVVSSVSMERLPNRR-FNPNPHT 136
+ ++YY+SQ V F P++++ V+ I F V+SV L + + N
Sbjct: 65 NDAWYYISQTTDR--VAFYKPRVIKRDVVAIKFNAADEKVTSVDTFTLKDGKVIAYNGRE 122
Query: 137 IPAPIQTADGFLRRLLNPNGR 157
P + L +LL GR
Sbjct: 123 TPTRGREMT-VLEQLLGTVGR 142
>gi|218506993|ref|ZP_03504871.1| SmpA/OmlA domain protein [Rhizobium etli Brasil 5]
Length = 86
Score = 76.7 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 95 KFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTADGFLRRLLN 153
F K+++ VL I F + GVVS + L + + F+ P + FL+++L+
Sbjct: 1 AFQKLKVVDQSVLAIYFDKDGVVSRRANYTLQDGKVFDTIGRVTPTGGKELT-FLQQMLS 59
Query: 154 PNGRSA 159
++
Sbjct: 60 GGSAAS 65
>gi|114800062|ref|YP_759878.1| SmpA/OmlA family protein [Hyphomonas neptunium ATCC 15444]
gi|114740236|gb|ABI78361.1| SmpA/OmlA family protein [Hyphomonas neptunium ATCC 15444]
Length = 159
Score = 75.5 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 8/118 (6%)
Query: 41 GASLDM-SAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G D I + +RS V+ LGSPS L + N ++Y S ++ F F P
Sbjct: 29 GYIADEVQPIDIKPGDDTRSTVLAQLGSPSTEGLFDTN---IWFYYSDIQERF--AFYRP 83
Query: 100 KIMEYIVLKITFGEKGVVSSVSMERLPNRRF-NPNPHTIPAPIQTADGFLRRLLNPNG 156
K++E ++ I+F E V V + + + + P + GF ++ G
Sbjct: 84 KVVERSIIAISFSEDDAVDEVVKYSVTDGQIVSYASRETPTRGREL-GFWEQIFGTVG 140
>gi|56697338|ref|YP_167706.1| SmpA/OmlA family lipoprotein [Ruegeria pomeroyi DSS-3]
gi|56679075|gb|AAV95741.1| lipoprotein, SmpA/OmlA family [Ruegeria pomeroyi DSS-3]
Length = 155
Score = 75.1 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 66/139 (47%), Gaps = 6/139 (4%)
Query: 19 KALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGN 77
+ + I + V+ + G ++ + G +R V+E++G+PS S L N +
Sbjct: 13 RIVAIGLTAGVLTACTAIYRNHGYVPTAEELAAIQVGVDTRDSVVEAVGTPSSSGLLNES 72
Query: 78 RSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTI 137
+YYV+ + + + + +P+++ ++ I+F ++GVV ++ L + R P +
Sbjct: 73 G---YYYVASRMRHYGAR--APQVVSRELVAISFDQRGVVRNIERYGLEDGRVIPLERRV 127
Query: 138 PAPIQTADGFLRRLLNPNG 156
+ F+R+LL G
Sbjct: 128 TSSSVEDKTFIRQLLGNLG 146
>gi|197103390|ref|YP_002128768.1| small protein A (tmRNA-binding) [Phenylobacterium zucineum HLK1]
gi|196480666|gb|ACG80193.1| small protein A (tmRNA-binding) [Phenylobacterium zucineum HLK1]
Length = 171
Score = 75.1 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 62/155 (40%), Gaps = 12/155 (7%)
Query: 11 FFGKLSFNKALFIIVIGLV---VDYHVSYGSISGAS-LDMSAISLVSQGSSRSHVIESLG 66
+ F + L I + V + + S SG +D + L ++S V LG
Sbjct: 4 VLRPIIFQRRLAIASLAAVAFAISGCTTITSHSGYQAIDTNPTDLAVGTDTKSTVRAKLG 63
Query: 67 SPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSS-VSMERL 125
SPS + + N ++Y+SQ K F P+I++ ++ + F ++ V + L
Sbjct: 64 SPSVTSTFDPN---VWFYISQIKAR--AAFRRPQIIKRDIVALGFDKETEVLKTLDTLSL 118
Query: 126 PNRR-FNPNPHTIPAPIQTADGFLRRLLNPNGRSA 159
+ + N P + L +LL GR +
Sbjct: 119 KDGKVIAFNGRETPTRGREMT-ILEQLLGSVGRGS 152
>gi|295689075|ref|YP_003592768.1| SmpA/OmlA domain-containing protein [Caulobacter segnis ATCC 21756]
gi|295430978|gb|ADG10150.1| SmpA/OmlA domain protein [Caulobacter segnis ATCC 21756]
Length = 161
Score = 75.1 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 9/130 (6%)
Query: 31 DYHVSYGSISGASLDMSAISLVSQGS-SRSHVIESLGSPSFSILHNGNRSQSFYYVSQKK 89
S SG + + + G S+S ++E LGSPS + + ++YY+SQ
Sbjct: 19 SACTPLTSYSGFQAIEAKPADMKVGEDSKSTLMEKLGSPSAVSTFD---NNTWYYISQTT 75
Query: 90 KWFPVKFLSPKIMEYIVLKITFG-EKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTADGF 147
V F P++++ V+ I F V+SVS L + + N P +
Sbjct: 76 DR--VAFYYPRVIKRDVVAIKFNPADEKVASVSTYTLKDGKVIAYNGRETPTRGREMT-I 132
Query: 148 LRRLLNPNGR 157
L +LL GR
Sbjct: 133 LEQLLGNVGR 142
>gi|16125614|ref|NP_420178.1| hypothetical protein CC_1365 [Caulobacter crescentus CB15]
gi|13422716|gb|AAK23346.1| conserved hypothetical protein [Caulobacter crescentus CB15]
Length = 161
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 9/131 (6%)
Query: 30 VDYHVSYGSISGASLDMSAISLVSQGS-SRSHVIESLGSPSFSILHNGNRSQSFYYVSQK 88
S SG + + + G S+S ++E LGSPS + + ++YY+SQ
Sbjct: 19 SSACTPLTSYSGFQAIEAKPAEMKVGEDSKSTLMEKLGSPSAVSTFD---NNTWYYISQT 75
Query: 89 KKWFPVKFLSPKIMEYIVLKITFG-EKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTADG 146
V F P++++ V+ I F V+SV L + + N P +
Sbjct: 76 TDR--VAFYMPRVIKRDVVAIKFNPADEKVASVDTYTLQDGKVIAYNGRETPTRGREMT- 132
Query: 147 FLRRLLNPNGR 157
L +LL GR
Sbjct: 133 ILEQLLGNVGR 143
>gi|221234364|ref|YP_002516800.1| SmpA/OmlA family lipoprotein [Caulobacter crescentus NA1000]
gi|220963536|gb|ACL94892.1| lipoprotein, SmpA/OmlA family [Caulobacter crescentus NA1000]
Length = 160
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 9/131 (6%)
Query: 30 VDYHVSYGSISGASLDMSAISLVSQGS-SRSHVIESLGSPSFSILHNGNRSQSFYYVSQK 88
S SG + + + G S+S ++E LGSPS + + ++YY+SQ
Sbjct: 18 SSACTPLTSYSGFQAIEAKPAEMKVGEDSKSTLMEKLGSPSAVSTFD---NNTWYYISQT 74
Query: 89 KKWFPVKFLSPKIMEYIVLKITFG-EKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTADG 146
V F P++++ V+ I F V+SV L + + N P +
Sbjct: 75 TDR--VAFYMPRVIKRDVVAIKFNPADEKVASVDTYTLQDGKVIAYNGRETPTRGREMT- 131
Query: 147 FLRRLLNPNGR 157
L +LL GR
Sbjct: 132 ILEQLLGNVGR 142
>gi|46201734|ref|ZP_00054473.2| COG2913: Small protein A (tmRNA-binding) [Magnetospirillum
magnetotacticum MS-1]
Length = 140
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 8/127 (6%)
Query: 33 HVSYGSISGASLDMSAISLVSQGSS-RSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKW 91
+ G ++ V G+S R V LG+PS +S++Y+S +
Sbjct: 12 CTPIIEVRGNLPPPEQLAQVKIGTSTREDVQALLGTPSNVTPF---GEESWHYISAITER 68
Query: 92 FPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTADGFLRR 150
F P++ E V+ + F G V ++ L + + P P + L++
Sbjct: 69 E--AFFEPEVKERKVITVVFDRAGTVRAIDNRGLEDGKDVVPAGRETPTAGKELT-ILQQ 125
Query: 151 LLNPNGR 157
L+ GR
Sbjct: 126 LMGNVGR 132
>gi|254420035|ref|ZP_05033759.1| hypothetical protein BBAL3_2345 [Brevundimonas sp. BAL3]
gi|196186212|gb|EDX81188.1| hypothetical protein BBAL3_2345 [Brevundimonas sp. BAL3]
Length = 159
Score = 71.7 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 7/139 (5%)
Query: 21 LFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQ 80
+ + + GL GS ++D +V+ ++ V+ LGSPS + + Q
Sbjct: 9 VAVSLAGLSAACAPMIGSNGFQAIDAKPQDIVAGTDTKETVLARLGSPSTTSTFEPD--Q 66
Query: 81 SFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKG-VVSSVSMERLPNR-RFNPNPHTIP 138
+YY+SQ + + + P + + ++TF G V++V L + + N P
Sbjct: 67 VWYYISQTTEKY--TYNRPVVASRTITEVTFEPNGDKVAAVRTLGLADGEQIAMNRTETP 124
Query: 139 APIQTADGFLRRLLNPNGR 157
+ L +LL GR
Sbjct: 125 TRGRALT-VLEQLLGNVGR 142
>gi|84500958|ref|ZP_00999193.1| lipoprotein, SmpA/OmlA family protein [Oceanicola batsensis
HTCC2597]
gi|84391025|gb|EAQ03443.1| lipoprotein, SmpA/OmlA family protein [Oceanicola batsensis
HTCC2597]
Length = 142
Score = 71.3 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 6/129 (4%)
Query: 25 VIGLVVDYHVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGNRSQSFY 83
+ L + V G + + ++ G +R V E LG+PS S + + + FY
Sbjct: 6 LAMLSLAACVERMRAHGYVPEEEDLQQITVGVDTRDTVAEVLGAPSTSGVTDDSGY--FY 63
Query: 84 YVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIPAPIQT 143
S + P + PK++E ++ +TF + G V ++ L + R +
Sbjct: 64 VRSTFRHLGPTQ---PKVVEREIVAVTFDDTGTVRNIERYGLEDGRAVVLSRRVTTNDSG 120
Query: 144 ADGFLRRLL 152
G L +LL
Sbjct: 121 GSGILAQLL 129
>gi|87200649|ref|YP_497906.1| SmpA/OmlA [Novosphingobium aromaticivorans DSM 12444]
gi|87136330|gb|ABD27072.1| SmpA/OmlA [Novosphingobium aromaticivorans DSM 12444]
Length = 164
Score = 70.9 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 7/128 (5%)
Query: 22 FIIVIGLVVDYHVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGNRSQ 80
++ +G++ S G +D + ++ V G ++ V +LG P+F+ Q
Sbjct: 12 AVLALGVLAAGCSSIKDHRGYIIDEALVASVQPGVDNKLSVERTLGRPTFTSQF---GKQ 68
Query: 81 SFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERL-PNRRFNPNPHTIPA 139
++YYV+ K P F PK +L + F +G VSS++ E + R +P P
Sbjct: 69 TWYYVAMNTKQKP--FNRPKTDNQSILVVDFDARGNVSSLTREGMTKVVRLSPESDKTPT 126
Query: 140 PIQTADGF 147
+ F
Sbjct: 127 LGRDRSFF 134
>gi|148554847|ref|YP_001262429.1| SmpA/OmlA domain-containing protein [Sphingomonas wittichii RW1]
gi|148500037|gb|ABQ68291.1| SmpA/OmlA domain protein [Sphingomonas wittichii RW1]
Length = 160
Score = 70.5 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 8/146 (5%)
Query: 15 LSFNKALFIIVIGLVVDYHVS-YGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSFSI 72
L + A+ + L + + G +D + I+ VS G +R V ++LG PSF+
Sbjct: 5 LLRSAAIAGTIAILGLTAGCARIRDHKGYVVDSTLINTVSPGVDNRESVEKTLGRPSFAG 64
Query: 73 LHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPN-RRFN 131
+ R ++YYV+ + V + +PK + VL + F +KG V+SV L + +
Sbjct: 65 QFDKER--TWYYVA--RDTRQVGYRTPKAVSQTVLAVHFDDKGNVASVERTGLEKVTQVS 120
Query: 132 PNPHTIPAPIQTADGFLRRLLNPNGR 157
P GF R L GR
Sbjct: 121 LYGDKTPTLGSK-RGFFRELFGNIGR 145
>gi|144899182|emb|CAM76046.1| Small protein A (tmRNA-binding) [Magnetospirillum gryphiswaldense
MSR-1]
Length = 156
Score = 70.5 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 59/148 (39%), Gaps = 10/148 (6%)
Query: 12 FGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSF 70
K+ L ++ G+ G ++ ++ G +SR V LG+PS
Sbjct: 1 MKKIFRTALLAAVIGGI--AACTPTIDNRGNLPHPEDLAKITAGKTSREEVQALLGTPSS 58
Query: 71 SILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR- 129
+ + +S+ Y+S + F P++ + V+ + F G+V +V+ + L + +
Sbjct: 59 VMPY---GDESWQYIS--AVFETTAFFKPELKDRKVVSVNFDMAGIVKTVTYKELQDGKE 113
Query: 130 FNPNPHTIPAPIQTADGFLRRLLNPNGR 157
P + G L +L+ GR
Sbjct: 114 IVLVDRETPTAGKEL-GILEQLMGNIGR 140
>gi|126726947|ref|ZP_01742786.1| hypothetical protein RB2150_03504 [Rhodobacterales bacterium
HTCC2150]
gi|126703905|gb|EBA02999.1| hypothetical protein RB2150_03504 [Rhodobacterales bacterium
HTCC2150]
Length = 146
Score = 70.5 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 60/140 (42%), Gaps = 6/140 (4%)
Query: 19 KALFIIVIGLVVDYHVSYGSISGAS-LDMSAISLVSQGSSRSHVIESLGSPSFSILHNGN 77
K++ ++ V+ + G D + ++ ++ V ++G P+ S +
Sbjct: 2 KSVAVLASVFVLSACAATYQNHGFVPSDDEMLDIIVGVDTKKSVESAVGKPTSSGVLEDG 61
Query: 78 RSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTI 137
++YYV K K + + P+ ++ VL I+FG+ G VS++ L + R +
Sbjct: 62 ---AWYYVGSKFKHY--AYKKPQEIDRQVLAISFGKSGRVSNIERFSLEDGRVVTLSRRV 116
Query: 138 PAPIQTADGFLRRLLNPNGR 157
F+R+LL GR
Sbjct: 117 TDSNIKGVSFIRQLLGSFGR 136
>gi|83952154|ref|ZP_00960886.1| lipoprotein, SmpA/OmlA family protein [Roseovarius nubinhibens ISM]
gi|83837160|gb|EAP76457.1| lipoprotein, SmpA/OmlA family protein [Roseovarius nubinhibens ISM]
Length = 151
Score = 70.5 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 63/148 (42%), Gaps = 8/148 (5%)
Query: 12 FGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSF 70
K + + ++ + G + + G +R+ V + +G PS
Sbjct: 1 MKHEFRWKTAVLGLFLMLSTACTTLYRNHGYVPPEEELQNIVVGVDTRATVDDVVGPPST 60
Query: 71 S-ILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR 129
+ +L +GN +YYV + + + L P+++E VL I+F + VV++V L + +
Sbjct: 61 AGVLSDGN----YYYVRSRVRHYGA--LRPEVIERQVLAISFDQADVVANVERFGLQDGQ 114
Query: 130 FNPNPHTIPAPIQTADGFLRRLLNPNGR 157
+ +GFLR++L GR
Sbjct: 115 VVVLSRRVTDSSVEGNGFLRQMLGNIGR 142
>gi|254488834|ref|ZP_05102039.1| lipoprotein, SmpA/OmlA family [Roseobacter sp. GAI101]
gi|214045703|gb|EEB86341.1| lipoprotein, SmpA/OmlA family [Roseobacter sp. GAI101]
Length = 154
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 59/139 (42%), Gaps = 6/139 (4%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGS-SRSHVIESLGSPSFSILHNGNR 78
A ++ GL + G + ++ G +R V +++G P+ + L
Sbjct: 13 AAALVGAGLTLGACAPQYKNHGYIPPQEDLDQITVGQDTRDTVAQTVGVPASAGLL---T 69
Query: 79 SQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIP 138
+ +YYV + + + FL+P+ +E V+ ++F +GVV +V L +
Sbjct: 70 NSGYYYV--RSRRKAIGFLAPQEVEREVVAVSFNAQGVVENVERFGLERGNVIELDRRVT 127
Query: 139 APIQTADGFLRRLLNPNGR 157
+ F+R+LL GR
Sbjct: 128 SSSVKDRSFIRQLLGNIGR 146
>gi|255263566|ref|ZP_05342908.1| lipoprotein, SmpA/OmlA family [Thalassiobium sp. R2A62]
gi|255105901|gb|EET48575.1| lipoprotein, SmpA/OmlA family [Thalassiobium sp. R2A62]
Length = 157
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Query: 30 VDYHVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGNRSQSFYYVSQK 88
+ V+ G ++ V G +R+ V E++G P+ + NG FYYVS
Sbjct: 24 LAACVAQFRNHGYVPSDEDLANVIVGVDTRASVEETVGIPTTGGVLNGAG---FYYVS-- 78
Query: 89 KKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIPAPIQTADGFL 148
+W V +P+I++ ++ ITF + GVV ++ L + + + FL
Sbjct: 79 SRWKRVGGFAPQIIDRQLVAITFDDAGVVQNIERFTLADGQVVTLSRRVTDSNVRNTTFL 138
Query: 149 RRLLN 153
R+L+
Sbjct: 139 RQLMG 143
>gi|83942548|ref|ZP_00955009.1| lipoprotein, SmpA/OmlA family protein [Sulfitobacter sp. EE-36]
gi|83953769|ref|ZP_00962490.1| lipoprotein, SmpA/OmlA family protein [Sulfitobacter sp. NAS-14.1]
gi|83841714|gb|EAP80883.1| lipoprotein, SmpA/OmlA family protein [Sulfitobacter sp. NAS-14.1]
gi|83846641|gb|EAP84517.1| lipoprotein, SmpA/OmlA family protein [Sulfitobacter sp. EE-36]
Length = 154
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 59/137 (43%), Gaps = 8/137 (5%)
Query: 23 IIVIGLVVDYHVSYGSISGASLDMSAISLVSQGS-SRSHVIESLGSPSFSILHNGNRSQS 81
++ GL + S G + ++ G +R V E++G P+ + L +
Sbjct: 16 VLAAGLTLGACSPQYSNHGYIPPQEDLEKITVGQDTRDTVAETVGVPASAGLL---TNSG 72
Query: 82 FYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAP 140
+YYV + + + F++P+ E V+ ++F GVV +V L + +P
Sbjct: 73 YYYV--RSRRQAMWFMAPRETEREVVAVSFDSNGVVQNVERFGLERGNVVTLDRRVTSSP 130
Query: 141 IQTADGFLRRLLNPNGR 157
I F+R+LL GR
Sbjct: 131 ISDKS-FIRQLLGNIGR 146
>gi|259418915|ref|ZP_05742832.1| lipoprotein, SmpA/OmlA family [Silicibacter sp. TrichCH4B]
gi|259345137|gb|EEW56991.1| lipoprotein, SmpA/OmlA family [Silicibacter sp. TrichCH4B]
Length = 155
Score = 69.0 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 6/139 (4%)
Query: 19 KALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGN 77
++ ++ +VV + G ++ V G +R V E++G P+ L + +
Sbjct: 13 RSALLVGALVVVTACTAQYRKHGWIPGPELLNEVVVGVDTRDSVSETIGEPTIDSLADDS 72
Query: 78 RSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTI 137
+YYV+ + K F K P+++ ++ ITF +GVV SV L + R P +
Sbjct: 73 G---YYYVTSRIKRFGAK--QPEVISRDLVAITFDGRGVVDSVQRYTLADGRVIPLERRV 127
Query: 138 PAPIQTADGFLRRLLNPNG 156
FLR+LL G
Sbjct: 128 TDSSLEDKTFLRQLLGNLG 146
>gi|126736410|ref|ZP_01752152.1| lipoprotein, SmpA/OmlA family [Roseobacter sp. CCS2]
gi|126714231|gb|EBA11100.1| lipoprotein, SmpA/OmlA family [Roseobacter sp. CCS2]
Length = 162
Score = 68.6 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 52/141 (36%), Gaps = 6/141 (4%)
Query: 18 NKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSS-RSHVIESLGSPSFSILHNG 76
K + ++ + + G ++ ++ GS+ ++ VI G P
Sbjct: 12 VKVMGLVSVLAIASGCTQLDRFHGFIPPEEELATLNVGSTTKAEVIALFGPP--RSERGL 69
Query: 77 NRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHT 136
+ +Y SQ +++ P P+ ++ VL I F + ++S L + R
Sbjct: 70 QNNTVYYASSQFRRFGPFA---PEEIDRQVLAIDFDGNDRIRNISRYTLEDGRVVVLDRR 126
Query: 137 IPAPIQTADGFLRRLLNPNGR 157
+ FL +LL GR
Sbjct: 127 VTEDGINDITFLAQLLGSFGR 147
>gi|94497835|ref|ZP_01304401.1| tmRNA-binding small protein A [Sphingomonas sp. SKA58]
gi|94422724|gb|EAT07759.1| tmRNA-binding small protein A [Sphingomonas sp. SKA58]
Length = 178
Score = 68.6 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 9/137 (6%)
Query: 13 GKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSFS 71
G++ L +++G + G +D + V G +R+ V +LG PSF
Sbjct: 18 GRILIVIGLGALLVGT--SACTRIRTHQGYQVDKLLVDSVQPGIDNRASVEGTLGRPSFV 75
Query: 72 ILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPN-RRF 130
Q +YYVS + + F SPK ++ VL++ F G V +V L
Sbjct: 76 SQF---GEQDWYYVS--RDMRALAFSSPKPVDQTVLRVRFDPAGNVVAVDRMGLEKVANI 130
Query: 131 NPNPHTIPAPIQTADGF 147
+P T P + F
Sbjct: 131 SPMGATTPTLGRHRSLF 147
>gi|83592997|ref|YP_426749.1| smpA/OmlA [Rhodospirillum rubrum ATCC 11170]
gi|83575911|gb|ABC22462.1| SmpA/OmlA [Rhodospirillum rubrum ATCC 11170]
Length = 155
Score = 68.2 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 50/115 (43%), Gaps = 8/115 (6%)
Query: 47 SAISLVSQG-SSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYI 105
A+ + +G +R+ + LG+PS + + G ++++Y+S + V F PK +E
Sbjct: 42 EALGQIQEGVHTRTDIQALLGTPSATSMFGG---ETWFYISNETTQ--VAFFKPKELERT 96
Query: 106 VLKITFGEKGVVSSVSMERLPNR-RFNPNPHTIPAPIQTADGFLRRLLNPNGRSA 159
++ + F + G V + + + + P + ++ L GR A
Sbjct: 97 IIAVHFDDNGRVKGIDHLSKDDGQQVDIVGRETPTRGNDSS-IVQELFGNIGRFA 150
>gi|110680338|ref|YP_683345.1| putative lipoprotein [Roseobacter denitrificans OCh 114]
gi|109456454|gb|ABG32659.1| lipoprotein, putative [Roseobacter denitrificans OCh 114]
Length = 158
Score = 68.2 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 58/147 (39%), Gaps = 8/147 (5%)
Query: 13 GKLSFNKALFIIVIGLVVDY--HVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPS 69
G A + + G++V G + + G +RS V E+LG+
Sbjct: 8 GYRFSKTARCVALAGVLVALVACGPTYRNHGYVPPQEDLDQIVVGIDTRSSVEETLGTSG 67
Query: 70 FSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR 129
+ + + + Y+V + + V L P+++E V+ ++F + G+V +V L +
Sbjct: 68 STSVLEDD---ALYFV--RSRMRTVAMLDPEVVERQVVAVSFDDNGIVENVESFGLERGQ 122
Query: 130 FNPNPHTIPAPIQTADGFLRRLLNPNG 156
+ FLR+L+ G
Sbjct: 123 IVSLTRRVTDSSVAGKSFLRQLVGNIG 149
>gi|149202715|ref|ZP_01879687.1| lipoprotein, SmpA/OmlA family [Roseovarius sp. TM1035]
gi|149143997|gb|EDM32031.1| lipoprotein, SmpA/OmlA family [Roseovarius sp. TM1035]
Length = 135
Score = 68.2 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 61/131 (46%), Gaps = 8/131 (6%)
Query: 28 LVVDYHVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSFSILH-NGNRSQSFYYV 85
+VV + G + + G SR+ V + +G PS S + +G+ +YYV
Sbjct: 1 MVVTGCAATYRNHGYVPPEEDLQNLVVGVDSRATVDDVIGPPSLSGVLADGD----YYYV 56
Query: 86 SQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIPAPIQTAD 145
+ + + + P+++E VL I+F + ++++ L + + P + ++
Sbjct: 57 RSRVREYGM--FRPQVVERRVLAISFNDNDTIANIEEFGLEDGQVVPLARRVTDSSVVSN 114
Query: 146 GFLRRLLNPNG 156
GFLR+LL+ G
Sbjct: 115 GFLRQLLSNIG 125
>gi|126739440|ref|ZP_01755133.1| lipoprotein, SmpA/OmlA family [Roseobacter sp. SK209-2-6]
gi|126719540|gb|EBA16249.1| lipoprotein, SmpA/OmlA family [Roseobacter sp. SK209-2-6]
Length = 173
Score = 68.2 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 57/146 (39%), Gaps = 7/146 (4%)
Query: 13 GKLSFNKALFIIVIGLVVDYHVSYGSI-SGASLDMSAISLVSQG-SSRSHVIESLGSPSF 70
G+ L I V+ S G ++ V G ++ V E+LG PS
Sbjct: 23 GQFKSAAKLAIWVVTAAALASCSARYQRHGYVPTEEELAEVVVGIDTKDSVAETLGVPSA 82
Query: 71 SILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRF 130
S + + + +YYV+ + V + P + ++ I F + VVS V L + +
Sbjct: 83 SGVLSESG---YYYVATTMRHRGVSAIKP--VSRELVAINFDARDVVSGVERYSLEDGKV 137
Query: 131 NPNPHTIPAPIQTADGFLRRLLNPNG 156
P + + FLR+LL G
Sbjct: 138 IPLERRVTSSSVQDKTFLRQLLGSLG 163
>gi|89054279|ref|YP_509730.1| SmpA/OmlA [Jannaschia sp. CCS1]
gi|88863828|gb|ABD54705.1| SmpA/OmlA [Jannaschia sp. CCS1]
Length = 154
Score = 67.8 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 56/128 (43%), Gaps = 5/128 (3%)
Query: 30 VDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKK 89
+ + + G +S +S G+SR V E GSP + R ++++Y +Q +
Sbjct: 23 LAACSATYTNHGYVPPPELLSEISIGTSREQVAEIAGSPGTGGVM---RDEAWFY-TQYR 78
Query: 90 KWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIPAPIQTADGFLR 149
+ +P ++E ++ I+F + G V+++ L + + + GF R
Sbjct: 79 VRN-FTYNAPDVIERDIVAISFSDAGRVTNIERFGLEDGQIVQLSRRVTESSVRDLGFFR 137
Query: 150 RLLNPNGR 157
+L+ GR
Sbjct: 138 SILSNFGR 145
>gi|254465174|ref|ZP_05078585.1| lipoprotein, SmpA/OmlA family [Rhodobacterales bacterium Y4I]
gi|206686082|gb|EDZ46564.1| lipoprotein, SmpA/OmlA family [Rhodobacterales bacterium Y4I]
Length = 157
Score = 67.8 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Query: 41 GASLDMSAI-SLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G S + +V +R V E++G PS + + N + +YYV+ + + + +P
Sbjct: 35 GYVPTPSQLAEVVPGVDTRDSVAETIGVPSSTGVLNESG---YYYVATRFRHYGAS--AP 89
Query: 100 KIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIPAPIQTADGFLRRLLNPNG 156
K + ++ I+F +GVV + L + R P + + FLR+LL G
Sbjct: 90 KPVARDLVAISFDAQGVVEGIRRYSLEDGRVVPLERRVTSSGVEDSTFLRQLLGNLG 146
>gi|209964634|ref|YP_002297549.1| SmpA [Rhodospirillum centenum SW]
gi|209958100|gb|ACI98736.1| SmpA [Rhodospirillum centenum SW]
Length = 155
Score = 67.8 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 8/123 (6%)
Query: 33 HVSYGSISGASLDMSAISLVSQGS-SRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKW 91
+ G D +S + GS SR V LG P+ + + N +YY+ ++ +
Sbjct: 19 CSPIVATRGNLTDTQRLSEIQPGSTSRDQVQYLLGYPTATGTVDPN---VWYYIGRRTEQ 75
Query: 92 FPVKFLSPKIMEYIVLKITFGEKGVVSSV-SMERLPNRRFNPNPHTIPAPIQTADGFLRR 150
F P ++E +++I F G V+++ ++ R +P+ T P FL +
Sbjct: 76 --TAFFQPDVVEQRIVRIRFDGNGTVAALDEIDGNAARAIDPSEATTPTVGHDMS-FLEQ 132
Query: 151 LLN 153
L+
Sbjct: 133 LVG 135
>gi|310815857|ref|YP_003963821.1| lipoprotein, SmpA/OmlA family [Ketogulonicigenium vulgare Y25]
gi|308754592|gb|ADO42521.1| lipoprotein, SmpA/OmlA family [Ketogulonicigenium vulgare Y25]
Length = 165
Score = 67.8 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 61/144 (42%), Gaps = 8/144 (5%)
Query: 17 FNKALFIIVIGLVVDYHVSYGSIS---GASLDMSAISLVSQGSSRSHVIESLGSPSFSIL 73
+ L +++ V+ V+ + G I+ ++ G SR+ VI ++G P+ +
Sbjct: 16 LQRGLRLVLASSVIALVVACTPVQRNHGYIPTEDMIAGLNVGDSRASVISAIGEPAAQSV 75
Query: 74 HNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPN 133
+FYYV + + F +P+ ++ VL +TF G + +++ L +
Sbjct: 76 ---QGQGAFYYVQSRFETFGA--FAPREIDRQVLAVTFTPAGTLQNIARYGLQDGNVVIL 130
Query: 134 PHTIPAPIQTADGFLRRLLNPNGR 157
+ F+R+LL GR
Sbjct: 131 SRRVTDEQVGDMTFIRQLLGNFGR 154
>gi|254293747|ref|YP_003059770.1| SmpA/OmlA domain protein [Hirschia baltica ATCC 49814]
gi|254042278|gb|ACT59073.1| SmpA/OmlA domain protein [Hirschia baltica ATCC 49814]
Length = 155
Score = 67.4 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 8/134 (5%)
Query: 25 VIGLVVDYHVSYGSISGASLDM-SAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFY 83
V L ++ + + G D + +RS VI LGSPS + + + N +
Sbjct: 11 VAVLALNACQASRNFHGYLPDQVRPAEIEPSVDTRSTVIARLGSPSTTSIFDDN---LWV 67
Query: 84 YVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQ 142
Y+S ++ + + PK+++ ++ I F + V V L + P +
Sbjct: 68 YMSATREQ--LTYHRPKVVKRNIVAIQFDDSDQVVDVLTYDLEAGEVIDYVSRETPTRGR 125
Query: 143 TADGFLRRLLNPNG 156
G L +L G
Sbjct: 126 QL-GILEQLFGTIG 138
>gi|126729750|ref|ZP_01745563.1| lipoprotein, SmpA/OmlA family [Sagittula stellata E-37]
gi|126709869|gb|EBA08922.1| lipoprotein, SmpA/OmlA family [Sagittula stellata E-37]
Length = 152
Score = 67.4 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 56/137 (40%), Gaps = 7/137 (5%)
Query: 22 FIIVIGLVVDYHVSYGSIS-GASLDMSAIS-LVSQGSSRSHVIESLGSPSFSILHNGNRS 79
++ I LV + G + +V +R+ V + +G P+ S + N +
Sbjct: 11 AVLAIALVGVAGCETRYRNHGYVPSEEVLQQIVPGVDTRATVEDVVGVPNASGVLNDSG- 69
Query: 80 QSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIPA 139
FYY+ + K F + P + E ++ ITF + GVV ++ L + R P +
Sbjct: 70 --FYYIQSEVKHF--AWQRPTVTEREIVAITFDQAGVVDNIVTYGLEDGRVVPLTKRVTQ 125
Query: 140 PIQTADGFLRRLLNPNG 156
F+R+L G
Sbjct: 126 TSDGDISFIRKLFGNIG 142
>gi|260753469|ref|YP_003226362.1| SmpA/OmlA domain protein [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|258552832|gb|ACV75778.1| SmpA/OmlA domain protein [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 164
Score = 67.4 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 7/138 (5%)
Query: 17 FNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHN 75
+ +++ GL V G +D + + VS G +R V ++LG P+ + +
Sbjct: 10 GKAGILLMLAGLSVG-CTRIRDHRGYMVDKAMVQSVSPGVDNRQSVEKTLGRPTLAGEFD 68
Query: 76 GNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPH 135
N +YY+S K + F PK + VL + F +G VS V L +
Sbjct: 69 PN---VWYYISTDTKQ--LVFSLPKAYKQNVLAVHFDPRGNVSRVETMGLEHVSHIHPIR 123
Query: 136 TIPAPIQTADGFLRRLLN 153
+ T GF L N
Sbjct: 124 DQTVTLSTHRGFFAELFN 141
>gi|260426346|ref|ZP_05780325.1| lipoprotein, SmpA/OmlA family [Citreicella sp. SE45]
gi|260420838|gb|EEX14089.1| lipoprotein, SmpA/OmlA family [Citreicella sp. SE45]
Length = 150
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 54/125 (43%), Gaps = 6/125 (4%)
Query: 33 HVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKW 91
+ + G + + + G +RS V + +G PS S + N + FYY+ + +
Sbjct: 21 CSAQYDLHGYAPSEEDLQQIVPGIDTRSTVEDVIGVPSASGVLNESG---FYYI--ETQM 75
Query: 92 FPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIPAPIQTADGFLRRL 151
+ +P++++ +L ITF GVV +++ L + P I F+RRL
Sbjct: 76 RSFAWRAPEVVDREILAITFDNAGVVDNITRYGLEDGNVVPLTRRITRTSDGELSFIRRL 135
Query: 152 LNPNG 156
G
Sbjct: 136 FGNIG 140
>gi|99080759|ref|YP_612913.1| SmpA/OmlA family lipoprotein [Ruegeria sp. TM1040]
gi|99037039|gb|ABF63651.1| lipoprotein SmpA/OmlA family [Ruegeria sp. TM1040]
Length = 155
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 6/139 (4%)
Query: 19 KALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGN 77
++ ++ + + V + G ++ V G +R V E++G P+ L + +
Sbjct: 13 RSALLVGVLVAVTACTAQYRKHGWVPGPDLLNEVVVGVDTRDSVSETIGEPTIDSLVDDS 72
Query: 78 RSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTI 137
+YYVS + K F K P+++ ++ ITF +GVV SV L + R P +
Sbjct: 73 G---YYYVSSRIKRFGPK--EPEVVSRDLVAITFDGRGVVDSVQRYTLADGRAVPLERRV 127
Query: 138 PAPIQTADGFLRRLLNPNG 156
FLR+L+ G
Sbjct: 128 TDSNLEDKTFLRQLIGNLG 146
>gi|163746482|ref|ZP_02153840.1| lipoprotein, putative [Oceanibulbus indolifex HEL-45]
gi|161380367|gb|EDQ04778.1| lipoprotein, putative [Oceanibulbus indolifex HEL-45]
Length = 154
Score = 67.1 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 41 GASLDMSAISLVSQGS-SRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G + V GS ++ V + +G P+ S + + + S+YYV +K+ + FL+P
Sbjct: 34 GYVPPEDQLEQVVVGSDTKESVAQKIGVPTASGVLSDD---SYYYVKMRKR--ALGFLAP 88
Query: 100 KIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIPAPIQTADGFLRRLLNPNGR 157
K +E V+ ++F E GVVS+V L + P + + FLR+LL GR
Sbjct: 89 KEVEREVVTVSFNEAGVVSNVERFGLERGQVVPLSRRVTTSPVADNTFLRQLLGNLGR 146
>gi|302383004|ref|YP_003818827.1| SmpA/OmlA domain protein [Brevundimonas subvibrioides ATCC 15264]
gi|302193632|gb|ADL01204.1| SmpA/OmlA domain protein [Brevundimonas subvibrioides ATCC 15264]
Length = 159
Score = 66.7 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 47/123 (38%), Gaps = 8/123 (6%)
Query: 37 GSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKF 96
G +D+ + ++ V+ LGSPS N +YY+SQ + + +
Sbjct: 26 GLQGFQVVDVKPADIKVGEDTKETVVAQLGSPSAVSTFEDN---IWYYISQTTERY--TY 80
Query: 97 LSPKIMEYIVLKITFGE-KGVVSSVSMERLPNR-RFNPNPHTIPAPIQTADGFLRRLLNP 154
P++ + V ITF E V+ V L + + P + L +LL
Sbjct: 81 NVPQVSQRTVTAITFNETDDKVAEVRNLGLEDGQQIAMERRETPTRGRQLT-VLEQLLGN 139
Query: 155 NGR 157
GR
Sbjct: 140 VGR 142
>gi|329889485|ref|ZP_08267828.1| smpA / OmlA family protein [Brevundimonas diminuta ATCC 11568]
gi|328844786|gb|EGF94350.1| smpA / OmlA family protein [Brevundimonas diminuta ATCC 11568]
Length = 159
Score = 65.5 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 7/103 (6%)
Query: 57 SRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKG- 115
+R V+ LG+PS + + +YY++Q + + + P++ + V +ITF + G
Sbjct: 45 TRETVLAKLGTPSTTSTFETDN--VWYYLTQTTQRY--TYNKPEVSQRTVTEITFADGGE 100
Query: 116 VVSSVSMERLPNRR-FNPNPHTIPAPIQTADGFLRRLLNPNGR 157
V++V L + R P + L +LL GR
Sbjct: 101 KVANVRTLGLEDGRQIAMERRETPTRGRQLT-ILEQLLGNVGR 142
>gi|114762839|ref|ZP_01442271.1| lipoprotein, SmpA/OmlA family [Pelagibaca bermudensis HTCC2601]
gi|114544449|gb|EAU47456.1| lipoprotein, SmpA/OmlA family [Roseovarius sp. HTCC2601]
Length = 139
Score = 65.5 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 53/134 (39%), Gaps = 6/134 (4%)
Query: 24 IVIGLVVDYHVSYGSISGASLDMSAI-SLVSQGSSRSHVIESLGSPSFSILHNGNRSQSF 82
+V L + + G + +V +R V + +G PS S + N F
Sbjct: 1 MVAVLGLSACSAQYRTHGYVPSEEDLQEIVPGIDTRGTVEDVIGVPSASGVANDGG---F 57
Query: 83 YYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIPAPIQ 142
YY+ + + F + +P+ + VL ++F GVV +++ L + P +
Sbjct: 58 YYIESEMRHF--AWQAPEEINREVLAVSFDSDGVVDNITRYGLEDGNVVPLTRRVTKTTD 115
Query: 143 TADGFLRRLLNPNG 156
F+R+L G
Sbjct: 116 GELSFIRKLFGNIG 129
>gi|254476814|ref|ZP_05090200.1| lipoprotein, SmpA/OmlA family [Ruegeria sp. R11]
gi|214031057|gb|EEB71892.1| lipoprotein, SmpA/OmlA family [Ruegeria sp. R11]
Length = 156
Score = 65.5 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 54/139 (38%), Gaps = 6/139 (4%)
Query: 19 KALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGN 77
K +V G V G ++ V G ++ V E++G P+ + +
Sbjct: 14 KVTVFLVAGFAVTACAPMYRKHGYVPTEEQLAEVVVGVDTKDTVAETIGVPAAEGVLSDG 73
Query: 78 RSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTI 137
+YYVS + L P + ++ +TF ++GVVS + L + P +
Sbjct: 74 G---YYYVSTLMRRRGPSALKP--VSRELVAVTFNQQGVVSGIERYGLEQGKVIPLQRRV 128
Query: 138 PAPIQTADGFLRRLLNPNG 156
+ FLR+LL G
Sbjct: 129 TSSNIQDKTFLRQLLGSLG 147
>gi|85703257|ref|ZP_01034361.1| hypothetical protein ROS217_20987 [Roseovarius sp. 217]
gi|85672185|gb|EAQ27042.1| hypothetical protein ROS217_20987 [Roseovarius sp. 217]
Length = 151
Score = 64.7 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 62/138 (44%), Gaps = 9/138 (6%)
Query: 22 FIIVIGLVVDYHVSYGSIS-GASLDMSAISLVSQG-SSRSHVIESLGSPSFSILH-NGNR 78
+ + L+V S + G + + G +R+ V + +G PS S + +G+
Sbjct: 11 ALALCCLIVATGCSATYRNHGYVPPEEDLQNLVVGVDTRATVDDVVGPPSLSGVLADGD- 69
Query: 79 SQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIP 138
+YYV + + + + PK++E VL I+F + ++++ L + P +
Sbjct: 70 ---YYYVRSRVREYGM--FRPKVVERRVLAISFNDDDTIANIEEFGLEAGQVVPLARRVT 124
Query: 139 APIQTADGFLRRLLNPNG 156
+GFLR++L+ G
Sbjct: 125 DSSVIKNGFLRQILSNIG 142
>gi|149187077|ref|ZP_01865383.1| tmRNA-binding small protein A [Erythrobacter sp. SD-21]
gi|148829288|gb|EDL47733.1| tmRNA-binding small protein A [Erythrobacter sp. SD-21]
Length = 147
Score = 64.7 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 8/138 (5%)
Query: 21 LFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGNRS 79
+ ++ GL + S G +D ++ V G ++ V +LG P+F+
Sbjct: 1 MALVGAGLSLGACSSIRETRGYVVDSVLLNTVQPGIDNQRSVEMTLGRPTFTSQF---GE 57
Query: 80 QSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRF-NPNPHTIP 138
++YYVS P F+ P I E+ VL + FG G V S + + P+ P
Sbjct: 58 PTWYYVSSTTGRKP--FVRPSIREHQVLAVKFGPDGNVISADRSGVDQVVYLTPDGDKTP 115
Query: 139 APIQTADGFLRRLLNPNG 156
+ GFL L G
Sbjct: 116 TLGRE-RGFLEDLFGNIG 132
>gi|149914947|ref|ZP_01903476.1| lipoprotein, SmpA/OmlA family [Roseobacter sp. AzwK-3b]
gi|149811135|gb|EDM70972.1| lipoprotein, SmpA/OmlA family [Roseobacter sp. AzwK-3b]
Length = 151
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 58/136 (42%), Gaps = 7/136 (5%)
Query: 23 IIVIGLVVDYHVSYGSIS-GASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGNRSQ 80
++ +G++ S + G + + G +R+ V + +G PS S +
Sbjct: 12 MLALGVLALSACSATYQNHGYIPPEEDLQQLVVGVDTRATVDDVIGPPSTSGVLEQGD-- 69
Query: 81 SFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIPAP 140
+YYV + + + + P+++E VL I+F ++++ L + P +
Sbjct: 70 -YYYVRSRIREYGMY--RPEVVERQVLAISFDSTDTIANIERFGLEDGVVVPLSRRVTES 126
Query: 141 IQTADGFLRRLLNPNG 156
+ FLR+LL+ G
Sbjct: 127 SVVDNNFLRQLLSNIG 142
>gi|254510740|ref|ZP_05122807.1| lipoprotein, SmpA/OmlA family [Rhodobacteraceae bacterium KLH11]
gi|221534451|gb|EEE37439.1| lipoprotein, SmpA/OmlA family [Rhodobacteraceae bacterium KLH11]
Length = 157
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 57/140 (40%), Gaps = 6/140 (4%)
Query: 18 NKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNG 76
+K L V G ++ + G +R V E++G+PS S L
Sbjct: 11 SKTLVFAACLAVAGACSPIVKNHGYVPPPEDLAKIKVGVDTRESVEETIGAPSSSGL--- 67
Query: 77 NRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHT 136
R +YYV+ + + + P+++ ++ I+F ++GVV ++ L +
Sbjct: 68 VRDSGYYYVASRIRTSGPR--RPEVVARELVAISFDQRGVVRNIERFGLEDGYVIVLDRR 125
Query: 137 IPAPIQTADGFLRRLLNPNG 156
+ GFLR+LL G
Sbjct: 126 VTDSNVEDKGFLRQLLGNIG 145
>gi|163735828|ref|ZP_02143257.1| lipoprotein, putative [Roseobacter litoralis Och 149]
gi|161390914|gb|EDQ15254.1| lipoprotein, putative [Roseobacter litoralis Och 149]
Length = 156
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 57/147 (38%), Gaps = 8/147 (5%)
Query: 13 GKLSFNKALFIIVIGLV--VDYHVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPS 69
G A ++ G++ + G + + G +RS V E+LG+
Sbjct: 6 GYRFSKTARTFVLAGVLFGLVACGPTYRNHGYVPPQEDLDQIVVGIDTRSSVEETLGTSG 65
Query: 70 FSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR 129
+ + + + Y+V + + V L P+++E V+ ++F G+V +V L +
Sbjct: 66 STSVLEDD---ALYFV--RSRMRTVAMLDPEVIERQVVAVSFDANGIVENVESFGLERGQ 120
Query: 130 FNPNPHTIPAPIQTADGFLRRLLNPNG 156
+ FLR+L+ G
Sbjct: 121 IVSLTRRVTDSSVAGKSFLRQLVGNIG 147
>gi|163739616|ref|ZP_02147025.1| lipoprotein, SmpA/OmlA family [Phaeobacter gallaeciensis BS107]
gi|161387075|gb|EDQ11435.1| lipoprotein, SmpA/OmlA family [Phaeobacter gallaeciensis BS107]
Length = 155
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 6/137 (4%)
Query: 21 LFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGNRS 79
+ ++++ + + G +S V G ++ V E++G P+ +
Sbjct: 15 VTVLLVAGLAVSGCAMYRKHGYVPSEELLSEVVVGVDTKDSVAETVGVPAAEGVLTDGG- 73
Query: 80 QSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIPA 139
+YYVS + P + ++ I F ++GVV+ + L R P + +
Sbjct: 74 --YYYVSTLMRRRGPSATKP--VSRELVAINFNDQGVVTGIERYGLEQGRVIPLQRRVTS 129
Query: 140 PIQTADGFLRRLLNPNG 156
FLR+LL G
Sbjct: 130 SNVQDKTFLRQLLGSLG 146
>gi|85710344|ref|ZP_01041409.1| tmRNA-binding small protein A [Erythrobacter sp. NAP1]
gi|85689054|gb|EAQ29058.1| tmRNA-binding small protein A [Erythrobacter sp. NAP1]
Length = 161
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 10/143 (6%)
Query: 13 GKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSFS 71
G++ AL V+ L S G D ++ V G +R V LG P+F
Sbjct: 9 GRMFKIAALGCAVLAL--GACSSIRESRGFVNDAVLVNSVQPGIDNRRSVEGMLGRPTFE 66
Query: 72 ILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRF- 130
+ N ++YY+S P F+ P+I ++ V+ I F E+G V+++ + +
Sbjct: 67 SQYGEN---TWYYISSITGRRP--FVRPRIRDHSVMAIRFDEEGNVATIERSGIDEVVYL 121
Query: 131 NPNPHTIPAPIQTADGFLRRLLN 153
P+ P + GFL L
Sbjct: 122 TPDGDKTPTLGRE-RGFLEDLFG 143
>gi|86138663|ref|ZP_01057236.1| lipoprotein, SmpA/OmlA family protein [Roseobacter sp. MED193]
gi|85824723|gb|EAQ44925.1| lipoprotein, SmpA/OmlA family protein [Roseobacter sp. MED193]
Length = 160
Score = 64.0 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 6/117 (5%)
Query: 41 GASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G ++ V G ++ V E++G+PS S + N +YYVS + P
Sbjct: 39 GYVPTEEQLAEVVVGVDTKDSVAETVGTPSASGVLNDGG---YYYVSTLMRTRGAGATKP 95
Query: 100 KIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIPAPIQTADGFLRRLLNPNG 156
+ ++ +TF + VVS + L + + P + + F+R+LL G
Sbjct: 96 --VSRTLVAVTFDSRDVVSGIERYSLEDGKVIPLQRRVTSSSVEDKTFIRQLLGSLG 150
>gi|296283398|ref|ZP_06861396.1| tmRNA-binding small protein A [Citromicrobium bathyomarinum JL354]
Length = 149
Score = 64.0 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 47/127 (37%), Gaps = 7/127 (5%)
Query: 23 IIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSH-VIESLGSPSFSILHNGNRSQS 81
+I + + S G D L+ G V +LG P+F+ ++
Sbjct: 2 LIGLAVTAGGCTSIREARGYIEDERMTGLIQPGIDNEQSVQSTLGRPTFTSQFGP---ET 58
Query: 82 FYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRF-NPNPHTIPAP 140
+YYVS P F+ PKI + VL + F G V + + + +P+ P
Sbjct: 59 WYYVSSVTGRKP--FVRPKIQTHSVLAVRFDSDGKVVAADRSGIDQVVYLSPDGDETPTL 116
Query: 141 IQTADGF 147
+ F
Sbjct: 117 GRERTFF 123
>gi|84687529|ref|ZP_01015405.1| hypothetical protein 1099457000249_RB2654_04864 [Maritimibacter
alkaliphilus HTCC2654]
gi|84664438|gb|EAQ10926.1| hypothetical protein RB2654_04864 [Rhodobacterales bacterium
HTCC2654]
Length = 170
Score = 63.6 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 57/146 (39%), Gaps = 9/146 (6%)
Query: 13 GKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSFS 71
G L AL I V V S G + + G +R V +G P +
Sbjct: 24 GILRLMAALAITVA---VSACTPIYSNHGYLPTDQDVEEIMVGLDTRETVAAIVGKPGAA 80
Query: 72 ILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFN 131
L +++YYV + ++ V + + ++ VL+ITF E GVV ++ L
Sbjct: 81 GLL---TEEAWYYV--QSRFEQVGYREKEEIDREVLRITFTEAGVVENIERFGLEEGNVV 135
Query: 132 PNPHTIPAPIQTADGFLRRLLNPNGR 157
+ GFLR+LL G+
Sbjct: 136 VLSRRVTTSNTRGIGFLRQLLGNIGK 161
>gi|241762457|ref|ZP_04760534.1| SmpA/OmlA domain protein [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|283856577|ref|YP_163643.2| SmpA/OmlA domain-containing protein [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241372959|gb|EER62626.1| SmpA/OmlA domain protein [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|283775586|gb|AAV90532.2| SmpA/OmlA domain protein [Zymomonas mobilis subsp. mobilis ZM4]
Length = 148
Score = 63.6 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 6/130 (4%)
Query: 25 VIGLVVDYHVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGNRSQSFY 83
++ + G +D + + VS G +R V ++LG P+ + + N +Y
Sbjct: 1 MLAGLSVGCTRIRDHRGYMVDKAMVQSVSPGVDNRQSVEKTLGRPTLAGEFDPN---VWY 57
Query: 84 YVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIPAPIQT 143
Y+S K + F PK + VL + F +G VS V L + + T
Sbjct: 58 YISTDTKQ--LVFSLPKAYKQNVLAVHFDPRGNVSRVETMGLEHVSHIHPIRDQTVTLST 115
Query: 144 ADGFLRRLLN 153
GF L N
Sbjct: 116 HRGFFAELFN 125
>gi|126462042|ref|YP_001043156.1| SmpA/OmlA domain-containing protein [Rhodobacter sphaeroides ATCC
17029]
gi|126103706|gb|ABN76384.1| SmpA/OmlA domain protein [Rhodobacter sphaeroides ATCC 17029]
Length = 165
Score = 63.2 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 7/138 (5%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGNR 78
AL + + +V Y + G + + G +R V E +G PS S L N +
Sbjct: 20 ALGLSLAVVVAACQPIYRNH-GYVPTEIDLQRIEVGRDTRDSVAEIVGRPSASTLLNDSG 78
Query: 79 SQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIP 138
+YYV + + + + P+ ++ V+ ITF G V ++ L + P +
Sbjct: 79 ---WYYVQSRYRHYGAR--EPQEVDRQVVAITFNPSGTVRNIERFGLEKGQIVPLSRRVT 133
Query: 139 APIQTADGFLRRLLNPNG 156
GFLR+L G
Sbjct: 134 DTTIEGTGFLRQLFGNIG 151
>gi|332558044|ref|ZP_08412366.1| SmpA/OmlA domain-containing protein [Rhodobacter sphaeroides WS8N]
gi|332275756|gb|EGJ21071.1| SmpA/OmlA domain-containing protein [Rhodobacter sphaeroides WS8N]
Length = 147
Score = 63.2 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 7/138 (5%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGNR 78
AL + + +V Y + G + + G +R V E +G PS S L N +
Sbjct: 2 ALGLSLAVVVAACQPIYRNH-GYVPTEIDLQRIEVGRDTRDSVAEIVGRPSASTLLNDSG 60
Query: 79 SQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIP 138
+YYV + + + + P+ ++ V+ ITF G V ++ L + P +
Sbjct: 61 ---WYYVQSRYRHYGAR--EPQEVDRQVVAITFNPSGTVRNIERFGLEKGQIVPLSRRVT 115
Query: 139 APIQTADGFLRRLLNPNG 156
GFLR+L G
Sbjct: 116 DTTIEGTGFLRQLFGNIG 133
>gi|326385662|ref|ZP_08207292.1| SmpA/OmlA [Novosphingobium nitrogenifigens DSM 19370]
gi|326209820|gb|EGD60607.1| SmpA/OmlA [Novosphingobium nitrogenifigens DSM 19370]
Length = 170
Score = 63.2 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 47/128 (36%), Gaps = 7/128 (5%)
Query: 22 FIIVIGLVVDYHVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGNRSQ 80
++ + + S G +D + V G +R V SLG P+
Sbjct: 12 AVLALAMTAGGCSSIRDHRGYLVDPALTQSVLPGVDNRLSVERSLGQPTLKSQF---GQA 68
Query: 81 SFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNR-RFNPNPHTIPA 139
++YYVS P F P+I ++KI F G V V+ + + R P+ H+
Sbjct: 69 TWYYVSLDTLQKP--FTRPRIHSGSIMKIAFDAAGNVQQVANDGVEKAVRIEPDQHSTAT 126
Query: 140 PIQTADGF 147
F
Sbjct: 127 LGHERSFF 134
>gi|77463170|ref|YP_352674.1| hypothetical protein RSP_2616 [Rhodobacter sphaeroides 2.4.1]
gi|77387588|gb|ABA78773.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
Length = 165
Score = 62.8 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 7/138 (5%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGNR 78
AL + + +V Y + G + + G +R V E +G PS S L N +
Sbjct: 20 ALGLSLAVVVAACQPIYRNH-GYVPTEIDLQRIEVGRDTRDSVAEIVGRPSASTLLNDSG 78
Query: 79 SQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIP 138
+YYV + + + + P+ ++ V+ ITF G V ++ L + P +
Sbjct: 79 ---WYYVQSRYRHYGAR--EPQEVDRQVVAITFNPTGTVRNIERFGLEKGQIVPLSRRVT 133
Query: 139 APIQTADGFLRRLLNPNG 156
GFLR+L G
Sbjct: 134 DTTIEGTGFLRQLFGNIG 151
>gi|146277945|ref|YP_001168104.1| SmpA/OmlA domain-containing protein [Rhodobacter sphaeroides ATCC
17025]
gi|145556186|gb|ABP70799.1| SmpA/OmlA domain protein [Rhodobacter sphaeroides ATCC 17025]
Length = 160
Score = 62.4 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 56/138 (40%), Gaps = 7/138 (5%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGNR 78
AL + + V Y + G + + G +R V E +G PS S L N +
Sbjct: 20 ALALSLGLAVGACQPIYRNH-GYVPTEIDLRQIEVGRDTRDTVAEIVGRPSASTLLNDSG 78
Query: 79 SQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIP 138
+YYV + + + + P+ ++ V+ ITF E G V ++ L + P +
Sbjct: 79 ---WYYVQSRYRHYGAR--EPQEVDREVVAITFSEAGTVRNIERFGLEKGQIVPLSRRVT 133
Query: 139 APIQTADGFLRRLLNPNG 156
GFLR+L G
Sbjct: 134 ESTIQGTGFLRQLFGNIG 151
>gi|221639027|ref|YP_002525289.1| SmpA/OmlA domain-containing protein [Rhodobacter sphaeroides KD131]
gi|221159808|gb|ACM00788.1| SmpA/OmlA domain protein [Rhodobacter sphaeroides KD131]
Length = 138
Score = 62.0 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 6/117 (5%)
Query: 41 GASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G + + G +R V E +G PS S L N + +YYV + + + + P
Sbjct: 13 GYVPTEIDLQRIEVGRDTRDSVAEIVGRPSASTLLNDSG---WYYVQSRYRHYGAR--EP 67
Query: 100 KIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIPAPIQTADGFLRRLLNPNG 156
+ ++ V+ ITF G V ++ L + P + GFLR+L G
Sbjct: 68 QEVDRQVVAITFNPSGTVRNIERFGLEKGQIVPLSRRVTDTTIEGTGFLRQLFGNIG 124
>gi|85372869|ref|YP_456931.1| tmRNA-binding small protein A [Erythrobacter litoralis HTCC2594]
gi|84785952|gb|ABC62134.1| tmRNA-binding small protein A [Erythrobacter litoralis HTCC2594]
Length = 142
Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 8/133 (6%)
Query: 26 IGLVVDYHVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGNRSQSFYY 84
+GL + + G +D + V G +R V +LG P+F ++YY
Sbjct: 1 MGLALSSCGTIRESRGYVVDQLLLDRVQPGIDNRQSVAATLGRPTFESQF---GEPTWYY 57
Query: 85 VSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRF-NPNPHTIPAPIQT 143
VS P F+ P+I + VL + F + G V + + + + P+ P +
Sbjct: 58 VSSVTGRRP--FVRPRIRTHQVLAVRFDQAGNVIATDISGIEQVAYITPDGDKTPTLGRE 115
Query: 144 ADGFLRRLLNPNG 156
GFL L G
Sbjct: 116 -RGFLEDLFGNIG 127
>gi|103488270|ref|YP_617831.1| tmRNA-binding small protein A [Sphingopyxis alaskensis RB2256]
gi|98978347|gb|ABF54498.1| tmRNA-binding small protein A [Sphingopyxis alaskensis RB2256]
Length = 161
Score = 61.7 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 45/117 (38%), Gaps = 7/117 (5%)
Query: 33 HVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKW 91
G +D + ++ G +R V +LG P+F +YYVS ++
Sbjct: 29 CAQLKGRQGYVVDPALTEAITPGVDNRESVERTLGRPTFVGQFGTGE---YYYVS--RET 83
Query: 92 FPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLP-NRRFNPNPHTIPAPIQTADGF 147
+ F P+ + VL+I F G V++V L + +P P + F
Sbjct: 84 RQLAFAKPRPIAQQVLRIRFDAAGNVAAVDRTGLELVSKISPEGDKTPTLGRERSFF 140
>gi|89069692|ref|ZP_01157029.1| hypothetical protein OG2516_00205 [Oceanicola granulosus HTCC2516]
gi|89044772|gb|EAR50878.1| hypothetical protein OG2516_00205 [Oceanicola granulosus HTCC2516]
Length = 158
Score = 61.3 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 6/120 (5%)
Query: 39 ISGASLDMS-AISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFL 97
G + + L +R V + +G P+ + + + FYYV + + F L
Sbjct: 33 HHGYVPNERDLLELTPGVDTRETVADLVGQPTAGGVLDDSG---FYYVQSRFRHFGP--L 87
Query: 98 SPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIPAPIQTADGFLRRLLNPNGR 157
P+ + V+ I+F + GVV ++ L + R + F+R+LL GR
Sbjct: 88 GPQEIAREVVAISFTDDGVVRNIERFGLEDGRMVELSRRVTDDNIRDTTFIRQLLGNLGR 147
>gi|163741398|ref|ZP_02148789.1| lipoprotein, SmpA/OmlA family [Phaeobacter gallaeciensis 2.10]
gi|161385132|gb|EDQ09510.1| lipoprotein, SmpA/OmlA family [Phaeobacter gallaeciensis 2.10]
Length = 126
Score = 61.3 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 6/117 (5%)
Query: 41 GASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G +S V G ++ +V E++G P+ + +YYVS + P
Sbjct: 6 GYVPSEELLSEVVVGVDTKDNVAETVGVPAAEGVLTDGG---YYYVSTLMRRRGPSASKP 62
Query: 100 KIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIPAPIQTADGFLRRLLNPNG 156
+ ++ I F ++GVV+ + L R P + + FLR+LL G
Sbjct: 63 --VSRELVAINFNDQGVVTGIERYGLEQGRVIPLQRRVTSSNVQDKTFLRQLLGSLG 117
>gi|294013454|ref|YP_003546914.1| putative small protein A [Sphingobium japonicum UT26S]
gi|292676784|dbj|BAI98302.1| putative small protein A [Sphingobium japonicum UT26S]
Length = 196
Score = 60.9 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 7/112 (6%)
Query: 38 SISGASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKF 96
+ G +D + + G +R+ V +LG PSF Q +YYVS + + F
Sbjct: 60 THQGYQVDKLLVDSIQPGIDNRASVEGTLGRPSFVAQF---GDQDWYYVS--RDMRSLAF 114
Query: 97 LSPKIMEYIVLKITFGEKGVVSSVSMERL-PNRRFNPNPHTIPAPIQTADGF 147
SPK + VL + F G V +V L + +P+ P + F
Sbjct: 115 SSPKPVSQTVLHVRFDAAGNVVAVDRMGLEQVAKISPSGDKTPTLGRHRSLF 166
>gi|260575267|ref|ZP_05843267.1| conserved hypothetical protein [Rhodobacter sp. SW2]
gi|259022527|gb|EEW25823.1| conserved hypothetical protein [Rhodobacter sp. SW2]
Length = 167
Score = 60.5 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 54/144 (37%), Gaps = 10/144 (6%)
Query: 15 LSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGS-SRSHVIESLGSPSFSIL 73
L L ++ + + ++ G + V G+ +R V +G PS + L
Sbjct: 25 LWLGAMLCVVAVTACTPIYRNH----GYVPTDLELEQVKVGTDTRETVAAVIGRPSAAGL 80
Query: 74 HNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPN 133
N +YYV + +W + +E V+ ITF E GVV +V L R P
Sbjct: 81 LNDLG---WYYV--QSRWKSYGPRPAEEVERQVVAITFTEAGVVENVERFGLEKGRVVPL 135
Query: 134 PHTIPAPIQTADGFLRRLLNPNGR 157
+ + +LL GR
Sbjct: 136 SRRVTKTGIKGISLIEQLLGSLGR 159
>gi|218515063|ref|ZP_03511903.1| SmpA/OmlA domain protein [Rhizobium etli 8C-3]
Length = 74
Score = 60.5 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 107 LKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTADGFLRRLLNPNGRSA 159
+ I F + GVVS + L + + F+ P + FL+++L+ ++
Sbjct: 1 MAIYFDKDGVVSRRANYTLQDGKVFDTIGRVTPTGGKELT-FLQQMLSGGSAAS 53
>gi|307296338|ref|ZP_07576165.1| SmpA/OmlA domain-containing protein [Sphingobium chlorophenolicum
L-1]
gi|306878140|gb|EFN09363.1| SmpA/OmlA domain-containing protein [Sphingobium chlorophenolicum
L-1]
Length = 188
Score = 60.5 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 7/112 (6%)
Query: 38 SISGASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKF 96
+ G +D + V G +R+ V +LG PSF Q +YYVS + + F
Sbjct: 52 THQGYQVDKLLVDSVQPGIDNRASVEGTLGRPSFVAQF---GDQDWYYVS--RDMRALAF 106
Query: 97 LSPKIMEYIVLKITFGEKGVVSSVSMERL-PNRRFNPNPHTIPAPIQTADGF 147
+PK + VL + F G V +V L + +P+ P + F
Sbjct: 107 SNPKPVAQTVLHVRFDAAGNVVAVDRMGLEQVAKISPSGDKTPTLGRHRSLF 158
>gi|114327674|ref|YP_744831.1| SmpA/OmlA family lipoprotein [Granulibacter bethesdensis CGDNIH1]
gi|114315848|gb|ABI61908.1| lipoprotein (SmpA/OmlA family) [Granulibacter bethesdensis CGDNIH1]
Length = 169
Score = 60.1 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 65/147 (44%), Gaps = 12/147 (8%)
Query: 17 FNKALFIIVIGLVVDYHVSYGS----ISGASLDMSAI-SLVSQGSSRSHVIESLGSPSFS 71
++ L ++ + + S+ + + G +D+ + L S+++ V LGSP+
Sbjct: 7 LSRTLAVLTLSATLLGGCSFFAPDRVVRGNKVDVDLLKELTPGTSTQADVASLLGSPTTK 66
Query: 72 ILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-F 130
+ N+ + Y++Q + + I++ V+ ++F + GV+ ++ + +
Sbjct: 67 ATFDNNQ---WVYITQTTEMQIAG--TNDILQQNVVTVSFDQNGVLKNIKLYGKDDAAPV 121
Query: 131 NPNPHTIPAPIQTADGFLRRLLNPNGR 157
+ P+P A ++++L GR
Sbjct: 122 SMVRRATPSPGSEAS-WMQQLFGNVGR 147
>gi|294677444|ref|YP_003578059.1| SmpA/OmlA domain-containing protein [Rhodobacter capsulatus SB
1003]
gi|294476264|gb|ADE85652.1| SmpA/OmlA domain protein [Rhodobacter capsulatus SB 1003]
Length = 154
Score = 59.7 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 52/136 (38%), Gaps = 6/136 (4%)
Query: 23 IIVIGLVVDYHVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGNRSQS 81
+ L G + ++ + G SSR V +G PS + G
Sbjct: 15 TVAAVLFAAGCTPIYQNHGYVPTETDLAKIEVGKSSREEVSAVIGRPSSMGVLQGAG--- 71
Query: 82 FYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIPAPI 141
++YV + K + + +P+ ++ V+ I+F +KG+V +V + +
Sbjct: 72 WFYVGSRWKHYGAR--APQEIDRQVVAISFDDKGMVENVERFGMERGEVVVLSRRVTKSN 129
Query: 142 QTADGFLRRLLNPNGR 157
G +R LL GR
Sbjct: 130 IKGLGLVRELLGSFGR 145
>gi|260433452|ref|ZP_05787423.1| lipoprotein, SmpA/OmlA family [Silicibacter lacuscaerulensis
ITI-1157]
gi|260417280|gb|EEX10539.1| lipoprotein, SmpA/OmlA family [Silicibacter lacuscaerulensis
ITI-1157]
Length = 156
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 61/139 (43%), Gaps = 7/139 (5%)
Query: 19 KALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGN 77
+AL + V Y + G ++ + G +RS V E +G+P+ S + +
Sbjct: 13 RALACVTFLAVAACTPVYKNH-GYVPTPEELAEIKVGVDTRSSVEEKVGAPTSSGVLKDS 71
Query: 78 RSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTI 137
+YYV + + + K P+++E ++ ++F ++GVV ++ L + +
Sbjct: 72 G---YYYVRSRVRHYGPK--RPEVVERQLVAVSFDQRGVVRNIERFGLEDGYVVVLDRRV 126
Query: 138 PAPIQTADGFLRRLLNPNG 156
GFLR+LL G
Sbjct: 127 TDSSVQDRGFLRQLLGNIG 145
>gi|332187048|ref|ZP_08388789.1| smpA / OmlA family protein [Sphingomonas sp. S17]
gi|332013058|gb|EGI55122.1| smpA / OmlA family protein [Sphingomonas sp. S17]
Length = 166
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Query: 38 SISGASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKF 96
S G +D ++ + G +R V+++LG+P+ + NG +YYV+ + + F
Sbjct: 29 SHQGYVVDTDLVNAIQPGVDNRQSVLQTLGTPTITSQFNGGD---WYYVA--RDSRNLGF 83
Query: 97 LSPKIMEYIVLKITFGEKGVVSSVSMERL-PNRRFNPNPHTIPAPIQTADGFLRRLLN 153
P + I L+I+F G V+++ + +P T P + + GF + L
Sbjct: 84 NLPHPVSQITLQISFDPAGNVTAIRRSGVDQVADISPYGKTTPTLGR-SRGFFQDLFG 140
>gi|296532923|ref|ZP_06895584.1| SmpA/OmlA family protein [Roseomonas cervicalis ATCC 49957]
gi|296266753|gb|EFH12717.1| SmpA/OmlA family protein [Roseomonas cervicalis ATCC 49957]
Length = 175
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 9/120 (7%)
Query: 41 GASLDMSAI-SLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G +D + L +++ V LG PS + + N +YY+S + P +
Sbjct: 43 GNRVDQDLLAQLTPGVQTQADVQSLLGPPSATGTFDRNE---WYYISSVTRMRPGT--TG 97
Query: 100 KIMEYIVLKITFGEKGVVSSVSMERLPNRRFN--PNPHTIPAPIQTADGFLRRLLNPNGR 157
+++ V+ + F E+G + + + R + T P P L+ L GR
Sbjct: 98 SVLDRQVVAMRFDERGTLRQIRRLGEDDMRDDVGMVGRTTPVPGTERT-VLQALFGNIGR 156
>gi|162148849|ref|YP_001603310.1| SmpA/OmlA family lipoprotein [Gluconacetobacter diazotrophicus PAl
5]
gi|209545402|ref|YP_002277631.1| SmpA/OmlA domain-containing protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|161787426|emb|CAP57021.1| Lipoprotein SmpA/OmlA family [Gluconacetobacter diazotrophicus PAl
5]
gi|209533079|gb|ACI53016.1| SmpA/OmlA domain protein [Gluconacetobacter diazotrophicus PAl 5]
Length = 189
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 7/109 (6%)
Query: 50 SLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKI 109
L S+RS V++ LGSP+ + N ++ Y+S + + P+ F P I + V+ +
Sbjct: 53 QLKPGVSTRSDVMDLLGSPTTHATFDDN---TWIYISMETVYVPISF--PGIRKQDVVVL 107
Query: 110 TFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTADGFLRRLLNPNGR 157
F GV+ ++ L N R +P P P + ++++L GR
Sbjct: 108 NFDNGGVLRNLRTLNLKNARPVTMSPDVTPTPGTRIN-IVQQILGNVGR 155
>gi|84516332|ref|ZP_01003692.1| lipoprotein, SmpA/OmlA family [Loktanella vestfoldensis SKA53]
gi|84510028|gb|EAQ06485.1| lipoprotein, SmpA/OmlA family [Loktanella vestfoldensis SKA53]
Length = 159
Score = 58.6 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 50/127 (39%), Gaps = 8/127 (6%)
Query: 33 HVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGNRSQSFYYV-SQKKK 90
+G + ++ V G ++R+ V+ G+P G RS + YYV SQ +
Sbjct: 25 CTPMTRFNGFAPAARELAQVQIGQTTRADVVTLFGAP---TSDGGMRSDTIYYVASQFDR 81
Query: 91 WFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIPAPIQTADGFLRR 150
P PK ++ V+ + F V +V+ L + R + G L +
Sbjct: 82 IGPFA---PKEVDRTVIAVRFDSAERVRNVTRYTLQDGRIVQLDRRVTDDGIEDIGVLEQ 138
Query: 151 LLNPNGR 157
LL GR
Sbjct: 139 LLGSFGR 145
>gi|258542779|ref|YP_003188212.1| lipoprotein SmpA/OmlA [Acetobacter pasteurianus IFO 3283-01]
gi|256633857|dbj|BAH99832.1| lipoprotein SmpA/OmlA [Acetobacter pasteurianus IFO 3283-01]
gi|256636916|dbj|BAI02885.1| lipoprotein SmpA/OmlA [Acetobacter pasteurianus IFO 3283-03]
gi|256639969|dbj|BAI05931.1| lipoprotein SmpA/OmlA [Acetobacter pasteurianus IFO 3283-07]
gi|256643025|dbj|BAI08980.1| lipoprotein SmpA/OmlA [Acetobacter pasteurianus IFO 3283-22]
gi|256646080|dbj|BAI12028.1| lipoprotein SmpA/OmlA [Acetobacter pasteurianus IFO 3283-26]
gi|256649133|dbj|BAI15074.1| lipoprotein SmpA/OmlA [Acetobacter pasteurianus IFO 3283-32]
gi|256652120|dbj|BAI18054.1| lipoprotein SmpA/OmlA [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655177|dbj|BAI21104.1| lipoprotein SmpA/OmlA [Acetobacter pasteurianus IFO 3283-12]
Length = 185
Score = 58.6 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 52/137 (37%), Gaps = 7/137 (5%)
Query: 22 FIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQS 81
+I + + + L+ S+R+ ++ LGSP+ + N +
Sbjct: 21 AVIALSGCAVFGPTPTPRGSLIEADDYNQLIPGASTRADALDLLGSPTTKGAFDDN---T 77
Query: 82 FYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAP 140
+ Y+S P+ F P I + V+ + F + G + S+ + R P P
Sbjct: 78 WIYISMSTYLIPMDF--PGIGKQQVVVLKFDDAGNLQSLRTLNKKDSRSVAMINSITPTP 135
Query: 141 IQTADGFLRRLLNPNGR 157
+ L+++L GR
Sbjct: 136 GTKIN-ILQQILGNVGR 151
>gi|296116571|ref|ZP_06835181.1| SmpA/OmlA domain protein [Gluconacetobacter hansenii ATCC 23769]
gi|295976783|gb|EFG83551.1| SmpA/OmlA domain protein [Gluconacetobacter hansenii ATCC 23769]
Length = 189
Score = 58.2 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 63/146 (43%), Gaps = 8/146 (5%)
Query: 14 KLSFNKALFI-IVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSI 72
+L + + + + V + S L + SSRS V++ LGSP+
Sbjct: 15 RLFSCAVIGVGLSLSGCVAFKPSVIQRGSLVQADDYNQLKTGKSSRSDVMDLLGSPTSRA 74
Query: 73 LHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRF-N 131
+ N ++ Y+S ++ P+ F P I + V+ +TF E G++ ++ + R+ +
Sbjct: 75 TFDDN---TWIYISMRQTLAPISF--PHIDKQQVVVLTFDEGGILRNLRTLHKDDARYVS 129
Query: 132 PNPHTIPAPIQTADGFLRRLLNPNGR 157
P P + ++++L GR
Sbjct: 130 MAMGKTPTPGTKIN-IMQQILGNVGR 154
>gi|304321202|ref|YP_003854845.1| lipoprotein, SmpA/OmlA family protein [Parvularcula bermudensis
HTCC2503]
gi|303300104|gb|ADM09703.1| lipoprotein, SmpA/OmlA family protein [Parvularcula bermudensis
HTCC2503]
Length = 147
Score = 57.4 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 46/144 (31%), Gaps = 9/144 (6%)
Query: 19 KALFIIVIGLVVDYHVSYGSISGASLDMSAISL-VSQG-SSRSHVIESLGSPSFSILHNG 76
+ + +I + V+ G ++ L + G ++ V+ G PS
Sbjct: 2 RIVVFGLIVSALSACVAVEDRHGYVMERGETELSATVGVDTKDSVLARYGEPSIR---PP 58
Query: 77 NRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNPNPH 135
+YYV+ F + ++ F E V+ V L + + N
Sbjct: 59 LSDDVWYYVTSSSSSR--AFYETETTSRNIVLFAFNEDDTVADVMTFDLEDGQDINLVNR 116
Query: 136 TIPAPIQTADGFLRRLLNPNGRSA 159
+ F +L+ G+ A
Sbjct: 117 VTRTRGKELS-FFEQLIGGVGQGA 139
>gi|254450474|ref|ZP_05063911.1| lipoprotein, SmpA/OmlA family [Octadecabacter antarcticus 238]
gi|198264880|gb|EDY89150.1| lipoprotein, SmpA/OmlA family [Octadecabacter antarcticus 238]
Length = 174
Score = 57.0 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 35/155 (22%), Positives = 60/155 (38%), Gaps = 8/155 (5%)
Query: 4 ILFLNNFFFGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQG-SSRSHVI 62
L L+ G+ + + +++ V + G ++ V G +R V
Sbjct: 17 RLQLSMNITGRKTRAALVACVLMMTVG--CTTLYRNHGYIPSDDQLAEVLVGVDTRGTVF 74
Query: 63 ESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSM 122
+ +G P+ + +G FY S+ + P L PK ++ V+ I F + GVVS+V
Sbjct: 75 DIIGPPTAGGVTDGGGY--FYVQSRFQLIGP---LEPKEIDREVVAIQFDDTGVVSNVER 129
Query: 123 ERLPNRRFNPNPHTIPAPIQTADGFLRRLLNPNGR 157
L N + FLR+L GR
Sbjct: 130 FGLENGNVVALSRRVTQDNVRDTTFLRQLFGSIGR 164
>gi|329850590|ref|ZP_08265435.1| smpA / OmlA family protein [Asticcacaulis biprosthecum C19]
gi|328840905|gb|EGF90476.1| smpA / OmlA family protein [Asticcacaulis biprosthecum C19]
Length = 146
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 51/133 (38%), Gaps = 9/133 (6%)
Query: 28 LVVDYHVSYGSISGAS-LDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVS 86
++ S SG D + G +++ V++ LG PS + + +YY+
Sbjct: 2 VLASACAPTVSHSGYLAYDALPSKDIKVGDTKATVLDKLGDPSQTSAYKPTE---WYYID 58
Query: 87 QKKKWFPVKFLSPKIMEYIVLKITFGEKGV-VSSVSMERLPNRR-FNPNPHTIPAPIQTA 144
Q + + + ++ V I F G V V L + R PN + P ++
Sbjct: 59 QTSQ--KMTYKQARVTARNVTVINFDPTGQTVEEVKTLYLADGRDLTPNQNKTPTRGRSL 116
Query: 145 DGFLRRLLNPNGR 157
L ++L G+
Sbjct: 117 TA-LEQVLGTVGQ 128
>gi|119384629|ref|YP_915685.1| hypothetical protein Pden_1894 [Paracoccus denitrificans PD1222]
gi|119374396|gb|ABL69989.1| conserved hypothetical protein [Paracoccus denitrificans PD1222]
Length = 151
Score = 56.3 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Query: 41 GASLDMSAISLVSQGSSRSHVIESL-GSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G ++ V+ G + +E L G PS L G+ ++YYV + + + + P
Sbjct: 30 GYIPPEEQLAQVTVGQTTQSDLEGLIGRPSAQGLLTGS---AWYYVGSRWQHYGPR--EP 84
Query: 100 KIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIPAPIQTADGFLRRLLNPNGR 157
+ ++ VL ++F E GVVS+V L + + T+ G +R+LL GR
Sbjct: 85 REIDRQVLAVSFAESGVVSNVERFGLERGQVVVLSRRVTDTGVTSLGLIRQLLGNVGR 142
>gi|254459971|ref|ZP_05073387.1| lipoprotein, SmpA/OmlA family [Rhodobacterales bacterium HTCC2083]
gi|206676560|gb|EDZ41047.1| lipoprotein, SmpA/OmlA family [Rhodobacteraceae bacterium HTCC2083]
Length = 86
Score = 55.9 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 82 FYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIPAPI 141
+YYV + + + P++++ V+ ++F G+V ++ L + P I
Sbjct: 6 YYYV--RSRVKHFTWQKPEVIDRQVVAVSFNNGGIVENIGRYTLQDGAVIPLARRITRNG 63
Query: 142 QTADGFLRRLLNPNG 156
Q F++ +L+ G
Sbjct: 64 QDVS-FIKSILSKVG 77
>gi|303256773|ref|ZP_07342787.1| outer membrane lipoprotein OmlA [Burkholderiales bacterium 1_1_47]
gi|330999576|ref|ZP_08323288.1| SmpA / OmlA family protein [Parasutterella excrementihominis YIT
11859]
gi|302860264|gb|EFL83341.1| outer membrane lipoprotein OmlA [Burkholderiales bacterium 1_1_47]
gi|329574463|gb|EGG56030.1| SmpA / OmlA family protein [Parasutterella excrementihominis YIT
11859]
Length = 172
Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 1 MKKILFLNNFFFGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSH 60
MK+ +F LS ++ + G + Y G + + + +G +++
Sbjct: 1 MKRFIFCALIPLTLLSGCSSVGDHIPGWLKPYTPDV--HQGNVVTSEMVDALHEGMTKNQ 58
Query: 61 VIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIV--LKITFGEKGVVS 118
VI LG+P+ L K++W V FL P+ E + L+ITF E G V
Sbjct: 59 VIFLLGTPALRNLF------------HKEQWNYVYFLKPRFGETSIRKLEITFDEDGRVE 106
Query: 119 SVSMERLPN 127
S +R+P+
Sbjct: 107 SFKSDRMPD 115
>gi|329114622|ref|ZP_08243381.1| SmpA/OmlA Domain-Containing Protein [Acetobacter pomorum DM001]
gi|326696102|gb|EGE47784.1| SmpA/OmlA Domain-Containing Protein [Acetobacter pomorum DM001]
Length = 147
Score = 55.1 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 7/109 (6%)
Query: 50 SLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKI 109
L+ S+R+ ++ LGSP+ + N ++ Y+S P+ F P I + V+ +
Sbjct: 9 QLIPGASTRADALDLLGSPTTKGAFDDN---TWIYISMSTYLIPMDF--PGIGKQQVVVL 63
Query: 110 TFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTADGFLRRLLNPNGR 157
F + G + S+ + R P P + L+++L GR
Sbjct: 64 KFDDAGNLQSLRTLNKKDSRSVAMINSITPTPGTKIN-ILQQILGNVGR 111
>gi|254439885|ref|ZP_05053379.1| hypothetical protein OA307_4755 [Octadecabacter antarcticus 307]
gi|198255331|gb|EDY79645.1| hypothetical protein OA307_4755 [Octadecabacter antarcticus 307]
Length = 174
Score = 55.1 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 57/140 (40%), Gaps = 6/140 (4%)
Query: 19 KALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGN 77
+A + + ++ + G + ++ V G +R V++ +G P+ + NG
Sbjct: 30 RAALVACVLMMSVGCTTLYRNHGYTPTDDQLAEVLVGVDTRDSVVDVIGPPTAGGMTNGG 89
Query: 78 RSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTI 137
FY S+ + P L P+ ++ ++ I F + GVVS+V L N +
Sbjct: 90 GY--FYVQSRFRLLGP---LEPQEIDREIVAIRFDDTGVVSNVERFGLENGNVVALSRRV 144
Query: 138 PAPIQTADGFLRRLLNPNGR 157
F+R+L GR
Sbjct: 145 TQDNVRDTTFIRQLFGSIGR 164
>gi|330994012|ref|ZP_08317942.1| SmpA/OmlA domain-containing protein [Gluconacetobacter sp. SXCC-1]
gi|329758958|gb|EGG75472.1| SmpA/OmlA domain-containing protein [Gluconacetobacter sp. SXCC-1]
Length = 152
Score = 54.7 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 41 GASLDMSAISLVSQG-SSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G+ ++ + + G +SRS V+++LGSP+ + N ++ YVS P+ F P
Sbjct: 5 GSLVEADDYNKLKVGETSRSDVMDALGSPTGRATFDDN---TWIYVSMTHVLVPISF--P 59
Query: 100 KIMEYIVLKITFGEKGVVSSVSMERLPNRRF-NPNPHTIPAPIQTADGFLRRLLNPNGR 157
++ + V+ +TF + G++ ++ + R+ P P + ++++L GR
Sbjct: 60 QVRKQDVVVLTFDQNGILRNLRSLHKNDARYVTMAAGRTPTPGTKIN-IMQQILGNVGR 117
>gi|114771808|ref|ZP_01449201.1| lipoprotein, SmpA/OmlA family [alpha proteobacterium HTCC2255]
gi|114547624|gb|EAU50515.1| lipoprotein, SmpA/OmlA family [alpha proteobacterium HTCC2255]
Length = 150
Score = 54.3 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 53/138 (38%), Gaps = 7/138 (5%)
Query: 23 IIVIGLVVDYHVSYGSIS-GASLDMSAISLVSQGS-SRSHVIESLGSPSFSILHNGNRSQ 80
I+ + S G + + V G +R+ V E LGSPS S +
Sbjct: 10 TIIFSTFLLASCSTIYKDHGYLPLDTDLKSVVVGKDTRNSVTELLGSPSGSGVLEDG--- 66
Query: 81 SFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIPAP 140
+ +Y+S K F PK++ ++ ++F EK +V ++ L + R + +
Sbjct: 67 AIFYIS--TKIKNFLFYEPKVVSRDMIVVSFDEKNLVENIEKFTLEDGRVVVLSRRVTSA 124
Query: 141 IQTADGFLRRLLNPNGRS 158
L ++ G +
Sbjct: 125 PVKGPRILSQIFGNLGNA 142
>gi|58038605|ref|YP_190569.1| hypothetical protein GOX0119 [Gluconobacter oxydans 621H]
gi|58001019|gb|AAW59913.1| Hypothetical protein GOX0119 [Gluconobacter oxydans 621H]
Length = 190
Score = 54.3 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 7/109 (6%)
Query: 50 SLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKI 109
LV S+R+ V++ LGSP+ + N ++ YVS P+ F P + + V+ +
Sbjct: 55 QLVPGTSTRTDVLDLLGSPTAHATFDDN---TWIYVSMITSPTPLTF--PSVKKQQVVVL 109
Query: 110 TFGEKGVVSSVSMERLPNRRF-NPNPHTIPAPIQTADGFLRRLLNPNGR 157
F GV+ + N + P P ++ L+ LL GR
Sbjct: 110 NFDNGGVLRKMDTLNKKNAIYVGMVGAKTPTPGTSSS-ILQELLGNVGR 157
>gi|159044265|ref|YP_001533059.1| hypothetical protein Dshi_1716 [Dinoroseobacter shibae DFL 12]
gi|157912025|gb|ABV93458.1| hypothetical protein Dshi_1716 [Dinoroseobacter shibae DFL 12]
Length = 152
Score = 54.0 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 56/143 (39%), Gaps = 6/143 (4%)
Query: 15 LSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQG-SSRSHVIESLGSPSFSIL 73
+ L + V L + + SG + ++ ++ G RS V + +G P +
Sbjct: 6 ALLFRGLVVGVALLALGGCAATYRNSGYVPSEADLAEITVGIDDRSSVEDQVGRPVSQGV 65
Query: 74 HNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPN 133
+++Y+V +W + +P+ ++ V+ I+F E G V ++ L +
Sbjct: 66 I---ADRAWYFVG--TRWEYFAYRAPQPIDRQVVAISFDEGGTVQNIERFSLADGEVISL 120
Query: 134 PHTIPAPIQTADGFLRRLLNPNG 156
+ +R+LL G
Sbjct: 121 NRRVTDSNIEGVSLIRQLLGNIG 143
>gi|315499918|ref|YP_004088721.1| smpa/omla domain-containing protein [Asticcacaulis excentricus CB
48]
gi|315417930|gb|ADU14570.1| SmpA/OmlA domain-containing protein [Asticcacaulis excentricus CB
48]
Length = 163
Score = 50.5 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 49/134 (36%), Gaps = 9/134 (6%)
Query: 27 GLVVDYHVSYGSISGASLDMSAISLVSQGS-SRSHVIESLGSPSFSILHNGNRSQSFYYV 85
+ S +++ + + + G +++ V GSPS + +YY+
Sbjct: 18 STLGACAPSVSRQGYLAIEANPATDIKVGEDTQTSVRTKFGSPSQVATFDPG---VWYYI 74
Query: 86 SQKKKWFPVKFLSPKIMEYIVLKITFGEKGV-VSSVSMERLPNRR-FNPNPHTIPAPIQT 143
+Q + + + V + F ++ V +V L + R NP+ P +
Sbjct: 75 TQTTS--KMTYKPATLTSRSVTIVEFDKETQAVKTVKTLSLADSRDIALNPNKTPTRGRE 132
Query: 144 ADGFLRRLLNPNGR 157
L ++L GR
Sbjct: 133 LTA-LEQILGNVGR 145
>gi|190570497|ref|YP_001974855.1| Putative lipoprotein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213019256|ref|ZP_03335063.1| putative lipoprotein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190356769|emb|CAQ54128.1| Putative lipoprotein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995365|gb|EEB56006.1| putative lipoprotein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 112
Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Query: 21 LFIIVIGLVVDYHVSYG-SISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
+ I++ V H + + G +++ S + G R V+ +LGSP+ + N
Sbjct: 5 ISFILLFTVSCTHTIHNHGVPG--INIELWSKIQVGDDREKVVHTLGSPTLVSKFDEN-- 60
Query: 80 QSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV 120
+YYVS K K FL + L+I+F + V+ +
Sbjct: 61 -VWYYVSYKIKQ--ANFLGKRKYSSKSLQISFNQNDEVTDI 98
>gi|42520109|ref|NP_966024.1| putative lipoprotein [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|58698233|ref|ZP_00373153.1| small protein A [Wolbachia endosymbiont of Drosophila ananassae]
gi|99035999|ref|ZP_01315040.1| hypothetical protein Wendoof_01000111 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|225630037|ref|YP_002726828.1| small protein A, tmRNA-binding [Wolbachia sp. wRi]
gi|225677303|ref|ZP_03788282.1| small protein A, tmRNA-binding [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|42409846|gb|AAS13958.1| lipoprotein, putative [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|58535260|gb|EAL59339.1| small protein A [Wolbachia endosymbiont of Drosophila ananassae]
gi|225590666|gb|EEH11914.1| small protein A, tmRNA-binding [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225592018|gb|ACN95037.1| small protein A, tmRNA-binding [Wolbachia sp. wRi]
Length = 112
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Query: 21 LFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQ 80
+ I++ V H + + + + S + G + V+ +LGSP+ + N
Sbjct: 5 ISFILLFTVSCTHTIH-NHGAPGISVELWSKIKVGDDKEKVVHTLGSPTLVSKFDDN--- 60
Query: 81 SFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVS 118
+YYVS K K FL + L+I+F + G V
Sbjct: 61 VWYYVSYKIKQ--ANFLGKRKYSSKSLQISFDQDGKVE 96
>gi|225025105|ref|ZP_03714297.1| hypothetical protein EIKCOROL_01997 [Eikenella corrodens ATCC
23834]
gi|224942066|gb|EEG23275.1| hypothetical protein EIKCOROL_01997 [Eikenella corrodens ATCC
23834]
Length = 134
Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 21/119 (17%)
Query: 12 FGKLSFNKALFIIVIGLVVDYHVSY-----------GSISGASLDMSAISLVSQGSSRSH 60
+ NK++++ + + S + G LD+ A++ + QG S+
Sbjct: 1 MKGMFVNKSVYLTLAACIGLAACSTERLARFPSYKLTIVQGNELDLQAVASLHQGLSKEQ 60
Query: 61 VIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSS 119
V LG+P +GNR + VS+ K E L + F +
Sbjct: 61 VQHILGTPLLRDPLHGNRWDYVFEVSRGGKVR----------ERKNLTLYFDANDSLVK 109
>gi|152978456|ref|YP_001344085.1| SmpA/OmlA domain-containing protein [Actinobacillus succinogenes
130Z]
gi|150840179|gb|ABR74150.1| SmpA/OmlA domain protein [Actinobacillus succinogenes 130Z]
Length = 137
Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 40/99 (40%), Gaps = 10/99 (10%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
+ + V G L+ S + + G +R V LG+P+ + +
Sbjct: 13 SFAVSACSTVEKVVYRIDVPQGNYLEQSTVEQLQVGMTREQVKYLLGTPALK---DPFST 69
Query: 80 QSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVS 118
Q++YYV +++ + +P E L + F + G V+
Sbjct: 70 QTWYYVYLQQR----AYETP---EQHTLTVNFNQAGNVT 101
>gi|58584526|ref|YP_198099.1| small protein A, tmRNA-binding [Wolbachia endosymbiont strain TRS
of Brugia malayi]
gi|58418842|gb|AAW70857.1| Small protein A, tmRNA-binding [Wolbachia endosymbiont strain TRS
of Brugia malayi]
Length = 111
Score = 47.0 bits (110), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 50 SLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKI 109
+ + G + VI +LGSP+ + +YY+S K K + FL + L+I
Sbjct: 32 NKIKVGDDKEKVIHTLGSPTLISKFD---EHIWYYISYKIKQ--INFLGKRKYSSKSLQI 86
Query: 110 TFGEKGVVSSV 120
+F + V+SV
Sbjct: 87 SFDQDDKVTSV 97
>gi|302879358|ref|YP_003847922.1| SmpA/OmlA domain-containing protein [Gallionella capsiferriformans
ES-2]
gi|302582147|gb|ADL56158.1| SmpA/OmlA domain-containing protein [Gallionella capsiferriformans
ES-2]
Length = 119
Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 45/107 (42%), Gaps = 20/107 (18%)
Query: 21 LFIIVIGLVVDYHVSYGSI----------SGASLDMSAISLVSQGSSRSHVIESLGSPSF 70
+ I+++ L++ S + G + + + G SR+ V +LG+P
Sbjct: 3 IKIVLLSLLLASCGSIDTPTLSPYKMDIRQGNFVTVEMRDKIKVGMSRAQVRYALGTPMI 62
Query: 71 SILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVV 117
S + +GNR Y + QK++ +++ L + F + +V
Sbjct: 63 SDVFHGNRWDYVYRLEQKRE----------LVDQQRLTLYFDGEHLV 99
>gi|332969389|gb|EGK08414.1| SmpA/OmlA family lipoprotein [Kingella kingae ATCC 23330]
Length = 125
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 10/91 (10%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLS 98
+ G L+ A+ V G SR V +G P +R FY V++
Sbjct: 33 VQGIPLEAEAVLAVKTGMSRQQVAMEIGMPLLRPSFRQDRWDYFYQVTRGG--------- 83
Query: 99 PKIMEYIVLKITFGEKGVVSSVSMERLPNRR 129
K+ E L + F G+VS V + L R
Sbjct: 84 -KVKESRTLAVFFDANGLVSRVEGDALDYAR 113
>gi|91204941|ref|YP_537296.1| tmRNA-binding protein [Rickettsia bellii RML369-C]
gi|157827731|ref|YP_001496795.1| tmRNA-binding protein [Rickettsia bellii OSU 85-389]
gi|91068485|gb|ABE04207.1| tmRNA-binding protein [Rickettsia bellii RML369-C]
gi|157803035|gb|ABV79758.1| tmRNA-binding protein [Rickettsia bellii OSU 85-389]
Length = 157
Score = 44.7 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 62/145 (42%), Gaps = 12/145 (8%)
Query: 15 LSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGS-SRSHVIESLGSPSFSIL 73
L F +F+I G S+D SA++ + S++ V+E +G+P+
Sbjct: 5 LIFVSTIFVIF----SLSGCQTIENRGQSIDDSALTKLEAKKLSKTEVVELIGTPTMIPE 60
Query: 74 HNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR-FNP 132
+ ++YYV + +L+PKI++ ++KITF + ++ + + +R
Sbjct: 61 Y---SQDTWYYVERVMSQR--AWLNPKIVKQRIVKITFDSRNLMQEIVVIDDSHRHDIET 115
Query: 133 NPHTIPAPIQTADGFLRRLLNPNGR 157
+G L++ + GR
Sbjct: 116 ISEYTKTYGTELNG-LQKFVKNLGR 139
>gi|82701610|ref|YP_411176.1| SmpA/OmlA [Nitrosospira multiformis ATCC 25196]
gi|82409675|gb|ABB73784.1| SmpA/OmlA [Nitrosospira multiformis ATCC 25196]
Length = 233
Score = 44.3 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 40/132 (30%), Gaps = 10/132 (7%)
Query: 14 KLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSIL 73
++ L + V G + ++ + G +RS V +LGSP S
Sbjct: 4 RIITLAVLLLAGCSSVPSLLYKIEIQQGNVITQEMVNKLKPGMTRSQVRFALGSPMISDA 63
Query: 74 HNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPN 133
+ NR Y Q+ K++E L I F + +V P
Sbjct: 64 FHENRWDYLYRFEQRG----------KLIEQRKLTIFFEDDHLVRIDGSFTAPVAFLQSQ 113
Query: 134 PHTIPAPIQTAD 145
P A
Sbjct: 114 PQVSEAGAAPES 125
>gi|257095276|ref|YP_003168917.1| SmpA/OmlA domain-containing protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047800|gb|ACV36988.1| SmpA/OmlA domain protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 160
Score = 44.3 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 48/134 (35%), Gaps = 26/134 (19%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L +S + G S V LG+P + + + NR F+++ + +
Sbjct: 35 QGNVLSQEMVSQLRPGLSMDQVRFILGTPVLADMFHANRWDYFFWLQKGRTGE------- 87
Query: 100 KIMEYIVLKITFGEKGVVSSVSMERLP-----------NRRFNPNPHTIPAPIQ------ 142
+E + F +G ++ V+ + P +R+ + ++P
Sbjct: 88 --VETRRFSVFFDAEGKLTRVAGDVTPAQPTDQPSASESRKREIDLSSLPTDGSATLPPA 145
Query: 143 TADGFLRRLLNPNG 156
GF R+L G
Sbjct: 146 DERGFFGRMLESVG 159
>gi|94311907|ref|YP_585117.1| SmpA/OmlA [Cupriavidus metallidurans CH34]
gi|93355759|gb|ABF09848.1| Lipoprotein [Cupriavidus metallidurans CH34]
Length = 258
Score = 43.9 bits (102), Expect = 0.006, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 9/85 (10%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLS 98
+ G + A+S + +G +R V LG+P + + + +R YY S ++ PV
Sbjct: 90 VQGNFVSREAVSQLREGMTRDQVRFLLGTPLLTDVFHADRWD--YYFSFRRGSRPV---- 143
Query: 99 PKIMEYIVLKITFGEKGVVSSVSME 123
++ + F +V V E
Sbjct: 144 ---VQSRQFTVYFEGDKLVRWVGNE 165
>gi|325266907|ref|ZP_08133578.1| small protein A [Kingella denitrificans ATCC 33394]
gi|324981648|gb|EGC17289.1| small protein A [Kingella denitrificans ATCC 33394]
Length = 124
Score = 43.9 bits (102), Expect = 0.006, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 10/91 (10%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLS 98
+ G LD +++ V +G +R V +G+P +R Y VS+
Sbjct: 33 VQGIPLDAASVLAVKEGMTRQQVEMEIGAPLLRPSFRADRWDYVYEVSRGG--------- 83
Query: 99 PKIMEYIVLKITFGEKGVVSSVSMERLPNRR 129
K+ E L I FG G V+ + + L R
Sbjct: 84 -KVKENRTLTIHFGADGTVNHIEGDALDFAR 113
>gi|226940355|ref|YP_002795429.1| SmpA/OmlA [Laribacter hongkongensis HLHK9]
gi|226715282|gb|ACO74420.1| SmpA/OmlA [Laribacter hongkongensis HLHK9]
Length = 135
Score = 43.9 bits (102), Expect = 0.006, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 43/126 (34%), Gaps = 15/126 (11%)
Query: 17 FNKALFIIVIGLVVDYHVSYGSIS-GASLDMSAISLVSQGSSRSHVIESLGSPSFSILHN 75
L + + I G + A+ + G +R+ V LG+P + + +
Sbjct: 7 LVVTLLLSACSMPGFLSPHTIDIQQGNVVTQDAVDKLRPGMTRAQVRFVLGTPLLTDMFH 66
Query: 76 GNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFN---P 132
R YV Q ++ ++ E + F ++ + P RR + P
Sbjct: 67 AQRWD---YVFQIRREG-------QLREEKRFTVYFDGD-RLTRWEGDTFPPRRADLAAP 115
Query: 133 NPHTIP 138
+ T P
Sbjct: 116 DAATTP 121
>gi|238020565|ref|ZP_04600991.1| hypothetical protein GCWU000324_00451 [Kingella oralis ATCC 51147]
gi|237867545|gb|EEP68551.1| hypothetical protein GCWU000324_00451 [Kingella oralis ATCC 51147]
Length = 127
Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 10/91 (10%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLS 98
+ G LD +A+ + G +R V +G+P + +R Y V +
Sbjct: 36 VQGIPLDANAVLALRAGMTRQQVAMEIGTPLLNNAFRTDRWDYVYEVVRGN--------- 86
Query: 99 PKIMEYIVLKITFGEKGVVSSVSMERLPNRR 129
K+ E+ L + F G VS + L R
Sbjct: 87 -KVKEHRNLSVYFDANGAVSRIEGNALDYAR 116
>gi|308050616|ref|YP_003914182.1| SmpA/OmlA domain protein [Ferrimonas balearica DSM 9799]
gi|307632806|gb|ADN77108.1| SmpA/OmlA domain protein [Ferrimonas balearica DSM 9799]
Length = 123
Score = 43.6 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 33/99 (33%), Gaps = 9/99 (9%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G ++ + + + G +R V LG P S ++YYV Q K
Sbjct: 34 QGNFIEQNQVEKLRIGMNREQVEFVLGRPVLRDSF---ASDTWYYVYQFKNGR------T 84
Query: 100 KIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIP 138
+ L + F + VVS L + P P
Sbjct: 85 NELTRKELVVHFADDAVVSVDGDYTLSDNFNTPLQGGRP 123
>gi|257454288|ref|ZP_05619554.1| SmpA/OmlA [Enhydrobacter aerosaccus SK60]
gi|257448305|gb|EEV23282.1| SmpA/OmlA [Enhydrobacter aerosaccus SK60]
Length = 127
Score = 43.6 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 43/122 (35%), Gaps = 9/122 (7%)
Query: 6 FLNNFFFGKLSFNKALFIIVIGLVVDYHVSYGSI------SGASLDMSAISLVSQGSSRS 59
+ K L ++ + V S+ S+ G + +S V G + +
Sbjct: 1 MTSITTLSKKLAVLPLVAVISSVSVLPGCSWFSVYKIDIPQGKPIHEDKLSQVQVGMNAN 60
Query: 60 HVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIME-YIVLKITFGEKGVVS 118
V+ LGSP+F N R Y + P I KI F + G+V+
Sbjct: 61 QVLYILGSPTFRDTLNPVRWDYLYDFTPGTNAKRAN--KPAIHNAQQYAKIYFDQNGIVT 118
Query: 119 SV 120
S+
Sbjct: 119 SI 120
>gi|290476148|ref|YP_003469048.1| small membrane protein A [Xenorhabdus bovienii SS-2004]
gi|289175481|emb|CBJ82284.1| small membrane protein A [Xenorhabdus bovienii SS-2004]
Length = 114
Score = 43.2 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 10/84 (11%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L +A+S + +G ++ V +LG+P + + SQ +YY+ + +
Sbjct: 34 QGNYLTPAAVSKIHKGMTQQQVAYTLGTPMLT---DPFGSQIWYYIFRDQPGHKKA---- 86
Query: 100 KIMEYIVLKITFGEKGVVSSVSME 123
L +TF GV++ + E
Sbjct: 87 ---TQETLTLTFDSNGVLTDIKNE 107
>gi|93005121|ref|YP_579558.1| SmpA/OmlA [Psychrobacter cryohalolentis K5]
gi|92392799|gb|ABE74074.1| SmpA/OmlA [Psychrobacter cryohalolentis K5]
Length = 138
Score = 43.2 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 41/126 (32%), Gaps = 7/126 (5%)
Query: 1 MKKILFLNNFFFGKLSFNKALFIIVIGLVVDYHVSYGSI------SGASLDMSAISLVSQ 54
M K L L F + I+ V S S+ G + + +
Sbjct: 6 MIKTLNLRPFHSSSALRKIVITSILGAAVTMSGCSLLSVYKIDLPQGTPITQTQAQKLQV 65
Query: 55 GSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEK 114
G +++ V+ LGSP+ NR Y + K LK+ F
Sbjct: 66 GMNQNQVLYLLGSPAIRDTLEPNRWDYIYDYQAGTEGQRRGIADVKNASQH-LKVYFDNN 124
Query: 115 GVVSSV 120
G+V+ +
Sbjct: 125 GIVTRI 130
>gi|294789619|ref|ZP_06754853.1| lipoprotein, SmpA/OmlA family [Simonsiella muelleri ATCC 29453]
gi|294482420|gb|EFG30113.1| lipoprotein, SmpA/OmlA family [Simonsiella muelleri ATCC 29453]
Length = 124
Score = 42.8 bits (99), Expect = 0.016, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 32/91 (35%), Gaps = 11/91 (12%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLS 98
+ G LD A+ + G +R V +LG P N+ Y ++
Sbjct: 33 VQGMPLDADAVMSLQTGMTREQVELTLGKPLLRPAFRDNQWVYDYAITHGG--------- 83
Query: 99 PKIMEYIVLKITFGEKGVVSSVSMERLPNRR 129
KI E L + F V+ +S L R
Sbjct: 84 -KIKEKRDLTVYFNGD-RVARISGSALDYAR 112
>gi|52425967|ref|YP_089104.1| SmpA protein [Mannheimia succiniciproducens MBEL55E]
gi|52308019|gb|AAU38519.1| SmpA protein [Mannheimia succiniciproducens MBEL55E]
Length = 137
Score = 42.8 bits (99), Expect = 0.016, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 10/100 (10%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
AL + V G L+ +A+S + G +R V LG+P +L++ +
Sbjct: 13 ALSVTSCSTVSKVVYRVDVPQGNYLESAAVSQLQVGMTREQVQYILGTP---VLNDPFST 69
Query: 80 QSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSS 119
++YYV +++ + + E L + F ++G V S
Sbjct: 70 NTWYYVYLQQRSY-------ETPEQHTLTVNFNQQGTVES 102
>gi|90416963|ref|ZP_01224892.1| outer membrane lipoprotein OmlA [marine gamma proteobacterium
HTCC2207]
gi|90331310|gb|EAS46554.1| outer membrane lipoprotein OmlA [marine gamma proteobacterium
HTCC2207]
Length = 118
Score = 42.4 bits (98), Expect = 0.020, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 10/96 (10%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G +D I + G ++S V LG+P + N R FY + P S
Sbjct: 33 QGNIVDQEMIDKLLPGMTKSQVRFVLGTPLVADTFNQARWDYFY-----SRKAP----SG 83
Query: 100 KIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPH 135
K + V I F E + ++ + LP+ P P
Sbjct: 84 KETQEQV-TIFFDEDDKLERMTGDYLPSTAAEPEPK 118
>gi|71064841|ref|YP_263568.1| outer membrane lipoprotein OmlA [Psychrobacter arcticus 273-4]
gi|71037826|gb|AAZ18134.1| possible outer membrane lipoprotein OmlA [Psychrobacter arcticus
273-4]
Length = 138
Score = 42.4 bits (98), Expect = 0.022, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 41/126 (32%), Gaps = 7/126 (5%)
Query: 1 MKKILFLNNFFFGKLSFNKALFIIVIGLVVDYHVSYGSI------SGASLDMSAISLVSQ 54
M K L L F + I+ V S S+ G + + +
Sbjct: 6 MIKTLNLRPFHSASALRKIVITSILGVAVTMSGCSLLSVYKIDLPQGTPITQTQAQKLQV 65
Query: 55 GSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEK 114
G +++ V+ LGSP+ NR Y + K LK+ F
Sbjct: 66 GMNQNQVLYILGSPAIRDTLEPNRWDYIYDYQAGTEARRKGIADVKNASQH-LKVYFDNN 124
Query: 115 GVVSSV 120
G+V+ +
Sbjct: 125 GIVTGI 130
>gi|300724100|ref|YP_003713417.1| small membrane protein A [Xenorhabdus nematophila ATCC 19061]
gi|297630634|emb|CBJ91299.1| small membrane protein A [Xenorhabdus nematophila ATCC 19061]
Length = 113
Score = 42.0 bits (97), Expect = 0.025, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L +A+S + +G ++ V +LG+P + + SQ++YY+ +++
Sbjct: 34 QGNYLTQAAVSKIQKGMTQQQVTYTLGTPMLT---DPFGSQTWYYIFRQQPGH------- 83
Query: 100 KIMEYIVLKITFGEKGVVSSVSME 123
+ + L +TF G+++ + E
Sbjct: 84 EKVSQETLVLTFDNSGLLTDIKNE 107
>gi|315635129|ref|ZP_07890407.1| small protein A [Aggregatibacter segnis ATCC 33393]
gi|315476091|gb|EFU66845.1| small protein A [Aggregatibacter segnis ATCC 33393]
Length = 136
Score = 42.0 bits (97), Expect = 0.026, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 17 FNKALFIIVIGLVVDYHVSYGSI-------SGASLDMSAISLVSQGSSRSHVIESLGSPS 69
F L +++ L V S I G L ++ V G + V LG+P
Sbjct: 3 FKSVLTTLILALSVTACSSVNKIVYRIDVPQGNYLQAETVAQVKTGMTAQQVQYLLGTP- 61
Query: 70 FSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV 120
+L + +Q++YYV ++K + +P E L + F ++G+V++V
Sbjct: 62 --VLIDPYSNQTWYYVFLQQK----AYETP---EQHTLVVNFDQRGIVTNV 103
>gi|188533121|ref|YP_001906918.1| hypothetical protein ETA_09750 [Erwinia tasmaniensis Et1/99]
gi|188028163|emb|CAO96021.1| Small protein A [Erwinia tasmaniensis Et1/99]
Length = 115
Score = 41.6 bits (96), Expect = 0.032, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 45/113 (39%), Gaps = 18/113 (15%)
Query: 18 NKALFIIVIGLVVDYHVSY--------GSISGASLDMSAISLVSQGSSRSHVIESLGSPS 69
V+ L++ S G L + ++ + G ++ V +LG+P
Sbjct: 4 KTLTAAAVVLLMMTAGCSTLERVVYRPDINQGNYLVANDVAKIHTGMTQQQVAYTLGTP- 62
Query: 70 FSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSM 122
++H+ + +YYV +++ ++ L +TF + G ++++
Sbjct: 63 --MMHDPFGNNVWYYVFRQEPGHEA-------VKQQTLTLTFDKNGSLTNIDN 106
>gi|187479198|ref|YP_787223.1| outer membrane lipoprotein [Bordetella avium 197N]
gi|115423785|emb|CAJ50336.1| outer membrane lipoprotein [Bordetella avium 197N]
Length = 176
Score = 41.6 bits (96), Expect = 0.033, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 38/108 (35%), Gaps = 19/108 (17%)
Query: 19 KALFIIVIGLVVDYHVSYG---------SISGASLDMSAISLVSQGSSRSHVIESLGSPS 69
K L ++ S G G + ++L+ QG SR V +LGSP+
Sbjct: 11 KVLLGTLVLAAALAGCSSGKWGFPYRADMQQGNWITQEQVALLQQGMSREQVRFALGSPT 70
Query: 70 FSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVV 117
+ + + +R YY F + P E + F +V
Sbjct: 71 LTSVLHADRWDYPYY-------FKPGYGKP---EERKFTVFFENDRLV 108
>gi|157829035|ref|YP_001495277.1| hypothetical protein A1G_06580 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933759|ref|YP_001650548.1| SmpA/OmlA family lipoprotein [Rickettsia rickettsii str. Iowa]
gi|157801516|gb|ABV76769.1| hypothetical protein A1G_06580 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908846|gb|ABY73142.1| lipoprotein (SmpA/OmlA family) [Rickettsia rickettsii str. Iowa]
Length = 157
Score = 41.6 bits (96), Expect = 0.037, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 23 IIVIGLVVDYHVSYGSISGASLDMSAI-SLVSQGSSRSHVIESLGSPSFSILHNGNRSQS 81
++ G S+D SA+ L S+ +++ V+E +G+P+ ++ N +
Sbjct: 9 FSILAFFSLSGCKTIENRGQSIDDSALVKLESKKLNKTEVVELIGTPTIVPEYSQN---T 65
Query: 82 FYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV 120
+YYV + +L+PKI + ++KITF + V
Sbjct: 66 WYYVERVMSQR--AWLNPKIEKQKIVKITFDANNFMQEV 102
>gi|157964924|ref|YP_001499748.1| tmRNA-binding protein [Rickettsia massiliae MTU5]
gi|157844700|gb|ABV85201.1| tmRNA-binding protein [Rickettsia massiliae MTU5]
Length = 160
Score = 41.6 bits (96), Expect = 0.037, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 23 IIVIGLVVDYHVSYGSISGASLDMSAI-SLVSQGSSRSHVIESLGSPSFSILHNGNRSQS 81
++ G S+D SA+ L S+ +++ V+E +G+P+ ++ N +
Sbjct: 12 FSILAFFSLSGCKTIENRGQSIDDSALVKLESKKLNKTEVVELIGTPTMVPEYSQN---T 68
Query: 82 FYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV 120
+YYV + +L+PKI + ++KITF + V
Sbjct: 69 WYYVERVMSQR--AWLNPKIEKQKIVKITFDANNFMQEV 105
>gi|67459629|ref|YP_247253.1| hypothetical protein RF_1237 [Rickettsia felis URRWXCal2]
gi|67005162|gb|AAY62088.1| unknown [Rickettsia felis URRWXCal2]
Length = 157
Score = 41.6 bits (96), Expect = 0.038, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 23 IIVIGLVVDYHVSYGSISGASLDMSAI-SLVSQGSSRSHVIESLGSPSFSILHNGNRSQS 81
++ G S+D SA+ L S+ +++ V+E +G+P+ ++ N +
Sbjct: 9 FSILAFFSLSGCKTIENRGQSIDESALVKLESKKLNKTEVVELIGTPTMVPEYSQN---T 65
Query: 82 FYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV 120
+YYV + +L+PKI + ++KITF + V
Sbjct: 66 WYYVERVMSQR--AWLNPKIEKQKIVKITFDANNFMQEV 102
>gi|34581202|ref|ZP_00142682.1| hypothetical protein [Rickettsia sibirica 246]
gi|28262587|gb|EAA26091.1| unknown [Rickettsia sibirica 246]
Length = 157
Score = 41.6 bits (96), Expect = 0.038, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 23 IIVIGLVVDYHVSYGSISGASLDMSAI-SLVSQGSSRSHVIESLGSPSFSILHNGNRSQS 81
++ G S+D SA+ L S+ +++ V+E +G+P+ ++ N +
Sbjct: 9 FSILAFFSLSGCKTIENRGQSIDDSALVKLESKKLNKTEVVELIGTPTIVPEYSQN---T 65
Query: 82 FYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV 120
+YYV + +L+PKI + ++KITF + V
Sbjct: 66 WYYVERVMSQR--AWLNPKIEKQKIVKITFDANNFMQEV 102
>gi|15893127|ref|NP_360841.1| hypothetical protein RC1204 [Rickettsia conorii str. Malish 7]
gi|229587137|ref|YP_002845638.1| tmRNA-binding protein [Rickettsia africae ESF-5]
gi|15620334|gb|AAL03742.1| unknown [Rickettsia conorii str. Malish 7]
gi|228022187|gb|ACP53895.1| tmRNA-binding protein [Rickettsia africae ESF-5]
Length = 157
Score = 41.6 bits (96), Expect = 0.039, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 23 IIVIGLVVDYHVSYGSISGASLDMSAI-SLVSQGSSRSHVIESLGSPSFSILHNGNRSQS 81
++ G S+D SA+ L S+ +++ V+E +G+P+ ++ N +
Sbjct: 9 FSILAFFSLSGCKTIENRGQSIDDSALVKLESKKLNKTEVVELIGTPTIVPEYSQN---T 65
Query: 82 FYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV 120
+YYV + +L+PKI + ++KITF + V
Sbjct: 66 WYYVERVMSQR--AWLNPKIEKQKIVKITFDANNFMQEV 102
>gi|238650587|ref|YP_002916439.1| SmpA/OmlA family lipoprotein [Rickettsia peacockii str. Rustic]
gi|238624685|gb|ACR47391.1| SmpA/OmlA family lipoprotein [Rickettsia peacockii str. Rustic]
Length = 157
Score = 41.2 bits (95), Expect = 0.043, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 23 IIVIGLVVDYHVSYGSISGASLDMSAI-SLVSQGSSRSHVIESLGSPSFSILHNGNRSQS 81
++ G S+D SA+ L S+ +++ V+E +G+P+ ++ N +
Sbjct: 9 FSILAFFSLSGCKTIENRGQSIDDSALVKLESKKLNKTEVVELIGTPTIVPEYSQN---T 65
Query: 82 FYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV 120
+YYV + +L+PKI + ++KITF + V
Sbjct: 66 WYYVERVMSQR--AWLNPKIEKQKIVKITFDANNFMQEV 102
>gi|307249651|ref|ZP_07531637.1| hypothetical protein appser4_4610 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307258132|ref|ZP_07539882.1| hypothetical protein appser10_21100 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307260903|ref|ZP_07542589.1| hypothetical protein appser12_4740 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306858349|gb|EFM90419.1| hypothetical protein appser4_4610 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306863317|gb|EFM95250.1| hypothetical protein appser10_21100 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306869470|gb|EFN01261.1| hypothetical protein appser12_4740 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 114
Score = 41.2 bits (95), Expect = 0.043, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 15/113 (13%)
Query: 14 KLSFNKALFIIVIGLVVDYHVSYGSI-----SGASLDMSAISLVSQGSSRSHVIESLGSP 68
K+ A+ ++ IG+ V G L+ I V G ++ V LG+P
Sbjct: 2 KMKSLLAIALLAIGVTSCSTVKKVVYRIDVPQGNYLEQEKIDQVKVGMDKTQVQYLLGTP 61
Query: 69 SFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVS 121
N +R S+ Y+ ++ P+ L + F KG+VS+++
Sbjct: 62 MLKDTFNQDRW-SYVYIKREGYNDPI---------QHTLFVNFDSKGLVSNIT 104
>gi|237809005|ref|YP_002893445.1| SmpA/OmlA domain-containing protein [Tolumonas auensis DSM 9187]
gi|237501266|gb|ACQ93859.1| SmpA/OmlA domain protein [Tolumonas auensis DSM 9187]
Length = 133
Score = 41.2 bits (95), Expect = 0.043, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 29/69 (42%), Gaps = 7/69 (10%)
Query: 21 LFIIVIGLVVDYHVS----YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNG 76
+ ++ G+++ G ++ + + G +R VI +GSP + ++
Sbjct: 27 IAALLAGVMMSATTGCVYRIDVPQGNYVEQKQVDQLRVGMTREQVIYVMGSPMVTDQNDP 86
Query: 77 NRSQSFYYV 85
N +YY+
Sbjct: 87 N---VWYYI 92
>gi|319778401|ref|YP_004129314.1| Outer membrane lipoprotein SmpA [Taylorella equigenitalis MCE9]
gi|317108425|gb|ADU91171.1| Outer membrane lipoprotein SmpA [Taylorella equigenitalis MCE9]
Length = 141
Score = 40.9 bits (94), Expect = 0.053, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 18/100 (18%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G + + L+ +G ++ V+ +LG+P + NR Y F F S
Sbjct: 37 QGNWVTQEQLDLLQKGMTKEQVVFALGNPVSKDIFRTNRWDYRY-------SFKPGFGST 89
Query: 100 KIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIPA 139
I E L + F L + + +P PH+ PA
Sbjct: 90 TIRE---LSLWFDSNDR--------LTDWKADPLPHSQPA 118
>gi|240948792|ref|ZP_04753160.1| small protein A [Actinobacillus minor NM305]
gi|240296824|gb|EER47416.1| small protein A [Actinobacillus minor NM305]
Length = 117
Score = 40.9 bits (94), Expect = 0.057, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 18/110 (16%)
Query: 19 KALFIIVIGLVVDYHVSYGSI--------SGASLDMSAISLVSQGSSRSHVIESLGSPSF 70
K+L +++ + S G L+ I V G ++ V LG+P
Sbjct: 4 KSLLAVMLLALGVTGCSTVKKVVYRIDVPQGNYLEQDKIDQVKVGMNKEQVQYLLGTPVL 63
Query: 71 SILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV 120
+ NR + ++ ++ P+ L + F EKG+VS +
Sbjct: 64 RDMFAQNRWD-YVFIKREGYNDPI---------QHTLLVYFNEKGLVSDI 103
>gi|71906574|ref|YP_284161.1| SmpA/OmlA [Dechloromonas aromatica RCB]
gi|71846195|gb|AAZ45691.1| SmpA/OmlA [Dechloromonas aromatica RCB]
Length = 160
Score = 40.9 bits (94), Expect = 0.057, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 43/131 (32%), Gaps = 26/131 (19%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L +S + G ++ V LG+P + + + R Y +
Sbjct: 35 QGNVLSQEMVSQLKPGQTKDQVRFLLGTPLVADIFHQQRWDYVY---------RYQNGQT 85
Query: 100 KIMEYIVLKITFGEKGVVSS----------------VSMERLPN-RRFNPNPHTIPAPIQ 142
++E + F +G + V+ RL + + P P +
Sbjct: 86 GVVESRKFAVFFDTEGRLERVDGDVAVADTSELTTPVAKSRLVDLGTLSGEAADKPLPPR 145
Query: 143 TADGFLRRLLN 153
GF RR++N
Sbjct: 146 EEPGFFRRVMN 156
>gi|294668438|ref|ZP_06733538.1| hypothetical protein NEIELOOT_00353 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291309591|gb|EFE50834.1| hypothetical protein NEIELOOT_00353 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 123
Score = 40.9 bits (94), Expect = 0.058, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 31/84 (36%), Gaps = 8/84 (9%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLS 98
I G LD A+S + QG SR V LG+P + +R Y +S+
Sbjct: 34 IQGNQLDARAVSSLQQGMSRDQVQLLLGTPLLRDPFHSDRWDYTYEISRNGVVNQA---- 89
Query: 99 PKIMEYIVLKITFGEKGVVSSVSM 122
E L + F +V +
Sbjct: 90 ----ETRNLTVWFENDRLVKAEGN 109
>gi|255066151|ref|ZP_05318006.1| lipoprotein, SmpA/OmlA family [Neisseria sicca ATCC 29256]
gi|255049696|gb|EET45160.1| lipoprotein, SmpA/OmlA family [Neisseria sicca ATCC 29256]
Length = 127
Score = 40.9 bits (94), Expect = 0.061, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 36/112 (32%), Gaps = 21/112 (18%)
Query: 17 FNKALFIIVIGLVVDYHVSY-----------GSISGASLDMSAISLVSQGSSRSHVIESL 65
NK L + + L+ S I G LD A+ + G SR V L
Sbjct: 1 MNKPLCLALAALIGLSACSAERVSLFPSYKLKVIQGNELDPRAVVSLQAGMSRDQVQLLL 60
Query: 66 GSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVV 117
G+P + +R + S+ I + L + F +V
Sbjct: 61 GTPLLRDAFHADRWDYTFNTSRNGI----------IKDRSNLTVYFENDVLV 102
>gi|261364788|ref|ZP_05977671.1| lipoprotein, SmpA/OmlA family [Neisseria mucosa ATCC 25996]
gi|288566810|gb|EFC88370.1| lipoprotein, SmpA/OmlA family [Neisseria mucosa ATCC 25996]
Length = 127
Score = 40.9 bits (94), Expect = 0.061, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 36/112 (32%), Gaps = 21/112 (18%)
Query: 17 FNKALFIIVIGLVVDYHVSY-----------GSISGASLDMSAISLVSQGSSRSHVIESL 65
NK L + + LV S I G LD A+ + G SR V L
Sbjct: 1 MNKTLCLALAALVGLSACSAERVSLFPSYKLKVIQGNELDPRAVVSLQAGMSRDQVQLLL 60
Query: 66 GSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVV 117
G+P + +R + S+ I + L + F +V
Sbjct: 61 GTPLLRDAFHADRWDYTFNTSRNGI----------IKDRSNLTVYFENDVLV 102
>gi|126207912|ref|YP_001053137.1| small protein A [Actinobacillus pleuropneumoniae L20]
gi|165975887|ref|YP_001651480.1| small protein A [Actinobacillus pleuropneumoniae serovar 3 str.
JL03]
gi|190149721|ref|YP_001968246.1| small protein A [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|303249791|ref|ZP_07335995.1| small protein A [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|303252671|ref|ZP_07338834.1| small protein A [Actinobacillus pleuropneumoniae serovar 2 str.
4226]
gi|307245260|ref|ZP_07527351.1| hypothetical protein appser1_4680 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307247432|ref|ZP_07529478.1| hypothetical protein appser2_4270 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307251980|ref|ZP_07533881.1| hypothetical protein appser6_5000 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307254207|ref|ZP_07536052.1| hypothetical protein appser9_4600 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258672|ref|ZP_07540407.1| hypothetical protein appser11_4730 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|307263030|ref|ZP_07544652.1| hypothetical protein appser13_4530 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|126096704|gb|ABN73532.1| small protein A [Actinobacillus pleuropneumoniae serovar 5b str.
L20]
gi|165875988|gb|ABY69036.1| small protein A [Actinobacillus pleuropneumoniae serovar 3 str.
JL03]
gi|189914852|gb|ACE61104.1| small protein A [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|302648639|gb|EFL78832.1| small protein A [Actinobacillus pleuropneumoniae serovar 2 str.
4226]
gi|302651358|gb|EFL81510.1| small protein A [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|306853904|gb|EFM86118.1| hypothetical protein appser1_4680 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306856048|gb|EFM88205.1| hypothetical protein appser2_4270 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306860672|gb|EFM92684.1| hypothetical protein appser6_5000 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306862907|gb|EFM94856.1| hypothetical protein appser9_4600 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867329|gb|EFM99182.1| hypothetical protein appser11_4730 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306871656|gb|EFN03378.1| hypothetical protein appser13_4530 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 114
Score = 40.9 bits (94), Expect = 0.062, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 15/113 (13%)
Query: 14 KLSFNKALFIIVIGLVVDYHVSYGSI-----SGASLDMSAISLVSQGSSRSHVIESLGSP 68
K+ A+ ++ +G+ V G L+ I V G ++ V LG+P
Sbjct: 2 KMKSLLAIALLAVGVTSCSTVKKVVYRIDVPQGNYLEQEKIDQVKVGMDKTQVQYLLGTP 61
Query: 69 SFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVS 121
N +R S+ Y+ ++ P+ L + F KG+VS+++
Sbjct: 62 MLKDTFNQDRW-SYVYIKREGYNDPI---------QHTLFVNFDSKGLVSNIT 104
>gi|260771335|ref|ZP_05880261.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio furnissii CIP 102972]
gi|260613651|gb|EEX38844.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio furnissii CIP 102972]
gi|315180935|gb|ADT87849.1| Small protein A [Vibrio furnissii NCTC 11218]
Length = 104
Score = 40.9 bits (94), Expect = 0.063, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 30/91 (32%), Gaps = 10/91 (10%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G ++ A+ + G S+ V LGSP ++YY+
Sbjct: 19 QGNYIEQQAVDQLKFGMSKEQVRFVLGSPMLV---ENGYPDTWYYIYHHTAGHEASI--- 72
Query: 100 KIMEYIVLKITFGEKGVVSSVSMERLPNRRF 130
L + F G + +++ + + F
Sbjct: 73 ----QKNLVVNFNNGGTLVNIAGDFQQSDNF 99
>gi|258620033|ref|ZP_05715073.1| small protein A [Vibrio mimicus VM573]
gi|258625220|ref|ZP_05720133.1| small protein A [Vibrio mimicus VM603]
gi|258582510|gb|EEW07346.1| small protein A [Vibrio mimicus VM603]
gi|258587766|gb|EEW12475.1| small protein A [Vibrio mimicus VM573]
Length = 119
Score = 40.9 bits (94), Expect = 0.063, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 36/117 (30%), Gaps = 17/117 (14%)
Query: 10 FFFGKLSFNKALFIIVIGLVVDYHV---SYGSISGASLDMSAISLVSQGSSRSHVIESLG 66
F K L I + G +D ++ + G S+ V LG
Sbjct: 1 MQFTKWFIALPLAITALSGCSLLERLVYRIDINQGNYVDQQSVDQLKFGMSKEQVRFVLG 60
Query: 67 SPSFSILHNGNRSQSFYYVSQKKK--WFPVKFLSPKIMEYIVLKITFGEKGVVSSVS 121
SP ++YY+ + PV L + F + G + +V+
Sbjct: 61 SPMLV---ENGYPDTWYYIYHHTQGHNDPV---------QKNLIVKFNDGGKLVNVA 105
>gi|255319904|ref|ZP_05361105.1| outer membrane lipoprotein [Acinetobacter radioresistens SK82]
gi|262379201|ref|ZP_06072357.1| outer membrane lipoprotein [Acinetobacter radioresistens SH164]
gi|255303037|gb|EET82253.1| outer membrane lipoprotein [Acinetobacter radioresistens SK82]
gi|262298658|gb|EEY86571.1| outer membrane lipoprotein [Acinetobacter radioresistens SH164]
Length = 132
Score = 40.9 bits (94), Expect = 0.064, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 36/107 (33%), Gaps = 11/107 (10%)
Query: 21 LFIIVIGLVVDYHVSYGSI------SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILH 74
L + ++ + S + G L + S V G S V LGSP+ +
Sbjct: 4 LMLTLVVTSLLVGCSTLGVYKVDIPQGTPLTQAQASKVQVGMSHQQVRFLLGSPTVTDPL 63
Query: 75 NGNRSQSFY-YVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV 120
N R Y Y+ LKI F E G+V+ +
Sbjct: 64 NPLRWDYIYNYIPGTYAKKA----KIPAAHGQHLKIYFNETGIVTKI 106
>gi|223041912|ref|ZP_03612097.1| small protein A [Actinobacillus minor 202]
gi|223017266|gb|EEF15693.1| small protein A [Actinobacillus minor 202]
Length = 117
Score = 40.5 bits (93), Expect = 0.070, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 41/110 (37%), Gaps = 18/110 (16%)
Query: 19 KALFIIVIGLVVDYHVSYGSI--------SGASLDMSAISLVSQGSSRSHVIESLGSPSF 70
K+L +++ + S G L+ + V G ++ V LG+P
Sbjct: 4 KSLLAVMLLALGVTGCSTVKKVVYRIDVPQGNYLEQDKVDQVKVGMNKEQVQYLLGTPVL 63
Query: 71 SILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV 120
+ NR + ++ ++ P+ L + F EKG+VS +
Sbjct: 64 RDMFAQNRWD-YVFIKREGYNDPI---------QHTLLVYFNEKGLVSDI 103
>gi|113460373|ref|YP_718435.1| small protein A [Haemophilus somnus 129PT]
gi|112822416|gb|ABI24505.1| conserved small protein A [Haemophilus somnus 129PT]
Length = 128
Score = 40.5 bits (93), Expect = 0.072, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 18/125 (14%)
Query: 24 IVIGLVVDYHVSYGSI-------SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNG 76
+++GL V S I G L+ +A+ V G + V LG+P +L +
Sbjct: 1 MILGLSVTACSSVQKIVYRIDVPQGNYLESAAVEQVKVGMNAQQVQYLLGTP---MLIDP 57
Query: 77 NRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVS-MERLPNRRFNPNPH 135
+Q++YYV ++K + E + F +G+V+ V+ + LP+ +
Sbjct: 58 FSNQTWYYVFLQQKSYNAP-------EQHTFIVNFDRRGIVTDVNLDKPLPDVEKEYINN 110
Query: 136 TIPAP 140
TI
Sbjct: 111 TIIQG 115
>gi|170719134|ref|YP_001783450.1| SmpA/OmlA domain-containing protein [Haemophilus somnus 2336]
gi|168827263|gb|ACA32634.1| SmpA/OmlA domain protein [Haemophilus somnus 2336]
Length = 137
Score = 40.5 bits (93), Expect = 0.080, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 54/132 (40%), Gaps = 18/132 (13%)
Query: 17 FNKALFIIVIGLVVDYHVSYGSI-------SGASLDMSAISLVSQGSSRSHVIESLGSPS 69
+ +++GL V S I G L+ +A+ V G + V LG+P
Sbjct: 3 LKFIIPAMILGLSVTACSSVQKIVYRIDVPQGNYLESTAVEQVKVGMNAQQVQYLLGTP- 61
Query: 70 FSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVS-MERLPNR 128
+L + +Q++YYV ++K + E + F +G+V+ V+ + LP+
Sbjct: 62 --MLIDPFSNQTWYYVFLQQKSYNAP-------EQHTFIVNFDRRGIVTDVNLDKPLPDV 112
Query: 129 RFNPNPHTIPAP 140
+TI
Sbjct: 113 EKEYINNTIIQG 124
>gi|71282587|ref|YP_270489.1| SmpA/OmlA family protein [Colwellia psychrerythraea 34H]
gi|71148327|gb|AAZ28800.1| SmpA/OmlA family protein [Colwellia psychrerythraea 34H]
Length = 144
Score = 40.5 bits (93), Expect = 0.082, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 39/109 (35%), Gaps = 10/109 (9%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
+ + + + Y G L+ +I + G ++ V LGSP N +
Sbjct: 8 VITALTLSACSSWVFRYDVPQGNYLEQKSIDKLQVGMTKEQVKFILGSPVVVDAFN---N 64
Query: 80 QSFYYVSQKKKWFPVKF-LSPKIMEYIVLKITFGEKGVVSSVSMERLPN 127
++ YV + K F + + + I F +VS+ + +
Sbjct: 65 DTWNYVYKLKSGRSKDFDMKKQFI------INFSNDKLVSASGDFEVSD 107
>gi|239787350|emb|CAX83827.1| TmRNA-binding small protein A [uncultured bacterium]
Length = 130
Score = 40.5 bits (93), Expect = 0.085, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 49/122 (40%), Gaps = 6/122 (4%)
Query: 24 IVIGLVVDYHVSYGSISGASLDMSAISLVSQGS-SRSHVIESLGSPSFSILHNGNRSQSF 82
+ I L+ + G + G +R V++ LG+P+ + + + + +
Sbjct: 1 MAISLLFTTCAKEENAYGWEDLEQHCKKIIVGKMNRDEVMKLLGTPTAA---DISLLKEW 57
Query: 83 YYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIPAPIQ 142
YYV ++ F + PK+ + +++I F +KG+V S ++E +
Sbjct: 58 YYVQLIEEGFSIA--KPKVKTHKMMRIVFNDKGLVKSATIENIKKSEKKIVTDKTKTVGY 115
Query: 143 TA 144
Sbjct: 116 QE 117
>gi|262402797|ref|ZP_06079358.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio sp. RC586]
gi|262351579|gb|EEZ00712.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio sp. RC586]
Length = 119
Score = 40.1 bits (92), Expect = 0.098, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 36/117 (30%), Gaps = 17/117 (14%)
Query: 10 FFFGKLSFNKALFIIVIGLVVDYHV---SYGSISGASLDMSAISLVSQGSSRSHVIESLG 66
F K L + + G +D ++ + G S+ V LG
Sbjct: 1 MQFTKWFIALPLAVTALSGCSLLERLVYRIDINQGNYVDQQSVDQLKFGMSKEQVRFVLG 60
Query: 67 SPSFSILHNGNRSQSFYYVSQKKK--WFPVKFLSPKIMEYIVLKITFGEKGVVSSVS 121
SP ++YY+ + PV L + F + G + +V+
Sbjct: 61 SPMLV---ENGYPDTWYYIYHHTQGHNDPV---------QKNLIVKFNDGGKLVNVA 105
>gi|167854649|ref|ZP_02477429.1| amidophosphoribosyltransferase [Haemophilus parasuis 29755]
gi|219870924|ref|YP_002475299.1| SmpA/OmlA domain-containing protein [Haemophilus parasuis SH0165]
gi|167854186|gb|EDS25420.1| amidophosphoribosyltransferase [Haemophilus parasuis 29755]
gi|219691128|gb|ACL32351.1| SmpA/OmlA domain-containing protein [Haemophilus parasuis SH0165]
Length = 111
Score = 40.1 bits (92), Expect = 0.10, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 33/82 (40%), Gaps = 10/82 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L+ I + G ++ V LG+P +R + ++ +K P+
Sbjct: 33 QGNYLEQEKIDQLQVGMNKEQVQYLLGTPMLRDSFAQDRWD-YVFILRKGYEAPI----- 86
Query: 100 KIMEYIVLKITFGEKGVVSSVS 121
+ + F KG+VS+++
Sbjct: 87 ----QRTIFVYFDNKGLVSNIA 104
>gi|254361732|ref|ZP_04977868.1| SmpA family lipoprotein [Mannheimia haemolytica PHL213]
gi|261492003|ref|ZP_05988578.1| SmpA family lipoprotein [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261494585|ref|ZP_05991067.1| SmpA family lipoprotein [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|153093258|gb|EDN74264.1| SmpA family lipoprotein [Mannheimia haemolytica PHL213]
gi|261309776|gb|EEY10997.1| SmpA family lipoprotein [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261312286|gb|EEY13414.1| SmpA family lipoprotein [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 113
Score = 40.1 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 10/81 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L+ I+ + G + V LG+P + +R YV K++ +
Sbjct: 33 QGNYLEQDKIAQLKVGMTAEQVEYLLGTPMLKNIFETHRWD---YVFIKREGY------- 82
Query: 100 KIMEYIVLKITFGEKGVVSSV 120
K E L I F KG+VS +
Sbjct: 83 KDPEQRNLFIYFDAKGLVSKI 103
>gi|167817421|ref|ZP_02449101.1| outer membrane lipoprotein, putatitve [Burkholderia pseudomallei
91]
Length = 160
Score = 40.1 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 9/81 (11%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + S + G SR V LG+P + + + +R +Y +
Sbjct: 26 ITVVQGNFVSQEKASQLQVGMSREQVRALLGTPLLTDMFHADRWDYLFYFKRG------- 78
Query: 96 FLSPKIMEYIVLKITFGEKGV 116
S +++ L + F +
Sbjct: 79 --STSVVQQRDLVVNFAGDRL 97
>gi|329297611|ref|ZP_08254947.1| outer membrane biogenesis protein BamE [Plautia stali symbiont]
Length = 115
Score = 40.1 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 40/83 (48%), Gaps = 10/83 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + +S + G ++ V +LG+P ++H+ S +YYV +++ L
Sbjct: 34 QGNYLVANDVSKIHTGMTQQQVAYTLGTP---MMHDPFGSNVWYYVFRQE-------LGH 83
Query: 100 KIMEYIVLKITFGEKGVVSSVSM 122
+ ++ L +TF G ++++
Sbjct: 84 ESVKQQTLTLTFDSNGTLTNIDN 106
>gi|330830438|ref|YP_004393390.1| Small protein A [Aeromonas veronii B565]
gi|328805574|gb|AEB50773.1| Small protein A [Aeromonas veronii B565]
Length = 112
Score = 39.7 bits (91), Expect = 0.12, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 40/117 (34%), Gaps = 12/117 (10%)
Query: 10 FFFGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPS 69
L + + G + Y + G ++ + + QG +R V LG+P
Sbjct: 1 MRMKHLIAAALTALTLSGCSLVYRIDIP--QGNYVEQKQVDKLRQGMTREQVSYVLGTPM 58
Query: 70 FSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLP 126
+ N ++YY+ ++ P E L +TF + + LP
Sbjct: 59 LRDGFDPN---TWYYL---YEFQPGHGDK----ERKELTVTFANDRLTTVTGDFPLP 105
>gi|157826226|ref|YP_001493946.1| hypothetical protein A1C_06025 [Rickettsia akari str. Hartford]
gi|157800184|gb|ABV75438.1| hypothetical protein A1C_06025 [Rickettsia akari str. Hartford]
Length = 157
Score = 39.7 bits (91), Expect = 0.12, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Query: 23 IIVIGLVVDYHVSYGSISGASLDMSAI-SLVSQGSSRSHVIESLGSPSFSILHNGNRSQS 81
++ G S+D A+ L S+ +++ V+E +G+P+ ++ N +
Sbjct: 9 FSILAFFSLSGCKTIENRGQSIDDVALVKLESKKLNKTEVVELIGTPTMVPEYSQN---T 65
Query: 82 FYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV 120
+YYV + +L+PKI + ++KI F + V
Sbjct: 66 WYYVERVMSQR--AWLNPKIEKQKIVKIKFDANNFIQEV 102
>gi|319943262|ref|ZP_08017545.1| ATP-dependent hsl protease ATP-binding subunit HslU [Lautropia
mirabilis ATCC 51599]
gi|319743804|gb|EFV96208.1| ATP-dependent hsl protease ATP-binding subunit HslU [Lautropia
mirabilis ATCC 51599]
Length = 140
Score = 39.7 bits (91), Expect = 0.12, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 12/99 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G ++ + V G + V +G+P + + + NR + YV +F P
Sbjct: 43 QGNYINQQMLDEVHTGMAPDEVRLRIGTPLLADVFHPNRWE---YV--------FRFQYP 91
Query: 100 KIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIP 138
+ F G VS + +RLP R +PN +P
Sbjct: 92 NGDSELRRVTVFFADGRVSDIKHDRLPERD-DPNDPALP 129
>gi|76809279|ref|YP_334827.1| outer membrane lipoprotein [Burkholderia pseudomallei 1710b]
gi|134280590|ref|ZP_01767301.1| lipoprotein, SmpA/OmlA family [Burkholderia pseudomallei 305]
gi|217421161|ref|ZP_03452666.1| lipoprotein, SmpA/OmlA family [Burkholderia pseudomallei 576]
gi|226196802|ref|ZP_03792381.1| lipoprotein, SmpA/OmlA family [Burkholderia pseudomallei Pakistan
9]
gi|254299275|ref|ZP_04966725.1| lipoprotein, SmpA/OmlA family [Burkholderia pseudomallei 406e]
gi|76578732|gb|ABA48207.1| outer membrane lipoprotein, putatitve [Burkholderia pseudomallei
1710b]
gi|134248597|gb|EBA48680.1| lipoprotein, SmpA/OmlA family [Burkholderia pseudomallei 305]
gi|157808744|gb|EDO85914.1| lipoprotein, SmpA/OmlA family [Burkholderia pseudomallei 406e]
gi|217396573|gb|EEC36590.1| lipoprotein, SmpA/OmlA family [Burkholderia pseudomallei 576]
gi|225931062|gb|EEH27070.1| lipoprotein, SmpA/OmlA family [Burkholderia pseudomallei Pakistan
9]
Length = 251
Score = 39.7 bits (91), Expect = 0.12, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 9/81 (11%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + S + G SR V LG+P + + + +R +Y +
Sbjct: 26 ITVVQGNFVSQEKASQLQVGMSREQVRALLGTPLLTDMFHADRWDYLFYFKRG------- 78
Query: 96 FLSPKIMEYIVLKITFGEKGV 116
S +++ L + F +
Sbjct: 79 --STSVVQQRDLVVNFAGDRL 97
>gi|237813821|ref|YP_002898272.1| lipoprotein, SmpA/OmlA family [Burkholderia pseudomallei MSHR346]
gi|237503162|gb|ACQ95480.1| lipoprotein, SmpA/OmlA family [Burkholderia pseudomallei MSHR346]
Length = 253
Score = 39.7 bits (91), Expect = 0.12, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 9/81 (11%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + S + G SR V LG+P + + + +R +Y +
Sbjct: 26 ITVVQGNFVSQEKASQLQVGMSREQVRALLGTPLLTDMFHADRWDYLFYFKRG------- 78
Query: 96 FLSPKIMEYIVLKITFGEKGV 116
S +++ L + F +
Sbjct: 79 --STSVVQQRDLVVNFAGDRL 97
>gi|332993781|gb|AEF03836.1| SmpA/OmlA [Alteromonas sp. SN2]
Length = 118
Score = 39.7 bits (91), Expect = 0.12, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 10/100 (10%)
Query: 22 FIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQS 81
F + ++ G LD +S + G ++ VI LG+P + + +
Sbjct: 12 FTLTSSACSNWIYRIDVPQGNFLDQRDVSKLRIGMTKEQVIYVLGNPVVQDSFDDD---T 68
Query: 82 FYYVSQKKKWFPVKFLSPKIME-YIVLKITFGEKGVVSSV 120
+YYV K+ + + + + ITF E G V+SV
Sbjct: 69 WYYVYDMKRG-----MKKRGEDFQKQMVITF-EDGKVTSV 102
>gi|167847311|ref|ZP_02472819.1| outer membrane lipoprotein, putatitve [Burkholderia pseudomallei
B7210]
Length = 194
Score = 39.7 bits (91), Expect = 0.12, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 9/81 (11%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + S + G SR V LG+P + + + +R +Y +
Sbjct: 26 ITVVQGNFVSQEKASQLQVGMSREQVRALLGTPLLTDMFHADRWDYLFYFKRG------- 78
Query: 96 FLSPKIMEYIVLKITFGEKGV 116
S +++ L + F +
Sbjct: 79 --STSVVQQRDLVVNFAGDRL 97
>gi|167721233|ref|ZP_02404469.1| outer membrane lipoprotein, putatitve [Burkholderia pseudomallei
DM98]
Length = 133
Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 9/81 (11%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + S + G SR V LG+P + + + +R +Y +
Sbjct: 26 ITVVQGNFVSQEKASQLQVGMSREQVRALLGTPLLTDMFHADRWDYLFYFKRG------- 78
Query: 96 FLSPKIMEYIVLKITFGEKGV 116
S +++ L + F +
Sbjct: 79 --STSVVQQRDLVVNFAGDRL 97
>gi|221134959|ref|ZP_03561262.1| SmpA/OmlA [Glaciecola sp. HTCC2999]
Length = 117
Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 41/106 (38%), Gaps = 9/106 (8%)
Query: 21 LFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQ 80
+ +I I ++ G LD + + ++ V LG P + + N
Sbjct: 11 VAMISISGCSNWIFRIDIPQGNYLDDRDVQKLRIEMTKEQVEFVLGKPIITDSFDPN--- 67
Query: 81 SFYYVSQKKKWFPVKFLSPKIME-YIVLKITFGEKGVVSSVSMERL 125
++YYV + K+ ++ + + L ITF + +VS L
Sbjct: 68 TWYYVYEMKRG-----MTTRGEDFRKELVITFTDNKLVSVEGDFEL 108
>gi|212710682|ref|ZP_03318810.1| hypothetical protein PROVALCAL_01748 [Providencia alcalifaciens DSM
30120]
gi|212686763|gb|EEB46291.1| hypothetical protein PROVALCAL_01748 [Providencia alcalifaciens DSM
30120]
Length = 130
Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 14 KLSFNKALFIIVIGL---VVDYHVSYGSIS-GASLDMSAISLVSQGSSRSHVIESLGSPS 69
KL AL ++ +++ V + I+ G L +S + G ++ V +LG+P
Sbjct: 4 KLLTAAALSFALMSTGCSMMERLVYHPDINQGNYLTAKDVSKIKNGMTQQQVAYALGTPM 63
Query: 70 FSILHNGNRSQSFYYV-SQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSME 123
+ + SQ+++YV Q+ PVK L +TF G+++ + E
Sbjct: 64 MT---DPFGSQTWFYVFRQELGHDPVK--------QETLTLTFDRNGILTDIKNE 107
>gi|167912546|ref|ZP_02499637.1| outer membrane lipoprotein, putatitve [Burkholderia pseudomallei
112]
Length = 170
Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 9/81 (11%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + S + G SR V LG+P + + + +R +Y +
Sbjct: 36 ITVVQGNFVSQEKASQLQVGMSREQVRALLGTPLLTDMFHADRWDYLFYFKRG------- 88
Query: 96 FLSPKIMEYIVLKITFGEKGV 116
S +++ L + F +
Sbjct: 89 --STSVVQQRDLVVNFAGDRL 107
>gi|254180639|ref|ZP_04887237.1| lipoprotein, SmpA/OmlA family [Burkholderia pseudomallei 1655]
gi|254261563|ref|ZP_04952617.1| lipoprotein, SmpA/OmlA family [Burkholderia pseudomallei 1710a]
gi|184211178|gb|EDU08221.1| lipoprotein, SmpA/OmlA family [Burkholderia pseudomallei 1655]
gi|254220252|gb|EET09636.1| lipoprotein, SmpA/OmlA family [Burkholderia pseudomallei 1710a]
Length = 261
Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 9/81 (11%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + S + G SR V LG+P + + + +R +Y +
Sbjct: 36 ITVVQGNFVSQEKASQLQVGMSREQVRALLGTPLLTDMFHADRWDYLFYFKRG------- 88
Query: 96 FLSPKIMEYIVLKITFGEKGV 116
S +++ L + F +
Sbjct: 89 --STSVVQQRDLVVNFAGDRL 107
>gi|254178936|ref|ZP_04885590.1| lipoprotein, SmpA/OmlA family [Burkholderia mallei ATCC 10399]
gi|160694850|gb|EDP84858.1| lipoprotein, SmpA/OmlA family [Burkholderia mallei ATCC 10399]
Length = 263
Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 9/81 (11%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + S + G SR V LG+P + + + +R +Y +
Sbjct: 36 ITVVQGNFVSQEKASQLQVGMSREQVRALLGTPLLTDMFHADRWDYLFYFKRG------- 88
Query: 96 FLSPKIMEYIVLKITFGEKGV 116
S +++ L + F +
Sbjct: 89 --STSVVQQRDLVVNFAGDRL 107
>gi|126442167|ref|YP_001060430.1| SmpA/OmlA family lipoprotein [Burkholderia pseudomallei 668]
gi|126449539|ref|YP_001082169.1| SmpA/OmlA family lipoprotein [Burkholderia mallei NCTC 10247]
gi|126452542|ref|YP_001067691.1| SmpA/OmlA family lipoprotein [Burkholderia pseudomallei 1106a]
gi|254199052|ref|ZP_04905467.1| lipoprotein, SmpA/OmlA family [Burkholderia pseudomallei S13]
gi|126221660|gb|ABN85166.1| lipoprotein, SmpA/OmlA family [Burkholderia pseudomallei 668]
gi|126226184|gb|ABN89724.1| lipoprotein, SmpA/OmlA family [Burkholderia pseudomallei 1106a]
gi|126242409|gb|ABO05502.1| lipoprotein, SmpA/OmlA family [Burkholderia mallei NCTC 10247]
gi|169656882|gb|EDS88279.1| lipoprotein, SmpA/OmlA family [Burkholderia pseudomallei S13]
Length = 263
Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 9/81 (11%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + S + G SR V LG+P + + + +R +Y +
Sbjct: 36 ITVVQGNFVSQEKASQLQVGMSREQVRALLGTPLLTDMFHADRWDYLFYFKRG------- 88
Query: 96 FLSPKIMEYIVLKITFGEKGV 116
S +++ L + F +
Sbjct: 89 --STSVVQQRDLVVNFAGDRL 107
>gi|167825827|ref|ZP_02457298.1| outer membrane lipoprotein, putatitve [Burkholderia pseudomallei 9]
Length = 142
Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 9/81 (11%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + S + G SR V LG+P + + + +R +Y +
Sbjct: 14 ITVVQGNFVSQEKASQLQVGMSREQVRALLGTPLLTDMFHADRWDYLFYFKRG------- 66
Query: 96 FLSPKIMEYIVLKITFGEKGV 116
S +++ L + F +
Sbjct: 67 --STSVVQQRDLVVNFAGDRL 85
>gi|254483123|ref|ZP_05096357.1| SmpA / OmlA family protein [marine gamma proteobacterium HTCC2148]
gi|214036645|gb|EEB77318.1| SmpA / OmlA family protein [marine gamma proteobacterium HTCC2148]
Length = 166
Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 17/113 (15%), Positives = 32/113 (28%), Gaps = 18/113 (15%)
Query: 19 KALFIIVIGLVVDYHVSYGSISGASLD--------MSAISLVSQGSSRSHVIESLGSPSF 70
+ L I + + G +D + G SR V LG+P
Sbjct: 2 RILLIAFAITCISACTAVGFPGVYRIDVEQGNIVTQELADQLQPGMSRRQVRFILGTPMV 61
Query: 71 SILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSME 123
N +R Y + + +++ L + F + S +
Sbjct: 62 EDSFNRDRWDYIY-----TRRNGL-----EVLAEDRLTVFFEADSLTSVIGDY 104
>gi|183599796|ref|ZP_02961289.1| hypothetical protein PROSTU_03304 [Providencia stuartii ATCC 25827]
gi|188022060|gb|EDU60100.1| hypothetical protein PROSTU_03304 [Providencia stuartii ATCC 25827]
Length = 159
Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 39/85 (45%), Gaps = 12/85 (14%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYV-SQKKKWFPVKFLS 98
G L ++ + +G ++ V +LG+P + + +Q++YYV Q+ PVK
Sbjct: 34 QGNYLTAKDVAKIQKGMTQQQVAYTLGTPMLT---DPFGTQTWYYVFRQELGHDPVK--- 87
Query: 99 PKIMEYIVLKITFGEKGVVSSVSME 123
L ++F G+++ + E
Sbjct: 88 -----QQTLTLSFDRNGILTDIKNE 107
>gi|73542521|ref|YP_297041.1| SmpA/OmlA [Ralstonia eutropha JMP134]
gi|72119934|gb|AAZ62197.1| SmpA/OmlA [Ralstonia eutropha JMP134]
Length = 207
Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 31/80 (38%), Gaps = 9/80 (11%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLS 98
+ G + A S + +G +R V LG+P + + + +R YV ++
Sbjct: 49 VQGNFVSREAASQLHEGMTRDQVKFLLGTPLLTDVFHADRWD---YVFSFRRGNAA---- 101
Query: 99 PKIMEYIVLKITFGEKGVVS 118
I++ + F +V
Sbjct: 102 --IVQQRRFTVYFDGDKLVK 119
>gi|160872148|ref|ZP_02062280.1| lipoprotein, SmpA/OmlA family [Rickettsiella grylli]
gi|159120947|gb|EDP46285.1| lipoprotein, SmpA/OmlA family [Rickettsiella grylli]
Length = 102
Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 24/75 (32%), Gaps = 7/75 (9%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVS-------QKKKWF 92
G L S I + G +R V LGS NR YYV Q++
Sbjct: 27 QGNILQQSTIDQLHLGMTREQVYYLLGSCILESPFQANRKDYIYYVQPGHGEPIQRRITL 86
Query: 93 PVKFLSPKIMEYIVL 107
+ ++ L
Sbjct: 87 IFSNNRLQHIDQSAL 101
>gi|167895899|ref|ZP_02483301.1| outer membrane lipoprotein, putatitve [Burkholderia pseudomallei
7894]
Length = 137
Score = 39.3 bits (90), Expect = 0.15, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 9/81 (11%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + S + G SR V LG+P + + + +R +Y +
Sbjct: 14 ITVVQGNFVSQEKASQLQVGMSREQVRALLGTPLLTDMFHADRWDYLFYFKRG------- 66
Query: 96 FLSPKIMEYIVLKITFGEKGV 116
S +++ L + F +
Sbjct: 67 --STSVVQQRDLVVNFAGDRL 85
>gi|167904285|ref|ZP_02491490.1| outer membrane lipoprotein, putatitve [Burkholderia pseudomallei
NCTC 13177]
Length = 134
Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 9/81 (11%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + S + G SR V LG+P + + + +R +Y +
Sbjct: 14 ITVVQGNFVSQEKASQLQVGMSREQVRALLGTPLLTDMFHADRWDYLFYFKRG------- 66
Query: 96 FLSPKIMEYIVLKITFGEKGV 116
S +++ L + F +
Sbjct: 67 --STSVVQQRDLVVNFAGDRL 85
>gi|124384054|ref|YP_001027217.1| SmpA/OmlA family lipoprotein [Burkholderia mallei NCTC 10229]
gi|238561237|ref|ZP_00442288.2| lipoprotein, SmpA/OmlA family [Burkholderia mallei GB8 horse 4]
gi|242314106|ref|ZP_04813122.1| lipoprotein, SmpA/OmlA family [Burkholderia pseudomallei 1106b]
gi|124292074|gb|ABN01343.1| lipoprotein, SmpA/OmlA family [Burkholderia mallei NCTC 10229]
gi|238524911|gb|EEP88341.1| lipoprotein, SmpA/OmlA family [Burkholderia mallei GB8 horse 4]
gi|242137345|gb|EES23747.1| lipoprotein, SmpA/OmlA family [Burkholderia pseudomallei 1106b]
Length = 279
Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 9/81 (11%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + S + G SR V LG+P + + + +R +Y +
Sbjct: 52 ITVVQGNFVSQEKASQLQVGMSREQVRALLGTPLLTDMFHADRWDYLFYFKRG------- 104
Query: 96 FLSPKIMEYIVLKITFGEKGV 116
S +++ L + F +
Sbjct: 105 --STSVVQQRDLVVNFAGDRL 123
>gi|92115213|ref|YP_575141.1| SmpA/OmlA [Chromohalobacter salexigens DSM 3043]
gi|91798303|gb|ABE60442.1| SmpA/OmlA [Chromohalobacter salexigens DSM 3043]
Length = 143
Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 48/137 (35%), Gaps = 19/137 (13%)
Query: 16 SFNKALFIIVIGLVVDYHVSYGSI------SGASLDMSAISLVSQGSSRSHVIESLGSPS 69
F +V+ LV SY + G ++ +S + G ++ V +GSP
Sbjct: 4 LIKTVTFSVVLALV--SGCSYVGVYKRDLAQGNLINQDMVSQLETGMTKEQVRYVMGSPL 61
Query: 70 FSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRR 129
N +R +Y+ + + +E + +TF + G ++ +
Sbjct: 62 LKGPFNEDRWDYVFYLDE-------AYDD---VEEKRVTLTF-QNGRLADIDRHGNIEDD 110
Query: 130 FNPNPHTIPAPIQTADG 146
+ P + P P G
Sbjct: 111 VDLTPQSGPGPAVEGSG 127
>gi|167920500|ref|ZP_02507591.1| outer membrane lipoprotein, putatitve [Burkholderia pseudomallei
BCC215]
Length = 148
Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 9/81 (11%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + S + G SR V LG+P + + + +R +Y +
Sbjct: 36 ITVVQGNFVSQEKASQLQVGMSREQVRALLGTPLLTDMFHADRWDYLFYFKRG------- 88
Query: 96 FLSPKIMEYIVLKITFGEKGV 116
S +++ L + F +
Sbjct: 89 --STSVVQQRDLVVNFAGDRL 107
>gi|53725680|ref|YP_104004.1| outer membrane lipoprotein, putatitve [Burkholderia mallei ATCC
23344]
gi|52429103|gb|AAU49696.1| outer membrane lipoprotein, putatitve [Burkholderia mallei ATCC
23344]
Length = 276
Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 9/81 (11%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + S + G SR V LG+P + + + +R +Y +
Sbjct: 49 ITVVQGNFVSQEKASQLQVGMSREQVRALLGTPLLTDMFHADRWDYLFYFKRG------- 101
Query: 96 FLSPKIMEYIVLKITFGEKGV 116
S +++ L + F +
Sbjct: 102 --STSVVQQRDLVVNFAGDRL 120
>gi|53720550|ref|YP_109536.1| putative outer membrane protein [Burkholderia pseudomallei K96243]
gi|52210964|emb|CAH36952.1| putative outer membrane protein [Burkholderia pseudomallei K96243]
Length = 274
Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 9/81 (11%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + S + G SR V LG+P + + + +R +Y +
Sbjct: 49 ITVVQGNFVSQEKASQLQVGMSREQVRALLGTPLLTDMFHADRWDYLFYFKRG------- 101
Query: 96 FLSPKIMEYIVLKITFGEKGV 116
S +++ L + F +
Sbjct: 102 --STSVVQQRDLVVNFAGDRL 120
>gi|121598517|ref|YP_991724.1| SmpA/OmlA family lipoprotein [Burkholderia mallei SAVP1]
gi|251766606|ref|ZP_02264394.2| lipoprotein, SmpA/OmlA family [Burkholderia mallei PRL-20]
gi|121227327|gb|ABM49845.1| lipoprotein, SmpA/OmlA family [Burkholderia mallei SAVP1]
gi|243065221|gb|EES47407.1| lipoprotein, SmpA/OmlA family [Burkholderia mallei PRL-20]
Length = 242
Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 9/81 (11%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + S + G SR V LG+P + + + +R +Y +
Sbjct: 52 ITVVQGNFVSQEKASQLQVGMSREQVRALLGTPLLTDMFHADRWDYLFYFKRG------- 104
Query: 96 FLSPKIMEYIVLKITFGEKGV 116
S +++ L + F +
Sbjct: 105 --STSVVQQRDLVVNFAGDRL 123
>gi|153824610|ref|ZP_01977277.1| small protein A [Vibrio cholerae MZO-2]
gi|254285529|ref|ZP_04960493.1| small protein A [Vibrio cholerae AM-19226]
gi|149741828|gb|EDM55857.1| small protein A [Vibrio cholerae MZO-2]
gi|150424391|gb|EDN16328.1| small protein A [Vibrio cholerae AM-19226]
Length = 136
Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 36/117 (30%), Gaps = 17/117 (14%)
Query: 10 FFFGKLSFNKALFIIVIGLVVDYHV---SYGSISGASLDMSAISLVSQGSSRSHVIESLG 66
F K L + + G +D ++ + G S+ V LG
Sbjct: 18 MQFTKWFIALPLAVTALSGCSLLERLVYRIDINQGNYVDQQSVDQLKFGMSKEQVRFVLG 77
Query: 67 SPSFSILHNGNRSQSFYYVSQKKK--WFPVKFLSPKIMEYIVLKITFGEKGVVSSVS 121
SP ++YY+ + PV L + F + G + +V+
Sbjct: 78 SPMLV---ENGYPDTWYYIYHHTQGHNDPV---------QKNLIVKFNDGGKLVNVA 122
>gi|257137921|ref|ZP_05586183.1| outer membrane lipoprotein, putatitve [Burkholderia thailandensis
E264]
Length = 257
Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 9/81 (11%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + S + G SR V LG+P + + + +R +Y +
Sbjct: 26 ITVVQGNFVSQEKASQLQVGMSREQVRALLGTPLLTDMFHADRWDYVFYFKRG------- 78
Query: 96 FLSPKIMEYIVLKITFGEKGV 116
S +++ L + F +
Sbjct: 79 --STSVVQQRDLVVNFAGDRL 97
>gi|167580569|ref|ZP_02373443.1| outer membrane lipoprotein, putatitve [Burkholderia thailandensis
TXDOH]
Length = 259
Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 9/81 (11%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + S + G SR V LG+P + + + +R +Y +
Sbjct: 26 ITVVQGNFVSQEKASQLQVGMSREQVRALLGTPLLTDMFHADRWDYVFYFKRG------- 78
Query: 96 FLSPKIMEYIVLKITFGEKGV 116
S +++ L + F +
Sbjct: 79 --STSVVQQRDLVVNFAGDRL 97
>gi|119478695|ref|ZP_01618574.1| outer membrane lipoprotein OmlA [marine gamma proteobacterium
HTCC2143]
gi|119448376|gb|EAW29629.1| outer membrane lipoprotein OmlA [marine gamma proteobacterium
HTCC2143]
Length = 128
Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 43/120 (35%), Gaps = 11/120 (9%)
Query: 14 KLSFNKALFIIVIGLVVDYHVSYGSIS---GASLDMSAISLVSQGSSRSHVIESLGSPSF 70
++ + I+++G I+ G + + + G S V +G+P
Sbjct: 6 QIFVTVLVSILIVGCSTLEFPGAYKINIEQGNVITQDMVDQLKPGMSMEQVEYVMGTPLI 65
Query: 71 SILHNGNRSQSFYYVS---QKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPN 127
NG+R Y + Q +K + EY LK F + S+VS + +
Sbjct: 66 KDSFNGDRWDYVYNIKRGDQPRKQHRISI----FFEYESLK-YFTGDFIPSNVSNQADSD 120
>gi|293390894|ref|ZP_06635228.1| SmpA protein [Aggregatibacter actinomycetemcomitans D7S-1]
gi|290951428|gb|EFE01547.1| SmpA protein [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 137
Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 10/99 (10%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
AL + V G L+ S ++ + G + V LG+P +L + +
Sbjct: 13 ALSVTACSTVNKVVYRIDVPQGNYLEASKVTQLKTGMTAQQVQYLLGTP---VLIDPYSN 69
Query: 80 QSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVS 118
++YYV ++K + +P E L + F + G VS
Sbjct: 70 HTWYYVYLQQK----AYETP---EQHTLVVNFDQNGTVS 101
>gi|262373218|ref|ZP_06066497.1| outer membrane lipoprotein [Acinetobacter junii SH205]
gi|262313243|gb|EEY94328.1| outer membrane lipoprotein [Acinetobacter junii SH205]
Length = 132
Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 32/107 (29%), Gaps = 11/107 (10%)
Query: 21 LFIIVIGLVVDYHVSYGSI------SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILH 74
+ + + V S + G L + S V G S V LGSP+ +
Sbjct: 4 IMLALFVTSVLSGCSVFGVYKVDIPQGTPLTKAQASQVQVGMSFQQVRFLLGSPTVTDPL 63
Query: 75 NGNRSQSFY-YVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV 120
N R Y Y+ LKI F G V +
Sbjct: 64 NPLRWDYIYNYIPGTYAKKA----KIPAAHGQHLKIYFDANGNVERI 106
>gi|167618678|ref|ZP_02387309.1| outer membrane lipoprotein, putatitve [Burkholderia thailandensis
Bt4]
Length = 203
Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 9/81 (11%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + S + G SR V LG+P + + + +R +Y +
Sbjct: 26 ITVVQGNFVSQEKASQLQVGMSREQVRALLGTPLLTDMFHADRWDYVFYFKRG------- 78
Query: 96 FLSPKIMEYIVLKITFGEKGV 116
S +++ L + F +
Sbjct: 79 --STSVVQQRDLVVNFAGDRL 97
>gi|83719953|ref|YP_441754.1| outer membrane lipoprotein [Burkholderia thailandensis E264]
gi|83653778|gb|ABC37841.1| outer membrane lipoprotein, putatitve [Burkholderia thailandensis
E264]
Length = 267
Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 9/81 (11%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + S + G SR V LG+P + + + +R +Y +
Sbjct: 36 ITVVQGNFVSQEKASQLQVGMSREQVRALLGTPLLTDMFHADRWDYVFYFKRG------- 88
Query: 96 FLSPKIMEYIVLKITFGEKGV 116
S +++ L + F +
Sbjct: 89 --STSVVQQRDLVVNFAGDRL 107
>gi|167837880|ref|ZP_02464763.1| outer membrane lipoprotein, putatitve [Burkholderia thailandensis
MSMB43]
Length = 165
Score = 38.9 bits (89), Expect = 0.20, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 9/81 (11%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + S + G SR V LG+P + + + +R +Y +
Sbjct: 36 ITVVQGNFVSQEKASQLQVGMSREQVRALLGTPLLTDMFHADRWDYIFYFKRG------- 88
Query: 96 FLSPKIMEYIVLKITFGEKGV 116
S +++ L + F +
Sbjct: 89 --STSVVQQRDLVVNFAGDRL 107
>gi|220934142|ref|YP_002513041.1| outer membrane lipoprotein [Thioalkalivibrio sp. HL-EbGR7]
gi|219995452|gb|ACL72054.1| outer membrane lipoprotein [Thioalkalivibrio sp. HL-EbGR7]
Length = 117
Score = 38.9 bits (89), Expect = 0.20, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 38/114 (33%), Gaps = 21/114 (18%)
Query: 23 IIVIGLVVDYHVSYGSI--------SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILH 74
+++I ++ G G LD I+ + G S V LG P
Sbjct: 15 LVLIASLLLQGCGSGLFSVFRPDIQQGNHLDDERIAQLETGMSPEQVRFLLGEPVLRDPF 74
Query: 75 NGNRSQSFYYVSQKKKWFPVKFLSP--KIMEYIVLKITFGEKGVVSSVSMERLP 126
+G+ ++W V +L P + L I F VSS+ L
Sbjct: 75 HGD-----------RRWEYVYYLKPGDGQAQRRRLTILFDGAYRVSSIEDSGLK 117
>gi|262172129|ref|ZP_06039807.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio mimicus MB-451]
gi|261893205|gb|EEY39191.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio mimicus MB-451]
Length = 119
Score = 38.9 bits (89), Expect = 0.20, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 24/79 (30%), Gaps = 6/79 (7%)
Query: 10 FFFGKLSFNKALFIIVIGLVVDYHV---SYGSISGASLDMSAISLVSQGSSRSHVIESLG 66
F K L + + G +D ++ + G S+ V LG
Sbjct: 1 MQFTKWFIALPLAVTALSGCSLLERLVYRIDINQGNYVDQQSVDQLKFGMSKEQVRFVLG 60
Query: 67 SPSFSILHNGNRSQSFYYV 85
SP ++YY+
Sbjct: 61 SPMLV---ENGYPDTWYYI 76
>gi|33152315|ref|NP_873668.1| small protein A [Haemophilus ducreyi 35000HP]
gi|33148538|gb|AAP96057.1| small protein A [Haemophilus ducreyi 35000HP]
Length = 127
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 41/112 (36%), Gaps = 15/112 (13%)
Query: 14 KLSFNKALFIIVIGLVVDYHVSYGSI-----SGASLDMSAISLVSQGSSRSHVIESLGSP 68
K+ A+ ++ +G+ + G L+ I V G +++ V LG+P
Sbjct: 2 KIKSLLAIALLAVGVTGCSTIKKVVYRIDVPQGNYLEQDKIDQVKIGMNKTQVQYLLGTP 61
Query: 69 SFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV 120
+ ++ ++ ++ PV L I F + G+V +
Sbjct: 62 MLKDIF-HLERWNYVFIKREGYNDPV---------QHTLFIYFDKNGLVKDI 103
>gi|319639454|ref|ZP_07994204.1| SmpA/OmlA family Lipoprotein [Neisseria mucosa C102]
gi|317399349|gb|EFV80020.1| SmpA/OmlA family Lipoprotein [Neisseria mucosa C102]
Length = 131
Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 46/141 (32%), Gaps = 28/141 (19%)
Query: 17 FNKALFIIVIGLVVDYHVSY-----------GSISGASLDMSAISLVSQGSSRSHVIESL 65
NKAL + + ++ S I G L+ A+ + QG +R V L
Sbjct: 1 MNKALCLAIAAILGLASCSAERVSNFPSYKLKIIQGNELNPRAVVSLRQGMTRDQVQLLL 60
Query: 66 GSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEK------GVVSS 119
G+P + +R + S+ I E L + F G
Sbjct: 61 GTPLLRDAFHADRWDYTFNTSRNGI----------IKEQSNLTLYFENDVLARAEGDAIQ 110
Query: 120 VSMERLPNRRFNPNPHTIPAP 140
S+E + + N P T P
Sbjct: 111 KSIEAVQAGQ-NIVPTTETKP 130
>gi|261867361|ref|YP_003255283.1| SmpA protein [Aggregatibacter actinomycetemcomitans D11S-1]
gi|261412693|gb|ACX82064.1| SmpA protein [Aggregatibacter actinomycetemcomitans D11S-1]
Length = 137
Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 10/99 (10%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
AL + V G L+ S ++ + G + V LG+P +L + +
Sbjct: 13 ALSVTACSTVNKVVYRIDVPQGNYLEASKVTQLKTGMTAQQVQYLLGTP---VLIDPYSN 69
Query: 80 QSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVS 118
++YYV ++K + +P E L + F + G VS
Sbjct: 70 HTWYYVYLQQK----AYETP---EQHTLVVNFDQNGAVS 101
>gi|239993803|ref|ZP_04714327.1| SmpA/OmlA [Alteromonas macleodii ATCC 27126]
gi|332140797|ref|YP_004426535.1| SmpA/OmlA [Alteromonas macleodii str. 'Deep ecotype']
gi|327550819|gb|AEA97537.1| SmpA/OmlA [Alteromonas macleodii str. 'Deep ecotype']
Length = 118
Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 23/64 (35%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G LD + + G ++ VI LG+P + + Y + + K F
Sbjct: 30 QGNFLDQRDVEKLRVGMTKEQVIYVLGNPVVQDSFDDDTWYYVYDMKRGMKKRGEDFQKQ 89
Query: 100 KIME 103
++
Sbjct: 90 MVIN 93
>gi|323144901|ref|ZP_08079464.1| SmpA / OmlA family protein [Succinatimonas hippei YIT 12066]
gi|322415299|gb|EFY06070.1| SmpA / OmlA family protein [Succinatimonas hippei YIT 12066]
Length = 171
Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 41/112 (36%), Gaps = 17/112 (15%)
Query: 3 KILFLNNFFFGKLSFNKALFIIVIGLVVDYHVSYGSI-------SGASLDMSAISLVSQG 55
K+L +N F F+++ L+ V G ++ I+ + G
Sbjct: 17 KMLIVNLRFN---FMRSRKFLLISSLIASLAVFSSGCAYRADLAQGNFVEQENINKLHYG 73
Query: 56 SSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVL 107
S V LG+P + + +YYV +F + P+I IVL
Sbjct: 74 MSAEQVRFILGTPMLVDPFD---NSRWYYV----HYFREGWDDPQIKNLIVL 118
>gi|284006725|emb|CBA71982.1| lipoprotein [Arsenophonus nasoniae]
Length = 120
Score = 38.9 bits (89), Expect = 0.25, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 44/112 (39%), Gaps = 13/112 (11%)
Query: 14 KLSFNKALFIIVIGLVVDYHV---SYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSF 70
KL AL +++ G L S ++ + +G ++ V +LG+P
Sbjct: 6 KLLIAAALSVVLTAGCSMAERLVYRPDINQGNYLSTSDVAKIQKGMTQQQVAYTLGTPML 65
Query: 71 SILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSM 122
+ Q +YY+ +++ + ++ L +TF + G++ +
Sbjct: 66 K---DPFGQQVWYYIFRQQPGH-------EEVKQQTLTLTFDQNGILVDIKN 107
>gi|254246341|ref|ZP_04939662.1| SmpA/OmlA [Burkholderia cenocepacia PC184]
gi|124871117|gb|EAY62833.1| SmpA/OmlA [Burkholderia cenocepacia PC184]
Length = 284
Score = 38.9 bits (89), Expect = 0.25, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 30/83 (36%), Gaps = 9/83 (10%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + + + G +R V LG+P + + + +R +Y +
Sbjct: 52 ITVVQGNFVSQEKAAQLQAGMTREQVRALLGTPLLADMFHADRWDYLFYFKRG------- 104
Query: 96 FLSPKIMEYIVLKITFGEKGVVS 118
S I++ L + F V S
Sbjct: 105 --STSIVQQRDLVVYFSGDRVAS 125
>gi|225077517|ref|ZP_03720716.1| hypothetical protein NEIFLAOT_02580 [Neisseria flavescens
NRL30031/H210]
gi|224951137|gb|EEG32346.1| hypothetical protein NEIFLAOT_02580 [Neisseria flavescens
NRL30031/H210]
Length = 131
Score = 38.6 bits (88), Expect = 0.26, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 46/141 (32%), Gaps = 28/141 (19%)
Query: 17 FNKALFIIVIGLVVDYHVSY-----------GSISGASLDMSAISLVSQGSSRSHVIESL 65
NKAL + + ++ S I G L+ A+ + QG +R V L
Sbjct: 1 MNKALCLAIAAILGLASCSAERVSNFPSYKLKIIQGNELNPRAVVSLRQGMTRDQVQLLL 60
Query: 66 GSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEK------GVVSS 119
G+P + +R + S+ I E L + F G
Sbjct: 61 GTPLLRDAFHADRWDYTFNTSRNGI----------IKEQSNLTLYFENDVLARAEGDAIQ 110
Query: 120 VSMERLPNRRFNPNPHTIPAP 140
S+E + + N P T P
Sbjct: 111 KSIEAVQAGQ-NVVPTTETKP 130
>gi|261212091|ref|ZP_05926377.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio sp. RC341]
gi|260838699|gb|EEX65350.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio sp. RC341]
Length = 119
Score = 38.6 bits (88), Expect = 0.27, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 36/117 (30%), Gaps = 17/117 (14%)
Query: 10 FFFGKLSFNKALFIIVIGLVVDYHV---SYGSISGASLDMSAISLVSQGSSRSHVIESLG 66
F K L + + G +D ++ + G S+ V LG
Sbjct: 1 MQFTKWFIALPLAVTALSGCSLLERLVYRIDINQGNYVDQQSVDQLKFGMSKDQVRFVLG 60
Query: 67 SPSFSILHNGNRSQSFYYVSQKKK--WFPVKFLSPKIMEYIVLKITFGEKGVVSSVS 121
SP ++YY+ + PV L + F E G + +V+
Sbjct: 61 SPMLV---ENGYPDTWYYIYHHTQGHNDPV---------QKNLIVKFNEGGKLVNVA 105
>gi|327482044|gb|AEA85354.1| outer membrane lipoprotein OmlA [Pseudomonas stutzeri DSM 4166]
Length = 170
Score = 38.6 bits (88), Expect = 0.28, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 41/114 (35%), Gaps = 24/114 (21%)
Query: 23 IIVIGLVVDYHVSYGSI------SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNG 76
+ ++GL S+ + G + I + G +R V +G+P + +
Sbjct: 11 LTLVGLFALAGCSFPGVYKVDIQQGNVVTQDMIDQLRPGMTRQQVRFIMGNPLITDTFHP 70
Query: 77 NRSQSFYYV----SQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLP 126
NR Y + SQ+++ + + F ++ ++ + +P
Sbjct: 71 NRWDYLYSIQPGGSQRQQER--------------VSLVFNANDQLAGLAGDFMP 110
>gi|268593269|ref|ZP_06127490.1| small protein A [Providencia rettgeri DSM 1131]
gi|291311165|gb|EFE51618.1| small protein A [Providencia rettgeri DSM 1131]
Length = 130
Score = 38.6 bits (88), Expect = 0.28, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 12/85 (14%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYV-SQKKKWFPVKFLS 98
G L ++ + +G ++ V +LG+P S + +Q++YYV Q+ PV+
Sbjct: 34 QGNYLTAKDVAKIQKGMTQQQVAYTLGTPMLS---DPFGTQTWYYVFRQELGHDPVQ--- 87
Query: 99 PKIMEYIVLKITFGEKGVVSSVSME 123
L + F G+++ + E
Sbjct: 88 -----QETLTLIFDRNGILTDIKNE 107
>gi|254448799|ref|ZP_05062256.1| SmpA / OmlA family [gamma proteobacterium HTCC5015]
gi|198261640|gb|EDY85928.1| SmpA / OmlA family [gamma proteobacterium HTCC5015]
Length = 204
Score = 38.6 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 43/141 (30%), Gaps = 23/141 (16%)
Query: 14 KLSFNKALFIIVIGLVVDYHVS------YGSISGASLDMSAISLVSQGSSRSHVIESLGS 67
+ FN I + + G L+ + V G SR V LG+
Sbjct: 60 RRFFNVRTIIAITAIFSLSACGWLEPHRIEITQGNVLEAKTVDKVQVGMSRQQVRFLLGA 119
Query: 68 PSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPN 127
PS + +H+ +R Y+ K F L + F ++ +
Sbjct: 120 PSVADMHHPDRWD---YIQYNDKQHETVF-------NRRLTLYFEGN-TLAQLERHG--- 165
Query: 128 RRFNPNPHTIPAPIQTADGFL 148
+ + H + +D L
Sbjct: 166 ---DWSDHKDTSGAADSDAVL 183
>gi|11178678|gb|AAG32543.1| outer membrane lipoprotein [Burkholderia pseudomallei]
Length = 133
Score = 38.6 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 9/81 (11%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + S + G SR V LG+P + + + +R +Y +
Sbjct: 49 ITVVQGNFVSQEKASQLQVGMSREQVRALLGTPLLTDMFHADRWDYLFYFKRG------- 101
Query: 96 FLSPKIMEYIVLKITFGEKGV 116
S +++ L + F +
Sbjct: 102 --STSVVQQRDLVVNFAGDRL 120
>gi|121998264|ref|YP_001003051.1| SmpA/OmlA domain-containing protein [Halorhodospira halophila SL1]
gi|121589669|gb|ABM62249.1| SmpA/OmlA domain protein [Halorhodospira halophila SL1]
Length = 111
Score = 38.6 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYV--SQK-KKWFPVKF 96
G L+ I ++ G SR+ V + LG+P +R Y SQ+ +K + F
Sbjct: 37 QGNLLEEEDIEQITVGMSRNQVRQRLGTPVLEHAFEDDRWDYLYERRGSQEARKRLTLHF 96
Query: 97 LSPKIME 103
+++E
Sbjct: 97 DGDELVE 103
>gi|146283649|ref|YP_001173802.1| outer membrane lipoprotein OmlA [Pseudomonas stutzeri A1501]
gi|145571854|gb|ABP80960.1| outer membrane lipoprotein OmlA [Pseudomonas stutzeri A1501]
Length = 201
Score = 38.6 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 41/114 (35%), Gaps = 24/114 (21%)
Query: 23 IIVIGLVVDYHVSYGSI------SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNG 76
+ ++GL S+ + G + I + G +R V +G+P + +
Sbjct: 42 LTLVGLFALAGCSFPGVYKVDIQQGNVVTQDMIDQLRPGMTRQQVRFIMGNPLITDTFHP 101
Query: 77 NRSQSFYYV----SQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLP 126
NR Y + SQ+++ + + F ++ ++ + +P
Sbjct: 102 NRWDYLYSIQPGGSQRQQER--------------VSLVFNANDQLAGLAGDFMP 141
>gi|33598012|ref|NP_885655.1| outer membrane lipoprotein [Bordetella parapertussis 12822]
gi|33574441|emb|CAE38779.1| outer membrane lipoprotein [Bordetella parapertussis]
Length = 182
Score = 38.2 bits (87), Expect = 0.34, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 37 GSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYY 84
G G + ++L+ QG SR V +LGSP+ + + + +R YY
Sbjct: 38 GVQQGNWITKEQVALLQQGMSREQVRFALGSPTLTSVLHADRWDYPYY 85
>gi|33602917|ref|NP_890477.1| outer membrane lipoprotein [Bordetella bronchiseptica RB50]
gi|33568548|emb|CAE34306.1| outer membrane lipoprotein [Bordetella bronchiseptica RB50]
Length = 182
Score = 38.2 bits (87), Expect = 0.34, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 37 GSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYY 84
G G + ++L+ QG SR V +LGSP+ + + + +R YY
Sbjct: 38 GVQQGNWITKEQVALLQQGMSREQVRFALGSPTLTSVLHADRWDYPYY 85
>gi|33593491|ref|NP_881135.1| outer membrane lipoprotein [Bordetella pertussis Tohama I]
gi|4678392|emb|CAB41013.1| putative outer membrane lipoprotein [Bordetella pertussis]
gi|33572847|emb|CAE42780.1| outer membrane lipoprotein [Bordetella pertussis Tohama I]
gi|332382899|gb|AEE67746.1| outer membrane lipoprotein [Bordetella pertussis CS]
Length = 182
Score = 38.2 bits (87), Expect = 0.34, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 37 GSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYY 84
G G + ++L+ QG SR V +LGSP+ + + + +R YY
Sbjct: 38 GVQQGNWITKEQVALLQQGMSREQVRFALGSPTLTSVLHADRWDYPYY 85
>gi|255744651|ref|ZP_05418602.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio cholera CIRS 101]
gi|262161218|ref|ZP_06030329.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio cholerae INDRE 91/1]
gi|262168722|ref|ZP_06036417.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio cholerae RC27]
gi|262191962|ref|ZP_06050128.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio cholerae CT 5369-93]
gi|172044581|sp|P0C6Q9|SMPA_VIBCH RecName: Full=Small protein A homolog; Flags: Precursor
gi|172047463|sp|A5F378|SMPA_VIBC3 RecName: Full=Small protein A homolog; Flags: Precursor
gi|255737682|gb|EET93076.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio cholera CIRS 101]
gi|262022840|gb|EEY41546.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio cholerae RC27]
gi|262028968|gb|EEY47621.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio cholerae INDRE 91/1]
gi|262032137|gb|EEY50709.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio cholerae CT 5369-93]
Length = 119
Score = 38.2 bits (87), Expect = 0.35, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 36/117 (30%), Gaps = 17/117 (14%)
Query: 10 FFFGKLSFNKALFIIVIGLVVDYHV---SYGSISGASLDMSAISLVSQGSSRSHVIESLG 66
F K L + + G +D ++ + G S+ V LG
Sbjct: 1 MQFTKWFIALPLAVTALSGCSLLERLVYRIDINQGNYVDQQSVDQLKFGMSKDQVRFVLG 60
Query: 67 SPSFSILHNGNRSQSFYYVSQKKK--WFPVKFLSPKIMEYIVLKITFGEKGVVSSVS 121
SP ++YY+ + PV L + F + G + +V+
Sbjct: 61 SPMLV---ENGYPDTWYYIYHHTQGHNDPV---------QKNLIVKFNDGGKLVNVA 105
>gi|288941954|ref|YP_003444194.1| SmpA/OmlA domain-containing protein [Allochromatium vinosum DSM
180]
gi|288897326|gb|ADC63162.1| SmpA/OmlA domain protein [Allochromatium vinosum DSM 180]
Length = 164
Score = 38.2 bits (87), Expect = 0.36, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 28/78 (35%), Gaps = 10/78 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + + G ++ V LG+P + NR Y + K+ P+
Sbjct: 49 QGNILTEEMVDALELGMTKRQVNFVLGTPPLVSFFHANRWDYTYTI--KRGHQPM----- 101
Query: 100 KIMEYIVLKITFGEKGVV 117
E L + F + +V
Sbjct: 102 ---EQRNLTLYFEDDQLV 116
>gi|153802039|ref|ZP_01956625.1| small protein A [Vibrio cholerae MZO-3]
gi|124122398|gb|EAY41141.1| small protein A [Vibrio cholerae MZO-3]
Length = 136
Score = 38.2 bits (87), Expect = 0.36, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 36/117 (30%), Gaps = 17/117 (14%)
Query: 10 FFFGKLSFNKALFIIVIGLVVDYHV---SYGSISGASLDMSAISLVSQGSSRSHVIESLG 66
F K L + + G +D ++ + G S+ V LG
Sbjct: 18 MQFTKWFIALPLAVTALSGCSLLERLVYRIDINQGNYVDQQSVDQLKFGMSKDQVRFVLG 77
Query: 67 SPSFSILHNGNRSQSFYYVSQKKK--WFPVKFLSPKIMEYIVLKITFGEKGVVSSVS 121
SP ++YY+ + PV L + F + G + +V+
Sbjct: 78 SPMLV---ENGYPDTWYYIYHHTQGHHDPV---------QKNLIVKFNDGGKLVNVA 122
>gi|308187822|ref|YP_003931953.1| Small protein A precursor [Pantoea vagans C9-1]
gi|308058332|gb|ADO10504.1| Small protein A precursor [Pantoea vagans C9-1]
Length = 115
Score = 38.2 bits (87), Expect = 0.39, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + ++ + G ++ V +LG+P + S +YYV +++
Sbjct: 34 QGNYLVANDVAKIHTGMTQQQVAYTLGTPMMK---DPFGSNVWYYVFRQEPGH------- 83
Query: 100 KIMEYIVLKITFGEKGVVSSVSM 122
+ ++ L +TF GV++++
Sbjct: 84 ESVKQQTLTLTFDGNGVLTNIDN 106
>gi|77164702|ref|YP_343227.1| SmpA/OmlA [Nitrosococcus oceani ATCC 19707]
gi|76883016|gb|ABA57697.1| SmpA/OmlA [Nitrosococcus oceani ATCC 19707]
Length = 196
Score = 38.2 bits (87), Expect = 0.39, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 53/148 (35%), Gaps = 21/148 (14%)
Query: 15 LSFNKALFIIVIGLVVDYHVSYGSIS-GASLDMSAISLVSQGSSRSHVIESLGSPSFSIL 73
+ ++ + + V + G + + +S G S+ V LGSP
Sbjct: 15 IVGCASIALTGCSIERLPGVYRIDVQQGNVITQEMLEKLSPGMSKQQVSFVLGSPLLIDS 74
Query: 74 HNGNRSQSFYYV------SQKKKWFPVK--FLSPKIMEYIVLKITFGEKGVVSSVSMERL 125
+ +R +YY+ ++++K + F K+ G + +
Sbjct: 75 FHPDR---WYYIYSFKPGNERRKQRTITMWFEEGKLS-------YVGGDVEIG-IQRGLQ 123
Query: 126 PNRRFNPNPHTIPAPIQTADGFLRRLLN 153
RR P ++P P Q +G L L++
Sbjct: 124 QERREGPVSISVP-PRQEDEGLLGSLMD 150
>gi|254517261|ref|ZP_05129318.1| conserved hypothetical protein [gamma proteobacterium NOR5-3]
gi|219674099|gb|EED30468.1| conserved hypothetical protein [gamma proteobacterium NOR5-3]
Length = 121
Score = 37.8 bits (86), Expect = 0.44, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 45 DMSAISLVSQGSSRSHVIESLGSPSFSILH--NGNRSQSFYYVSQKK 89
+ IS + GS+R+ V++SLG+PS S +G + +Y +Q+K
Sbjct: 40 NREMISQLEIGSTRTAVVKSLGTPSDSEAFTQDGEEVRVLFYPTQRK 86
>gi|251793481|ref|YP_003008210.1| SmpA protein [Aggregatibacter aphrophilus NJ8700]
gi|247534877|gb|ACS98123.1| SmpA protein [Aggregatibacter aphrophilus NJ8700]
Length = 137
Score = 37.8 bits (86), Expect = 0.46, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 17/109 (15%)
Query: 17 FNKALFIIVIGLVVDYHVSYGSI-------SGASLDMSAISLVSQGSSRSHVIESLGSPS 69
F + ++ L V S + G L + ++ + G + V LG+P
Sbjct: 3 FKSVVTTLIFALSVTACSSINKVVYRIDVPQGNYLQATTVAQLKTGMTAQQVQYLLGTP- 61
Query: 70 FSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVS 118
+L + + ++YYV ++K + +P E L + F +KG VS
Sbjct: 62 --VLIDPYSNNTWYYVFLQQK----AYETP---EQHTLVVNFDQKGTVS 101
>gi|292489110|ref|YP_003531997.1| Small protein A [Erwinia amylovora CFBP1430]
gi|292900230|ref|YP_003539599.1| lipoprotein [Erwinia amylovora ATCC 49946]
gi|291200078|emb|CBJ47204.1| putative lipoprotein [Erwinia amylovora ATCC 49946]
gi|291554544|emb|CBA22134.1| Small protein A precursor [Erwinia amylovora CFBP1430]
gi|312173268|emb|CBX81523.1| Small protein A precursor [Erwinia amylovora ATCC BAA-2158]
Length = 115
Score = 37.8 bits (86), Expect = 0.49, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 41/113 (36%), Gaps = 18/113 (15%)
Query: 18 NKALFIIVIGLVVDYHVSY--------GSISGASLDMSAISLVSQGSSRSHVIESLGSPS 69
V+ L++ S G L + ++ + G ++ V +LG+P
Sbjct: 4 KTLTAAAVVLLMMTAGCSTLERVVYRPDINQGNYLVANDVAKIHTGMTQQQVAYTLGTP- 62
Query: 70 FSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSM 122
+ R+Q FY Q+ PVK L ++F G ++++
Sbjct: 63 -MMQDPFGRNQWFYVFRQEPGHEPVK--------QQTLTLSFDRSGTLTNIDN 106
>gi|262369115|ref|ZP_06062444.1| outer membrane lipoprotein [Acinetobacter johnsonii SH046]
gi|262316793|gb|EEY97831.1| outer membrane lipoprotein [Acinetobacter johnsonii SH046]
Length = 132
Score = 37.8 bits (86), Expect = 0.52, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 34/106 (32%), Gaps = 9/106 (8%)
Query: 21 LFIIVIGLVVDYHVSYGSI------SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILH 74
+ + + + S + G L + S + G S V LGSP+ S
Sbjct: 4 IMLALFVTSLLAGCSTLGVYKVDIPQGTPLTQAQASKIQVGMSHQQVRFLLGSPTVSDPM 63
Query: 75 NGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV 120
N R Y + K P LK+ F G+V +
Sbjct: 64 NPLRWDYIYNYTPGTYAKKAKI--PAAQGQQ-LKVYFDPNGIVQKI 106
>gi|241759172|ref|ZP_04757280.1| lipoprotein [Neisseria flavescens SK114]
gi|241320591|gb|EER56868.1| lipoprotein [Neisseria flavescens SK114]
Length = 131
Score = 37.8 bits (86), Expect = 0.52, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 45/139 (32%), Gaps = 28/139 (20%)
Query: 17 FNKALFIIVIGLVVDYHVSY-----------GSISGASLDMSAISLVSQGSSRSHVIESL 65
NKAL + + ++ S I G L+ A+ + QG +R V L
Sbjct: 1 MNKALCLAIAAILGLASCSAERVSNFPSYKLKIIQGNELNPRAVVSLRQGMTRDQVQLLL 60
Query: 66 GSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEK------GVVSS 119
G+P + +R + S+ I E L + F G
Sbjct: 61 GTPLLRDAFHADRWDYTFNTSRNGI----------IKEQSNLTLYFENDVLERAEGDAIQ 110
Query: 120 VSMERLPNRRFNPNPHTIP 138
S+E + + N P T
Sbjct: 111 KSIEAVQAGQ-NVVPTTAT 128
>gi|254434795|ref|ZP_05048303.1| SmpA / OmlA family [Nitrosococcus oceani AFC27]
gi|207091128|gb|EDZ68399.1| SmpA / OmlA family [Nitrosococcus oceani AFC27]
Length = 189
Score = 37.8 bits (86), Expect = 0.52, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 53/148 (35%), Gaps = 21/148 (14%)
Query: 15 LSFNKALFIIVIGLVVDYHVSYGSIS-GASLDMSAISLVSQGSSRSHVIESLGSPSFSIL 73
+ ++ + + V + G + + +S G S+ V LGSP
Sbjct: 8 IVGCASIALTGCSIERLPGVYRIDVQQGNVITQEMLEKLSPGMSKQQVSFVLGSPLLIDS 67
Query: 74 HNGNRSQSFYYV------SQKKKWFPVK--FLSPKIMEYIVLKITFGEKGVVSSVSMERL 125
+ +R +YY+ ++++K + F K+ G + +
Sbjct: 68 FHPDR---WYYIYSFKPGNERRKQRTITMWFEEGKLS-------YVGGDVEIG-IQRGLQ 116
Query: 126 PNRRFNPNPHTIPAPIQTADGFLRRLLN 153
RR P ++P P Q +G L L++
Sbjct: 117 QERREGPVSISVP-PRQEDEGLLGSLMD 143
>gi|332306974|ref|YP_004434825.1| SmpA/OmlA domain-containing protein [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332174303|gb|AEE23557.1| SmpA/OmlA domain-containing protein [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 118
Score = 37.8 bits (86), Expect = 0.53, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
Query: 22 FIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQS 81
+++ D+ G LD +S + ++ V+ LG P + + +
Sbjct: 12 ASLMLSACADWIYRIDVPQGNFLDERDVSKLRINMTKEQVVYVLGKPVVEDSFDHD---T 68
Query: 82 FYYVSQKKK 90
+YY+ Q K+
Sbjct: 69 WYYLYQMKR 77
>gi|261345460|ref|ZP_05973104.1| small protein A [Providencia rustigianii DSM 4541]
gi|282566507|gb|EFB72042.1| small protein A [Providencia rustigianii DSM 4541]
Length = 135
Score = 37.8 bits (86), Expect = 0.53, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 14 KLSFNKALFIIVIGL---VVDYHVSYGSIS-GASLDMSAISLVSQGSSRSHVIESLGSPS 69
KL AL ++ +++ V + I+ G L ++ + +G ++ V +LG+P
Sbjct: 4 KLLTAAALSFALMSTGCSMMERLVYHPDINQGNYLTAKDVAKIKKGMTQQQVAYTLGTPM 63
Query: 70 FSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSME 123
+ + SQ+++YV +++ L ++ L +TF G+++ + E
Sbjct: 64 MT---DPFGSQTWFYVFRQE-------LGHDPVKQETLTLTFDRTGILTDIKNE 107
>gi|119898868|ref|YP_934081.1| putative outer membrane lipoprotein OmlA [Azoarcus sp. BH72]
gi|119671281|emb|CAL95194.1| putative outer membrane lipoprotein OmlA [Azoarcus sp. BH72]
Length = 169
Score = 37.8 bits (86), Expect = 0.55, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 37/115 (32%), Gaps = 22/115 (19%)
Query: 14 KLSFNKALFIIVIGLVVDYHVSYGSI------------SGASLDMSAISLVSQGSSRSHV 61
KL L + + S G+I G +D + +S + +G SR V
Sbjct: 30 KLPMRSLLIPAFVAASMLAGCSIGTIAQKVDPYRIDIRQGNYVDQAMVSQLKRGMSREQV 89
Query: 62 IESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGV 116
LG+P + NR Y F P E V + F + +
Sbjct: 90 RFVLGTPLVVDIFRSNRWDYVY-------RFKPGNGEP---EQRVFSVFFVDDKL 134
>gi|157804144|ref|YP_001492693.1| hypothetical protein A1E_04960 [Rickettsia canadensis str. McKiel]
gi|157785407|gb|ABV73908.1| hypothetical protein A1E_04960 [Rickettsia canadensis str. McKiel]
Length = 157
Score = 37.8 bits (86), Expect = 0.55, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 23 IIVIGLVVDYHVSYGSISGASLDMSAI-SLVSQGSSRSHVIESLGSPSFSILHNGNRSQS 81
++ G S+D SA+ L S+ +++ V+E +G+P+ ++ N
Sbjct: 9 FSILAFFALSGCKTIENRGQSIDDSALVKLKSKKLNKAEVVELIGTPTMVPEYSQN---I 65
Query: 82 FYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV 120
+YYV + +L+ KI + ++KI F + V
Sbjct: 66 WYYVERVMSQR--AWLNSKIEKQKIVKIIFDANSFMQEV 102
>gi|304398635|ref|ZP_07380507.1| SmpA/OmlA domain protein [Pantoea sp. aB]
gi|304353846|gb|EFM18221.1| SmpA/OmlA domain protein [Pantoea sp. aB]
Length = 115
Score = 37.8 bits (86), Expect = 0.56, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + ++ + G ++ V +LG+P + S +YYV +++
Sbjct: 34 QGNYLVANDVAKIHTGMTQQQVAYTLGTPMMK---DPFGSNVWYYVFRQEPGH------- 83
Query: 100 KIMEYIVLKITFGEKGVVSSVSM 122
+ ++ L +TF GV++++
Sbjct: 84 EGVKQQTLTLTFDGNGVLTNIDN 106
>gi|50084117|ref|YP_045627.1| outer membrane lipoprotein [Acinetobacter sp. ADP1]
gi|49530093|emb|CAG67805.1| outer membrane lipoprotein [Acinetobacter sp. ADP1]
Length = 132
Score = 37.8 bits (86), Expect = 0.57, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 41/117 (35%), Gaps = 12/117 (10%)
Query: 21 LFIIVIGLVVDYHVSYGSI------SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILH 74
L + + + S + G L + S V G S V LGSP+ +
Sbjct: 4 LMLALFVTSLLAGCSTLGVYKVDIPQGTPLTKAQASKVQVGMSYQQVRFLLGSPTITDPL 63
Query: 75 NGNRSQSFY-YVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV-SMERLPNRR 129
N R Y Y+ LKI F E G+V S+ ++ LP+ +
Sbjct: 64 NPLRWDYIYNYIPGTYAKKA----KIPAAHGQHLKIYFNESGIVKSIEGIDTLPDSQ 116
>gi|317049195|ref|YP_004116843.1| SmpA/OmlA domain-containing protein [Pantoea sp. At-9b]
gi|316950812|gb|ADU70287.1| SmpA/OmlA domain protein [Pantoea sp. At-9b]
Length = 115
Score = 37.8 bits (86), Expect = 0.58, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 36/83 (43%), Gaps = 10/83 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + ++ + G ++ V +LG+P + S +YY+ +++
Sbjct: 34 QGNYLVANDVAKIHTGMTQQQVAYTLGTPMMR---DPFGSNVWYYIFREEPGH------- 83
Query: 100 KIMEYIVLKITFGEKGVVSSVSM 122
+ + L +TF GV++++
Sbjct: 84 ERVRQQTLTLTFDSNGVLTNIDN 106
>gi|325920211|ref|ZP_08182166.1| small protein A (tmRNA-binding) [Xanthomonas gardneri ATCC 19865]
gi|325549297|gb|EGD20196.1| small protein A (tmRNA-binding) [Xanthomonas gardneri ATCC 19865]
Length = 131
Score = 37.4 bits (85), Expect = 0.59, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 36/108 (33%), Gaps = 12/108 (11%)
Query: 12 FGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFS 71
L A+ + G + Y G + +A+ + G S+ V LG+PS
Sbjct: 1 MRNLLLVAAVALSTAGCGIIY--KQPIYQGNLIKQNAVEQLQVGQSKQQVSALLGTPSIP 58
Query: 72 ILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSS 119
+ +Q + Y S ++ E + F + V+
Sbjct: 59 ---DPFHAQRWDYTSTQRVDRLAH------TEVKNFVVYFENE-QVTR 96
>gi|15640867|ref|NP_230498.1| small protein A [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121585689|ref|ZP_01675484.1| small protein A [Vibrio cholerae 2740-80]
gi|121726019|ref|ZP_01679318.1| small protein A [Vibrio cholerae V52]
gi|147673557|ref|YP_001216332.1| small protein A [Vibrio cholerae O395]
gi|153818051|ref|ZP_01970718.1| small protein A [Vibrio cholerae NCTC 8457]
gi|153822049|ref|ZP_01974716.1| small protein A [Vibrio cholerae B33]
gi|227081027|ref|YP_002809578.1| small protein A [Vibrio cholerae M66-2]
gi|229505539|ref|ZP_04395049.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio cholerae BX 330286]
gi|229510790|ref|ZP_04400269.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio cholerae B33]
gi|229513045|ref|ZP_04402511.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio cholerae TMA 21]
gi|229517911|ref|ZP_04407355.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio cholerae RC9]
gi|229523344|ref|ZP_04412751.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio cholerae TM 11079-80]
gi|229525474|ref|ZP_04414879.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio cholerae bv. albensis
VL426]
gi|229608559|ref|YP_002879207.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio cholerae MJ-1236]
gi|254847988|ref|ZP_05237338.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|297581240|ref|ZP_06943164.1| small protein A [Vibrio cholerae RC385]
gi|298499020|ref|ZP_07008827.1| small protein A [Vibrio cholerae MAK 757]
gi|9655303|gb|AAF94013.1| small protein A [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121550052|gb|EAX60068.1| small protein A [Vibrio cholerae 2740-80]
gi|121631501|gb|EAX63871.1| small protein A [Vibrio cholerae V52]
gi|126511397|gb|EAZ73991.1| small protein A [Vibrio cholerae NCTC 8457]
gi|126520443|gb|EAZ77666.1| small protein A [Vibrio cholerae B33]
gi|146315440|gb|ABQ19979.1| small protein A [Vibrio cholerae O395]
gi|227008915|gb|ACP05127.1| small protein A [Vibrio cholerae M66-2]
gi|227012671|gb|ACP08881.1| small protein A [Vibrio cholerae O395]
gi|229339055|gb|EEO04072.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio cholerae bv. albensis
VL426]
gi|229339707|gb|EEO04722.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio cholerae TM 11079-80]
gi|229344626|gb|EEO09600.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio cholerae RC9]
gi|229349938|gb|EEO14892.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio cholerae TMA 21]
gi|229350755|gb|EEO15696.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio cholerae B33]
gi|229357762|gb|EEO22679.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio cholerae BX 330286]
gi|229371214|gb|ACQ61637.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio cholerae MJ-1236]
gi|254843693|gb|EET22107.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|297534556|gb|EFH73393.1| small protein A [Vibrio cholerae RC385]
gi|297543353|gb|EFH79403.1| small protein A [Vibrio cholerae MAK 757]
Length = 136
Score = 37.4 bits (85), Expect = 0.59, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 36/117 (30%), Gaps = 17/117 (14%)
Query: 10 FFFGKLSFNKALFIIVIGLVVDYHV---SYGSISGASLDMSAISLVSQGSSRSHVIESLG 66
F K L + + G +D ++ + G S+ V LG
Sbjct: 18 MQFTKWFIALPLAVTALSGCSLLERLVYRIDINQGNYVDQQSVDQLKFGMSKDQVRFVLG 77
Query: 67 SPSFSILHNGNRSQSFYYVSQKKK--WFPVKFLSPKIMEYIVLKITFGEKGVVSSVS 121
SP ++YY+ + PV L + F + G + +V+
Sbjct: 78 SPMLV---ENGYPDTWYYIYHHTQGHNDPV---------QKNLIVKFNDGGKLVNVA 122
>gi|78065212|ref|YP_367981.1| outer membrane lipoprotein, SmpA/OmlA [Burkholderia sp. 383]
gi|77965957|gb|ABB07337.1| outer membrane lipoprotein, SmpA/OmlA [Burkholderia sp. 383]
Length = 272
Score = 37.4 bits (85), Expect = 0.60, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 30/81 (37%), Gaps = 9/81 (11%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + + + G SR V LG+P + + + +R +Y +
Sbjct: 36 ITVVQGNFVSQEKAAQLQVGMSREQVRALLGTPLLADMFHADRWDYLFYFKRG------- 88
Query: 96 FLSPKIMEYIVLKITFGEKGV 116
S +++ L +TF V
Sbjct: 89 --STAVVQQRDLVVTFSGDRV 107
>gi|315225018|ref|ZP_07866836.1| conserved hypothetical protein [Capnocytophaga ochracea F0287]
gi|314944993|gb|EFS97024.1| conserved hypothetical protein [Capnocytophaga ochracea F0287]
Length = 269
Score = 37.4 bits (85), Expect = 0.64, Method: Composition-based stats.
Identities = 17/120 (14%), Positives = 37/120 (30%), Gaps = 10/120 (8%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLG--SPSFSILHNGNRS----QSFYYVSQKKKWF 92
I+G D + +G + + ++ + Q F + K+
Sbjct: 150 IAGMCQDKTTYKYTPEGKLSEESKFTKDELTSKTVYTYDAKGNMVEKQVFDKDNALKQRV 209
Query: 93 PVKFLSPKIMEYIVLKITFGEKGVVSSVSMER-LPNRRFNPNPHTIPAPIQTADGFLRRL 151
F + V F + G V+ + +++ N T+ Q F ++L
Sbjct: 210 VSAFDKN---DNEVEVKYFDKDGNVTKTETYEFVYDKKNNWTKKTMSVNGQRVTIFTQKL 266
>gi|284800159|ref|ZP_05985831.2| lipoprotein, SmpA/OmlA family [Neisseria subflava NJ9703]
gi|284795890|gb|EFC51237.1| lipoprotein, SmpA/OmlA family [Neisseria subflava NJ9703]
Length = 145
Score = 37.4 bits (85), Expect = 0.64, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 36/108 (33%), Gaps = 21/108 (19%)
Query: 18 NKALFIIVIGLVVDYHVSY-----------GSISGASLDMSAISLVSQGSSRSHVIESLG 66
NKAL + + ++ S I G L+ A+ + QG +R V LG
Sbjct: 16 NKALCLAIAAILGLASCSAERVSNFPSYKLKIIQGNELNPRAVVSLRQGMTRDQVQLLLG 75
Query: 67 SPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEK 114
+P + +R + S+ I E L + F
Sbjct: 76 TPLLRDAFHADRWDYTFNTSRNGI----------IKEQSNLTLYFEND 113
>gi|37527249|ref|NP_930593.1| hypothetical protein plu3375 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36786683|emb|CAE15749.1| Small protein A precursor [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 115
Score = 37.4 bits (85), Expect = 0.64, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L +++S + +G ++ V +LG+P + +Q+++YV +++
Sbjct: 34 QGNYLTPTSVSKIHKGMTQQQVAYTLGTPMLQ---DPFGTQTWFYVFRQQPGH------- 83
Query: 100 KIMEYIVLKITFGEKGVVSSVSME 123
+ + L +TF GV++ + E
Sbjct: 84 EKVTQQTLTLTFDSNGVLTDIKNE 107
>gi|88704684|ref|ZP_01102397.1| secreted protein [Congregibacter litoralis KT71]
gi|88701005|gb|EAQ98111.1| secreted protein [Congregibacter litoralis KT71]
Length = 120
Score = 37.4 bits (85), Expect = 0.64, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 17 FNKALFIIVIGLVVDYHV----SYGSISGASLDM----SAISLVSQGSSRSHVIESLGSP 68
++ I ++ V Y + D + IS + G+SR V++SLG+P
Sbjct: 4 LSRICAITLLSFAASGCVFIDGKYVDHNDWRDDQRDNRAMISKLEIGASRDGVVDSLGTP 63
Query: 69 --SFSILHNGNRSQSFYYVSQKK 89
S + H+G + +Y +Q+K
Sbjct: 64 ADSEAFTHDGEEVRVLFYRTQRK 86
>gi|260913188|ref|ZP_05919670.1| small protein A [Pasteurella dagmatis ATCC 43325]
gi|260632775|gb|EEX50944.1| small protein A [Pasteurella dagmatis ATCC 43325]
Length = 144
Score = 37.4 bits (85), Expect = 0.65, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 10/99 (10%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
AL I V G L+ +A+ + G + V LG+P N N
Sbjct: 20 ALSITACSTVDKIVYRIDVPQGNYLEAAAVKQLKVGMTAQQVQYLLGTPVLVEPFNKN-- 77
Query: 80 QSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVS 118
+++YV ++K + SP E L + F ++G+V+
Sbjct: 78 -TWHYVFLQQK----AYTSP---EQHTLVVNFDQRGIVT 108
>gi|291613518|ref|YP_003523675.1| SmpA/OmlA domain protein [Sideroxydans lithotrophicus ES-1]
gi|291583630|gb|ADE11288.1| SmpA/OmlA domain protein [Sideroxydans lithotrophicus ES-1]
Length = 122
Score = 37.4 bits (85), Expect = 0.65, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 31/75 (41%), Gaps = 10/75 (13%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G + + + G ++S V LG+P + ++ +R FY ++Q
Sbjct: 32 QGNLITQEMRAKLKLGMTQSQVRMVLGAPLINDAYHADRWDYFYSLNQ----------QG 81
Query: 100 KIMEYIVLKITFGEK 114
++ME L + F +
Sbjct: 82 QLMEQQRLTLYFDKD 96
>gi|145299832|ref|YP_001142673.1| small protein A [Aeromonas salmonicida subsp. salmonicida A449]
gi|142852604|gb|ABO90925.1| small protein A [Aeromonas salmonicida subsp. salmonicida A449]
Length = 112
Score = 37.4 bits (85), Expect = 0.72, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 39/117 (33%), Gaps = 12/117 (10%)
Query: 10 FFFGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPS 69
L + + G + Y + G ++ + + QG +R V LGS
Sbjct: 1 MRMKHLIAAALTALTLSGCSLVYRIDIP--QGNYVEQKQVDKLRQGMTREQVEFVLGSAM 58
Query: 70 FSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLP 126
+ N ++YY+ + + K E L +TF + + LP
Sbjct: 59 LRDGFDPN---TWYYLYEFQPGRGEK-------ERKELTVTFANDKLATVTGDFPLP 105
>gi|327483597|gb|AEA78004.1| Outer membrane lipoprotein SmpA, a component of the essential
YaeT outer-membrane protein assembly complex [Vibrio
cholerae LMA3894-4]
Length = 119
Score = 37.4 bits (85), Expect = 0.73, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 24/79 (30%), Gaps = 6/79 (7%)
Query: 10 FFFGKLSFNKALFIIVIGLVVDYHV---SYGSISGASLDMSAISLVSQGSSRSHVIESLG 66
F K L + + G +D ++ + G S+ V LG
Sbjct: 1 MQFTKWFIALPLAVTALSGCSLLERLVYRIDINQGNYVDQQSVDQLKFGMSKDQVRFVLG 60
Query: 67 SPSFSILHNGNRSQSFYYV 85
SP ++YY+
Sbjct: 61 SPMLV---ENGYPDTWYYI 76
>gi|319787258|ref|YP_004146733.1| SmpA/OmlA domain-containing protein [Pseudoxanthomonas suwonensis
11-1]
gi|317465770|gb|ADV27502.1| SmpA/OmlA domain-containing protein [Pseudoxanthomonas suwonensis
11-1]
Length = 133
Score = 37.0 bits (84), Expect = 0.77, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 37/112 (33%), Gaps = 11/112 (9%)
Query: 12 FGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFS 71
+L + + + G + Y G ++ A+ + G S+ V LG+PS +
Sbjct: 4 LSRLLLIAPVSLALAGCGILY--KQPIYQGNLMEKDAVDQLRPGLSKQQVAGLLGTPSLA 61
Query: 72 ILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSME 123
+ R Y S++ +E L + F +V
Sbjct: 62 DPFHAQRWD--YAASERTDRAGN-------VEAKTLTLHFENDTLVRWEGDY 104
>gi|262375719|ref|ZP_06068951.1| outer membrane lipoprotein [Acinetobacter lwoffii SH145]
gi|262309322|gb|EEY90453.1| outer membrane lipoprotein [Acinetobacter lwoffii SH145]
Length = 132
Score = 37.0 bits (84), Expect = 0.77, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 35/106 (33%), Gaps = 9/106 (8%)
Query: 21 LFIIVIGLVVDYHVSYGSI------SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILH 74
+ + + + S + G L + + + G S V LGSP+ S
Sbjct: 4 IMLTLFVTSLLVGCSTLGVYKVDIPQGTPLTQAQAAKIQVGMSHQQVRFLLGSPTVSDPL 63
Query: 75 NGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV 120
N R Y + K P LKI F + G+V V
Sbjct: 64 NPLRWDYIYNYTPGTYAKKAKI--PAAQGQH-LKIYFNQSGIVERV 106
>gi|119945321|ref|YP_943001.1| Outer membrane lipoprotein OmlA [Psychromonas ingrahamii 37]
gi|119863925|gb|ABM03402.1| Outer membrane lipoprotein OmlA [Psychromonas ingrahamii 37]
Length = 148
Score = 37.0 bits (84), Expect = 0.78, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYV 85
G ++ + + G S+ VI LGSP + ++ +YY+
Sbjct: 33 TQGNYIEDEKLDQILLGMSQEQVIFILGSPMLIDQFDSSK---WYYI 76
>gi|329120297|ref|ZP_08248965.1| outer membrane lipoprotein OmlA [Neisseria bacilliformis ATCC
BAA-1200]
gi|327462638|gb|EGF08961.1| outer membrane lipoprotein OmlA [Neisseria bacilliformis ATCC
BAA-1200]
Length = 126
Score = 37.0 bits (84), Expect = 0.79, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 29/87 (33%), Gaps = 14/87 (16%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLS 98
I G LD A++ + G SR V LG+P NR Y S
Sbjct: 35 IQGNRLDARAVAALQPGMSRDQVQLLLGTPLLRSAFRQNRWDYTYETS-----------R 83
Query: 99 PKIMEY---IVLKITFGEKGVVSSVSM 122
I++ L + F VV +
Sbjct: 84 NGIIDQAETRNLTVWFENDRVVKAEGN 110
>gi|163855858|ref|YP_001630156.1| outer membrane lipoprotein OmlA [Bordetella petrii DSM 12804]
gi|163259586|emb|CAP41887.1| outer membrane lipoprotein OmlA [Bordetella petrii]
Length = 242
Score = 37.0 bits (84), Expect = 0.81, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYV-----SQKKKWFPV 94
G + ++L+ G +R V +LGSP+ + + + +R YY +++ F V
Sbjct: 41 QGNWITQEQVALLQPGMTREQVRFALGSPTLTSVLHADRWDYPYYFKPGYGKAQERKFTV 100
Query: 95 KFLSPKIM 102
F + +++
Sbjct: 101 WFDNDRLV 108
>gi|83644082|ref|YP_432517.1| small protein A (tmRNA-binding) [Hahella chejuensis KCTC 2396]
gi|83632125|gb|ABC28092.1| Small protein A (tmRNA-binding) [Hahella chejuensis KCTC 2396]
Length = 200
Score = 37.0 bits (84), Expect = 0.83, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 19/46 (41%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYV 85
G ++ A+ + G +R V LGSP + + FY +
Sbjct: 92 QGNIVEKEAVEQLKVGMNRRQVQYLLGSPVLESTLDPSYDTYFYSI 137
>gi|256819516|ref|YP_003140795.1| hypothetical protein Coch_0676 [Capnocytophaga ochracea DSM 7271]
gi|256581099|gb|ACU92234.1| hypothetical protein Coch_0676 [Capnocytophaga ochracea DSM 7271]
Length = 269
Score = 37.0 bits (84), Expect = 0.87, Method: Composition-based stats.
Identities = 17/120 (14%), Positives = 37/120 (30%), Gaps = 10/120 (8%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLG--SPSFSILHNGNRS----QSFYYVSQKKKWF 92
I+G D + +G + + ++ + Q F + K+
Sbjct: 150 IAGMCQDKTTYKYTPEGKLSEESKYTKDELTSKTVYTYDAKGNMVEKQVFDKDNALKQRV 209
Query: 93 PVKFLSPKIMEYIVLKITFGEKGVVSSVSMER-LPNRRFNPNPHTIPAPIQTADGFLRRL 151
F + V F + G V+ + +++ N T+ Q F ++L
Sbjct: 210 VSAFDKN---DNEVEVKYFDKDGNVTKTETYEFVYDKKNNWTKKTMSVDGQRVTIFTQKL 266
>gi|226952370|ref|ZP_03822834.1| outer membrane lipoprotein [Acinetobacter sp. ATCC 27244]
gi|294649634|ref|ZP_06727049.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
gi|226836822|gb|EEH69205.1| outer membrane lipoprotein [Acinetobacter sp. ATCC 27244]
gi|292824477|gb|EFF83265.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
Length = 132
Score = 37.0 bits (84), Expect = 0.87, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 32/107 (29%), Gaps = 11/107 (10%)
Query: 21 LFIIVIGLVVDYHVSYGSI------SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILH 74
+ + + V S + G L + + V G S V LGSP+ S
Sbjct: 4 IMLTLFVTSVLSGCSVFGVYKVDIPQGTPLTKAQAAQVQVGMSFQQVRFLLGSPTISDPL 63
Query: 75 NGNRSQSFY-YVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV 120
N R Y Y+ L+I F G V +
Sbjct: 64 NPQRWDYIYNYIPGTYAKKA----KIPAAHGQHLQIYFDANGNVERI 106
>gi|221202473|ref|ZP_03575504.1| lipoprotein, SmpA/OmlA family [Burkholderia multivorans CGD2M]
gi|221208070|ref|ZP_03581075.1| lipoprotein, SmpA/OmlA family [Burkholderia multivorans CGD2]
gi|221213184|ref|ZP_03586159.1| lipoprotein, SmpA/OmlA family [Burkholderia multivorans CGD1]
gi|221166636|gb|EED99107.1| lipoprotein, SmpA/OmlA family [Burkholderia multivorans CGD1]
gi|221171973|gb|EEE04415.1| lipoprotein, SmpA/OmlA family [Burkholderia multivorans CGD2]
gi|221177646|gb|EEE10062.1| lipoprotein, SmpA/OmlA family [Burkholderia multivorans CGD2M]
Length = 260
Score = 37.0 bits (84), Expect = 0.92, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 34/91 (37%), Gaps = 9/91 (9%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + + + G +R V LG+P + + + +R +Y +
Sbjct: 36 ITVVQGNFVSQEKAAQLQTGMTREQVRALLGTPLLTDMFHADRWDYLFYFKRG------- 88
Query: 96 FLSPKIMEYIVLKITFGEKGVVSSVSMERLP 126
S +++ L +TF + S E LP
Sbjct: 89 --STSVVQQRDLVLTFSGDRLASWTGAENLP 117
>gi|94676973|ref|YP_588995.1| small protein A [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
gi|94220123|gb|ABF14282.1| small protein A [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
Length = 110
Score = 37.0 bits (84), Expect = 0.92, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 49/119 (41%), Gaps = 15/119 (12%)
Query: 9 NFFFGKLSFNKALFIIVIGLVVDYHV---SYGSISGASLDMSAISLVSQGSSRSHVIESL 65
N + +L+ +I Y++ + G L + + + G ++ V L
Sbjct: 2 NLIYHQLTVIVLFALIFTSSCSMYNIVIYHHNLHQGNYLTKTDVDQIHIGMTKQQVSNIL 61
Query: 66 GSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMER 124
G+P F +++ ++YY+ + K ++ + + + +TF + +++++
Sbjct: 62 GTPIF-----QDQNNTWYYIDRCK-------INHQHLTQKRVILTFNKSDILTNLDKFT 108
>gi|15838936|ref|NP_299624.1| outer membrane protein [Xylella fastidiosa 9a5c]
gi|9107519|gb|AAF85144.1|AE004045_2 outer membrane protein [Xylella fastidiosa 9a5c]
Length = 145
Score = 37.0 bits (84), Expect = 0.92, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 31/80 (38%), Gaps = 10/80 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G + A+ + G ++ V LG+PS S + + +R Y S ++
Sbjct: 43 QGNLIKKEAVDQLKVGMNKQEVALLLGTPSISDIFHTDRWD---YTSAQRIDRIAH---- 95
Query: 100 KIMEYIVLKITFGEKGVVSS 119
E L I F + +V+
Sbjct: 96 --TEIKNLTIYF-QNDLVTR 112
>gi|285018458|ref|YP_003376169.1| small membrane lipoprotein a (smpa) [Xanthomonas albilineans GPE
PC73]
gi|283473676|emb|CBA16179.1| probable small membrane lipoprotein a (smpa) [Xanthomonas
albilineans]
Length = 132
Score = 37.0 bits (84), Expect = 0.94, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 41/113 (36%), Gaps = 12/113 (10%)
Query: 15 LSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILH 74
L A+ + G + Y G + SA+ + G S+ V LGSPS
Sbjct: 4 LLLVAAIALSTAGCGIIY--KQPIYQGNLIKQSAVEQLKVGQSKEQVSALLGSPSIP--- 58
Query: 75 NGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPN 127
+ +Q + Y S ++ +I + + F E V+ + P+
Sbjct: 59 DPFHAQRWDYTSTERLDR---LGRTQIKNF----VVFFENDQVTRWEGDYFPD 104
>gi|161525905|ref|YP_001580917.1| SmpA/OmlA domain-containing protein [Burkholderia multivorans ATCC
17616]
gi|189349376|ref|YP_001945004.1| small protein A [Burkholderia multivorans ATCC 17616]
gi|160343334|gb|ABX16420.1| SmpA/OmlA domain protein [Burkholderia multivorans ATCC 17616]
gi|189333398|dbj|BAG42468.1| small protein A [Burkholderia multivorans ATCC 17616]
Length = 273
Score = 37.0 bits (84), Expect = 0.94, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 34/91 (37%), Gaps = 9/91 (9%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + + + G +R V LG+P + + + +R +Y +
Sbjct: 49 ITVVQGNFVSQEKAAQLQTGMTREQVRALLGTPLLTDMFHADRWDYLFYFKRG------- 101
Query: 96 FLSPKIMEYIVLKITFGEKGVVSSVSMERLP 126
S +++ L +TF + S E LP
Sbjct: 102 --STSVVQQRDLVLTFSGDRLASWTGAENLP 130
>gi|294338476|emb|CAZ86802.1| putative Small protein A (tmRNA-binding) SmpA [Thiomonas sp. 3As]
Length = 221
Score = 37.0 bits (84), Expect = 0.96, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 10/81 (12%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLS 98
I G + + G ++ V +G+P + N NR + Y S ++ +
Sbjct: 62 IQGNFVSREMAEELKPGMTKEQVQAIMGTPLLKTIFNQNRWE--YVFSLRQGYHA----- 114
Query: 99 PKIMEYIVLKITFGEKGVVSS 119
I+ + F + G +
Sbjct: 115 -PIVRR--YAVYFDKDGKMVR 132
>gi|304389016|ref|ZP_07371062.1| SmpA/OmlA family lipoprotein [Neisseria meningitidis ATCC 13091]
gi|304336997|gb|EFM03185.1| SmpA/OmlA family lipoprotein [Neisseria meningitidis ATCC 13091]
Length = 125
Score = 37.0 bits (84), Expect = 0.97, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 46/130 (35%), Gaps = 27/130 (20%)
Query: 17 FNKALFIIVIGLVVDYHVSY-----------GSISGASLDMSAISLVSQGSSRSHVIESL 65
NK L +I+ L+ S I G L+ A++ + G ++ V+ L
Sbjct: 1 MNKTLILILSALLGLAACSAERVSLFPSYKLKIIQGNELEPRAVAALRPGMTKDQVLLLL 60
Query: 66 GSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGE------KGVVSS 119
GSP + +R + S+ I E L + F +G V
Sbjct: 61 GSPMLRDAFHTDRWDYTFNTSRNGI----------IKERSNLTVYFENGVLVRTEGDVLQ 110
Query: 120 VSMERLPNRR 129
+ E L +R+
Sbjct: 111 NAAEALKDRQ 120
>gi|109898033|ref|YP_661288.1| SmpA/OmlA [Pseudoalteromonas atlantica T6c]
gi|109700314|gb|ABG40234.1| SmpA/OmlA [Pseudoalteromonas atlantica T6c]
Length = 118
Score = 36.6 bits (83), Expect = 0.99, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 27/69 (39%), Gaps = 3/69 (4%)
Query: 22 FIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQS 81
+++ D+ G LD +S + ++ V LG P + + +
Sbjct: 12 ASLMLSACADWIYRIDVPQGNFLDERDVSKLRINMTKEQVEYVLGKPVVEDSFDHD---T 68
Query: 82 FYYVSQKKK 90
+YY+ Q K+
Sbjct: 69 WYYLYQMKR 77
>gi|145628262|ref|ZP_01784063.1| small protein A [Haemophilus influenzae 22.1-21]
gi|145638359|ref|ZP_01793969.1| small protein A [Haemophilus influenzae PittII]
gi|145640945|ref|ZP_01796527.1| lysyl-tRNA synthetase [Haemophilus influenzae R3021]
gi|144980037|gb|EDJ89696.1| small protein A [Haemophilus influenzae 22.1-21]
gi|145272688|gb|EDK12595.1| small protein A [Haemophilus influenzae PittII]
gi|145274459|gb|EDK14323.1| lysyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
gi|309751500|gb|ADO81484.1| Putative small protein A -like protein [Haemophilus influenzae
R2866]
Length = 137
Score = 36.6 bits (83), Expect = 0.99, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 43/100 (43%), Gaps = 10/100 (10%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
AL + V G L+ + ++ V +G + V LG+P +L + +
Sbjct: 13 ALSLASCSTVEKVVYRIDVPQGNYLEATTVAQVKEGMTAQQVQYLLGTP---VLIDPYNN 69
Query: 80 QSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSS 119
++YYV +++ + +P L + F ++G+V+
Sbjct: 70 YTWYYVFLQQR----AYETPA---QHTLTVKFDQRGIVTE 102
>gi|325525171|gb|EGD03044.1| small protein A [Burkholderia sp. TJI49]
Length = 145
Score = 36.6 bits (83), Expect = 1.00, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 34/91 (37%), Gaps = 9/91 (9%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + + + G +R V LG+P + + + +R +Y +
Sbjct: 36 ITVVQGNFVSQEKAAQLQAGMTREQVRALLGTPLLTDMFHADRWDYLFYFKRG------- 88
Query: 96 FLSPKIMEYIVLKITFGEKGVVSSVSMERLP 126
S +++ L +TF + S E LP
Sbjct: 89 --STAVVQQRDLVLTFSGDRLTSWTGAENLP 117
>gi|238026211|ref|YP_002910442.1| outer membrane lipoprotein, SmpA/OmlA [Burkholderia glumae BGR1]
gi|237875405|gb|ACR27738.1| Outer membrane lipoprotein, SmpA/OmlA [Burkholderia glumae BGR1]
Length = 300
Score = 36.6 bits (83), Expect = 1.00, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 9/91 (9%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + + + G +R V LG+P + + + +R +Y +
Sbjct: 38 ITVVQGNFVSQEKAAQLQVGMTRDQVRTLLGTPLLTDMFHADRWDYLFYFKRG------- 90
Query: 96 FLSPKIMEYIVLKITFGEKGVVSSVSMERLP 126
S +++ L + F + S E LP
Sbjct: 91 --STSVVQQRDLVLHFQNDRLASWSGAENLP 119
>gi|186477340|ref|YP_001858810.1| SmpA/OmlA domain-containing protein [Burkholderia phymatum STM815]
gi|184193799|gb|ACC71764.1| SmpA/OmlA domain protein [Burkholderia phymatum STM815]
Length = 297
Score = 36.6 bits (83), Expect = 1.00, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 35/91 (38%), Gaps = 9/91 (9%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + A + + G SR+ V + LG+P + + + +R +Y +
Sbjct: 49 ITVVQGNFVSKEAAAQMQVGMSRAQVKQVLGTPLLTDMFHADRWDYVFYFKRG------- 101
Query: 96 FLSPKIMEYIVLKITFGEKGVVSSVSMERLP 126
S I++ + F V S E LP
Sbjct: 102 --STSIVQQRDFIVNFTGDRVASWSGGEDLP 130
>gi|124265415|ref|YP_001019419.1| small protein A (tmRNA-binding)-like protein [Methylibium
petroleiphilum PM1]
gi|124258190|gb|ABM93184.1| small protein A (tmRNA-binding)-like protein [Methylibium
petroleiphilum PM1]
Length = 183
Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 50/140 (35%), Gaps = 12/140 (8%)
Query: 5 LFLNNFFFGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIES 64
L L + G S ++ + GL+ Y V + G + + V G +R+ V ++
Sbjct: 14 LLLASVVLGGCSSMRSTSDRLFGLITPYRVEV--VQGNVVTQEMAAAVKPGMTRAQVRDT 71
Query: 65 LGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMER 124
LGSP + + + +R + + + + ++ + F + S + E
Sbjct: 72 LGSPLLADIFHADRWDYVFTI----RRPGAAYQQRRVT------VLFDGDTMKSFEADEL 121
Query: 125 LPNRRFNPNPHTIPAPIQTA 144
R F + T
Sbjct: 122 PSERDFVSSIDTKSTKGAKV 141
>gi|300114425|ref|YP_003761000.1| SmpA/OmlA domain-containing protein [Nitrosococcus watsonii C-113]
gi|299540362|gb|ADJ28679.1| SmpA/OmlA domain protein [Nitrosococcus watsonii C-113]
Length = 178
Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 48/154 (31%), Gaps = 27/154 (17%)
Query: 16 SFNKALFIIVIGLVVDYHVSYGSI---------SGASLDMSAISLVSQGSSRSHVIESLG 66
F +FI+ +V S + G + + +S G S+ V LG
Sbjct: 1 MFKLLIFIVGCASIVLSGCSIERLPGVYRIDVQQGNVITQEMLEKLSPGMSKQQVSFVLG 60
Query: 67 SPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGE------KGVVSSV 120
+P + +R Y + + + F E G V
Sbjct: 61 NPLLIDSFHPDRWYYIYSFKPGNERRK----------QRTITMWFEEGKLSYVGGDVEIG 110
Query: 121 SMERL-PNRRFNPNPHTIPAPIQTADGFLRRLLN 153
L RR P ++P P Q +G L L++
Sbjct: 111 PQRGLQQERREGPVSISVP-PRQEDEGLLGSLMD 143
>gi|289663020|ref|ZP_06484601.1| outer membrane protein [Xanthomonas campestris pv. vasculorum
NCPPB702]
gi|289670129|ref|ZP_06491204.1| outer membrane protein [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 131
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 36/112 (32%), Gaps = 11/112 (9%)
Query: 12 FGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFS 71
L A+ + G + Y G + +A+ + G S+ V LG+PS
Sbjct: 1 MRNLLLVAAVALSTAGCGIIY--KQPIYQGNLIKQTAVEQLQVGQSKQQVSALLGTPSIP 58
Query: 72 ILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSME 123
+ +Q + Y S ++ E + F + VV
Sbjct: 59 ---DPFHAQRWDYTSTQRVDRLAH------TEVKNFTVFFENEQVVRWEGDY 101
>gi|153828272|ref|ZP_01980939.1| small protein A [Vibrio cholerae 623-39]
gi|229530041|ref|ZP_04419431.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio cholerae 12129(1)]
gi|148876226|gb|EDL74361.1| small protein A [Vibrio cholerae 623-39]
gi|229333815|gb|EEN99301.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio cholerae 12129(1)]
Length = 136
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 24/79 (30%), Gaps = 6/79 (7%)
Query: 10 FFFGKLSFNKALFIIVIGLVVDYHV---SYGSISGASLDMSAISLVSQGSSRSHVIESLG 66
F K L + + G +D ++ + G S+ V LG
Sbjct: 18 MQFTKWFIALPLAVTALSGCSLLERLVYRIDINQGNYVDQQSVDQLKFGMSKDQVRFVLG 77
Query: 67 SPSFSILHNGNRSQSFYYV 85
SP ++YY+
Sbjct: 78 SPMLV---ENGYPDTWYYI 93
>gi|238920937|ref|YP_002934452.1| hypothetical protein NT01EI_3065 [Edwardsiella ictaluri 93-146]
gi|238870506|gb|ACR70217.1| SmpA/OmlA domain protein [Edwardsiella ictaluri 93-146]
Length = 116
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 44/90 (48%), Gaps = 11/90 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + ++ + +G ++ V +LG+P + S ++YYV +++ S
Sbjct: 34 QGNYLTATDVAKIHRGMTQQQVAYTLGTPLLQ---DPFGSSTWYYVFRQEP-------SH 83
Query: 100 KIMEYIVLKITFGEKGVVSSVSM-ERLPNR 128
+ + L +TF GV++++ ++LP+
Sbjct: 84 EGITQQTLTLTFNASGVLTNIENTKKLPDG 113
>gi|254443481|ref|ZP_05056957.1| hypothetical protein VDG1235_1717 [Verrucomicrobiae bacterium
DG1235]
gi|198257789|gb|EDY82097.1| hypothetical protein VDG1235_1717 [Verrucomicrobiae bacterium
DG1235]
Length = 145
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 36/79 (45%)
Query: 12 FGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFS 71
++ F ALF I+ ++ + S S ++ ++ +++GSS +I LG P
Sbjct: 1 MNRIQFVTALFTILTSALLTACNTTESPSASNAAGDSVLDIAKGSSTEDLIALLGEPKTI 60
Query: 72 ILHNGNRSQSFYYVSQKKK 90
+ G+ ++ + +K
Sbjct: 61 KAYEGDPENVTIWIYETEK 79
>gi|21230924|ref|NP_636841.1| outer membrane protein [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66769075|ref|YP_243837.1| outer membrane protein [Xanthomonas campestris pv. campestris str.
8004]
gi|188992199|ref|YP_001904209.1| Putative outer membrane protein [Xanthomonas campestris pv.
campestris str. B100]
gi|21112538|gb|AAM40765.1| outer membrane protein [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66574407|gb|AAY49817.1| outer membrane protein [Xanthomonas campestris pv. campestris str.
8004]
gi|167733959|emb|CAP52165.1| Putative outer membrane protein [Xanthomonas campestris pv.
campestris]
Length = 131
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 37/112 (33%), Gaps = 11/112 (9%)
Query: 12 FGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFS 71
L A+ + G + Y G + +A+ + G S+ V LG+PS
Sbjct: 1 MRNLLLVAAVALSTAGCGIIY--KQPIYQGNLIKQTAVEQLQVGQSKQQVSALLGTPSIP 58
Query: 72 ILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSME 123
+ +Q + Y S ++ + + + F + VV
Sbjct: 59 ---DPFHAQRWDYTSTQRVDRLAR------TDVKNFTVFFENEQVVRWEGDY 101
>gi|300718003|ref|YP_003742806.1| small protein A [Erwinia billingiae Eb661]
gi|299063839|emb|CAX60959.1| Putative small protein A [Erwinia billingiae Eb661]
Length = 116
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 37/91 (40%), Gaps = 12/91 (13%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYV-SQKKKWFPVKFLS 98
G L + +S + G ++ V +LG+P + S +YYV Q+ PV
Sbjct: 34 QGNYLVANDVSKIHTGMTQQQVAYTLGTPMMR---DPFGSNVWYYVFRQEPGHEPVT--- 87
Query: 99 PKIMEYIVLKITFGEKGVVSSVSMERLPNRR 129
L +TF G ++++ + + +
Sbjct: 88 -----QQTLTLTFDGSGTLTNIDNKPTLSGK 113
>gi|226946325|ref|YP_002801398.1| outer membrane lipoprotein OmlA [Azotobacter vinelandii DJ]
gi|22652760|gb|AAN03806.1|AF490983_6 outer membrane lipoprotein precursor OmlA [Azotobacter
vinelandii]
gi|226721252|gb|ACO80423.1| outer membrane lipoprotein OmlA [Azotobacter vinelandii DJ]
Length = 171
Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 6/67 (8%)
Query: 25 VIGLVVDYHVSYGSI------SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNR 78
++GL+ + + G + I + G +R V +GSP + + +R
Sbjct: 13 LVGLLALAGCTIPGVYKIDIQQGNVVTQDMIDQLRPGMTRRQVRFVMGSPLITDTFHPDR 72
Query: 79 SQSFYYV 85
Y +
Sbjct: 73 WDYLYSI 79
>gi|58581649|ref|YP_200665.1| outer membrane protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84623565|ref|YP_450937.1| outer membrane protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|166711481|ref|ZP_02242688.1| outer membrane protein [Xanthomonas oryzae pv. oryzicola BLS256]
gi|188577113|ref|YP_001914042.1| outer membrane protein [Xanthomonas oryzae pv. oryzae PXO99A]
gi|58426243|gb|AAW75280.1| outer membrane protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84367505|dbj|BAE68663.1| outer membrane protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188521565|gb|ACD59510.1| outer membrane protein [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 131
Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 36/112 (32%), Gaps = 11/112 (9%)
Query: 12 FGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFS 71
L A+ + G + Y G + +A+ + G S+ V LG+PS
Sbjct: 1 MRNLLLVAAVALSTAGCGIIY--KQPIYQGNLIKQTAVEQLQVGQSKQQVSALLGTPSIP 58
Query: 72 ILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSME 123
+ +Q + Y S ++ E + F + VV
Sbjct: 59 ---DPFHAQRWDYTSTQRVDRLAH------TEVKNFTVFFENEQVVRWEGDY 101
>gi|331005329|ref|ZP_08328716.1| outer membrane lipoprotein OmlA [gamma proteobacterium IMCC1989]
gi|330420868|gb|EGG95147.1| outer membrane lipoprotein OmlA [gamma proteobacterium IMCC1989]
Length = 107
Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 22/50 (44%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKK 89
G + ++ V+ G +R V LGSP N NR FY V KK
Sbjct: 33 QGNLVTEEKVNEVTTGMNRRQVQRILGSPLLVDTFNQNRWDYFYSVDTKK 82
>gi|229018876|ref|ZP_04175721.1| hypothetical protein bcere0030_33920 [Bacillus cereus AH1273]
gi|229025116|ref|ZP_04181543.1| hypothetical protein bcere0029_34200 [Bacillus cereus AH1272]
gi|228736226|gb|EEL86794.1| hypothetical protein bcere0029_34200 [Bacillus cereus AH1272]
gi|228742409|gb|EEL92564.1| hypothetical protein bcere0030_33920 [Bacillus cereus AH1273]
Length = 189
Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 9/76 (11%)
Query: 42 ASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKI 101
+D G S +I+ LG+P+ + + + YY+ ++ + P
Sbjct: 115 YMIDDLLKRHKLIGKSNEEIIKLLGAPTKTSSLKTGIT-TLYYLGNERSFIP-------- 165
Query: 102 MEYIVLKITFGEKGVV 117
++ L + F + G V
Sbjct: 166 IDSECLVLQFDKDGRV 181
>gi|327394857|dbj|BAK12279.1| small protein A precursor SmpA [Pantoea ananatis AJ13355]
Length = 104
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + ++ + G ++ V +LG+P + S +YYV +++
Sbjct: 22 QGNYLVANDVAKIHTGMTQQQVAYTLGTPMMK---DPFGSNVWYYVFREEPGH------- 71
Query: 100 KIMEYIVLKITFGEKGVVSSVSM 122
+ ++ L +TF GV++++
Sbjct: 72 EKVKQQTLTLTFDRSGVLTNIDN 94
>gi|145588418|ref|YP_001155015.1| SmpA/OmlA domain-containing protein [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
gi|145046824|gb|ABP33451.1| SmpA/OmlA domain protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 249
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 9/80 (11%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLS 98
+ G + + + G SR V + LG+P + + NR YV + K+
Sbjct: 65 VQGNFISSEQYAKLQLGMSREQVRQILGTPLLASYFHANRWD---YVFEFKRAGK----- 116
Query: 99 PKIMEYIVLKITFGEKGVVS 118
++ + + + F VV
Sbjct: 117 -RVGDERHVTVFFDGDKVVK 135
>gi|271499340|ref|YP_003332365.1| SmpA/OmlA domain-containing protein [Dickeya dadantii Ech586]
gi|270342895|gb|ACZ75660.1| SmpA/OmlA domain protein [Dickeya dadantii Ech586]
Length = 114
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + ++ + G ++ VI +LG+P + S ++YYV +++
Sbjct: 35 QGNYLAPADVAKIHNGMTKQQVIYTLGTPMLQ---DPFGSDTWYYVFRQQPGHEA----- 86
Query: 100 KIMEYIVLKITFGEKGVVSSVSM 122
++ L +TF +GV+++V
Sbjct: 87 --VKQQTLTLTFNSQGVLTNVDN 107
>gi|326793874|ref|YP_004311694.1| SmpA/OmlA domain-containing protein [Marinomonas mediterranea
MMB-1]
gi|326544638|gb|ADZ89858.1| SmpA/OmlA domain-containing protein [Marinomonas mediterranea
MMB-1]
Length = 105
Score = 36.2 bits (82), Expect = 1.3, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 36/108 (33%), Gaps = 8/108 (7%)
Query: 13 GKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSI 72
L ALF + ++ G + + ++ G + VI LG+P
Sbjct: 3 KTLLLVAALFTLNACSLLPEPYKVPVTQGNIIKQEQVEQLALGMTERQVIYVLGTPMVRD 62
Query: 73 LHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV 120
N + K + +E L +TF + GV+ ++
Sbjct: 63 TFAPNEWHYLF-----KSKYATSADKTSPIEQ--LTLTF-KDGVLINI 102
>gi|167571247|ref|ZP_02364121.1| outer membrane lipoprotein, putatitve [Burkholderia oklahomensis
C6786]
Length = 177
Score = 36.2 bits (82), Expect = 1.3, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 30/83 (36%), Gaps = 9/83 (10%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + S + G SR V LG+P + + + +R +Y +
Sbjct: 36 ITVVQGNFVSQEKASQLQAGMSRDQVRALLGTPLLTDMFHADRWDYIFYFKRG------- 88
Query: 96 FLSPKIMEYIVLKITFGEKGVVS 118
S +++ L + F + S
Sbjct: 89 --STSVVQQRDLVLNFSGDRLAS 109
>gi|209522357|ref|ZP_03270974.1| SmpA/OmlA domain protein [Burkholderia sp. H160]
gi|209497203|gb|EDZ97441.1| SmpA/OmlA domain protein [Burkholderia sp. H160]
Length = 181
Score = 36.2 bits (82), Expect = 1.3, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 32/91 (35%), Gaps = 9/91 (9%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + + G +R+ V + LG+P + + + +R +Y +
Sbjct: 73 ITVVQGNFVSQEMADQMKVGMTRAQVRQLLGTPLLTDMFHADRWDYVFYFKRG------- 125
Query: 96 FLSPKIMEYIVLKITFGEKGVVSSVSMERLP 126
+ I++ + F V E LP
Sbjct: 126 --NTSIVQQRDFVVFFSGDTVTHWTGGEDLP 154
>gi|149375774|ref|ZP_01893542.1| Small protein A (tmRNA-binding) [Marinobacter algicola DG893]
gi|149359899|gb|EDM48355.1| Small protein A (tmRNA-binding) [Marinobacter algicola DG893]
Length = 108
Score = 36.2 bits (82), Expect = 1.3, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 10/94 (10%)
Query: 21 LFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQ 80
L +I+ G V G L ++ +++G SRS V LG+P + + +R
Sbjct: 9 LTLIMAGCVFPGVYKINVQQGNILTDEELTSLAEGMSRSQVHSLLGTPLMTNPADPSRE- 67
Query: 81 SFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEK 114
YYV ++ I E V+ + +
Sbjct: 68 --YYVYTFQRSGG------DIKEQRVI-VYYDND 92
>gi|12744597|gb|AAK06706.1|AF317836_1 outer membrane lipoprotein [Burkholderia cenocepacia]
Length = 186
Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 30/83 (36%), Gaps = 9/83 (10%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + + + G +R V LG+P + + + +R +Y +
Sbjct: 49 ITVVQGNFVSQEKAAQLQAGMTREQVRALLGTPLLADMFHADRWDYLFYFKRG------- 101
Query: 96 FLSPKIMEYIVLKITFGEKGVVS 118
S I++ L + F V S
Sbjct: 102 --STSIVQQRDLVVNFSGDRVTS 122
>gi|15676831|ref|NP_273976.1| hypothetical protein NMB0938 [Neisseria meningitidis MC58]
gi|7226176|gb|AAF41344.1| hypothetical protein NMB0938 [Neisseria meningitidis MC58]
Length = 278
Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 13/89 (14%)
Query: 58 RSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK------------FLSPKIMEYI 105
R+ E +P++S HN +F Y+SQ + + + +
Sbjct: 188 RTRYFEVSATPAYSSRHNNGLGGNFQYISQLPGYLKIHGEMLENQSLFRLSNRERNPDKP 247
Query: 106 VLKITFGEKGVVSSVSMERLPNRRFNPNP 134
L I F E G ++ + + N FNPN
Sbjct: 248 FLDIHFDENGKITRIVVYE-KNIYFNPNT 275
>gi|21242267|ref|NP_641849.1| outer membrane protein [Xanthomonas axonopodis pv. citri str. 306]
gi|21107693|gb|AAM36385.1| outer membrane protein [Xanthomonas axonopodis pv. citri str. 306]
Length = 131
Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 37/112 (33%), Gaps = 11/112 (9%)
Query: 12 FGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFS 71
L A+ + G + Y G + +A+ + G S+ V LG+PS
Sbjct: 1 MRNLLLVAAVALSTAGCGIIY--KQPIYQGNLIKQNAVEQLQVGQSKQQVSALLGTPSIP 58
Query: 72 ILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSME 123
+ +Q + Y S ++ + E + F + VV
Sbjct: 59 ---DPFHAQRWDYTSTQRVDRLAR------TEIKNFTVFFENEQVVRWEGDY 101
>gi|325140171|gb|EGC62698.1| putative lipoprotein [Neisseria meningitidis CU385]
gi|325200376|gb|ADY95831.1| putative lipoprotein [Neisseria meningitidis H44/76]
Length = 278
Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 13/89 (14%)
Query: 58 RSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK------------FLSPKIMEYI 105
R+ E +P++S HN +F Y+SQ + + + +
Sbjct: 188 RTRYFEVSATPAYSSRHNNGLGGNFQYISQLPGYLKIHGEMLENQSLFRLSNRERNPDKP 247
Query: 106 VLKITFGEKGVVSSVSMERLPNRRFNPNP 134
L I F E G ++ + + N FNPN
Sbjct: 248 FLDIHFDENGKITRIVVYE-KNIYFNPNT 275
>gi|316985337|gb|EFV64286.1| lipoprotein [Neisseria meningitidis H44/76]
Length = 263
Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 13/89 (14%)
Query: 58 RSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK------------FLSPKIMEYI 105
R+ E +P++S HN +F Y+SQ + + + +
Sbjct: 173 RTRYFEVSATPAYSSRHNNGLGGNFQYISQLPGYLKIHGEMLENQSLFRLSNRERNPDKP 232
Query: 106 VLKITFGEKGVVSSVSMERLPNRRFNPNP 134
L I F E G ++ + + N FNPN
Sbjct: 233 FLDIHFDENGKITRIVVYE-KNIYFNPNT 260
>gi|117617809|ref|YP_855985.1| outer membrane lipoprotein OmlA [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117559216|gb|ABK36164.1| outer membrane lipoprotein OmlA [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 112
Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 39/117 (33%), Gaps = 12/117 (10%)
Query: 10 FFFGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPS 69
L + + G + Y + G ++ + + QG +R V LGS
Sbjct: 1 MRMKHLIAAALTALTLSGCSLVYRIDIP--QGNYVEQKQVDKLRQGMTREQVEFVLGSAM 58
Query: 70 FSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLP 126
+ N ++YY+ + + K E L +TF + + LP
Sbjct: 59 LRDGFDPN---TWYYLYEFQPGRGEK-------ERKELTLTFANDRLATVTGDFPLP 105
>gi|88860470|ref|ZP_01135108.1| hypothetical protein PTD2_15637 [Pseudoalteromonas tunicata D2]
gi|88817668|gb|EAR27485.1| hypothetical protein PTD2_15637 [Pseudoalteromonas tunicata D2]
Length = 115
Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 30/90 (33%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
+L +I ++ G L+ I + +R VI LG P N
Sbjct: 10 SLLLISASGCSNWVYRMNIPQGNFLEQKDIDKLRVEMTREQVIYVLGKPVAEDAFNNATW 69
Query: 80 QSFYYVSQKKKWFPVKFLSPKIMEYIVLKI 109
Y ++ + K L ++ ++ I
Sbjct: 70 HYIYLLNHGRDSELRKALQLHFVDNKLVSI 99
>gi|206561714|ref|YP_002232479.1| putative outer membrane protein [Burkholderia cenocepacia J2315]
gi|198037756|emb|CAR53700.1| putative outer membrane protein [Burkholderia cenocepacia J2315]
Length = 265
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 30/83 (36%), Gaps = 9/83 (10%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + + + G +R V LG+P + + + +R +Y +
Sbjct: 36 ITVVQGNFVSQEKAAQLQAGMTREQVRALLGTPLLADMFHADRWDYLFYFKRG------- 88
Query: 96 FLSPKIMEYIVLKITFGEKGVVS 118
S I++ L + F V S
Sbjct: 89 --STSIVQQRDLVVNFSGDRVTS 109
>gi|330815523|ref|YP_004359228.1| Outer membrane lipoprotein, SmpA/OmlA [Burkholderia gladioli BSR3]
gi|327367916|gb|AEA59272.1| Outer membrane lipoprotein, SmpA/OmlA [Burkholderia gladioli BSR3]
Length = 293
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 9/91 (9%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + S + G +R V LG+P + + + +R +Y +
Sbjct: 38 ITVVQGNFVSQEKASQLQAGMTREQVRALLGTPLLADMFHADRWDYLFYFKRG------- 90
Query: 96 FLSPKIMEYIVLKITFGEKGVVSSVSMERLP 126
S +++ L + F + S E LP
Sbjct: 91 --STSVVQQRDLVVHFQNDRLASWSGAENLP 119
>gi|253988753|ref|YP_003040109.1| hypothetical protein PAU_01272 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|211637922|emb|CAR66550.1| membrane protein-small protein a [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253780203|emb|CAQ83364.1| membrane protein-small protein a [Photorhabdus asymbiotica]
Length = 115
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + +S + +G ++ V +LG+P + +Q+++YV +++
Sbjct: 34 QGNYLTSANVSKIHKGMTQQQVAYTLGTPMLQ---DPFGTQTWFYVFRQQPGH------- 83
Query: 100 KIMEYIVLKITFGEKGVVSSVSME 123
+ + L +TF GV++ + E
Sbjct: 84 EKVTQQTLTLTFDSNGVLTDIKNE 107
>gi|262276580|ref|ZP_06054389.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Grimontia hollisae CIP 101886]
gi|262220388|gb|EEY71704.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Grimontia hollisae CIP 101886]
Length = 118
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 45/127 (35%), Gaps = 23/127 (18%)
Query: 19 KALFIIVIGLVVDYHVSYGS--------ISGASLDMSAISLVSQGSSRSHVIESLGSPSF 70
K + + L+ S+ + G +D +A+ + G ++ V LGSP
Sbjct: 4 KKIVTAALVLISLSGCSWANKLVYRIDINQGNYIDQNAVEELKFGMTKEQVKFLLGSPML 63
Query: 71 SILHNGNRSQSFYYVSQKKKWFPVKFLSP--KIMEYIVLKITFGEKG-VVSSVSMERLPN 127
+S Y K W+ V+++ P + E L ++F ++ + +
Sbjct: 64 V--------ESGY----PKTWYFVQYVKPGHEESEQKELILSFDNNSLLIGMKGDYQPSS 111
Query: 128 RRFNPNP 134
F
Sbjct: 112 GFFEVVQ 118
>gi|229844708|ref|ZP_04464847.1| lysyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
gi|229812422|gb|EEP48112.1| lysyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
Length = 137
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 40/102 (39%), Gaps = 14/102 (13%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
AL + V G L+ + ++ V +G + V LG+P +L + S
Sbjct: 13 ALSLASCSTVEKVVYRIDVPQGNYLEATTVAQVKEGMTAQQVQYLLGTP---VLVDPYNS 69
Query: 80 QSFYYV--SQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSS 119
Q++YYV Q+ PV L + F G+V+
Sbjct: 70 QTWYYVFLQQRAYETPV---------QHTLTVKFDPHGIVTE 102
>gi|294666515|ref|ZP_06731757.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|292603746|gb|EFF47155.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 131
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 36/112 (32%), Gaps = 11/112 (9%)
Query: 12 FGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFS 71
L A+ + G + Y G + +A+ + G S+ V LG+PS
Sbjct: 1 MRNLLLVAAVALSTAGCGIIY--KQPIYQGNLIKQNAVEQLQVGQSKQQVSALLGTPSIP 58
Query: 72 ILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSME 123
+ +Q + Y S ++ + E + F + V
Sbjct: 59 ---DPFHAQRWDYTSTQRVDRLAR------TEIKNFAVFFENEQVARWEGDY 101
>gi|239503171|ref|ZP_04662481.1| Outer membrane lipoprotein omlA precursor [Acinetobacter baumannii
AB900]
Length = 132
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 35/110 (31%), Gaps = 5/110 (4%)
Query: 12 FGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFS 71
KL + ++ G + G L + S V G + V LGSP+ +
Sbjct: 1 MQKLVLTLFVTSLLAGCSIFGVYKVDIPQGTPLTKAQASQVQVGMNFQQVRFLLGSPTVT 60
Query: 72 ILHNGNRSQSFY-YVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV 120
N R Y Y+ LKI F E G V+ +
Sbjct: 61 DPLNPQRWDYIYNYIPGTYAKKA----KIPAAHGQHLKIYFDETGTVTKI 106
>gi|294637630|ref|ZP_06715909.1| small protein A [Edwardsiella tarda ATCC 23685]
gi|291089185|gb|EFE21746.1| small protein A [Edwardsiella tarda ATCC 23685]
Length = 114
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 44/93 (47%), Gaps = 11/93 (11%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + ++ + +G ++ V +LG+P + S ++YYV +++ S
Sbjct: 30 QGNYLTAAEVAKIHRGMTQQQVAYTLGTPLLQ---DPFGSSTWYYVFRQEP-------SH 79
Query: 100 KIMEYIVLKITFGEKGVVSSVSM-ERLPNRRFN 131
+ + L +TF G+++ + ++LP+ +
Sbjct: 80 EGISQQTLTLTFNGNGILTGIDNSKKLPDADSD 112
>gi|145632197|ref|ZP_01787932.1| lysyl-tRNA synthetase [Haemophilus influenzae 3655]
gi|145634747|ref|ZP_01790455.1| small protein A [Haemophilus influenzae PittAA]
gi|145636600|ref|ZP_01792267.1| small protein A [Haemophilus influenzae PittHH]
gi|148826515|ref|YP_001291268.1| small protein A [Haemophilus influenzae PittEE]
gi|148828023|ref|YP_001292776.1| small protein A [Haemophilus influenzae PittGG]
gi|229845891|ref|ZP_04466003.1| lysyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
gi|329122845|ref|ZP_08251417.1| small A-like protein [Haemophilus aegyptius ATCC 11116]
gi|144987104|gb|EDJ93634.1| lysyl-tRNA synthetase [Haemophilus influenzae 3655]
gi|145267913|gb|EDK07909.1| small protein A [Haemophilus influenzae PittAA]
gi|145270126|gb|EDK10062.1| small protein A [Haemophilus influenzae PittHH]
gi|148716675|gb|ABQ98885.1| small protein A [Haemophilus influenzae PittEE]
gi|148719265|gb|ABR00393.1| lysyl-tRNA synthetase [Haemophilus influenzae PittGG]
gi|229810895|gb|EEP46612.1| lysyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
gi|309973670|gb|ADO96871.1| Putative small protein A -like protein [Haemophilus influenzae
R2846]
gi|327472109|gb|EGF17547.1| small A-like protein [Haemophilus aegyptius ATCC 11116]
Length = 137
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 40/102 (39%), Gaps = 14/102 (13%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
AL + V G L+ + ++ V +G + V LG+P +L + S
Sbjct: 13 ALSLASCSTVEKVVYRIDVPQGNYLEATTVAQVKEGMTAQQVQYLLGTP---VLVDPYNS 69
Query: 80 QSFYYV--SQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSS 119
Q++YYV Q+ PV L + F G+V+
Sbjct: 70 QTWYYVFLQQRAYETPV---------QHTLTVKFDPHGIVTE 102
>gi|120556273|ref|YP_960624.1| SmpA/OmlA domain-containing protein [Marinobacter aquaeolei VT8]
gi|120326122|gb|ABM20437.1| SmpA/OmlA domain protein [Marinobacter aquaeolei VT8]
Length = 110
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 20/111 (18%)
Query: 22 FIIVIGLVVDYHVSYGSI------SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHN 75
I++I ++ + + G + ++ +S+G RS V LG+P +
Sbjct: 6 AIVLISILSLSGCVFPGVYKINVQQGNIVTDEELTELSEGMPRSQVHALLGTPLMLNPVD 65
Query: 76 GNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLP 126
+R + F Y Q++ I E ++ + + +S
Sbjct: 66 PSR-EYFVYTFQRR--------GNDIEEQRII-VYYEND----QLSHYEAQ 102
>gi|107021727|ref|YP_620054.1| SmpA/OmlA [Burkholderia cenocepacia AU 1054]
gi|116688673|ref|YP_834296.1| SmpA/OmlA domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|170731970|ref|YP_001763917.1| SmpA/OmlA domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|105891916|gb|ABF75081.1| SmpA/OmlA [Burkholderia cenocepacia AU 1054]
gi|116646762|gb|ABK07403.1| SmpA/OmlA domain protein [Burkholderia cenocepacia HI2424]
gi|169815212|gb|ACA89795.1| SmpA/OmlA domain protein [Burkholderia cenocepacia MC0-3]
Length = 268
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 30/83 (36%), Gaps = 9/83 (10%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + + + G +R V LG+P + + + +R +Y +
Sbjct: 36 ITVVQGNFVSQEKAAQLQAGMTREQVRALLGTPLLADMFHADRWDYLFYFKRG------- 88
Query: 96 FLSPKIMEYIVLKITFGEKGVVS 118
S I++ L + F V S
Sbjct: 89 --STSIVQQRDLVVNFSGDRVAS 109
>gi|83311448|ref|YP_421712.1| hypothetical protein amb2349 [Magnetospirillum magneticum AMB-1]
gi|82946289|dbj|BAE51153.1| hypothetical protein [Magnetospirillum magneticum AMB-1]
Length = 57
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Query: 109 ITFGEKGVVSSVSMERLPNRR-FNPNPHTIPAPIQTADGFLRRLLNPNGR 157
+ F G V ++ L + + P P + L++L+ GR
Sbjct: 1 MVFDRAGTVRAIDNRGLEDGKDVVPAGRETPTAGKELT-ILQQLMGNVGR 49
>gi|301155679|emb|CBW15147.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
Length = 137
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 10/100 (10%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
AL + V G L+ + ++ V G + V LG+P +L + +
Sbjct: 13 ALSLTSCSTVQKVVYRIDVPQGNYLEAATVAQVKPGMTAQQVQYLLGTP---VLIDPYSN 69
Query: 80 QSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSS 119
++YYV ++ + P E + F + G+VSS
Sbjct: 70 LTWYYVFLQQH----SYQKP---EQHTFTVKFDQNGLVSS 102
>gi|325579098|ref|ZP_08149054.1| small protein A [Haemophilus parainfluenzae ATCC 33392]
gi|325159333|gb|EGC71467.1| small protein A [Haemophilus parainfluenzae ATCC 33392]
Length = 137
Score = 35.9 bits (81), Expect = 1.7, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 10/100 (10%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
AL + V G L+ S ++ V G + V LG+P +L + +
Sbjct: 13 ALSLTSCSTVQKVVYRIDVPQGNYLEASTVAQVKPGMTAQQVQYLLGTP---VLIDPYSN 69
Query: 80 QSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSS 119
++YYV ++ + P E + F + G+VSS
Sbjct: 70 LTWYYVFLQQH----SYQKP---EQHTFTVKFDQNGLVSS 102
>gi|229086247|ref|ZP_04218436.1| hypothetical protein bcere0022_28370 [Bacillus cereus Rock3-44]
gi|228697063|gb|EEL49859.1| hypothetical protein bcere0022_28370 [Bacillus cereus Rock3-44]
Length = 193
Score = 35.9 bits (81), Expect = 1.7, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 28/76 (36%), Gaps = 9/76 (11%)
Query: 42 ASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKI 101
+D G + +I+ LG P+ + +Q+ YY+ ++ + P
Sbjct: 119 YMIDDLLAKHKLVGKPKEEIIKLLGKPTETSRFE-EMNQTVYYLGDERGFIP-------- 169
Query: 102 MEYIVLKITFGEKGVV 117
++ L + F V
Sbjct: 170 IDSEWLILQFNSDNQV 185
>gi|71083729|ref|YP_266449.1| hypothetical protein SAR11_1039 [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062842|gb|AAZ21845.1| unknown [Candidatus Pelagibacter ubique HTCC1062]
Length = 154
Score = 35.9 bits (81), Expect = 1.8, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 40/106 (37%), Gaps = 7/106 (6%)
Query: 17 FNKALFIIVIGLVVDYHV---SYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSIL 73
K I+I L + L+ L S+++ +++ LGSPS
Sbjct: 1 MRKLFVFIIISLFISACTLKKVEKHHGVHFLNKKQEKLTVNQSNKNDILKLLGSPSTKST 60
Query: 74 HNGNRSQSFYYVSQKKKWFPVK-FLSPKIMEYIVLKITFGEKGVVS 118
+ + + Y+ +K + F S +I+ VL + G++
Sbjct: 61 FD---NDLWIYIERKTDNSSLAKFGSERIIVNNVLLLEINSMGLLE 103
>gi|291618461|ref|YP_003521203.1| SmpA [Pantoea ananatis LMG 20103]
gi|291153491|gb|ADD78075.1| SmpA [Pantoea ananatis LMG 20103]
Length = 104
Score = 35.9 bits (81), Expect = 1.8, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 36/83 (43%), Gaps = 10/83 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + ++ + G ++ V +LG+P + +YYV +++
Sbjct: 22 QGNYLVANDVAKIHTGMTQQQVAYTLGTPMMK---DPFGRNVWYYVFREEPGH------- 71
Query: 100 KIMEYIVLKITFGEKGVVSSVSM 122
+ ++ L +TF GV++++
Sbjct: 72 EKVKQQTLTLTFDRSGVLTNIDN 94
>gi|260776590|ref|ZP_05885485.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio coralliilyticus ATCC
BAA-450]
gi|260607813|gb|EEX34078.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio coralliilyticus ATCC
BAA-450]
Length = 119
Score = 35.9 bits (81), Expect = 1.8, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 31/82 (37%), Gaps = 10/82 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G ++ A+ + G ++ V +GSP +L ++YY+ +
Sbjct: 34 QGNYVEQQAVDQLKFGMTKEQVRFVMGSP---MLIENGYPDTWYYIYHHTEGHKDSVQKD 90
Query: 100 KIMEYIVLKITFGEKGVVSSVS 121
I+ F +KG + V+
Sbjct: 91 LIVN-------FNDKGQLVDVT 105
>gi|169634030|ref|YP_001707766.1| outer membrane lipoprotein [Acinetobacter baumannii SDF]
gi|169796925|ref|YP_001714718.1| outer membrane lipoprotein [Acinetobacter baumannii AYE]
gi|184157165|ref|YP_001845504.1| small protein A [Acinetobacter baumannii ACICU]
gi|213156672|ref|YP_002318333.1| outer membrane lipoprotein [Acinetobacter baumannii AB0057]
gi|215484387|ref|YP_002326618.1| Outer membrane lipoprotein omlA precursor [Acinetobacter baumannii
AB307-0294]
gi|260552480|ref|ZP_05825856.1| small protein A [Acinetobacter sp. RUH2624]
gi|260555785|ref|ZP_05828005.1| small protein A [Acinetobacter baumannii ATCC 19606]
gi|301345274|ref|ZP_07226015.1| Outer membrane lipoprotein omlA precursor [Acinetobacter baumannii
AB056]
gi|301510186|ref|ZP_07235423.1| Outer membrane lipoprotein omlA precursor [Acinetobacter baumannii
AB058]
gi|301595725|ref|ZP_07240733.1| Outer membrane lipoprotein omlA precursor [Acinetobacter baumannii
AB059]
gi|332853750|ref|ZP_08434962.1| SmpA / OmlA family protein [Acinetobacter baumannii 6013150]
gi|332871130|ref|ZP_08439728.1| SmpA / OmlA family protein [Acinetobacter baumannii 6013113]
gi|332874166|ref|ZP_08442090.1| SmpA / OmlA family protein [Acinetobacter baumannii 6014059]
gi|169149852|emb|CAM87743.1| outer membrane lipoprotein [Acinetobacter baumannii AYE]
gi|169152822|emb|CAP01849.1| outer membrane lipoprotein [Acinetobacter baumannii]
gi|183208759|gb|ACC56157.1| Small protein A (tmRNA-binding) [Acinetobacter baumannii ACICU]
gi|193076640|gb|ABO11326.2| outer membrane lipoprotein [Acinetobacter baumannii ATCC 17978]
gi|213055832|gb|ACJ40734.1| outer membrane lipoprotein [Acinetobacter baumannii AB0057]
gi|213987065|gb|ACJ57364.1| Outer membrane lipoprotein omlA precursor [Acinetobacter baumannii
AB307-0294]
gi|260405287|gb|EEW98783.1| small protein A [Acinetobacter sp. RUH2624]
gi|260410696|gb|EEX03994.1| small protein A [Acinetobacter baumannii ATCC 19606]
gi|322507062|gb|ADX02516.1| smpA [Acinetobacter baumannii 1656-2]
gi|323516929|gb|ADX91310.1| small protein A (tmRNA-binding) [Acinetobacter baumannii
TCDC-AB0715]
gi|332728436|gb|EGJ59811.1| SmpA / OmlA family protein [Acinetobacter baumannii 6013150]
gi|332731716|gb|EGJ62997.1| SmpA / OmlA family protein [Acinetobacter baumannii 6013113]
gi|332737641|gb|EGJ68544.1| SmpA / OmlA family protein [Acinetobacter baumannii 6014059]
Length = 132
Score = 35.9 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 34/110 (30%), Gaps = 5/110 (4%)
Query: 12 FGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFS 71
KL + ++ G + G L + S V G + V LGSP+ +
Sbjct: 1 MQKLVLTLFVTSLLAGCSIFGVYKVDIPQGTPLTKAQASQVQVGMNFQQVRFLLGSPTVT 60
Query: 72 ILHNGNRSQSFY-YVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV 120
N R Y Y+ LKI F G V+ +
Sbjct: 61 DPLNPQRWDYIYNYIPGTYAKKA----KIPAAHGQHLKIYFDGTGTVTKI 106
>gi|27363837|ref|NP_759365.1| outer membrane lipoprotein SmpA [Vibrio vulnificus CMCP6]
gi|320157241|ref|YP_004189620.1| outer membrane lipoprotein SmpA [Vibrio vulnificus MO6-24/O]
gi|27359954|gb|AAO08892.1| Outer membrane lipoprotein SmpA, a component of the essential YaeT
outer-membrane protein assembly complex [Vibrio
vulnificus CMCP6]
gi|319932553|gb|ADV87417.1| outer membrane lipoprotein SmpA, a component of the essential YaeT
outer-membrane protein assembly complex [Vibrio
vulnificus MO6-24/O]
Length = 119
Score = 35.9 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 31/82 (37%), Gaps = 10/82 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G ++ A+ + G +++ V +GSP +L ++YY+ +
Sbjct: 34 QGNYVEQQAVDKLKFGMTKAQVRFVMGSP---MLIENGYPNTWYYIYHHTEGHKESIQKN 90
Query: 100 KIMEYIVLKITFGEKGVVSSVS 121
I+ F + G + ++
Sbjct: 91 LIVN-------FNDDGTLVDIA 105
>gi|326915286|ref|XP_003203950.1| PREDICTED: prolyl endopeptidase-like [Meleagris gallopavo]
Length = 732
Score = 35.9 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 22/68 (32%), Gaps = 4/68 (5%)
Query: 73 LHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRF-- 130
+ YY SQK FL K+ + E+ V + +RRF
Sbjct: 222 SFEWATNDVLYYTSQKNLKCQNVFL-TTFTNQKYTKLVYTEQDARFFVDIYCTKDRRFLT 280
Query: 131 -NPNPHTI 137
N N T
Sbjct: 281 INSNSKTT 288
>gi|74317142|ref|YP_314882.1| hypothetical protein Tbd_1124 [Thiobacillus denitrificans ATCC
25259]
gi|74056637|gb|AAZ97077.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
25259]
Length = 342
Score = 35.9 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 10/75 (13%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G +LD +S + G +RS V LG+P G+R Y V + +
Sbjct: 31 QGNALDQENVSRLKPGLNRSQVRFLLGTPLVVDPFRGDRWDYVY----------VYYKAG 80
Query: 100 KIMEYIVLKITFGEK 114
K+ E + + F
Sbjct: 81 KLAEQKRITLHFDGD 95
>gi|325202964|gb|ADY98418.1| lipoprotein, SmpA/OmlA family [Neisseria meningitidis M01-240149]
gi|325207238|gb|ADZ02690.1| lipoprotein, SmpA/OmlA family [Neisseria meningitidis NZ-05/33]
Length = 125
Score = 35.9 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 48/135 (35%), Gaps = 21/135 (15%)
Query: 1 MKKILFLNNFFFGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSH 60
M K L L L A + + L Y + I G L+ A++ + G ++
Sbjct: 1 MNKTLIL---VLSALFSLTACSVERVSLFPSYKLKI--IQGNELEPRAVAALRPGMTKDQ 55
Query: 61 VIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGE------K 114
V+ LGSP + +R + S+ I E L + F +
Sbjct: 56 VLLLLGSPMLRDAFHTDRWDYTFNTSRNGI----------IKERSNLTVYFENGVLVRTE 105
Query: 115 GVVSSVSMERLPNRR 129
G V + E L +R+
Sbjct: 106 GDVLQNAAEALKDRQ 120
>gi|229061247|ref|ZP_04198597.1| hypothetical protein bcere0026_33380 [Bacillus cereus AH603]
gi|228718118|gb|EEL69758.1| hypothetical protein bcere0026_33380 [Bacillus cereus AH603]
Length = 189
Score = 35.9 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 29/76 (38%), Gaps = 9/76 (11%)
Query: 42 ASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKI 101
+D G S +I+ LG+P+ + + + YY+ ++ + P
Sbjct: 115 YMIDDLLKRHKLIGKSNEEIIKLLGAPTKTSSLETGIT-TLYYLGNERGFIP-------- 165
Query: 102 MEYIVLKITFGEKGVV 117
++ L + F G V
Sbjct: 166 IDSECLVLQFDRDGRV 181
>gi|78047115|ref|YP_363290.1| putative outer membrane protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325928718|ref|ZP_08189888.1| small protein A (tmRNA-binding) [Xanthomonas perforans 91-118]
gi|78035545|emb|CAJ23191.1| putative outer membrane protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325540886|gb|EGD12458.1| small protein A (tmRNA-binding) [Xanthomonas perforans 91-118]
Length = 131
Score = 35.9 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 36/108 (33%), Gaps = 12/108 (11%)
Query: 12 FGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFS 71
L A+ + G + Y G + +A+ + G S+ V LG+PS
Sbjct: 1 MRNLLLVAAIALSTAGCGIIY--KQPIYQGNLIKQNAVEQLQVGQSKQQVSALLGTPSIP 58
Query: 72 ILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSS 119
+ R Y +Q+ +I + V F E V+
Sbjct: 59 DPFHAQRWD--YTSTQRVDRLA----RTEIKNFTV----FFENEQVAR 96
>gi|37679005|ref|NP_933614.1| small protein A [Vibrio vulnificus YJ016]
gi|37197747|dbj|BAC93585.1| small protein A [Vibrio vulnificus YJ016]
Length = 119
Score = 35.9 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 31/82 (37%), Gaps = 10/82 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G ++ A+ + G +++ V +GSP +L ++YY+ +
Sbjct: 34 QGNYVEQQAVDKLKFGMTKAQVRFVMGSP---MLIENGYPNTWYYIYHHTEGHKESIQKN 90
Query: 100 KIMEYIVLKITFGEKGVVSSVS 121
I+ F + G + ++
Sbjct: 91 LIVN-------FNDDGTLVDIA 105
>gi|269791733|ref|YP_003316637.1| hypothetical protein Taci_0115 [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269099368|gb|ACZ18355.1| Tetratricopeptide domain protein [Thermanaerovibrio acidaminovorans
DSM 6589]
Length = 409
Score = 35.9 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 9/93 (9%)
Query: 43 SLDMSAISLVSQGSSRSHVIESLGSPSFSILHN--GNRSQSFYYVSQKKKWFPVKFLSPK 100
+ ++ V G SR V+E+LG P+ S + G + + Y S K P
Sbjct: 246 VVPGRSLGPVEIGMSRDQVLETLGEPNGSDGLDVSGRAYEVWTYNSVTLKDQPG------ 299
Query: 101 IMEYIVLKITFGEKGVVSSVSMERLPNRRFNPN 133
++Y L+I F G V V + ++
Sbjct: 300 -VKYPGLRILFDPTGTVVQVESSSDRYKTYDGI 331
>gi|319953876|ref|YP_004165143.1| anthranilate synthase, component ii [Cellulophaga algicola DSM
14237]
gi|319422536|gb|ADV49645.1| anthranilate synthase, component II [Cellulophaga algicola DSM
14237]
Length = 188
Score = 35.9 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 45/130 (34%), Gaps = 9/130 (6%)
Query: 26 IGLVVDYHVSYGSIS---GASLDMSAISLVSQGS--SRSHVIESLGSPSFSILHNGNRSQ 80
GL+ D +Y G L AI+ V GS + V + +P +
Sbjct: 59 AGLLKDIIRTYAPTKKIFGVCLGQQAIAEVFGGSLINLEQVYHGIATPITITQEDALFKD 118
Query: 81 SFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSM--ERLPNRRFNPNPHTIP 138
+ K + ++PK + V+ +F G + S+ + +F+P P
Sbjct: 119 LPSEI--KVGRYHSWVVNPKDLPNSVIATSFDINGQIMSLRHTTYDVSAVQFHPESVLTP 176
Query: 139 APIQTADGFL 148
+ +L
Sbjct: 177 DGKKILQNWL 186
>gi|168185818|ref|ZP_02620453.1| conserved hypothetical protein [Clostridium botulinum C str.
Eklund]
gi|169295979|gb|EDS78112.1| conserved hypothetical protein [Clostridium botulinum C str.
Eklund]
Length = 443
Score = 35.9 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 43/114 (37%), Gaps = 13/114 (11%)
Query: 14 KLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSIL 73
++ AL + V + VD S+ ++ +S V S+ ++ +GS + +
Sbjct: 206 QMISKAALSMDVKFITVDPGPFTASVVNEIINNKKVSYV--NSNNKKILMCVGSITNTTK 263
Query: 74 HNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPN 127
+ + +K + K+ +L ++ +S ++ E L N
Sbjct: 264 TQLEKLE-----------KDMKLIKAKVCTQKLLNTDEEKEKEISRIANEILQN 306
>gi|224825733|ref|ZP_03698837.1| SmpA/OmlA domain protein [Lutiella nitroferrum 2002]
gi|224601957|gb|EEG08136.1| SmpA/OmlA domain protein [Lutiella nitroferrum 2002]
Length = 128
Score = 35.9 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 11/90 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G + A++ + G +RS V LG+P + + NR K+ V+ P
Sbjct: 33 QGNYVTQDAVAKLKPGMTRSQVRFLLGTPLLTDAFHSNRWDY--------KYRLVRAGKP 84
Query: 100 KIMEYIVLKITFGEKGVVSSVSMERLPNRR 129
E +L + F ++ V E LP R
Sbjct: 85 --AEDKLLTVFFDGDA-MTRVEGEALPAER 111
>gi|28199259|ref|NP_779573.1| outer membrane protein [Xylella fastidiosa Temecula1]
gi|28057365|gb|AAO29222.1| outer membrane protein [Xylella fastidiosa Temecula1]
Length = 145
Score = 35.5 bits (80), Expect = 2.2, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 10/80 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G + A+ + G ++ V LG+PS S + + +R Y S ++
Sbjct: 43 QGNLIKKEAVDQLKIGMNKQEVAMLLGTPSISDIFHTDRWD---YTSTQRINRVAH---- 95
Query: 100 KIMEYIVLKITFGEKGVVSS 119
E L + F + +V+
Sbjct: 96 --TEIKNLTVYF-QNDLVTR 112
>gi|71276144|ref|ZP_00652424.1| SmpA/OmlA [Xylella fastidiosa Dixon]
gi|71898355|ref|ZP_00680528.1| SmpA/OmlA [Xylella fastidiosa Ann-1]
gi|170730629|ref|YP_001776062.1| outer membrane protein [Xylella fastidiosa M12]
gi|182681985|ref|YP_001830145.1| SmpA/OmlA domain-containing protein [Xylella fastidiosa M23]
gi|71163062|gb|EAO12784.1| SmpA/OmlA [Xylella fastidiosa Dixon]
gi|71731878|gb|EAO33936.1| SmpA/OmlA [Xylella fastidiosa Ann-1]
gi|167965422|gb|ACA12432.1| outer membrane protein [Xylella fastidiosa M12]
gi|182632095|gb|ACB92871.1| SmpA/OmlA domain protein [Xylella fastidiosa M23]
gi|307578250|gb|ADN62219.1| outer membrane protein [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 130
Score = 35.5 bits (80), Expect = 2.2, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 10/80 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G + A+ + G ++ V LG+PS S + + +R Y S ++
Sbjct: 28 QGNLIKKEAVDQLKIGMNKQEVAMLLGTPSISDIFHTDRWD---YTSTQRINRVAH---- 80
Query: 100 KIMEYIVLKITFGEKGVVSS 119
E L + F + +V+
Sbjct: 81 --TEIKNLTVYF-QNDLVTR 97
>gi|238753939|ref|ZP_04615299.1| hypothetical protein yruck0001_7140 [Yersinia ruckeri ATCC 29473]
gi|238707927|gb|EEQ00285.1| hypothetical protein yruck0001_7140 [Yersinia ruckeri ATCC 29473]
Length = 88
Score = 35.5 bits (80), Expect = 2.3, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 38/83 (45%), Gaps = 10/83 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + +S + +G ++ V +LG+P + +Q+++YV +++
Sbjct: 9 QGNYLSPNDVSKIHKGMTQQQVAYTLGTPMLE---DPFGTQTWFYVFRQQPGH------- 58
Query: 100 KIMEYIVLKITFGEKGVVSSVSM 122
+ + L +TF GV++ +
Sbjct: 59 EKVTQQTLTLTFDNSGVLTDIKN 81
>gi|325129004|gb|EGC51854.1| lipoprotein, SmpA/OmlA family [Neisseria meningitidis N1568]
Length = 125
Score = 35.5 bits (80), Expect = 2.3, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 36/97 (37%), Gaps = 16/97 (16%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLS 98
I G L+ A++ + G ++ V+ LGSP +R + S+
Sbjct: 34 IQGNELEPRAVAALRPGMTKDQVLLLLGSPILRDAFPTDRWDYTFNTSRNGI-------- 85
Query: 99 PKIMEYIVLKITFGE------KGVVSSVSMERLPNRR 129
I E L + F +G V + E L +R+
Sbjct: 86 --IKERSNLTVYFENGVLVRTEGDVLQNAAEALKDRQ 120
>gi|197335262|ref|YP_002156830.1| small protein A [Vibrio fischeri MJ11]
gi|197316752|gb|ACH66199.1| small protein A [Vibrio fischeri MJ11]
Length = 118
Score = 35.5 bits (80), Expect = 2.3, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 38/126 (30%), Gaps = 14/126 (11%)
Query: 10 FFFGKLSFNKALFIIVIGLVVDYHV---SYGSISGASLDMSAISLVSQGSSRSHVIESLG 66
F K L + ++G G ++ A+ + G ++ V +G
Sbjct: 1 MQFKKWIIALPLAVGLLGGCSLLEPLVYRIDIAQGNYVEQEAVDKLRFGMTKQQVQFVMG 60
Query: 67 SPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV-SMERL 125
SP ++YY+ L + F + G ++++ +
Sbjct: 61 SPMLV---ESGYPNTWYYIYHFTHGHEKAI-------QKNLIVHFDDNGNLTNMEGDFPM 110
Query: 126 PNRRFN 131
+ F
Sbjct: 111 SDSFFE 116
>gi|325914031|ref|ZP_08176387.1| small protein A (tmRNA-binding) [Xanthomonas vesicatoria ATCC
35937]
gi|325539800|gb|EGD11440.1| small protein A (tmRNA-binding) [Xanthomonas vesicatoria ATCC
35937]
Length = 131
Score = 35.5 bits (80), Expect = 2.4, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 36/108 (33%), Gaps = 12/108 (11%)
Query: 12 FGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFS 71
L A+ + G + Y G + +A+ + G S+ V LG+PS
Sbjct: 1 MRNLLLVAAVALSTAGCGIIY--KQPIYQGNLIKQNAVEQLQVGQSKQQVSALLGTPSIP 58
Query: 72 ILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSS 119
+ R Y +Q+ ++ + V F E V+
Sbjct: 59 DPFHAQRWD--YTSTQRVDRLA----RTEVKNFTV----FFENDQVAR 96
>gi|322834143|ref|YP_004214170.1| SmpA/OmlA domain-containing protein [Rahnella sp. Y9602]
gi|321169344|gb|ADW75043.1| SmpA/OmlA domain-containing protein [Rahnella sp. Y9602]
Length = 116
Score = 35.5 bits (80), Expect = 2.4, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 36/83 (43%), Gaps = 10/83 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + + + G ++ V LG+P +LH+ S +YYV +++
Sbjct: 36 QGNYLSPADVQKIHTGMTKQQVAYVLGTP---MLHDPFGSNVWYYVFRQEPGH------- 85
Query: 100 KIMEYIVLKITFGEKGVVSSVSM 122
+ + L +TF E ++++
Sbjct: 86 EGITQQTLTLTFNESDTLTNIDN 108
>gi|296134541|ref|YP_003641783.1| SmpA/OmlA domain protein [Thiomonas intermedia K12]
gi|295794663|gb|ADG29453.1| SmpA/OmlA domain protein [Thiomonas intermedia K12]
Length = 221
Score = 35.5 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 30/81 (37%), Gaps = 10/81 (12%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLS 98
I G + + G ++ V +G+P + N NR + + + Q + +
Sbjct: 62 IQGNFVSREMAEELKPGMTKEQVQAIMGTPLLKTIFNQNRWEYVFSLRQ-------GYHA 114
Query: 99 PKIMEYIVLKITFGEKGVVSS 119
P + Y V F + G +
Sbjct: 115 PIVRRYTV---YFDKDGKMVR 132
>gi|145630587|ref|ZP_01786367.1| lysyl-tRNA synthetase [Haemophilus influenzae R3021]
gi|144983977|gb|EDJ91419.1| lysyl-tRNA synthetase [Haemophilus influenzae R3021]
Length = 151
Score = 35.5 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 39/102 (38%), Gaps = 14/102 (13%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
AL + V G L+ + ++ V +G + V LG+P IL + +
Sbjct: 13 ALSLASCSTVEKVVYRIDVPQGNYLEATTVAQVKEGMTSQQVQYLLGTP---ILIDPYNN 69
Query: 80 QSFYYV--SQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSS 119
++YYV Q+ PV L + F G+V+
Sbjct: 70 YTWYYVFLQQRAYETPV---------QHTLTVKFDPHGIVTE 102
>gi|187925357|ref|YP_001896999.1| SmpA/OmlA domain protein [Burkholderia phytofirmans PsJN]
gi|187716551|gb|ACD17775.1| SmpA/OmlA domain protein [Burkholderia phytofirmans PsJN]
Length = 276
Score = 35.5 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 9/91 (9%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + A + + G SR+ V + LG+P + + + +R +Y +
Sbjct: 36 ITVVQGNFVSKEAAAQMQVGLSRAQVKQLLGTPLLTDMFHADRWDYVFYFKRG------- 88
Query: 96 FLSPKIMEYIVLKITFGEKGVVSSVSMERLP 126
S +++ + F V S E LP
Sbjct: 89 --STSVVQQRDFVVMFAGDRVASWSGGEDLP 117
>gi|194290702|ref|YP_002006609.1| outer membrane lipoprotein, smpa/omla family [Cupriavidus
taiwanensis LMG 19424]
gi|193224537|emb|CAQ70548.1| putative outer membrane lipoprotein, SmpA/OmlA family [Cupriavidus
taiwanensis LMG 19424]
Length = 212
Score = 35.5 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 32/80 (40%), Gaps = 9/80 (11%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLS 98
+ G + A S + +G +R V LG+P + + + NR Y S ++ +
Sbjct: 49 VQGNFVSREAASQLREGMTRDQVKFLLGTPLLTDVFHANRWD--YVFSFRRG-------N 99
Query: 99 PKIMEYIVLKITFGEKGVVS 118
+++ + F +V
Sbjct: 100 TSVVQQRRYTVFFDGDRLVK 119
>gi|329961807|ref|ZP_08299821.1| hypothetical protein HMPREF9446_01391 [Bacteroides fluxus YIT
12057]
gi|328531247|gb|EGF58091.1| hypothetical protein HMPREF9446_01391 [Bacteroides fluxus YIT
12057]
Length = 146
Score = 35.5 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 40/105 (38%), Gaps = 18/105 (17%)
Query: 19 KALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNR 78
K + ++++ V+ G G D + +S + +G S V LG P+F
Sbjct: 2 KKISVLLLLTVLMGC---GVYGGYGFDYAQLSSIERGMSFKEVTAVLGEPAFRDFD---- 54
Query: 79 SQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSME 123
K+ F + + + V+K+ F ++G V +
Sbjct: 55 ----------KEREAWTFRALGMQGWSVVKVWF-KEGKVVEMKSY 88
>gi|261252214|ref|ZP_05944787.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio orientalis CIP 102891]
gi|260935605|gb|EEX91594.1| lipoprotein SmpA a component of the essential YaeT outer-membrane
protein assembly complex [Vibrio orientalis CIP 102891]
Length = 119
Score = 35.5 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 28/82 (34%), Gaps = 10/82 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G ++ SA+ + G ++ V +GSP ++YY+ +
Sbjct: 34 QGNYVEQSAVEQLKFGMTKEQVRYVMGSPMLV---ENGYPDTWYYIYHHTEGHSDSIQKN 90
Query: 100 KIMEYIVLKITFGEKGVVSSVS 121
I+ F G + ++
Sbjct: 91 LIVN-------FNGNGQLVDIT 105
>gi|113869096|ref|YP_727585.1| lipoprotein [Ralstonia eutropha H16]
gi|113527872|emb|CAJ94217.1| Lipoprotein [Ralstonia eutropha H16]
Length = 207
Score = 35.5 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 33/80 (41%), Gaps = 9/80 (11%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLS 98
+ G + A+S + +G +R V LG+P + + + NR Y S ++ PV
Sbjct: 49 VQGNFVSREAVSQLREGMTRDQVKFLLGTPLLNDVFHANRWD--YVFSFRRGNTPV---- 102
Query: 99 PKIMEYIVLKITFGEKGVVS 118
++ + F +V
Sbjct: 103 ---VQQRRFTVFFEGDRLVK 119
>gi|262280018|ref|ZP_06057803.1| outer membrane lipoprotein omlA [Acinetobacter calcoaceticus
RUH2202]
gi|299771282|ref|YP_003733308.1| Outer membrane lipoprotein omlA precursor [Acinetobacter sp. DR1]
gi|262260369|gb|EEY79102.1| outer membrane lipoprotein omlA [Acinetobacter calcoaceticus
RUH2202]
gi|298701370|gb|ADI91935.1| Outer membrane lipoprotein omlA precursor [Acinetobacter sp. DR1]
Length = 132
Score = 35.5 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 27/82 (32%), Gaps = 5/82 (6%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFY-YVSQKKKWFPVKFLS 98
G L + S V G + V LGSP+ + N R Y Y+
Sbjct: 29 QGTPLTKAQASQVQVGMNFQQVRFLLGSPTVTDPLNPQRWDYIYNYIPGTYAKKA----K 84
Query: 99 PKIMEYIVLKITFGEKGVVSSV 120
LKI F G V+ +
Sbjct: 85 IPAAHGQHLKIYFDGTGTVTKI 106
>gi|325145397|gb|EGC67674.1| lipoprotein, SmpA/OmlA family [Neisseria meningitidis M01-240013]
Length = 125
Score = 35.5 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 16/97 (16%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLS 98
I G L+ A++ + G ++ V+ LGSP + +R + S+
Sbjct: 34 IQGNELEPRAVASLRPGMTKDQVLLLLGSPILRDAFHTDRWDYTFNTSRNGI-------- 85
Query: 99 PKIMEYIVLKITFGE------KGVVSSVSMERLPNRR 129
I E L + F +G V + E L +R+
Sbjct: 86 --IKERSNLTVYFENGVLVRTEGDVLQNAAEALKDRQ 120
>gi|323527348|ref|YP_004229501.1| SmpA/OmlA domain-containing protein [Burkholderia sp. CCGE1001]
gi|323384350|gb|ADX56441.1| SmpA/OmlA domain-containing protein [Burkholderia sp. CCGE1001]
Length = 278
Score = 35.1 bits (79), Expect = 2.9, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 9/91 (9%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + A + + G SR+ V + LG+P + + + +R +Y +
Sbjct: 36 ITVVQGNFVSKEAAAQMQVGMSRAQVRQLLGTPLLTDMFHADRWDYVFYFKRG------- 88
Query: 96 FLSPKIMEYIVLKITFGEKGVVSSVSMERLP 126
S +++ + F V S E LP
Sbjct: 89 --STNVVQQRDFVVMFAGDRVASWSGGEDLP 117
>gi|283786236|ref|YP_003366101.1| outer membrane assembly lipoprotein [Citrobacter rodentium ICC168]
gi|282949690|emb|CBG89309.1| putative outer membrane assembly lipoprotein [Citrobacter rodentium
ICC168]
Length = 114
Score = 35.1 bits (79), Expect = 3.0, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 10/83 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + +S V G ++ V +LG+P S + FY Q+ V
Sbjct: 34 QGNYLTANDVSKVRVGMTQQQVAYALGTPMMSDPF--GTNTWFYVFRQQPGHEGVT---- 87
Query: 100 KIMEYIVLKITFGEKGVVSSVSM 122
L +TF GV++++
Sbjct: 88 ----QQTLTLTFNSNGVLTNIDN 106
>gi|119471582|ref|ZP_01613996.1| hypothetical protein ATW7_09721 [Alteromonadales bacterium TW-7]
gi|119445525|gb|EAW26811.1| hypothetical protein ATW7_09721 [Alteromonadales bacterium TW-7]
Length = 119
Score = 35.1 bits (79), Expect = 3.0, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 38/121 (31%), Gaps = 10/121 (8%)
Query: 15 LSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILH 74
L AL + + G L+ S + + +R VI LG P +
Sbjct: 9 LWLIVALTLSSAAGCSSWVYRINIPQGNFLEQSDVEKLRVNMTRDQVIYVLGRPIATDAF 68
Query: 75 NGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNP 134
+ N + Y ++ ++ ++ L I F + +VS P P
Sbjct: 69 DNNTWRYVYSFNKGRENE----------QHKELVINFENEKLVSLSGDYDQPENFNTPLE 118
Query: 135 H 135
Sbjct: 119 Q 119
>gi|260579930|ref|ZP_05847760.1| small protein A [Haemophilus influenzae RdAW]
gi|8039800|sp|P44057|SMPA_HAEIN RecName: Full=Small protein A homolog; Flags: Precursor
gi|260093214|gb|EEW77147.1| small protein A [Haemophilus influenzae RdAW]
Length = 137
Score = 35.1 bits (79), Expect = 3.0, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 41/102 (40%), Gaps = 14/102 (13%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
AL + V G L+ + ++ V +G + V LG+P +L + S
Sbjct: 13 ALSLASCSTVEKVVYRIDVPQGNYLEATTVAQVKEGMTAQQVQYLLGTP---VLVDPYNS 69
Query: 80 QSFYYV--SQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSS 119
Q++YYV Q+ PV + F ++G+V+
Sbjct: 70 QTWYYVFLQQRAYETPV---------QHTFTVKFDQRGIVTE 102
>gi|264680776|ref|YP_003280686.1| SmpA/OmlA [Comamonas testosteroni CNB-2]
gi|299529345|ref|ZP_07042783.1| SmpA/OmlA [Comamonas testosteroni S44]
gi|262211292|gb|ACY35390.1| SmpA/OmlA [Comamonas testosteroni CNB-2]
gi|298722594|gb|EFI63513.1| SmpA/OmlA [Comamonas testosteroni S44]
Length = 181
Score = 35.1 bits (79), Expect = 3.1, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 30/80 (37%), Gaps = 12/80 (15%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLS 98
+ G + + + G SR + + LG+P + + +G+R + + ++
Sbjct: 46 VQGNFVSKEQVEALQPGMSRQQIRDILGTPLVTSVFHGDRWEYVFTIN-----------R 94
Query: 99 PKIMEY-IVLKITFGEKGVV 117
P + L + F V
Sbjct: 95 PGVESQIRKLTVFFNGDAFV 114
>gi|251790875|ref|YP_003005596.1| hypothetical protein Dd1591_3299 [Dickeya zeae Ech1591]
gi|247539496|gb|ACT08117.1| SmpA/OmlA domain protein [Dickeya zeae Ech1591]
Length = 114
Score = 35.1 bits (79), Expect = 3.1, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L ++ + G ++ VI +LG+P + S ++YYV +++
Sbjct: 35 QGNYLSSVDVAKIHNGMTKQQVIYTLGTPMLQ---DPFGSDTWYYVFRQQPGH------- 84
Query: 100 KIMEYIVLKITFGEKGVVSSVSM 122
+ ++ L +TF +GV+++V
Sbjct: 85 QAVKQQTLTLTFNSQGVLANVDN 107
>gi|167586111|ref|ZP_02378499.1| SmpA/OmlA domain protein [Burkholderia ubonensis Bu]
Length = 265
Score = 35.1 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 31/83 (37%), Gaps = 9/83 (10%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + S + G +R V LG+P S + + +R +Y +
Sbjct: 36 ITVVQGNFVSQEKASQLQTGMTREQVRALLGTPLLSDMFHADRWDYLFYFKRG------- 88
Query: 96 FLSPKIMEYIVLKITFGEKGVVS 118
S +++ L +TF + S
Sbjct: 89 --STAVVQQRDLVLTFSGDRLAS 109
>gi|292491007|ref|YP_003526446.1| SmpA/OmlA domain protein [Nitrosococcus halophilus Nc4]
gi|291579602|gb|ADE14059.1| SmpA/OmlA domain protein [Nitrosococcus halophilus Nc4]
Length = 189
Score = 35.1 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 21/149 (14%), Positives = 42/149 (28%), Gaps = 17/149 (11%)
Query: 15 LSFNKALFIIVIGLVVDYHVSYGSIS-GASLDMSAISLVSQGSSRSHVIESLGSPSFSIL 73
+ ++ ++ + V + G + + + G S+ V LG+P
Sbjct: 8 IIGCASVALVACSIERVPGVYRIDVQQGNVITQEMLGNLKPGMSKQQVRFVLGNPLLVDT 67
Query: 74 HNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEK------GVVSSVSMERLPN 127
+ Y E + + F G V + S + L
Sbjct: 68 FRPDHWHYIYSFKPGNGRR----------EQRTITVWFENDELSYVSGDVKANSQQELQR 117
Query: 128 RRFNPNPHTIPAPIQTADGFLRRLLNPNG 156
+ + Q +G L L+N G
Sbjct: 118 EEGDRATPILVPSRQGEEGLLSGLMNALG 146
>gi|56173138|gb|AAV80833.1| outer membrane lipoprotein A [Xanthomonas campestris pv.
phaseoli]
Length = 131
Score = 35.1 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 5/78 (6%)
Query: 12 FGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFS 71
L A+ + G + Y G + +A+ + G S+ V LG+PS
Sbjct: 1 MRNLLLVAAIALSTAGCGIIY--KQPIYQGNLIKQNAVEQLQVGQSKQQVSALLGTPSIP 58
Query: 72 ILHNGNRSQSFYYVSQKK 89
+ +Q + Y S ++
Sbjct: 59 ---DPFHAQRWDYTSTQR 73
>gi|326569721|gb|EGE19771.1| SmpA/OmlA family protein [Moraxella catarrhalis BC8]
Length = 122
Score = 35.1 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 35/93 (37%), Gaps = 6/93 (6%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFY-YVSQKKKWFPVKFLS 98
G L + + + G + + V+ LGSP+ NR Y Y +
Sbjct: 32 QGTPLSAAQANQIQVGMNANQVLYLLGSPALRDTLAPNRWDYIYDYTAGTDGKRQ---KK 88
Query: 99 PKIME-YIVLKITFGEKGVVSSV-SMERLPNRR 129
I L I F +G+V+ + + LP+ R
Sbjct: 89 SDIKNASQYLSIHFNNQGIVTRIDGRDSLPDTR 121
>gi|294625458|ref|ZP_06704088.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292600225|gb|EFF44332.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
Length = 131
Score = 35.1 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 36/108 (33%), Gaps = 12/108 (11%)
Query: 12 FGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFS 71
L A+ + G + Y G + +A+ + G S+ V LG+PS
Sbjct: 1 MRNLLLVAAVALSTAGCGIIY--KQPIYQGNLIKQNAVEQLQVGQSKQQVSALLGTPSIP 58
Query: 72 ILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSS 119
+ R Y +Q+ +I + V F E V+
Sbjct: 59 DPFHAQRWD--YTSTQRVDRLA----RTEIKNFTV----FFENEQVAR 96
>gi|134294730|ref|YP_001118465.1| SmpA/OmlA domain-containing protein [Burkholderia vietnamiensis G4]
gi|134137887|gb|ABO53630.1| SmpA/OmlA domain protein [Burkholderia vietnamiensis G4]
Length = 264
Score = 35.1 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 9/83 (10%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + + + G +R V LG+P S + + +R +Y +
Sbjct: 36 ITVVQGNFVSQEKAAQLQAGMTREQVRALLGTPLLSDMFHADRWDYLFYFKRG------- 88
Query: 96 FLSPKIMEYIVLKITFGEKGVVS 118
S +++ L +TF + S
Sbjct: 89 --STSVVQQRDLVLTFAGDRLAS 109
>gi|293609006|ref|ZP_06691309.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829579|gb|EFF87941.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325121221|gb|ADY80744.1| outer membrane lipoprotein [Acinetobacter calcoaceticus PHEA-2]
Length = 132
Score = 35.1 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 27/82 (32%), Gaps = 5/82 (6%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFY-YVSQKKKWFPVKFLS 98
G L + S V G + V LGSP+ + N R Y Y+
Sbjct: 29 QGTPLTKAQASQVQVGMNFQQVRFLLGSPTVTDPLNPLRWDYIYNYIPGTYAKKA----K 84
Query: 99 PKIMEYIVLKITFGEKGVVSSV 120
LKI F G V+ +
Sbjct: 85 IPAAHGQHLKIYFDGTGTVTKI 106
>gi|68249433|ref|YP_248545.1| small protein A [Haemophilus influenzae 86-028NP]
gi|68057632|gb|AAX87885.1| small protein A [Haemophilus influenzae 86-028NP]
Length = 137
Score = 35.1 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 14/102 (13%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
AL + V G L+ + ++ V +G + V LG+P IL + +
Sbjct: 13 ALSLASCSTVEKVVYRIDVPQGNYLEATTVAQVKEGMTSQQVQYLLGTP---ILIDPYNN 69
Query: 80 QSFYYV--SQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSS 119
++YYV Q+ PV + F ++G+V+
Sbjct: 70 YTWYYVFLQQRAYETPV---------QHTFTVKFDQRGIVTE 102
>gi|157148129|ref|YP_001455448.1| hypothetical protein CKO_03939 [Citrobacter koseri ATCC BAA-895]
gi|157085334|gb|ABV15012.1| hypothetical protein CKO_03939 [Citrobacter koseri ATCC BAA-895]
Length = 114
Score = 35.1 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 10/83 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + ++ V G ++ V +LG+P S + FY Q+ V
Sbjct: 34 QGNYLTANDVAKVRVGMTQQQVAYALGTPMMSDPF--GTNTWFYVFRQQPGHEGVT---- 87
Query: 100 KIMEYIVLKITFGEKGVVSSVSM 122
L +TF GV++++
Sbjct: 88 ----QQTLTLTFNSNGVLTNIDN 106
>gi|16272779|ref|NP_438998.1| small protein A [Haemophilus influenzae Rd KW20]
gi|1573852|gb|AAC22496.1| small protein A, putative [Haemophilus influenzae Rd KW20]
Length = 189
Score = 35.1 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 41/102 (40%), Gaps = 14/102 (13%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
AL + V G L+ + ++ V +G + V LG+P +L + S
Sbjct: 65 ALSLASCSTVEKVVYRIDVPQGNYLEATTVAQVKEGMTAQQVQYLLGTP---VLVDPYNS 121
Query: 80 QSFYYV--SQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSS 119
Q++YYV Q+ PV + F ++G+V+
Sbjct: 122 QTWYYVFLQQRAYETPV---------QHTFTVKFDQRGIVTE 154
>gi|91763235|ref|ZP_01265199.1| hypothetical protein PU1002_01215 [Candidatus Pelagibacter ubique
HTCC1002]
gi|91717648|gb|EAS84299.1| hypothetical protein PU1002_01215 [Candidatus Pelagibacter ubique
HTCC1002]
Length = 154
Score = 34.7 bits (78), Expect = 3.8, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 41/106 (38%), Gaps = 7/106 (6%)
Query: 17 FNKALFIIVIGLVVDYHV---SYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSIL 73
K I+I L + L+ L S+++ +++ LGSPS
Sbjct: 1 MRKLFVFIIISLFISACTLKKVEKHHGVHFLNKKQEKLTVNQSNKNDILKLLGSPSTKST 60
Query: 74 HNGNRSQSFYYVSQKKKWFPV-KFLSPKIMEYIVLKITFGEKGVVS 118
+ + + Y+ +K + KF S +I+ VL + G++
Sbjct: 61 FD---NDLWIYIERKTDNSSLTKFGSERIIVNNVLLLEINSMGLLE 103
>gi|153949351|ref|YP_001401853.1| hypothetical protein YpsIP31758_2890 [Yersinia pseudotuberculosis
IP 31758]
gi|152960846|gb|ABS48307.1| lipoprotein, SmpA/OmlA family [Yersinia pseudotuberculosis IP
31758]
Length = 113
Score = 34.7 bits (78), Expect = 3.8, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 37/84 (44%), Gaps = 10/84 (11%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L S + +G ++ V +LG+P + +Q+++YV +++
Sbjct: 34 QGNYLSPIDASKIHKGMTQQQVAYTLGTPMLQ---DPFGTQTWFYVFRQQPGH------- 83
Query: 100 KIMEYIVLKITFGEKGVVSSVSME 123
+ + L +TF GV++ + E
Sbjct: 84 EKITQQTLTLTFDSNGVLTDIKNE 107
>gi|259907661|ref|YP_002648017.1| hypothetical protein EpC_09890 [Erwinia pyrifoliae Ep1/96]
gi|224963283|emb|CAX54768.1| Small protein A [Erwinia pyrifoliae Ep1/96]
gi|283477508|emb|CAY73424.1| Small protein A precursor [Erwinia pyrifoliae DSM 12163]
Length = 115
Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 39/113 (34%), Gaps = 18/113 (15%)
Query: 18 NKALFIIVIGLVVDYHVSY--------GSISGASLDMSAISLVSQGSSRSHVIESLGSPS 69
V+ L++ S G L + ++ + G ++ V +LG+P
Sbjct: 4 KTLTAAAVVLLMMTAGCSTLERVVYRPDINQGNYLVANDVAKIHAGMTQQQVAYTLGTP- 62
Query: 70 FSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSM 122
+ +Q FY Q+ VK L +TF G ++++
Sbjct: 63 -MMHDPFGSNQWFYVFRQQPGHEQVK--------QQTLTLTFDRSGTLTNIDN 106
>gi|114331913|ref|YP_748135.1| SmpA/OmlA domain-containing protein [Nitrosomonas eutropha C91]
gi|114308927|gb|ABI60170.1| SmpA/OmlA domain protein [Nitrosomonas eutropha C91]
Length = 160
Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 40/105 (38%), Gaps = 11/105 (10%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G + ++ + G +RS V LG+P + + +R Y ++ +
Sbjct: 34 QGNVITEEMVARLKPGMTRSQVRFILGTPLVVDVFHSDRWDYIYRLAPGGR--------- 84
Query: 100 KIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIPAPIQTA 144
I E L + F + +S + + F+ + P P +T+
Sbjct: 85 -ITEERKLIVFF-KNDRLSHIQGDFPQPPAFSESSPVFPVPEKTS 127
>gi|261378103|ref|ZP_05982676.1| lipoprotein, SmpA/OmlA family [Neisseria cinerea ATCC 14685]
gi|296313310|ref|ZP_06863251.1| lipoprotein, SmpA/OmlA family [Neisseria polysaccharea ATCC 43768]
gi|269145555|gb|EEZ71973.1| lipoprotein, SmpA/OmlA family [Neisseria cinerea ATCC 14685]
gi|296840189|gb|EFH24127.1| lipoprotein, SmpA/OmlA family [Neisseria polysaccharea ATCC 43768]
Length = 125
Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 46/127 (36%), Gaps = 16/127 (12%)
Query: 1 MKKILFLNNFFFGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSH 60
M K L L L A + + L Y + I G L+ A++ + G ++
Sbjct: 1 MNKTLIL---VLSALFSLTACSVERVSLFPSYKLKI--IQGNELEPRAVASLRAGMTKDQ 55
Query: 61 VIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV 120
V+ LGSP + +R + S+ I E L + F E GV+
Sbjct: 56 VLLLLGSPMLHNAFHTDRWDYTFNTSRNGI----------IKERSNLTVYF-ENGVLVRA 104
Query: 121 SMERLPN 127
+ L N
Sbjct: 105 EGDALQN 111
>gi|319775229|ref|YP_004137717.1| small protein A [Haemophilus influenzae F3047]
gi|319897667|ref|YP_004135864.1| small protein a [Haemophilus influenzae F3031]
gi|317433173|emb|CBY81547.1| small protein A [Haemophilus influenzae F3031]
gi|317449820|emb|CBY86028.1| small protein A [Haemophilus influenzae F3047]
Length = 137
Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 14/102 (13%)
Query: 20 ALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRS 79
AL + V G L+ + ++ V +G + V LG+P IL + +
Sbjct: 13 ALSLASCSTVEKVVYRIDVPQGNYLEATTVAQVKEGMTAQQVQYLLGTP---ILIDPYNN 69
Query: 80 QSFYYV--SQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSS 119
++YYV Q+ PV + F ++G+V+
Sbjct: 70 YTWYYVFLQQRAYETPV---------QHTFTVKFDQRGIVTE 102
>gi|94310596|ref|YP_583806.1| SmpA/OmlA [Cupriavidus metallidurans CH34]
gi|93354448|gb|ABF08537.1| Putative small protein A (tmRNA-binding)-related protein (SmpA/OmlA
fragment) [Cupriavidus metallidurans CH34]
Length = 185
Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 30/83 (36%), Gaps = 9/83 (10%)
Query: 35 SYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPV 94
G + A++ + G +R V LG+P + + + +R Y + ++
Sbjct: 65 QITIEQGNFVSREAVAQLRPGMTRDQVSFLLGTPLLTDVFHADRWD--YVFTFRRGRR-- 120
Query: 95 KFLSPKIMEYIVLKITFGEKGVV 117
I++ L F ++
Sbjct: 121 -----DIVQQRRLTAYFAGDRLL 138
>gi|237749494|ref|ZP_04579974.1| SmpA/OmlA family protein [Oxalobacter formigenes OXCC13]
gi|229380856|gb|EEO30947.1| SmpA/OmlA family protein [Oxalobacter formigenes OXCC13]
Length = 416
Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 32/90 (35%), Gaps = 15/90 (16%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G + +S + G ++ V LG+P + + + NR + + P
Sbjct: 111 QGNFVSSEMLSKLKPGMTKEQVRFVLGTPLLTDMFHANRWD-----------YLFRLQKP 159
Query: 100 K--IMEYIVLKITFGEKGVVSSVSMERLPN 127
+ V F + +V + + LP+
Sbjct: 160 NGALTTNRV--TVFFKDNLVDRIVHDNLPD 187
>gi|15676131|ref|NP_273262.1| putative lipoprotein [Neisseria meningitidis MC58]
gi|7225425|gb|AAF40661.1| putative lipoprotein [Neisseria meningitidis MC58]
gi|261391739|emb|CAX49188.1| putative SmpA-like lipoprotein (OmlA) [Neisseria meningitidis 8013]
gi|316985123|gb|EFV64075.1| smpA / OmlA family protein [Neisseria meningitidis H44/76]
gi|325131031|gb|EGC53757.1| lipoprotein, SmpA/OmlA family [Neisseria meningitidis OX99.30304]
gi|325135127|gb|EGC57754.1| lipoprotein, SmpA/OmlA family [Neisseria meningitidis M13399]
gi|325137034|gb|EGC59630.1| lipoprotein, SmpA/OmlA family [Neisseria meningitidis M0579]
gi|325199413|gb|ADY94868.1| lipoprotein, SmpA/OmlA family [Neisseria meningitidis H44/76]
gi|325205293|gb|ADZ00746.1| lipoprotein, SmpA/OmlA family [Neisseria meningitidis M04-240196]
Length = 125
Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 16/97 (16%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLS 98
I G L+ A++ + G ++ V+ LGSP + +R + S+
Sbjct: 34 IQGNELEPRAVAALRPGMTKDQVLLLLGSPILRDAFHTDRWDYTFNTSRNGI-------- 85
Query: 99 PKIMEYIVLKITFGE------KGVVSSVSMERLPNRR 129
I E L + F +G V + E L +R+
Sbjct: 86 --IKERSNLTVYFENGVLVRTEGDVLQNAAEALKDRQ 120
>gi|329121144|ref|ZP_08249775.1| hypothetical protein HMPREF9083_0236 [Dialister micraerophilus DSM
19965]
gi|327471306|gb|EGF16760.1| hypothetical protein HMPREF9083_0236 [Dialister micraerophilus DSM
19965]
Length = 397
Score = 34.7 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 21/90 (23%)
Query: 35 SYGSISGASLDMSA--ISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWF 92
G S +A +S G+SR VI S G PS +L +G + S+Y+V QK
Sbjct: 174 GTGISSFYIFGKNAETYRNISVGTSRESVIRSYGKPS-QLLWDGKEN-SYYFVYQKGNK- 230
Query: 93 PVKFLSPKIMEYIVLKITFG-EKGVVSSVS 121
KI F + V S++
Sbjct: 231 ---------------KIYFNIKDDKVKSIT 245
>gi|323492388|ref|ZP_08097538.1| small protein A [Vibrio brasiliensis LMG 20546]
gi|323313349|gb|EGA66463.1| small protein A [Vibrio brasiliensis LMG 20546]
Length = 119
Score = 34.7 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 36/115 (31%), Gaps = 13/115 (11%)
Query: 10 FFFGKLSFNKALFIIVI---GLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLG 66
F K L + ++ L+ G ++ SA+ + G ++ V +G
Sbjct: 1 MQFKKWLIAVPLAMTMLTGCSLLEKLVYRIDINQGNYVEQSAVEQLKFGMTKEQVRYVMG 60
Query: 67 SPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVS 121
SP ++YY+ + I+ F G + V+
Sbjct: 61 SPMLV---ENGYPDTWYYIYHHTEGHNDSVQKNLIVN-------FNGNGQLVDVT 105
>gi|241664158|ref|YP_002982518.1| SmpA/OmlA domain-containing protein [Ralstonia pickettii 12D]
gi|240866185|gb|ACS63846.1| SmpA/OmlA domain protein [Ralstonia pickettii 12D]
Length = 218
Score = 34.7 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 35/88 (39%), Gaps = 9/88 (10%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLS 98
+ G + + + +G +R V LG+P + + + NR Y+ F K +
Sbjct: 58 VQGNFVSREQAAQLKEGMTRDQVRFVLGTPLLTDMFHANRWD---YI------FSFKRGN 108
Query: 99 PKIMEYIVLKITFGEKGVVSSVSMERLP 126
+++ L + F + V + LP
Sbjct: 109 TSVVQERRLTVWFDGDRLAKWVGADELP 136
>gi|309781279|ref|ZP_07676015.1| lipoprotein, SmpA/OmlA family [Ralstonia sp. 5_7_47FAA]
gi|308919692|gb|EFP65353.1| lipoprotein, SmpA/OmlA family [Ralstonia sp. 5_7_47FAA]
Length = 218
Score = 34.7 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 35/88 (39%), Gaps = 9/88 (10%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLS 98
+ G + + + +G +R V LG+P + + + NR Y+ F K +
Sbjct: 58 VQGNFVSREQAAQLKEGMTRDQVRFVLGTPLLTDMFHANRWD---YI------FSFKRGN 108
Query: 99 PKIMEYIVLKITFGEKGVVSSVSMERLP 126
+++ L + F + V + LP
Sbjct: 109 TSVVQERRLTVWFDGDRLAKWVGADELP 136
>gi|312795135|ref|YP_004028057.1| outer membrane lipoprotein OmlA [Burkholderia rhizoxinica HKI 454]
gi|312166910|emb|CBW73913.1| Outer membrane lipoprotein OmlA [Burkholderia rhizoxinica HKI 454]
Length = 284
Score = 34.7 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 31/83 (37%), Gaps = 9/83 (10%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + A S + G SR V LG+P + L + +R +Y +
Sbjct: 56 ITVVQGNFVSAEAASKLRVGMSRDEVRSVLGTPLLTDLFHTDRWDYVFYFKRG------- 108
Query: 96 FLSPKIMEYIVLKITFGEKGVVS 118
S +++ L + F V S
Sbjct: 109 --STSVVQQRDLVVNFVGDRVAS 129
>gi|269140083|ref|YP_003296784.1| SmpA/OmlA domain protein [Edwardsiella tarda EIB202]
gi|267985744|gb|ACY85573.1| SmpA/OmlA domain protein [Edwardsiella tarda EIB202]
gi|304559910|gb|ADM42574.1| Outer membrane lipoprotein SmpA [Edwardsiella tarda FL6-60]
Length = 116
Score = 34.7 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + ++ + +G ++ V +LG+P + S ++YYV +++ S
Sbjct: 34 QGNYLTAADVAKIHRGMTQQQVAYTLGTPLLQ---DPFGSSTWYYVFRQEP-------SH 83
Query: 100 KIMEYIVLKITFGEKGVVSSVSM 122
+ + L +TF GV+++V
Sbjct: 84 EGITQQTLTLTFNASGVLTNVEN 106
>gi|218187320|gb|EEC69747.1| hypothetical protein OsI_39279 [Oryza sativa Indica Group]
Length = 931
Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 31/92 (33%), Gaps = 4/92 (4%)
Query: 34 VSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFP 93
+++ ++D + I + +G ++ VI S + + + ++ K+
Sbjct: 310 TGTLTLNKLTVDKNLIDVFERGITQDQVILMAARASRTENQDAIDTAIVGMLADPKEARA 369
Query: 94 ----VKFLSPKIMEYIVLKITFGEKGVVSSVS 121
V FL + G + VS
Sbjct: 370 GIQEVHFLPFNPTDKRTALTYIDGDGKMYRVS 401
>gi|161502219|ref|YP_001569331.1| hypothetical protein SARI_00243 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160863566|gb|ABX20189.1| hypothetical protein SARI_00243 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 112
Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 10/83 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + ++ V G ++ V +LG+P + + FY Q+ V
Sbjct: 34 QGNYLTPTDVAKVRVGMTQQQVAYALGTPMMTDPF--GTNTWFYVFRQQPGHENVT---- 87
Query: 100 KIMEYIVLKITFGEKGVVSSVSM 122
L +TF GV++ +
Sbjct: 88 ----QQTLTLTFNSSGVLTHIDN 106
>gi|125580211|gb|EAZ21357.1| hypothetical protein OsJ_37014 [Oryza sativa Japonica Group]
Length = 931
Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 31/92 (33%), Gaps = 4/92 (4%)
Query: 34 VSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFP 93
+++ ++D + I + +G ++ VI S + + + ++ K+
Sbjct: 310 TGTLTLNKLTVDKNLIDVFERGITQDQVILMAARASRTENQDAIDTAIVGMLADPKEARA 369
Query: 94 ----VKFLSPKIMEYIVLKITFGEKGVVSSVS 121
V FL + G + VS
Sbjct: 370 GIQEVHFLPFNPTDKRTALTYIDGDGKMYRVS 401
>gi|4416349|gb|AAD20330.1| plasma membrane proton-ATPase gene OSA3 [Oryza sativa Japonica
Group]
Length = 265
Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 31/92 (33%), Gaps = 4/92 (4%)
Query: 34 VSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFP 93
+++ ++D + I + +G ++ VI S + + + ++ K+
Sbjct: 5 TGTLTLNKLTVDKNLIDVFERGITQDQVILMAARASRTENQDAIDTAIVGMLADPKEARA 64
Query: 94 ----VKFLSPKIMEYIVLKITFGEKGVVSSVS 121
V FL + G + VS
Sbjct: 65 GIQEVHFLPFNPTDKRTALTYIDGDGKMYRVS 96
>gi|115489790|ref|NP_001067382.1| Os12g0638700 [Oryza sativa Japonica Group]
gi|20302435|emb|CAD29296.1| plasma membrane H+ ATPase [Oryza sativa Japonica Group]
gi|77556811|gb|ABA99607.1| Plasma membrane ATPase 1, putative, expressed [Oryza sativa
Japonica Group]
gi|113649889|dbj|BAF30401.1| Os12g0638700 [Oryza sativa Japonica Group]
Length = 956
Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 31/92 (33%), Gaps = 4/92 (4%)
Query: 34 VSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFP 93
+++ ++D + I + +G ++ VI S + + + ++ K+
Sbjct: 335 TGTLTLNKLTVDKNLIDVFERGITQDQVILMAARASRTENQDAIDTAIVGMLADPKEARA 394
Query: 94 ----VKFLSPKIMEYIVLKITFGEKGVVSSVS 121
V FL + G + VS
Sbjct: 395 GIQEVHFLPFNPTDKRTALTYIDGDGKMYRVS 426
>gi|317047778|ref|YP_004115426.1| hypothetical protein Pat9b_1553 [Pantoea sp. At-9b]
gi|316949395|gb|ADU68870.1| conserved hypothetical protein [Pantoea sp. At-9b]
Length = 115
Score = 34.7 bits (78), Expect = 4.8, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 46/113 (40%), Gaps = 5/113 (4%)
Query: 10 FFFGKLSFNKALFIIVIGLVVDYHVSYGS-ISGASLDMSAISLVSQGSSRSHVIESLGSP 68
+ + G + + ++ S ++ S + +V+ S++ V+ LG+P
Sbjct: 1 MKITHFLLLAFTAMALSGCMANVDRTHSSDLNNYSEKVIRERIVTGKSTKKDVLLLLGTP 60
Query: 69 SFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEY-IVLKITFGEKGVVSSV 120
+ + ++ Y S+ + F P I + +L + F + GVVS +
Sbjct: 61 ATPKAF--KSASTWIYASKIVDRR-LYFFIPIIRDRDQLLLLEFNDAGVVSKM 110
>gi|330895323|gb|EGH27661.1| outer membrane lipoprotein OmlA [Pseudomonas syringae pv.
japonica str. M301072PT]
Length = 173
Score = 34.7 bits (78), Expect = 4.8, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 24/67 (35%), Gaps = 6/67 (8%)
Query: 23 IIVIGLVVDYHVSYGSI------SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNG 76
+GL+ S+ + G + I + G +R V +G+P + +
Sbjct: 11 FTFVGLLALAGCSFPGVYKIDIQQGNVVTQDMIDQLRPGMTRRQVRFIMGNPLLTDTFHS 70
Query: 77 NRSQSFY 83
+R Y
Sbjct: 71 DRGDYLY 77
>gi|308388423|gb|ADO30743.1| putative outer membrane lipoprotein [Neisseria meningitidis
alpha710]
Length = 139
Score = 34.3 bits (77), Expect = 5.0, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 16/97 (16%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLS 98
I G L+ A++ + G ++ V+ LGSP + +R + S+
Sbjct: 48 IQGNELEPRAVAALRPGMTKDQVLLLLGSPILRDAFHTDRWDYTFNTSRNGI-------- 99
Query: 99 PKIMEYIVLKITFGE------KGVVSSVSMERLPNRR 129
I E L + F +G V + E L +R+
Sbjct: 100 --IKERSNLTVYFENGVLVRTEGDVLQNAAEALKDRQ 134
>gi|152971466|ref|YP_001336575.1| hypothetical protein KPN_02939 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238896062|ref|YP_002920798.1| hypothetical protein KP1_4195 [Klebsiella pneumoniae NTUH-K2044]
gi|262043863|ref|ZP_06016952.1| small protein A [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
13884]
gi|330013059|ref|ZP_08307563.1| small protein A [Klebsiella sp. MS 92-3]
gi|150956315|gb|ABR78345.1| small membrane protein A [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|238548380|dbj|BAH64731.1| small membrane protein A [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|259038797|gb|EEW39979.1| small protein A [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
13884]
gi|328533607|gb|EGF60322.1| small protein A [Klebsiella sp. MS 92-3]
Length = 113
Score = 34.3 bits (77), Expect = 5.0, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 32/83 (38%), Gaps = 10/83 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + ++ + G ++ V +LG+P + + FY Q+ V
Sbjct: 34 QGNYLAPNDVAKIRVGMTQQQVAYALGTPMMTDPF--GTNTWFYVFRQEPGHQKVT---- 87
Query: 100 KIMEYIVLKITFGEKGVVSSVSM 122
L +TF GV++++
Sbjct: 88 ----QQTLTLTFNSGGVLTNIDN 106
>gi|59712606|ref|YP_205382.1| small protein A [Vibrio fischeri ES114]
gi|59480707|gb|AAW86494.1| small protein A [Vibrio fischeri ES114]
Length = 118
Score = 34.3 bits (77), Expect = 5.1, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 38/126 (30%), Gaps = 14/126 (11%)
Query: 10 FFFGKLSFNKALFIIVIGLVVDYHV---SYGSISGASLDMSAISLVSQGSSRSHVIESLG 66
F K L + ++G G ++ A+ + G ++ V +G
Sbjct: 1 MQFKKWIIALPLAVGLLGGCSLLEPLVYRIDIAQGNYVEQEAVDKLRFGMTKQQVQFVMG 60
Query: 67 SPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV-SMERL 125
SP ++YY+ L + F + G ++++ +
Sbjct: 61 SPMLV---ESGYPNTWYYIYHFTHGHEKSI-------QKNLIVHFDDNGNLTNMEGDFPM 110
Query: 126 PNRRFN 131
+ F
Sbjct: 111 SDSFFE 116
>gi|152976054|ref|YP_001375571.1| hypothetical protein Bcer98_2330 [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152024806|gb|ABS22576.1| conserved hypothetical protein [Bacillus cytotoxicus NVH 391-98]
Length = 191
Score = 34.3 bits (77), Expect = 5.1, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 25/76 (32%), Gaps = 9/76 (11%)
Query: 42 ASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKI 101
+D G+S+ VI LG+P+ Q YY+ + + P
Sbjct: 117 YMIDDLLAKHKLVGTSKEEVITLLGTPTEIRQFE-TVHQMIYYLGTEGGFIP-------- 167
Query: 102 MEYIVLKITFGEKGVV 117
++ L + +
Sbjct: 168 IDSECLILYLNHNDRI 183
>gi|238750403|ref|ZP_04611904.1| hypothetical protein yrohd0001_21140 [Yersinia rohdei ATCC 43380]
gi|238711334|gb|EEQ03551.1| hypothetical protein yrohd0001_21140 [Yersinia rohdei ATCC 43380]
Length = 113
Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 38/84 (45%), Gaps = 10/84 (11%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + S + +G ++ V +LG+P + +++++YV +++
Sbjct: 34 QGNYLSPNDASKIHKGMTQQQVAYTLGTPMLQ---DPFGTKTWFYVFRQQPGH------- 83
Query: 100 KIMEYIVLKITFGEKGVVSSVSME 123
+ + L +TF GV++ + +
Sbjct: 84 EKVTQQTLTLTFDSSGVLTDIKNQ 107
>gi|325983371|ref|YP_004295773.1| SmpA/OmlA domain-containing protein [Nitrosomonas sp. AL212]
gi|325532890|gb|ADZ27611.1| SmpA/OmlA domain-containing protein [Nitrosomonas sp. AL212]
Length = 133
Score = 34.3 bits (77), Expect = 5.3, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 31/84 (36%), Gaps = 11/84 (13%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G + + ++ G ++S V+ +GSP NR Y + +
Sbjct: 31 QGNVVSDEMLEKLTLGMTKSQVLFVMGSPLIVDAFRENRWDYVYLMRE----------KG 80
Query: 100 KIMEYIVLKITFGEKGVVSSVSME 123
++E+ L + F +++ +
Sbjct: 81 DLIEHKRLTLFFENDTLIN-IENY 103
>gi|242084386|ref|XP_002442618.1| hypothetical protein SORBIDRAFT_08g023070 [Sorghum bicolor]
gi|241943311|gb|EES16456.1| hypothetical protein SORBIDRAFT_08g023070 [Sorghum bicolor]
Length = 956
Score = 34.3 bits (77), Expect = 5.4, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 31/92 (33%), Gaps = 4/92 (4%)
Query: 34 VSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFP 93
+++ ++D + + + +G ++ VI S + + + ++ K+
Sbjct: 335 TGTLTLNKLTVDKNLVDVFERGITQDQVILMAARASRTENQDAIDTAIVGMLADPKEARA 394
Query: 94 ----VKFLSPKIMEYIVLKITFGEKGVVSSVS 121
V FL + G + VS
Sbjct: 395 GIQEVHFLPFNPTDKRTALTYIDGDGKMYRVS 426
>gi|146312738|ref|YP_001177812.1| hypothetical protein Ent638_3097 [Enterobacter sp. 638]
gi|145319614|gb|ABP61761.1| SmpA/OmlA domain protein [Enterobacter sp. 638]
Length = 113
Score = 34.3 bits (77), Expect = 5.4, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 38/113 (33%), Gaps = 18/113 (15%)
Query: 18 NKALFIIVIGLVVDYHVSY--------GSISGASLDMSAISLVSQGSSRSHVIESLGSPS 69
+ + L++ S G L + +S V G ++ V +LG+P
Sbjct: 4 KTLTAVAAVLLMLTAGCSTLERVVYRPDINQGNYLTPNDVSKVRVGMTQQQVAYALGTPM 63
Query: 70 FSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSM 122
S + FY Q+ V L +TF GV++++
Sbjct: 64 MSDPF--GTNTWFYVFRQQPGHEGVT--------QQTLTLTFNSSGVLTNIDN 106
>gi|56460098|ref|YP_155379.1| Outer membrane lipoprotein OmlA (small protein A) [Idiomarina
loihiensis L2TR]
gi|56179108|gb|AAV81830.1| Outer membrane lipoprotein OmlA (small protein A) [Idiomarina
loihiensis L2TR]
Length = 116
Score = 34.3 bits (77), Expect = 5.4, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 22/69 (31%)
Query: 15 LSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILH 74
+ + + L+ G L+ + + G + V+ LG+P
Sbjct: 6 VFLVAVITLNGCSLLDKMVYRIDIPQGNYLEQDDVDKLRVGMTEEQVVFVLGTPVAQNSF 65
Query: 75 NGNRSQSFY 83
+ +R Y
Sbjct: 66 DSDRWVYLY 74
>gi|114321057|ref|YP_742740.1| SmpA/OmlA domain-containing protein [Alkalilimnicola ehrlichii
MLHE-1]
gi|114227451|gb|ABI57250.1| SmpA/OmlA domain protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 117
Score = 34.3 bits (77), Expect = 5.5, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 27/69 (39%), Gaps = 5/69 (7%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYV-----SQKKKWFPV 94
G + + + G S+ V +G P+ +R Y + S +KK +
Sbjct: 36 QGNIMTQEMVDELRVGMSQQQVRTIMGPPAVVDPFRTDRWDYVYTMRPGGGSMEKKRMTL 95
Query: 95 KFLSPKIME 103
+F ++++
Sbjct: 96 RFEDGRLVD 104
>gi|156932841|ref|YP_001436757.1| hypothetical protein ESA_00638 [Cronobacter sakazakii ATCC BAA-894]
gi|156531095|gb|ABU75921.1| hypothetical protein ESA_00638 [Cronobacter sakazakii ATCC BAA-894]
Length = 114
Score = 34.3 bits (77), Expect = 5.6, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 10/90 (11%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + I+ V G ++ V +LG+P + N FY Q+ V
Sbjct: 34 QGNYLTSTDIAKVRIGMTQQQVAYALGTPMMTDPFGSNTW--FYVFRQQPGHEDVT---- 87
Query: 100 KIMEYIVLKITFGEKGVVSSVSMERLPNRR 129
L +TF GV++++ + + +
Sbjct: 88 ----QQTLTLTFNSNGVLTNMDNKPKLDAK 113
>gi|237798544|ref|ZP_04587005.1| outer membrane lipoprotein OmlA [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331021397|gb|EGI01454.1| outer membrane lipoprotein OmlA [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 173
Score = 34.3 bits (77), Expect = 6.0, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 24/67 (35%), Gaps = 6/67 (8%)
Query: 23 IIVIGLVVDYHVSYGSI------SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNG 76
+GL+ S+ + G + I + G +R V +G+P + +
Sbjct: 11 FTFVGLLALAGCSFPGVYKIDIQQGNVVTQDMIDQLRPGMTRRQVRFIMGNPLLTDTFHS 70
Query: 77 NRSQSFY 83
NR Y
Sbjct: 71 NRWDYLY 77
>gi|70734318|ref|YP_257958.1| outer membrane lipoprotein OmlA [Pseudomonas fluorescens Pf-5]
gi|68348617|gb|AAY96223.1| outer membrane lipoprotein OmlA [Pseudomonas fluorescens Pf-5]
Length = 175
Score = 34.3 bits (77), Expect = 6.0, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 24/67 (35%), Gaps = 6/67 (8%)
Query: 23 IIVIGLVVDYHVSYGSI------SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNG 76
+GL+ S+ + G + I + G +R V +G+P + +
Sbjct: 11 FTFVGLLALAGCSFPGVYKIDIQQGNVVTQDMIDQLRPGMTRRQVRFIMGNPLLTDTFHA 70
Query: 77 NRSQSFY 83
+R Y
Sbjct: 71 DRWDYLY 77
>gi|166235374|pdb|2PXG|A Chain A, Nmr Solution Structure Of Omla
Length = 118
Score = 34.3 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 30/84 (35%), Gaps = 9/84 (10%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G + +A+ + G S+ V LG+PS + +Q + Y S ++ +
Sbjct: 14 QGNLIKQNAVEQLQVGQSKQQVSALLGTPSIP---DPFHAQRWDYTSTQRVDRLAR---- 66
Query: 100 KIMEYIVLKITFGEKGVVSSVSME 123
E + F + VV
Sbjct: 67 --TEIKNFTVFFENEQVVRWEGDY 88
>gi|218767106|ref|YP_002341618.1| putative lipoprotein [Neisseria meningitidis Z2491]
gi|121051114|emb|CAM07385.1| putative lipoprotein [Neisseria meningitidis Z2491]
Length = 125
Score = 34.3 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 11/89 (12%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLS 98
I G L+ A++ + G ++ V+ LGSP + +R + S+
Sbjct: 34 IQGNELEPRAVASLRPGMTKDQVLLLLGSPILRDAFHTDRWDYTFNTSRNGI-------- 85
Query: 99 PKIMEYIVLKITFGEKGVVSSVSMERLPN 127
I + L + F E GV+ L N
Sbjct: 86 --IKDRSNLTVYF-ENGVLVRTEGNALQN 111
>gi|294782157|ref|ZP_06747483.1| inner membrane protein YpdA [Fusobacterium sp. 1_1_41FAA]
gi|294480798|gb|EFG28573.1| inner membrane protein YpdA [Fusobacterium sp. 1_1_41FAA]
Length = 558
Score = 34.3 bits (77), Expect = 6.4, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 41/119 (34%), Gaps = 4/119 (3%)
Query: 11 FFGKLSFNKALFIIVIGLVVDYHVSYGS----ISGASLDMSAISLVSQGSSRSHVIESLG 66
+F K + I+ + I+G S D + I+ + SS + + G
Sbjct: 218 YFRKTENLSEVCKIIANSLGARATVITDTKEIIAGFSSDKTVINRSNIRSSNTRKVLKTG 277
Query: 67 SPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERL 125
I + + F+Y+S K + L K LKI F ++ + +
Sbjct: 278 EVMLVIKDDDEIIEDFFYISPHIKSCIILPLKEKNDVSGTLKIFFDTAEKITEKNRYLM 336
>gi|221069915|ref|ZP_03546020.1| SmpA/OmlA domain protein [Comamonas testosteroni KF-1]
gi|220714938|gb|EED70306.1| SmpA/OmlA domain protein [Comamonas testosteroni KF-1]
Length = 181
Score = 33.9 bits (76), Expect = 6.6, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 29/77 (37%), Gaps = 12/77 (15%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLS 98
+ G + + + G SR + + LG+P + + +G+R + + ++
Sbjct: 46 VQGNFVSKEQVEALQPGMSRQQIRDILGTPLVTSVFHGDRWEYVFTIN-----------R 94
Query: 99 PKIMEY-IVLKITFGEK 114
P + L + F
Sbjct: 95 PGVESQIRKLTVFFNGD 111
>gi|118090617|ref|XP_423827.2| PREDICTED: similar to TBC1 (tre-2/USP6, BUB2, cdc16) domain family,
member 1 [Gallus gallus]
Length = 1124
Score = 33.9 bits (76), Expect = 6.6, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 29/72 (40%)
Query: 87 QKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIPAPIQTADG 146
+K+ ++ L K + +L + ++ S L NRR + I ++
Sbjct: 670 RKRTSRELRELWKKAIIQQILLLRMEKENQKLQASENNLQNRRLKLDYEEITPCLKEVTL 729
Query: 147 FLRRLLNPNGRS 158
++L+ GRS
Sbjct: 730 IWEKMLSTPGRS 741
>gi|238788241|ref|ZP_04632036.1| hypothetical protein yfred0001_36910 [Yersinia frederiksenii ATCC
33641]
gi|238793789|ref|ZP_04637410.1| hypothetical protein yinte0001_6910 [Yersinia intermedia ATCC
29909]
gi|238723828|gb|EEQ15473.1| hypothetical protein yfred0001_36910 [Yersinia frederiksenii ATCC
33641]
gi|238726853|gb|EEQ18386.1| hypothetical protein yinte0001_6910 [Yersinia intermedia ATCC
29909]
Length = 109
Score = 33.9 bits (76), Expect = 7.0, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 38/84 (45%), Gaps = 10/84 (11%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + S + +G ++ V +LG+P + +++++YV +++
Sbjct: 30 QGNYLSPNDASKIHKGMTQQQVAYTLGTPMLQ---DPFGTKTWFYVFRQQPGH------- 79
Query: 100 KIMEYIVLKITFGEKGVVSSVSME 123
+ + L +TF GV++ + E
Sbjct: 80 EKVTQQTLTLTFDSSGVLTDIKNE 103
>gi|326919306|ref|XP_003205922.1| PREDICTED: LOW QUALITY PROTEIN: TBC1 domain family member 1-like
[Meleagris gallopavo]
Length = 1201
Score = 33.9 bits (76), Expect = 7.0, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 29/72 (40%)
Query: 87 QKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIPAPIQTADG 146
+K+ ++ L K + +L + ++ S L NRR + I ++
Sbjct: 723 RKRTSRELRELWKKAIIQQILLLRMEKENQKLQASENNLQNRRLKLDYEEITPCLKEVTL 782
Query: 147 FLRRLLNPNGRS 158
++L+ GRS
Sbjct: 783 IWEKMLSTPGRS 794
>gi|325203323|gb|ADY98776.1| lipoprotein, SmpA/OmlA family [Neisseria meningitidis M01-240355]
Length = 125
Score = 33.9 bits (76), Expect = 7.0, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 33/89 (37%), Gaps = 11/89 (12%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLS 98
I G L+ A++ + G ++ V+ LGSP + + + S+
Sbjct: 34 IQGNELEPRAVASLRPGMTKDQVLLLLGSPILRDAFHTDHWDYTFNTSRNGI-------- 85
Query: 99 PKIMEYIVLKITFGEKGVVSSVSMERLPN 127
I + L + F E GV+ L N
Sbjct: 86 --IKDRSNLTVYF-ENGVLVRTEGNALQN 111
>gi|218193547|gb|EEC75974.1| hypothetical protein OsI_13084 [Oryza sativa Indica Group]
gi|222625595|gb|EEE59727.1| hypothetical protein OsJ_12166 [Oryza sativa Japonica Group]
Length = 966
Score = 33.9 bits (76), Expect = 7.0, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 31/92 (33%), Gaps = 4/92 (4%)
Query: 34 VSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFP 93
+++ ++D + I + +G ++ VI S + + + ++ K+
Sbjct: 345 TGTLTLNKLTVDKNLIEIFERGVTQDQVILMAARASRTENQDAIDTAIVGMLADPKEARA 404
Query: 94 ----VKFLSPKIMEYIVLKITFGEKGVVSSVS 121
V FL + G + VS
Sbjct: 405 GIQEVHFLPFNPTDKRTALTYIDSDGKMYRVS 436
>gi|187930053|ref|YP_001900540.1| SmpA/OmlA domain-containing protein [Ralstonia pickettii 12J]
gi|187726943|gb|ACD28108.1| SmpA/OmlA domain protein [Ralstonia pickettii 12J]
Length = 218
Score = 33.9 bits (76), Expect = 7.0, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 36/88 (40%), Gaps = 9/88 (10%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLS 98
+ G + + + +G +R V LG+P + + + NR Y+ F K +
Sbjct: 58 VQGNFVSREQAAQLKEGMTRDQVRFVLGTPLLTDMFHANRWD---YI------FSFKRGN 108
Query: 99 PKIMEYIVLKITFGEKGVVSSVSMERLP 126
+++ L + F + + V + LP
Sbjct: 109 TAVVQERKLTVWFDGERLAKWVGADELP 136
>gi|115454693|ref|NP_001050947.1| Os03g0689300 [Oryza sativa Japonica Group]
gi|20302431|emb|CAD29294.1| plasma membrane H+ ATPase [Oryza sativa Japonica Group]
gi|50838972|gb|AAT81733.1| H-ATPase [Oryza sativa Japonica Group]
gi|108710479|gb|ABF98274.1| Plasma membrane ATPase 3, putative, expressed [Oryza sativa
Japonica Group]
gi|113549418|dbj|BAF12861.1| Os03g0689300 [Oryza sativa Japonica Group]
Length = 956
Score = 33.9 bits (76), Expect = 7.0, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 31/92 (33%), Gaps = 4/92 (4%)
Query: 34 VSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFP 93
+++ ++D + I + +G ++ VI S + + + ++ K+
Sbjct: 335 TGTLTLNKLTVDKNLIEIFERGVTQDQVILMAARASRTENQDAIDTAIVGMLADPKEARA 394
Query: 94 ----VKFLSPKIMEYIVLKITFGEKGVVSSVS 121
V FL + G + VS
Sbjct: 395 GIQEVHFLPFNPTDKRTALTYIDSDGKMYRVS 426
>gi|161870856|ref|YP_001600030.1| lipoprotein [Neisseria meningitidis 053442]
gi|161596409|gb|ABX74069.1| lipoprotein [Neisseria meningitidis 053442]
Length = 139
Score = 33.9 bits (76), Expect = 7.2, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 11/89 (12%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLS 98
I G L+ A++ + G ++ V+ LGSP + +R + S+
Sbjct: 48 IQGNELEPRAVASLRPGMTKDQVLLLLGSPILRDAFHTDRWDYTFNTSRNGI-------- 99
Query: 99 PKIMEYIVLKITFGEKGVVSSVSMERLPN 127
I + L + F E GV+ L N
Sbjct: 100 --IKDRSNLTVYF-ENGVLVRTEGNALQN 125
>gi|239997065|ref|ZP_04717589.1| putative TonB-dependent receptor [Alteromonas macleodii ATCC 27126]
Length = 424
Score = 33.9 bits (76), Expect = 7.4, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 28/84 (33%)
Query: 61 VIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV 120
V ++LGSP + N S F Y V F I + IVL +G+ + +
Sbjct: 168 VAQALGSPGLDAEESNNYSAGFTYSPTADFNLTVDFYRIDIDDRIVLSNNLSGEGIEALL 227
Query: 121 SMERLPNRRFNPNPHTIPAPIQTA 144
+ RF N
Sbjct: 228 AGTGANQARFFLNAIDSRTEGVDI 251
>gi|238759663|ref|ZP_04620823.1| hypothetical protein yaldo0001_24680 [Yersinia aldovae ATCC 35236]
gi|238702091|gb|EEP94648.1| hypothetical protein yaldo0001_24680 [Yersinia aldovae ATCC 35236]
Length = 109
Score = 33.9 bits (76), Expect = 7.6, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 38/84 (45%), Gaps = 10/84 (11%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + S + +G ++ V +LG+P + +++++YV +++
Sbjct: 30 QGNYLSPNDASKIHKGMTQQQVAYTLGTPMLQ---DPFGTKTWFYVFRQQPGH------- 79
Query: 100 KIMEYIVLKITFGEKGVVSSVSME 123
+ + L +TF GV++ + E
Sbjct: 80 EKITQQTLTLTFDSSGVLTDIKNE 103
>gi|229592656|ref|YP_002874775.1| outer membrane lipoprotein [Pseudomonas fluorescens SBW25]
gi|229364522|emb|CAY52378.1| outer membrane lipoprotein [Pseudomonas fluorescens SBW25]
Length = 175
Score = 33.9 bits (76), Expect = 7.7, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 24/67 (35%), Gaps = 6/67 (8%)
Query: 23 IIVIGLVVDYHVSYGSI------SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNG 76
+GL+ S+ + G + I + G +R V +G+P + +
Sbjct: 11 FTFVGLLALAGCSFPGVYKIDIQQGNVVTQDMIDQLRPGMTRRQVRFIMGNPLLTDTFHA 70
Query: 77 NRSQSFY 83
+R Y
Sbjct: 71 DRWDYLY 77
>gi|312963102|ref|ZP_07777587.1| Outer membrane lipoprotein [Pseudomonas fluorescens WH6]
gi|311282613|gb|EFQ61209.1| Outer membrane lipoprotein [Pseudomonas fluorescens WH6]
Length = 175
Score = 33.9 bits (76), Expect = 7.8, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 24/67 (35%), Gaps = 6/67 (8%)
Query: 23 IIVIGLVVDYHVSYGSI------SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNG 76
+GL+ S+ + G + I + G +R V +G+P + +
Sbjct: 11 FTFVGLLALAGCSFPGVYKIDIQQGNVVTQDMIDQLRPGMTRRQVRFIMGNPLLTDTFHA 70
Query: 77 NRSQSFY 83
+R Y
Sbjct: 71 DRWDYLY 77
>gi|238784171|ref|ZP_04628184.1| hypothetical protein yberc0001_30080 [Yersinia bercovieri ATCC
43970]
gi|238714880|gb|EEQ06879.1| hypothetical protein yberc0001_30080 [Yersinia bercovieri ATCC
43970]
Length = 113
Score = 33.9 bits (76), Expect = 7.8, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + S + +G ++ V +LG+P + +++++YV +++
Sbjct: 34 QGNYLSPNDASKIHKGMTQQQVAYTLGTPMLQ---DPFGTKTWFYVFRQQPGH------- 83
Query: 100 KIMEYIVLKITFGEKGVVSSVSM 122
+ + L +TF GV++ +
Sbjct: 84 EKITQQTLTLTFDSSGVLTDIKN 106
>gi|317402173|gb|EFV82764.1| outer membrane lipoprotein [Achromobacter xylosoxidans C54]
Length = 178
Score = 33.9 bits (76), Expect = 7.8, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 37 GSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNR 78
G G + ++L+ G +R V +LGSP+ + + + NR
Sbjct: 38 GVQQGNWITQEQVALLQPGMTREQVRFALGSPTLTSVLHANR 79
>gi|311104366|ref|YP_003977219.1| outer membrane lipoprotein OmlA domain-containing protein
[Achromobacter xylosoxidans A8]
gi|310759055|gb|ADP14504.1| outer membrane lipoprotein OmlA domain protein [Achromobacter
xylosoxidans A8]
Length = 178
Score = 33.9 bits (76), Expect = 7.8, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 37 GSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNR 78
G G + ++L+ G +R V +LGSP+ + + + NR
Sbjct: 38 GVQQGNWITQEQVALLQPGMTREQVRFALGSPTLTSVLHANR 79
>gi|293603741|ref|ZP_06686160.1| outer membrane lipoprotein OmlA [Achromobacter piechaudii ATCC
43553]
gi|292817915|gb|EFF76977.1| outer membrane lipoprotein OmlA [Achromobacter piechaudii ATCC
43553]
Length = 178
Score = 33.9 bits (76), Expect = 7.8, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 37 GSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNR 78
G G + ++L+ G +R V +LGSP+ + + + NR
Sbjct: 38 GVQQGNWITQEQVALLQPGMTREQVRFALGSPTLTSVLHANR 79
>gi|295677681|ref|YP_003606205.1| SmpA/OmlA domain protein [Burkholderia sp. CCGE1002]
gi|295437524|gb|ADG16694.1| SmpA/OmlA domain protein [Burkholderia sp. CCGE1002]
Length = 278
Score = 33.9 bits (76), Expect = 7.9, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 32/91 (35%), Gaps = 9/91 (9%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + + G +R+ V + LG+P + + + +R +Y +
Sbjct: 36 ITVVQGNFVSQEMAGQMKVGMTRAQVRQVLGTPLLTDMFHADRWDYTFYFKRG------- 88
Query: 96 FLSPKIMEYIVLKITFGEKGVVSSVSMERLP 126
+ I++ + F V E LP
Sbjct: 89 --NTAIVQQRDFVVFFSGDTVTHWTGGEDLP 117
>gi|253997076|ref|YP_003049140.1| SmpA/OmlA domain-containing protein [Methylotenera mobilis JLW8]
gi|253983755|gb|ACT48613.1| SmpA/OmlA domain protein [Methylotenera mobilis JLW8]
Length = 329
Score = 33.9 bits (76), Expect = 7.9, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 19/118 (16%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G + + + G ++S V +G+P +GNR YV Q ++ +
Sbjct: 37 QGNVVTSKMLLQLRPGMTKSQVRFIMGTPLIQDSFHGNRWD---YVYQMRE-------AG 86
Query: 100 KIMEYIVLKITFGEKGVVSSVSMERLPNRRFNPNPHTIPAPIQTADGFLRRLLNPNGR 157
KI+E + + F + L R + P AP RL+ P +
Sbjct: 87 KIIEQRRVILDFEKD---------LLKAVRGDVIPAGSAAPETERANTGTRLVEPYKK 135
>gi|330958068|gb|EGH58328.1| outer membrane lipoprotein OmlA [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 173
Score = 33.9 bits (76), Expect = 8.0, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 24/67 (35%), Gaps = 6/67 (8%)
Query: 23 IIVIGLVVDYHVSYGSI------SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNG 76
+GL+ S+ + G + I + G +R V +G+P + +
Sbjct: 11 FTFVGLLALAGCSFPGVYKIDIQQGNVVTQDMIDQLRPGMTRRQVRFIMGNPLLTDTFHA 70
Query: 77 NRSQSFY 83
+R Y
Sbjct: 71 DRWDYLY 77
>gi|313680744|ref|YP_004058483.1| hypothetical protein Ocepr_1858 [Oceanithermus profundus DSM 14977]
gi|313153459|gb|ADR37310.1| hypothetical protein Ocepr_1858 [Oceanithermus profundus DSM 14977]
Length = 550
Score = 33.9 bits (76), Expect = 8.0, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 9/91 (9%)
Query: 16 SFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHN 75
F AL ++V+ ++ +ISG +DM A G V ++ S +
Sbjct: 5 LFIGALLMLVLAACGEFVTPNATISGYVVDMKA------GEPVEGVSVTIVQTGESATTD 58
Query: 76 GNRSQSFYYVSQKKKWFPVKFLSPKIMEYIV 106
Q +Y + K+ + + F V
Sbjct: 59 A---QGYYSIDTKRGRYTLVFTKAGFATSKV 86
>gi|229576796|ref|YP_001005330.2| hypothetical protein YE0997 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|332162710|ref|YP_004299287.1| hypothetical protein YE105_C3090 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325666940|gb|ADZ43584.1| hypothetical protein YE105_C3090 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330859468|emb|CBX69812.1| small protein A [Yersinia enterocolitica W22703]
Length = 113
Score = 33.9 bits (76), Expect = 8.0, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + S + +G ++ V +LG+P + +++++YV +++
Sbjct: 34 QGNYLSPNDASKIHKGMTQQQVAYTLGTPMLQ---DPFGTKTWFYVFRQQPGH------- 83
Query: 100 KIMEYIVLKITFGEKGVVSSVSM 122
+ + L +TF GV++ +
Sbjct: 84 EKVTQQTLTLTFDSSGVLTDIKN 106
>gi|330937927|gb|EGH41714.1| outer membrane lipoprotein OmlA [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 173
Score = 33.9 bits (76), Expect = 8.0, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 6/67 (8%)
Query: 23 IIVIGLVVDYHVSYGSIS------GASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNG 76
+GL+ S+ ++ G + I + G +R V +G+P + +
Sbjct: 11 FTFVGLLALAGCSFPGVNKIDIQQGNVVTQDMIDQLRPGMTRRQVRFIMGNPLLTDTFHS 70
Query: 77 NRSQSFY 83
+R Y
Sbjct: 71 DRWDYLY 77
>gi|238762779|ref|ZP_04623748.1| hypothetical protein ykris0001_9580 [Yersinia kristensenii ATCC
33638]
gi|238699084|gb|EEP91832.1| hypothetical protein ykris0001_9580 [Yersinia kristensenii ATCC
33638]
Length = 109
Score = 33.9 bits (76), Expect = 8.0, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 38/84 (45%), Gaps = 10/84 (11%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + S + +G ++ V +LG+P + +++++YV +++
Sbjct: 30 QGNYLSPNDASKIHKGMTQQQVAYTLGTPMLQ---DPFGTKTWFYVFRQQPGH------- 79
Query: 100 KIMEYIVLKITFGEKGVVSSVSME 123
+ + L +TF GV++ + E
Sbjct: 80 EKVTQQTLTLTFDSSGVLTDIKNE 103
>gi|330807464|ref|YP_004351926.1| outer membrane lipoprotein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327375572|gb|AEA66922.1| Putative outer membrane lipoprotein [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 175
Score = 33.9 bits (76), Expect = 8.1, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 24/67 (35%), Gaps = 6/67 (8%)
Query: 23 IIVIGLVVDYHVSYGSI------SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNG 76
+GL+ S+ + G + I + G +R V +G+P + +
Sbjct: 11 FTFVGLLALAGCSFPGVYKIDIQQGNVVTQDMIDQLRPGMTRRQVRFIMGNPLLTDTFHA 70
Query: 77 NRSQSFY 83
+R Y
Sbjct: 71 DRWDYLY 77
>gi|307129651|ref|YP_003881667.1| outer membrane lipoprotein OmlA [Dickeya dadantii 3937]
gi|306527180|gb|ADM97110.1| Outer membrane lipoprotein OmlA [Dickeya dadantii 3937]
Length = 114
Score = 33.9 bits (76), Expect = 8.1, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + ++ + G ++ VI +LG+P + S ++YYV +++
Sbjct: 35 QGNYLAPADVAKIRNGMTKQQVIYTLGTPMLQ---DPFGSDTWYYVFRQQPGHEA----- 86
Query: 100 KIMEYIVLKITFGEKGVVSSVSM 122
++ L +TF +GV+++V
Sbjct: 87 --VKQQTLTLTFNSQGVLANVDN 107
>gi|213966667|ref|ZP_03394818.1| outer membrane lipoprotein OmlA [Pseudomonas syringae pv. tomato
T1]
gi|301383177|ref|ZP_07231595.1| outer membrane lipoprotein OmlA [Pseudomonas syringae pv. tomato
Max13]
gi|302063388|ref|ZP_07254929.1| outer membrane lipoprotein OmlA [Pseudomonas syringae pv. tomato
K40]
gi|302133761|ref|ZP_07259751.1| outer membrane lipoprotein OmlA [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213928517|gb|EEB62061.1| outer membrane lipoprotein OmlA [Pseudomonas syringae pv. tomato
T1]
gi|331016629|gb|EGH96685.1| outer membrane lipoprotein OmlA [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 173
Score = 33.9 bits (76), Expect = 8.1, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 24/67 (35%), Gaps = 6/67 (8%)
Query: 23 IIVIGLVVDYHVSYGSI------SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNG 76
+GL+ S+ + G + I + G +R V +G+P + +
Sbjct: 11 FTFVGLLALAGCSFPGVYKIDIQQGNVVTQDMIDQLRPGMTRRQVRFIMGNPLLTDTFHA 70
Query: 77 NRSQSFY 83
+R Y
Sbjct: 71 DRWDYLY 77
>gi|294636087|ref|ZP_06714517.1| conserved hypothetical protein [Edwardsiella tarda ATCC 23685]
gi|291090601|gb|EFE23162.1| conserved hypothetical protein [Edwardsiella tarda ATCC 23685]
Length = 112
Score = 33.9 bits (76), Expect = 8.2, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 4/80 (5%)
Query: 39 ISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLS 98
+ S LV + + V+ LG PSF H+ N +YY S K + +
Sbjct: 28 VQQFSAQQLGERLVPGKTHKREVLLLLGPPSFP--HDYNAGDLWYYHS-KSVGKALYLIV 84
Query: 99 PKIMEYIV-LKITFGEKGVV 117
P+ V L +TF +
Sbjct: 85 PRDYNREVTLTLTFNPDKTL 104
>gi|121634077|ref|YP_974322.1| putative outer membrane lipoprotein [Neisseria meningitidis FAM18]
gi|120865783|emb|CAM09512.1| putative outer membrane lipoprotein [Neisseria meningitidis FAM18]
gi|325133126|gb|EGC55798.1| lipoprotein, SmpA/OmlA family [Neisseria meningitidis M6190]
gi|325139094|gb|EGC61640.1| lipoprotein, SmpA/OmlA family [Neisseria meningitidis ES14902]
gi|325141215|gb|EGC63715.1| lipoprotein, SmpA/OmlA family [Neisseria meningitidis CU385]
gi|325143215|gb|EGC65555.1| lipoprotein, SmpA/OmlA family [Neisseria meningitidis 961-5945]
gi|325197489|gb|ADY92945.1| lipoprotein, SmpA/OmlA family [Neisseria meningitidis G2136]
Length = 125
Score = 33.9 bits (76), Expect = 8.2, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 46/127 (36%), Gaps = 16/127 (12%)
Query: 1 MKKILFLNNFFFGKLSFNKALFIIVIGLVVDYHVSYGSISGASLDMSAISLVSQGSSRSH 60
M K L L L A + + L Y + I G L+ A++ + G ++
Sbjct: 1 MNKTLIL---VLSALFSLTACSVERVSLFPSYKLKI--IQGNELEPRAVAALRPGMTKDQ 55
Query: 61 VIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSPKIMEYIVLKITFGEKGVVSSV 120
V+ LGSP + +R + S+ I E L + F E GV+
Sbjct: 56 VLLLLGSPMLRDAFHTDRWDYTFNTSRNGI----------IKERSNLTVYF-ENGVLVRA 104
Query: 121 SMERLPN 127
+ L N
Sbjct: 105 EGDALQN 111
>gi|172059632|ref|YP_001807284.1| SmpA/OmlA domain-containing protein [Burkholderia ambifaria MC40-6]
gi|171992149|gb|ACB63068.1| SmpA/OmlA domain protein [Burkholderia ambifaria MC40-6]
Length = 265
Score = 33.9 bits (76), Expect = 8.3, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 31/83 (37%), Gaps = 9/83 (10%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + + + G +R V LG+P + + + +R +Y +
Sbjct: 36 ITVVQGNFVSQEKAAQLQAGMTREQVRALLGTPLLADMFHADRWDYLFYFKRG------- 88
Query: 96 FLSPKIMEYIVLKITFGEKGVVS 118
S +++ L +TF + S
Sbjct: 89 --STSVVQQRDLVLTFASDRLAS 109
>gi|28871643|ref|NP_794262.1| outer membrane lipoprotein OmlA [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28854895|gb|AAO57957.1| outer membrane lipoprotein OmlA [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 173
Score = 33.9 bits (76), Expect = 8.3, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 24/67 (35%), Gaps = 6/67 (8%)
Query: 23 IIVIGLVVDYHVSYGSI------SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNG 76
+GL+ S+ + G + I + G +R V +G+P + +
Sbjct: 11 FTFVGLLALAGCSFPGVYKIDIQQGNVVTQDMIDQLRPGMTRRQVRFIMGNPLLTDTFHA 70
Query: 77 NRSQSFY 83
+R Y
Sbjct: 71 DRWDYLY 77
>gi|71735063|ref|YP_276330.1| outer membrane lipoprotein OmlA [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257482282|ref|ZP_05636323.1| outer membrane lipoprotein OmlA [Pseudomonas syringae pv. tabaci
ATCC 11528]
gi|289626207|ref|ZP_06459161.1| outer membrane lipoprotein OmlA [Pseudomonas syringae pv. aesculi
str. NCPPB3681]
gi|289646942|ref|ZP_06478285.1| outer membrane lipoprotein OmlA [Pseudomonas syringae pv. aesculi
str. 2250]
gi|298488437|ref|ZP_07006468.1| Outer membrane lipoprotein OmlA [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|71555616|gb|AAZ34827.1| outer membrane lipoprotein OmlA [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|298157062|gb|EFH98151.1| Outer membrane lipoprotein OmlA [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|320322547|gb|EFW78640.1| outer membrane lipoprotein OmlA [Pseudomonas syringae pv.
glycinea str. B076]
gi|320329984|gb|EFW85971.1| outer membrane lipoprotein OmlA [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330868227|gb|EGH02936.1| outer membrane lipoprotein OmlA [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330875243|gb|EGH09392.1| outer membrane lipoprotein OmlA [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330888679|gb|EGH21340.1| outer membrane lipoprotein OmlA [Pseudomonas syringae pv. mori
str. 301020]
gi|330987036|gb|EGH85139.1| outer membrane lipoprotein OmlA [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331011479|gb|EGH91535.1| outer membrane lipoprotein OmlA [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 173
Score = 33.9 bits (76), Expect = 8.3, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 24/67 (35%), Gaps = 6/67 (8%)
Query: 23 IIVIGLVVDYHVSYGSI------SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNG 76
+GL+ S+ + G + I + G +R V +G+P + +
Sbjct: 11 FTFVGLLALAGCSFPGVYKIDIQQGNVVTQDMIDQLRPGMTRRQVRFIMGNPLLTDTFHS 70
Query: 77 NRSQSFY 83
+R Y
Sbjct: 71 DRWDYLY 77
>gi|122088304|emb|CAL11095.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 116
Score = 33.9 bits (76), Expect = 8.3, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + S + +G ++ V +LG+P + +++++YV +++
Sbjct: 37 QGNYLSPNDASKIHKGMTQQQVAYTLGTPMLQ---DPFGTKTWFYVFRQQPGH------- 86
Query: 100 KIMEYIVLKITFGEKGVVSSVSM 122
+ + L +TF GV++ +
Sbjct: 87 EKVTQQTLTLTFDSSGVLTDIKN 109
>gi|302185413|ref|ZP_07262086.1| outer membrane lipoprotein OmlA [Pseudomonas syringae pv.
syringae 642]
Length = 173
Score = 33.5 bits (75), Expect = 8.4, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 24/67 (35%), Gaps = 6/67 (8%)
Query: 23 IIVIGLVVDYHVSYGSI------SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNG 76
+GL+ S+ + G + I + G +R V +G+P + +
Sbjct: 11 FTFVGLLALAGCSFPGVYKIDIQQGNVVTQDMIDQLRPGMTRRQVRFIMGNPLLTDTFHA 70
Query: 77 NRSQSFY 83
+R Y
Sbjct: 71 DRWDYLY 77
>gi|66047426|ref|YP_237267.1| SmpA/OmlA [Pseudomonas syringae pv. syringae B728a]
gi|63258133|gb|AAY39229.1| SmpA/OmlA [Pseudomonas syringae pv. syringae B728a]
gi|330969632|gb|EGH69698.1| SmpA/OmlA [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 173
Score = 33.5 bits (75), Expect = 8.5, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 24/67 (35%), Gaps = 6/67 (8%)
Query: 23 IIVIGLVVDYHVSYGSI------SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNG 76
+GL+ S+ + G + I + G +R V +G+P + +
Sbjct: 11 FTFVGLLALAGCSFPGVYKIDIQQGNVVTQDMIDQLRPGMTRRQVRFIMGNPLLTDTFHS 70
Query: 77 NRSQSFY 83
+R Y
Sbjct: 71 DRWDYLY 77
>gi|155183316|gb|ABT17078.1| outer membrane lipoprotein OmlA [Pseudomonas syringae pv. tabaci]
Length = 162
Score = 33.5 bits (75), Expect = 8.5, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 24/67 (35%), Gaps = 6/67 (8%)
Query: 23 IIVIGLVVDYHVSYGSI------SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNG 76
+GL+ S+ + G + I + G +R V +G+P + +
Sbjct: 11 FTFVGLLALAGCSFPGVYKIDIQQGNVVTQDMIDQLRPGMTRRQVRFIMGNPLLTDTFHS 70
Query: 77 NRSQSFY 83
+R Y
Sbjct: 71 DRWDYLY 77
>gi|149190062|ref|ZP_01868339.1| small protein A [Vibrio shilonii AK1]
gi|148836092|gb|EDL53052.1| small protein A [Vibrio shilonii AK1]
Length = 119
Score = 33.5 bits (75), Expect = 8.7, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 14/84 (16%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWF--PVKFL 97
G ++ +A+ + G ++ V LGSP +L ++YY+ K PV
Sbjct: 34 QGNFVEQTAVEQLRFGMTKEQVRFVLGSP---MLIENGYPNTWYYIYHATKGHDDPV--- 87
Query: 98 SPKIMEYIVLKITFGEKGVVSSVS 121
L F G ++S+S
Sbjct: 88 ------QRNLVANFDATGTLTSIS 105
>gi|254253259|ref|ZP_04946577.1| Small protein A (tmRNA-binding) [Burkholderia dolosa AUO158]
gi|124895868|gb|EAY69748.1| Small protein A (tmRNA-binding) [Burkholderia dolosa AUO158]
Length = 287
Score = 33.5 bits (75), Expect = 8.8, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 9/91 (9%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + S + G +R V LG+P + + + +R +Y +
Sbjct: 52 ITVVQGNFVSQEKASQLQAGMTRDQVRALLGTPLLADMFHADRWDYLFYFKRG------- 104
Query: 96 FLSPKIMEYIVLKITFGEKGVVSSVSMERLP 126
S +++ L +TF + S E LP
Sbjct: 105 --STSVVQQRDLVLTFAGDRLASWTGAENLP 133
>gi|330981069|gb|EGH79172.1| outer membrane lipoprotein OmlA [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 173
Score = 33.5 bits (75), Expect = 8.9, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 24/67 (35%), Gaps = 6/67 (8%)
Query: 23 IIVIGLVVDYHVSYGSI------SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNG 76
+GL+ S+ + G + I + G +R V +G+P + +
Sbjct: 11 FTFVGLLALAGCSFPGVYKIDIQQGNVVTQDMIDQLRPGMTRRQVRFIMGNPLLTDTFHS 70
Query: 77 NRSQSFY 83
+R Y
Sbjct: 71 DRWDYLY 77
>gi|115350599|ref|YP_772438.1| SmpA/OmlA domain-containing protein [Burkholderia ambifaria AMMD]
gi|115280587|gb|ABI86104.1| SmpA/OmlA domain protein [Burkholderia ambifaria AMMD]
Length = 265
Score = 33.5 bits (75), Expect = 9.0, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 31/83 (37%), Gaps = 9/83 (10%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + + + G +R V LG+P + + + +R +Y +
Sbjct: 36 ITVVQGNFVSQEKAAQLQAGMTREQVRALLGTPLLADMFHADRWDYLFYFKRG------- 88
Query: 96 FLSPKIMEYIVLKITFGEKGVVS 118
S +++ L +TF + S
Sbjct: 89 --STSVVQQRDLVLTFASDRLAS 109
>gi|330877252|gb|EGH11401.1| outer membrane lipoprotein OmlA [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330963956|gb|EGH64216.1| outer membrane lipoprotein OmlA [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 173
Score = 33.5 bits (75), Expect = 9.0, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 24/67 (35%), Gaps = 6/67 (8%)
Query: 23 IIVIGLVVDYHVSYGSI------SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNG 76
+GL+ S+ + G + I + G +R V +G+P + +
Sbjct: 11 FTFVGLLALAGCSFPGVYKIDIQQGNVVTQDMIDQLRPGMTRRQVRFIMGNPLLTDTFHA 70
Query: 77 NRSQSFY 83
+R Y
Sbjct: 71 DRWDYLY 77
>gi|318606819|emb|CBY28317.1| outer membrane lipoprotein SmpA, a component of the essential YaeT
outer-membrane protein assembly complex [Yersinia
enterocolitica subsp. palearctica Y11]
Length = 113
Score = 33.5 bits (75), Expect = 9.2, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + S + +G ++ V +LG+P + +++++YV +++
Sbjct: 34 QGNYLSPNDASKIHKGMTQQQVAYTLGTPMLQ---DPFGTKTWFYVFRQQPGH------- 83
Query: 100 KIMEYIVLKITFGEKGVVSSVSM 122
+ + L +TF GV++ +
Sbjct: 84 EKVTQQTLTLTFDSSGVLTDIKN 106
>gi|213963010|ref|ZP_03391269.1| hypothetical protein CAPSP0001_1661 [Capnocytophaga sputigena
Capno]
gi|213954351|gb|EEB65674.1| hypothetical protein CAPSP0001_1661 [Capnocytophaga sputigena
Capno]
Length = 270
Score = 33.5 bits (75), Expect = 9.2, Method: Composition-based stats.
Identities = 11/83 (13%), Positives = 26/83 (31%), Gaps = 12/83 (14%)
Query: 81 SFYYVSQKKKWFPVKFLSPKIMEYIVLKI-----------TFGEKGVVSSVSMERL-PNR 128
+ Y ++ F ++ V + F + G V+ L ++
Sbjct: 185 VYTYDAKGNTIEKQVFDKDNNLKQRVTSVFDENNNETEVKYFDKDGNVTKTESYTLVYDK 244
Query: 129 RFNPNPHTIPAPIQTADGFLRRL 151
+ N T+ + L++L
Sbjct: 245 KKNWIKKTMSVDGKPTMILLQKL 267
>gi|317491002|ref|ZP_07949438.1| SmpA/OmlA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316920549|gb|EFV41872.1| SmpA/OmlA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 112
Score = 33.5 bits (75), Expect = 9.3, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + ++ + +G ++ V +LG+P + + +++YV +++
Sbjct: 30 QGNYLTAADVAKIHRGMTQQQVAYTLGTPMLQ---DPFGTSTWFYVFRQQPGHEA----- 81
Query: 100 KIMEYIVLKITFGEKGVVSSVSM 122
+ L +TF GV++++
Sbjct: 82 --VTQETLTLTFDGSGVLTNIEN 102
>gi|16761537|ref|NP_457154.1| hypothetical protein STY2871 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16766000|ref|NP_461615.1| hypothetical protein STM2685 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|29143008|ref|NP_806350.1| hypothetical protein t2639 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|62181255|ref|YP_217672.1| hypothetical protein SC2685 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161615615|ref|YP_001589580.1| hypothetical protein SPAB_03398 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167553514|ref|ZP_02347263.1| small protein A [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|167992465|ref|ZP_02573563.1| small protein A [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168234208|ref|ZP_02659266.1| small protein A [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|168239455|ref|ZP_02664513.1| small protein A [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|168244708|ref|ZP_02669640.1| small protein A [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|168262142|ref|ZP_02684115.1| small protein A [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|168464142|ref|ZP_02698059.1| small protein A [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|168823038|ref|ZP_02835038.1| small protein A [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|194442207|ref|YP_002041946.1| hypothetical protein SNSL254_A2898 [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194449535|ref|YP_002046688.1| hypothetical protein SeHA_C2900 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194472077|ref|ZP_03078061.1| small protein A [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194737236|ref|YP_002115694.1| hypothetical protein SeSA_A2880 [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197250284|ref|YP_002147620.1| hypothetical protein SeAg_B2830 [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197266039|ref|ZP_03166113.1| small protein A [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|198244135|ref|YP_002216693.1| hypothetical protein SeD_A3012 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200386606|ref|ZP_03213218.1| small protein A [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|204929693|ref|ZP_03220767.1| small protein A [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|205353721|ref|YP_002227522.1| hypothetical protein SG2662 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207858032|ref|YP_002244683.1| hypothetical protein SEN2605 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|213028002|ref|ZP_03342449.1| hypothetical protein Salmonelentericaenterica_39100 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
gi|213052724|ref|ZP_03345602.1| hypothetical protein Salmoneentericaenterica_07291 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213416791|ref|ZP_03349935.1| hypothetical protein Salmonentericaenterica_01962 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
gi|213424855|ref|ZP_03357605.1| hypothetical protein SentesTyphi_03606 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213582087|ref|ZP_03363913.1| hypothetical protein SentesTyph_13174 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213647049|ref|ZP_03377102.1| hypothetical protein SentesTy_06900 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213858004|ref|ZP_03384975.1| hypothetical protein SentesT_23185 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|224584536|ref|YP_002638334.1| hypothetical protein SPC_2795 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238909527|ref|ZP_04653364.1| hypothetical protein SentesTe_00120 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|289804838|ref|ZP_06535467.1| hypothetical protein Salmonellaentericaenterica_10372 [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
gi|25355715|pir||AH0834 small protein A [imported] - Salmonella enterica subsp. enterica
serovar Typhi (strain CT18)
gi|16421232|gb|AAL21574.1| small membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|16503838|emb|CAD05863.1| small protein A [Salmonella enterica subsp. enterica serovar Typhi]
gi|29138641|gb|AAO70210.1| small protein A [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|62128888|gb|AAX66591.1| small membrane protein A [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161364979|gb|ABX68747.1| hypothetical protein SPAB_03398 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194400870|gb|ACF61092.1| small protein A [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194407839|gb|ACF68058.1| small protein A [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194458441|gb|EDX47280.1| small protein A [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194712738|gb|ACF91959.1| small protein A [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|195633389|gb|EDX51803.1| small protein A [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|197213987|gb|ACH51384.1| small protein A [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|197244294|gb|EDY26914.1| small protein A [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197287845|gb|EDY27233.1| small protein A [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|197938651|gb|ACH75984.1| small protein A [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|199603704|gb|EDZ02249.1| small protein A [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|204321412|gb|EDZ06612.1| small protein A [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|205273502|emb|CAR38479.1| small protein A [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205322068|gb|EDZ09907.1| small protein A [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|205329284|gb|EDZ16048.1| small protein A [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205331823|gb|EDZ18587.1| small protein A [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|205336478|gb|EDZ23242.1| small protein A [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|205340653|gb|EDZ27417.1| small protein A [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205349210|gb|EDZ35841.1| small protein A [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|206709835|emb|CAR34187.1| small protein A [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|224469063|gb|ACN46893.1| small membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261247875|emb|CBG25705.1| small protein A [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267994828|gb|ACY89713.1| hypothetical protein STM14_3290 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301159244|emb|CBW18759.1| small protein A [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312913707|dbj|BAJ37681.1| hypothetical protein STMDT12_C27380 [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320087162|emb|CBY96929.1| Small protein A Flags: Precursor [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321223476|gb|EFX48541.1| Outer membrane lipoprotein SmpA [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|322614468|gb|EFY11399.1| hypothetical protein SEEM315_04485 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322621467|gb|EFY18320.1| hypothetical protein SEEM971_08263 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322624328|gb|EFY21161.1| hypothetical protein SEEM973_03148 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629373|gb|EFY26151.1| hypothetical protein SEEM974_01750 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322633613|gb|EFY30355.1| hypothetical protein SEEM201_14305 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322638344|gb|EFY35042.1| hypothetical protein SEEM202_07607 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322639782|gb|EFY36465.1| hypothetical protein SEEM954_08265 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322647357|gb|EFY43853.1| hypothetical protein SEEM054_11071 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322650474|gb|EFY46884.1| hypothetical protein SEEM675_19053 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322656033|gb|EFY52333.1| hypothetical protein SEEM965_01142 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322661427|gb|EFY57652.1| hypothetical protein SEEM19N_07327 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322662627|gb|EFY58835.1| hypothetical protein SEEM801_09539 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322667000|gb|EFY63175.1| hypothetical protein SEEM507_16741 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322671369|gb|EFY67492.1| hypothetical protein SEEM877_11639 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322677624|gb|EFY73687.1| hypothetical protein SEEM867_00182 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322681550|gb|EFY77580.1| hypothetical protein SEEM180_01967 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322683950|gb|EFY79960.1| hypothetical protein SEEM600_08423 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|322715741|gb|EFZ07312.1| Small protein A [Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
gi|323131028|gb|ADX18458.1| small membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|323195519|gb|EFZ80697.1| hypothetical protein SEEM581_20443 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323197892|gb|EFZ83015.1| hypothetical protein SEEM501_05141 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323203070|gb|EFZ88102.1| hypothetical protein SEEM460_17031 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323205311|gb|EFZ90286.1| hypothetical protein SEEM020_09915 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323210539|gb|EFZ95423.1| hypothetical protein SEEM6152_21207 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323218180|gb|EGA02892.1| hypothetical protein SEEM0077_20515 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323221554|gb|EGA05967.1| hypothetical protein SEEM0047_00115 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323223774|gb|EGA08079.1| hypothetical protein SEEM0055_14203 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323230943|gb|EGA15061.1| hypothetical protein SEEM0052_21834 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323234705|gb|EGA18791.1| hypothetical protein SEEM3312_04148 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323238744|gb|EGA22794.1| hypothetical protein SEEM5258_04025 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323241444|gb|EGA25475.1| hypothetical protein SEEM1156_04633 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323246859|gb|EGA30826.1| outer membrane biogenesis protein BamE [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323253258|gb|EGA37088.1| outer membrane biogenesis protein BamE [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323257054|gb|EGA40763.1| outer membrane biogenesis protein BamE [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323260473|gb|EGA44084.1| hypothetical protein SEEM8284_17273 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323264470|gb|EGA47976.1| outer membrane biogenesis protein BamE [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269605|gb|EGA53058.1| outer membrane biogenesis protein BamE [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|326624450|gb|EGE30795.1| SmpA/OmlA domain containing protein [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
gi|326628827|gb|EGE35170.1| SmpA / OmlA family lipoprotein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|332989609|gb|AEF08592.1| hypothetical protein STMUK_2720 [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 112
Score = 33.5 bits (75), Expect = 9.3, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 32/83 (38%), Gaps = 10/83 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + ++ V G ++ V +LG+P + + FY Q+ V
Sbjct: 34 QGNYLTPTDVAKVRVGMTQQQVAYALGTPMMTDPF--GTNTWFYVFRQQPGHENVT---- 87
Query: 100 KIMEYIVLKITFGEKGVVSSVSM 122
L +TF GV++++
Sbjct: 88 ----QQTLTLTFNSSGVLTNIDN 106
>gi|256823660|ref|YP_003147623.1| SmpA/OmlA domain-containing protein [Kangiella koreensis DSM
16069]
gi|256797199|gb|ACV27855.1| SmpA/OmlA domain protein [Kangiella koreensis DSM 16069]
Length = 106
Score = 33.5 bits (75), Expect = 9.6, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYV-----SQKKKWFPV 94
G L+ S ++ + G ++ + LG+P+ + + + YY+ ++++ +
Sbjct: 27 QGNILEQSEVNKIKPGMTKDQISYVLGNPALNTNLDSDTWYYLYYMVPSKGDRREERLIL 86
Query: 95 KF 96
F
Sbjct: 87 HF 88
>gi|260598995|ref|YP_003211566.1| outer membrane biogenesis protein BamE [Cronobacter turicensis
z3032]
gi|260218172|emb|CBA33016.1| Small protein A [Cronobacter turicensis z3032]
Length = 114
Score = 33.5 bits (75), Expect = 9.7, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 10/83 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + I+ + G ++ V +LG+P + N FY Q+ V
Sbjct: 34 QGNYLTPTDIAKIRIGMTQQQVAYALGTPMMTDPFGSNTW--FYVFRQQPGHQDVT---- 87
Query: 100 KIMEYIVLKITFGEKGVVSSVSM 122
L +TF GV++++
Sbjct: 88 ----QQTLTLTFNSNGVLTNMDN 106
>gi|170695372|ref|ZP_02886518.1| SmpA/OmlA domain protein [Burkholderia graminis C4D1M]
gi|170139772|gb|EDT07954.1| SmpA/OmlA domain protein [Burkholderia graminis C4D1M]
Length = 276
Score = 33.5 bits (75), Expect = 9.8, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 35/91 (38%), Gaps = 9/91 (9%)
Query: 36 YGSISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVK 95
+ G + A S + G SR+ V + LG+P + + + +R +Y +
Sbjct: 36 ITVVQGNFVSKEAASQMQVGMSRAQVRQLLGTPLLADMFHADRWDYVFYFKRG------- 88
Query: 96 FLSPKIMEYIVLKITFGEKGVVSSVSMERLP 126
S +++ + F V S E LP
Sbjct: 89 --STNVVQQRDFIVLFAGDRVASWSGGEDLP 117
>gi|161936222|ref|YP_151725.2| hypothetical protein SPA2544 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
Length = 112
Score = 33.5 bits (75), Expect = 9.8, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 32/83 (38%), Gaps = 10/83 (12%)
Query: 40 SGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWFPVKFLSP 99
G L + ++ V G ++ V +LG+P + + FY Q+ V
Sbjct: 34 QGNYLTPTDVAKVRVGMTQQQVAYALGTPMMTDPF--GTNTWFYVFRQQPGHENVT---- 87
Query: 100 KIMEYIVLKITFGEKGVVSSVSM 122
L +TF GV++++
Sbjct: 88 ----QQTLTLTFNSSGVLTNIDN 106
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.311 0.130 0.326
Lambda K H
0.267 0.0398 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,648,738,227
Number of Sequences: 14124377
Number of extensions: 95534172
Number of successful extensions: 248951
Number of sequences better than 10.0: 557
Number of HSP's better than 10.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 474
Number of HSP's that attempted gapping in prelim test: 248349
Number of HSP's gapped (non-prelim): 719
length of query: 159
length of database: 4,842,793,630
effective HSP length: 121
effective length of query: 38
effective length of database: 3,133,744,013
effective search space: 119082272494
effective search space used: 119082272494
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 75 (33.5 bits)