Query gi|254780501|ref|YP_003064914.1| hypothetical protein CLIBASIA_01940 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 31
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Wed Jun 1 09:52:31 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780501.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1gg3a2 b.55.1.5 (A:188-279) E 21.7 17 0.0012 17.2 1.4 22 10-31 25-46 (92)
2 d1ef1a3 d.15.1.4 (A:4-87) Moes 9.3 51 0.0037 15.0 1.1 10 1-10 39-48 (84)
3 d2fnaa1 a.4.5.11 (A:284-356) H 8.7 9.7 0.00071 18.3 -2.8 15 13-29 13-27 (73)
4 d1gg3a3 d.15.1.4 (A:1-81) Eryt 5.0 70 0.0051 14.4 -0.0 10 1-10 39-48 (81)
5 d1opsa_ b.85.1.1 (A:) Type III 4.5 1.2E+02 0.0086 13.3 0.9 14 16-29 49-62 (64)
6 d1qopa_ c.1.2.4 (A:) Trp synth 4.3 1.3E+02 0.0094 13.2 0.9 17 5-22 172-188 (267)
7 d1vk3a4 d.139.1.1 (A:508-603) 4.2 82 0.006 14.1 -0.2 10 19-28 21-30 (96)
8 d1s7ia_ d.58.4.9 (A:) Hypothet 4.1 1.4E+02 0.01 13.0 1.0 13 1-13 7-19 (124)
9 d1ujpa_ c.1.2.4 (A:) Trp synth 3.4 1.3E+02 0.0098 13.1 0.4 17 5-22 169-185 (271)
10 d1geqa_ c.1.2.4 (A:) Trp synth 3.2 2E+02 0.014 12.3 1.1 15 5-20 158-172 (248)
No 1
>d1gg3a2 b.55.1.5 (A:188-279) Erythroid membrane protein 4.1R {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.73 E-value=17 Score=17.17 Aligned_cols=22 Identities=14% Similarity=0.297 Sum_probs=16.5
Q ss_pred EEECCCCCCCEEEHHHHHCCCC
Q ss_conf 7513588651120325403779
Q gi|254780501|r 10 NIAQKGSTGSRILWEEIKNASF 31 (31)
Q Consensus 10 niaqkgstgsrilweeiknasf 31 (31)
.|-+.+..-+++.|.+|++.||
T Consensus 25 ~vy~~~~~i~~f~W~~I~~isf 46 (92)
T d1gg3a2 25 LVYKDKLRINRFPWPKVLKISY 46 (92)
T ss_dssp EEESSSCCCEEEEGGGCCEEEE
T ss_pred EEEECCCEEEEEEHHHEEEEEE
T ss_conf 9997998888886578679866
No 2
>d1ef1a3 d.15.1.4 (A:4-87) Moesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.27 E-value=51 Score=15.00 Aligned_cols=10 Identities=40% Similarity=0.910 Sum_probs=8.0
Q ss_pred CCEEEEEEEE
Q ss_conf 9455799997
Q gi|254780501|r 1 MKYFGLIYLN 10 (31)
Q Consensus 1 mkyfgliyln 10 (31)
+.||||-|.+
T Consensus 39 ~dYFGL~y~d 48 (84)
T d1ef1a3 39 VWFFGLQYQD 48 (84)
T ss_dssp GGGEEEEEEB
T ss_pred CCCCEEEEEC
T ss_conf 5644189999
No 3
>d2fnaa1 a.4.5.11 (A:284-356) Hypothetical protein SSO1545, C-terminal domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=8.73 E-value=9.7 Score=18.25 Aligned_cols=15 Identities=27% Similarity=0.594 Sum_probs=9.3
Q ss_pred CCCCCCCEEEHHHHHCC
Q ss_conf 35886511203254037
Q gi|254780501|r 13 QKGSTGSRILWEEIKNA 29 (31)
Q Consensus 13 qkgstgsrilweeikna 29 (31)
..-+-|+| |.+||+.
T Consensus 13 kaia~G~r--Ws~IK~y 27 (73)
T d2fnaa1 13 RTLSKCGK--WSDVKRA 27 (73)
T ss_dssp HHHTTCBC--HHHHHHH
T ss_pred HHHHCCCC--HHHHHHH
T ss_conf 99984496--9999999
No 4
>d1gg3a3 d.15.1.4 (A:1-81) Erythroid membrane protein 4.1R {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.98 E-value=70 Score=14.37 Aligned_cols=10 Identities=40% Similarity=0.796 Sum_probs=8.0
Q ss_pred CCEEEEEEEE
Q ss_conf 9455799997
Q gi|254780501|r 1 MKYFGLIYLN 10 (31)
Q Consensus 1 mkyfgliyln 10 (31)
+.||||-|.+
T Consensus 39 ~~YFGL~y~d 48 (81)
T d1gg3a3 39 EDYFGLAIWD 48 (81)
T ss_dssp CCSSSCEEEC
T ss_pred CCCCEEEEEC
T ss_conf 3432189978
No 5
>d1opsa_ b.85.1.1 (A:) Type III antifreeze protein, AFP III {Ocean pout (Macrozoarces americanus), different isoforms [TaxId: 8199]}
Probab=4.52 E-value=1.2e+02 Score=13.34 Aligned_cols=14 Identities=14% Similarity=0.285 Sum_probs=10.7
Q ss_pred CCCCEEEHHHHHCC
Q ss_conf 86511203254037
Q gi|254780501|r 16 STGSRILWEEIKNA 29 (31)
Q Consensus 16 stgsrilweeikna 29 (31)
..+..|+|+.+||-
T Consensus 49 ~~d~~L~~d~ik~~ 62 (64)
T d1opsa_ 49 AKGQTLMPNMVKTY 62 (64)
T ss_dssp CTTCBCCGGGBTTT
T ss_pred CCCCCCCHHHHHCC
T ss_conf 69885189994122
No 6
>d1qopa_ c.1.2.4 (A:) Trp synthase alpha-subunit {Salmonella typhimurium [TaxId: 90371]}
Probab=4.26 E-value=1.3e+02 Score=13.17 Aligned_cols=17 Identities=35% Similarity=0.677 Sum_probs=12.6
Q ss_pred EEEEEEEECCCCCCCEEE
Q ss_conf 799997513588651120
Q gi|254780501|r 5 GLIYLNIAQKGSTGSRIL 22 (31)
Q Consensus 5 gliylniaqkgstgsril 22 (31)
|.||+ +++.|-||+|-.
T Consensus 172 gFiY~-vs~~GvTG~~~~ 188 (267)
T d1qopa_ 172 GYTYL-LSRSGVTGAENR 188 (267)
T ss_dssp SCEEE-ESSSSCCCSSSC
T ss_pred HHHHH-HCCCCCCCCCCC
T ss_conf 35565-103356775323
No 7
>d1vk3a4 d.139.1.1 (A:508-603) Phosphoribosylformylglycinamidine synthase II, domains 2 and 4 {Thermotoga maritima [TaxId: 2336]}
Probab=4.17 E-value=82 Score=14.05 Aligned_cols=10 Identities=30% Similarity=0.876 Sum_probs=6.8
Q ss_pred CEEEHHHHHC
Q ss_conf 1120325403
Q gi|254780501|r 19 SRILWEEIKN 28 (31)
Q Consensus 19 srilweeikn 28 (31)
..+||.||+.
T Consensus 21 EK~LW~eI~K 30 (96)
T d1vk3a4 21 EKELWRAIRK 30 (96)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
T ss_conf 9999999999
No 8
>d1s7ia_ d.58.4.9 (A:) Hypothetical protein PA1349 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=4.15 E-value=1.4e+02 Score=13.00 Aligned_cols=13 Identities=54% Similarity=0.935 Sum_probs=10.3
Q ss_pred CCEEEEEEEEEEC
Q ss_conf 9455799997513
Q gi|254780501|r 1 MKYFGLIYLNIAQ 13 (31)
Q Consensus 1 mkyfgliylniaq 13 (31)
|||+-|+|-|-..
T Consensus 7 Mkyllli~~~~~~ 19 (124)
T d1s7ia_ 7 MKYLCLIYFDEAK 19 (124)
T ss_dssp EEEEEEEEECGGG
T ss_pred CCEEEEEEECCCC
T ss_conf 7179999968333
No 9
>d1ujpa_ c.1.2.4 (A:) Trp synthase alpha-subunit {Thermus thermophilus [TaxId: 274]}
Probab=3.42 E-value=1.3e+02 Score=13.08 Aligned_cols=17 Identities=35% Similarity=0.671 Sum_probs=12.1
Q ss_pred EEEEEEEECCCCCCCEEE
Q ss_conf 799997513588651120
Q gi|254780501|r 5 GLIYLNIAQKGSTGSRIL 22 (31)
Q Consensus 5 gliylniaqkgstgsril 22 (31)
|.||+ ++..|.||+|-.
T Consensus 169 GFIY~-Vs~~GvTG~~~~ 185 (271)
T d1ujpa_ 169 GFVYA-VSVTGVTGMRER 185 (271)
T ss_dssp SCEEE-ECC---------
T ss_pred CHHHH-HCCCCCCCCCCC
T ss_conf 12112-035676675433
No 10
>d1geqa_ c.1.2.4 (A:) Trp synthase alpha-subunit {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=3.21 E-value=2e+02 Score=12.34 Aligned_cols=15 Identities=47% Similarity=1.043 Sum_probs=0.0
Q ss_pred EEEEEEEECCCCCCCE
Q ss_conf 7999975135886511
Q gi|254780501|r 5 GLIYLNIAQKGSTGSR 20 (31)
Q Consensus 5 gliylniaqkgstgsr 20 (31)
|.||+ +...|-||+|
T Consensus 158 gFiY~-vs~~GvTG~~ 172 (248)
T d1geqa_ 158 GFVYL-VSLYGTTGAR 172 (248)
T ss_dssp SEEEE-ECCC------
T ss_pred CEEEE-EECCCCCCCC
T ss_conf 72899-8414665420
Done!